BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAC22h02.sg.3.6
(2204 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX170376.1|CX170376 G06_69-49_14.ab1 leaf inoculated wit... 153 3e-035
gb|CX175421.1|CX175421 A08_69-25_02.ab1 leaf inoculated wit... 153 3e-035
gb|CX179193.1|CX179193 E08_45-78_10.ab1 leaf inoculated wit... 153 3e-035
gb|CX184662.1|CX184662 A11_45-118_01.ab1 leaf inoculated wi... 153 3e-035
gb|CX187327.1|CX187327 G03_45-27_13.ab1 leaf inoculated wit... 153 3e-035
gb|BU875211.1|BU875211 V003F03 Populus flower cDNA library ... 145 8e-033
gb|CX177485.1|CX177485 B03_45-58_03.ab1 leaf inoculated wit... 145 8e-033
gb|CX182624.1|CX182624 E05_45-33_09.ab1 leaf inoculated wit... 145 8e-033
gb|CX183629.1|CX183629 G12_45-115_14.ab1 leaf inoculated wi... 145 8e-033
gb|DN496876.1|DN496876 Q021E04.5pR Populus dormant bud cDNA... 137 2e-030
gb|BU863114.1|BU863114 S024B09 Populus imbibed seed cDNA li... 135 8e-030
gb|BU884976.1|BU884976 R018G11 Populus root cDNA library Po... 135 8e-030
gb|BU898052.1|BU898052 X073H12 Populus wood cDNA library Po... 135 8e-030
gb|CA823921.1|CA823921 R33E05 two-month-old roots from clon... 123 3e-026
gb|CV236411.1|CV236411 WS01224.B21.1_A03 PT-GT-FL-A-3 Popul... 123 3e-026
gb|CX177619.1|CX177619 G08_45-98_14.ab1 leaf inoculated wit... 123 3e-026
gb|CX182511.1|CX182511 D12_45-33_08.ab1 leaf inoculated wit... 123 3e-026
gb|CX184134.1|CX184134 E04_45-55_10.ab1 leaf inoculated wit... 123 3e-026
gb|CX186999.1|CX186999 F04_45-25_12.ab1 leaf inoculated wit... 123 3e-026
gb|CX180084.1|CX180084 D06_45-32_08.ab1 leaf inoculated wit... 115 7e-024
gb|CB185045.1|CB185045 PopSC00181 Poplar SC cDNA library Po... 111 1e-022
gb|AJ770295.1|AJ770295 AJ770295 Populus euphratica leaf 3-6... 109 5e-022
gb|AJ770702.1|AJ770702 AJ770702 Populus euphratica leaf 3-6... 109 5e-022
gb|AJ769987.1|AJ769987 AJ769987 Populus euphratica leaf 3-6... 105 7e-021
gb|AJ770296.1|AJ770296 AJ770296 Populus euphratica leaf 3-6... 105 7e-021
gb|CX174648.1|CX174648 H07_69-1_15.ab1 leaf inoculated with... 105 7e-021
gb|BU879499.1|BU879499 V061A02 Populus flower cDNA library ... 100 4e-019
gb|CV243730.1|CV243730 WS0252.B21_L03 PT-MB-N-A-15 Populus ... 98 2e-018
gb|AJ772019.1|AJ772019 AJ772019 Populus euphratica root 3-6... 94 3e-017
gb|BP933870.1|BP933870 BP933870 full-length enriched poplar... 80 4e-013
gb|BU879968.1|BU879968 UM39TG07 Populus flower cDNA library... 74 3e-011
gb|BP930067.1|BP930067 BP930067 full-length enriched poplar... 74 3e-011
gb|BP926257.1|BP926257 BP926257 full-length enriched poplar... 72 1e-010
gb|BP922234.1|BP922234 BP922234 full-length enriched poplar... 64 2e-008
gb|CX657967.1|CX657967 PO01007E11 Poplar SC cDNA library Po... 58 2e-006
gb|CX659502.1|CX659502 PO01031D10 Poplar SC cDNA library Po... 58 2e-006
gb|BU868655.1|BU868655 M118E09 Populus flower cDNA library ... 56 6e-006
gb|DN502148.1|DN502148 V055D12.5pR Populus male catkins cDN... 54 2e-005
gb|DT479262.1|DT479262 WS02525.BR_E03 PT-MB-N-A-15 Populus ... 54 2e-005
gb|DT484382.1|DT484382 WS02525.B21_E03 PT-MB-N-A-15 Populus... 54 2e-005
gb|CX170506.1|CX170506 F04_69-78_12.ab1 leaf inoculated wit... 52 9e-005
gb|BP928952.1|BP928952 BP928952 full-length enriched poplar... 50 4e-004
gb|CB239728.1|CB239728 RSH15H04 two-month-old roots from cl... 48 0.001
gb|BP926297.1|BP926297 BP926297 full-length enriched poplar... 48 0.001
gb|CK089694.1|CK089694 C027P41.3pR Populus strain T89 leave... 44 0.023
gb|BU885070.1|BU885070 R020C04 Populus root cDNA library Po... 40 0.35
gb|DN487953.1|DN487953 R020C04.3pR Populus root cDNA librar... 40 0.35
gb|DN497629.1|DN497629 R020C04.5pR Populus root cDNA librar... 40 0.35
>gb|CX170376.1|CX170376 G06_69-49_14.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 675
Score = 153 bits (77), Expect = 3e-035
Identities = 257/317 (81%)
Strand = Plus / Plus
Query: 538 tgggagggggagttcttccccggcgtcccgaaaatcaagtatgagggtccaacaagcaag 597
||||| |||||||||||||| ||| | || ||||| ||||| ||||| || | ||||||
Sbjct: 174 tgggaaggggagttcttccctggcattcccaaaattaagtacgagggaccttctagcaag 233
Query: 598 aaccctcttgcttataagtggtataacaaggaggaagtgattctcggtaagaagatgaag 657
||||| || || | || |||||||| ||| |||| |||||| || ||||| ||||||
Sbjct: 234 aacccactagcattcaaatggtataatgcggaagaagagattcttgggaagaaaatgaag 293
Query: 658 gattggatgcgcttcagtgttgcgttctggcacacgttccgtggtactggcgctgatcct 717
||||||||| | |||||| |||| || |||||||| |||||||| || || | ||| ||
Sbjct: 294 gattggatgagattcagtattgcattttggcacacattccgtggaacaggaggtgacccc 353
Query: 718 ttcggtgctcctacaaagacttggccttgggaggacggcacaaattctttggccatggct 777
|| ||||| ||||| ||| |||||||||||| || || || ||||||||||| |||||
Sbjct: 354 tttggtgcgcctaccaagtattggccttgggaagatggaaccaattctttggctatggcc 413
Query: 778 aagagaagaatgagagctcactttgagttcatggagaagttgggagttgacaaatggtgc 837
|| || |||||||||||| | ||||||||| |||||||| | |||||||| | |||||
Sbjct: 414 aaaaggagaatgagagctaattttgagttcttggagaagattggagttgataggtggtgt 473
Query: 838 ttccatgacagggatat 854
|||||||| ||||||||
Sbjct: 474 ttccatgatagggatat 490
Score = 69.9 bits (35), Expect = 4e-010
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 952 ttgtggggtactgcacagctctttatgcatcctcgttacatgcatggcgctgctactag 1010
||||||||||| ||||| | |||||||||||||||||||||||||| | |||||||||
Sbjct: 585 ttgtggggtacagcacaattgtttatgcatcctcgttacatgcatggtggtgctactag 643
>gb|CX175421.1|CX175421 A08_69-25_02.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 685
Score = 153 bits (77), Expect = 3e-035
Identities = 257/317 (81%)
Strand = Plus / Plus
Query: 538 tgggagggggagttcttccccggcgtcccgaaaatcaagtatgagggtccaacaagcaag 597
||||| |||||||||||||| ||| | || ||||| ||||| ||||| || | ||||||
Sbjct: 83 tgggaaggggagttcttccctggcattcccaaaattaagtacgagggaccttctagcaag 142
Query: 598 aaccctcttgcttataagtggtataacaaggaggaagtgattctcggtaagaagatgaag 657
||||| || || | || |||||||| ||| |||| |||||| || ||||| ||||||
Sbjct: 143 aacccactagcattcaaatggtataatgcggaagaagagattcttgggaagaaaatgaag 202
Query: 658 gattggatgcgcttcagtgttgcgttctggcacacgttccgtggtactggcgctgatcct 717
||||||||| | |||||| |||| || |||||||| |||||||| || || | ||| ||
Sbjct: 203 gattggatgagattcagtattgcattttggcacacattccgtggaacaggaggtgacccc 262
Query: 718 ttcggtgctcctacaaagacttggccttgggaggacggcacaaattctttggccatggct 777
|| ||||| ||||| ||| |||||||||||| || || || ||||||||||| |||||
Sbjct: 263 tttggtgcgcctaccaagtattggccttgggaagatggaaccaattctttggctatggcc 322
Query: 778 aagagaagaatgagagctcactttgagttcatggagaagttgggagttgacaaatggtgc 837
|| || |||||||||||| | ||||||||| |||||||| | |||||||| | |||||
Sbjct: 323 aaaaggagaatgagagctaattttgagttcttggagaagattggagttgataggtggtgt 382
Query: 838 ttccatgacagggatat 854
|||||||| ||||||||
Sbjct: 383 ttccatgatagggatat 399
Score = 69.9 bits (35), Expect = 4e-010
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 952 ttgtggggtactgcacagctctttatgcatcctcgttacatgcatggcgctgctactag 1010
||||||||||| ||||| | |||||||||||||||||||||||||| | |||||||||
Sbjct: 494 ttgtggggtacagcacaattgtttatgcatcctcgttacatgcatggtggtgctactag 552
>gb|CX179193.1|CX179193 E08_45-78_10.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 654
Score = 153 bits (77), Expect = 3e-035
Identities = 257/317 (81%)
Strand = Plus / Plus
Query: 538 tgggagggggagttcttccccggcgtcccgaaaatcaagtatgagggtccaacaagcaag 597
||||| |||||||||||||| ||| | || ||||| ||||| ||||| || | ||||||
Sbjct: 155 tgggaaggggagttcttccctggcattcccaaaattaagtacgagggaccttctagcaag 214
Query: 598 aaccctcttgcttataagtggtataacaaggaggaagtgattctcggtaagaagatgaag 657
||||| || || | || |||||||| ||| |||| |||||| || ||||| ||||||
Sbjct: 215 aacccactagcattcaaatggtataatgcggaagaagagattcttgggaagaaaatgaag 274
Query: 658 gattggatgcgcttcagtgttgcgttctggcacacgttccgtggtactggcgctgatcct 717
||||||||| | |||||| |||| || |||||||| |||||||| || || | ||| ||
Sbjct: 275 gattggatgagattcagtattgcattttggcacacattccgtggaacaggaggtgacccc 334
Query: 718 ttcggtgctcctacaaagacttggccttgggaggacggcacaaattctttggccatggct 777
|| ||||| ||||| ||| |||||||||||| || || || ||||||||||| |||||
Sbjct: 335 tttggtgcgcctaccaagtattggccttgggaagatggaaccaattctttggctatggcc 394
Query: 778 aagagaagaatgagagctcactttgagttcatggagaagttgggagttgacaaatggtgc 837
|| || |||||||||||| | ||||||||| |||||||| | |||||||| | |||||
Sbjct: 395 aaaaggagaatgagagctaattttgagttcttggagaagattggagttgataggtggtgt 454
Query: 838 ttccatgacagggatat 854
|||||||| ||||||||
Sbjct: 455 ttccatgatagggatat 471
Score = 69.9 bits (35), Expect = 4e-010
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 952 ttgtggggtactgcacagctctttatgcatcctcgttacatgcatggcgctgctactag 1010
||||||||||| ||||| | |||||||||||||||||||||||||| | |||||||||
Sbjct: 566 ttgtggggtacagcacaattgtttatgcatcctcgttacatgcatggtggtgctactag 624
>gb|CX184662.1|CX184662 A11_45-118_01.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 656
Score = 153 bits (77), Expect = 3e-035
Identities = 257/317 (81%)
Strand = Plus / Plus
Query: 538 tgggagggggagttcttccccggcgtcccgaaaatcaagtatgagggtccaacaagcaag 597
||||| |||||||||||||| ||| | || ||||| ||||| ||||| || | ||||||
Sbjct: 182 tgggaaggggagttcttccctggcattcccaaaattaagtacgagggaccttctagcaag 241
Query: 598 aaccctcttgcttataagtggtataacaaggaggaagtgattctcggtaagaagatgaag 657
||||| || || | || |||||||| ||| |||| |||||| || ||||| ||||||
Sbjct: 242 aacccactagcattcaaatggtataatgcggaagaagagattcttgggaagaaaatgaag 301
Query: 658 gattggatgcgcttcagtgttgcgttctggcacacgttccgtggtactggcgctgatcct 717
||||||||| | |||||| |||| || |||||||| |||||||| || || | ||| ||
Sbjct: 302 gattggatgagattcagtattgcattttggcacacattccgtggaacaggaggtgacccc 361
Query: 718 ttcggtgctcctacaaagacttggccttgggaggacggcacaaattctttggccatggct 777
|| ||||| ||||| ||| |||||||||||| || || || ||||||||||| |||||
Sbjct: 362 tttggtgcgcctaccaagtattggccttgggaagatggaaccaattctttggctatggcc 421
Query: 778 aagagaagaatgagagctcactttgagttcatggagaagttgggagttgacaaatggtgc 837
|| || |||||||||||| | ||||||||| |||||||| | |||||||| | |||||
Sbjct: 422 aaaaggagaatgagagctaattttgagttcttggagaagattggagttgataggtggtgt 481
Query: 838 ttccatgacagggatat 854
|||||||| ||||||||
Sbjct: 482 ttccatgatagggatat 498
Score = 69.9 bits (35), Expect = 4e-010
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 952 ttgtggggtactgcacagctctttatgcatcctcgttacatgcatggcgctgctactag 1010
||||||||||| ||||| | |||||||||||||||||||||||||| | |||||||||
Sbjct: 593 ttgtggggtacagcacaattgtttatgcatcctcgttacatgcatggtggtgctactag 651
>gb|CX187327.1|CX187327 G03_45-27_13.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 676
Score = 153 bits (77), Expect = 3e-035
Identities = 257/317 (81%)
Strand = Plus / Plus
Query: 538 tgggagggggagttcttccccggcgtcccgaaaatcaagtatgagggtccaacaagcaag 597
||||| |||||||||||||| ||| | || ||||| ||||| ||||| || | ||||||
Sbjct: 202 tgggaaggggagttcttccctggcattcccaaaattaagtacgagggaccttctagcaag 261
Query: 598 aaccctcttgcttataagtggtataacaaggaggaagtgattctcggtaagaagatgaag 657
||||| || || | || |||||||| ||| |||| |||||| || ||||| ||||||
Sbjct: 262 aacccactagcattcaaatggtataatgcggaagaagagattcttgggaagaaaatgaag 321
Query: 658 gattggatgcgcttcagtgttgcgttctggcacacgttccgtggtactggcgctgatcct 717
||||||||| | |||||| |||| || |||||||| |||||||| || || | ||| ||
Sbjct: 322 gattggatgagattcagtattgcattttggcacacattccgtggaacaggaggtgacccc 381
Query: 718 ttcggtgctcctacaaagacttggccttgggaggacggcacaaattctttggccatggct 777
|| ||||| ||||| ||| |||||||||||| || || || ||||||||||| |||||
Sbjct: 382 tttggtgcgcctaccaagtattggccttgggaagatggaaccaattctttggctatggcc 441
Query: 778 aagagaagaatgagagctcactttgagttcatggagaagttgggagttgacaaatggtgc 837
|| || |||||||||||| | ||||||||| |||||||| | |||||||| | |||||
Sbjct: 442 aaaaggagaatgagagctaattttgagttcttggagaagattggagttgataggtggtgt 501
Query: 838 ttccatgacagggatat 854
|||||||| ||||||||
Sbjct: 502 ttccatgatagggatat 518
Score = 69.9 bits (35), Expect = 4e-010
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 952 ttgtggggtactgcacagctctttatgcatcctcgttacatgcatggcgctgctactag 1010
||||||||||| ||||| | |||||||||||||||||||||||||| | |||||||||
Sbjct: 613 ttgtggggtacagcacaattgtttatgcatcctcgttacatgcatggtggtgctactag 671
>gb|BU875211.1|BU875211 V003F03 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 675
Score = 145 bits (73), Expect = 8e-033
Identities = 256/317 (80%)
Strand = Plus / Plus
Query: 538 tgggagggggagttcttccccggcgtcccgaaaatcaagtatgagggtccaacaagcaag 597
||||| |||||||||||||| ||| | || ||||| ||||| ||||| || | ||||||
Sbjct: 169 tgggaaggggagttcttccctggcattcccaaaattaagtacgagggaccttctagcaag 228
Query: 598 aaccctcttgcttataagtggtataacaaggaggaagtgattctcggtaagaagatgaag 657
|| || || || | || |||||||| ||| |||| |||||| || ||||| ||||||
Sbjct: 229 aatccactagcattcaaatggtataatgcggaagaagagattcttgggaagaaaatgaag 288
Query: 658 gattggatgcgcttcagtgttgcgttctggcacacgttccgtggtactggcgctgatcct 717
||||||||| | |||||| |||| || |||||||| |||||||| || || | ||| ||
Sbjct: 289 gattggatgagattcagtattgcattttggcacacattccgtggaacaggaggtgacccc 348
Query: 718 ttcggtgctcctacaaagacttggccttgggaggacggcacaaattctttggccatggct 777
|| ||||| ||||| ||| |||||||||||| || || || ||||||||||| |||||
Sbjct: 349 tttggtgcgcctaccaagtattggccttgggaagatggaaccaattctttggctatggcc 408
Query: 778 aagagaagaatgagagctcactttgagttcatggagaagttgggagttgacaaatggtgc 837
|| || |||||||||||| | ||||||||| |||||||| | |||||||| | |||||
Sbjct: 409 aaaaggagaatgagagctaattttgagttcttggagaagattggagttgataggtggtgt 468
Query: 838 ttccatgacagggatat 854
|||||||| ||||||||
Sbjct: 469 ttccatgatagggatat 485
Score = 69.9 bits (35), Expect = 4e-010
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 952 ttgtggggtactgcacagctctttatgcatcctcgttacatgcatggcgctgctactag 1010
||||||||||| ||||| | |||||||||||||||||||||||||| | |||||||||
Sbjct: 580 ttgtggggtacagcacaattgtttatgcatcctcgttacatgcatggtggtgctactag 638
>gb|CX177485.1|CX177485 B03_45-58_03.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 559
Score = 145 bits (73), Expect = 8e-033
Identities = 256/317 (80%)
Strand = Plus / Plus
Query: 538 tgggagggggagttcttccccggcgtcccgaaaatcaagtatgagggtccaacaagcaag 597
||||| |||||||||||||| ||| | || ||||| ||||| ||||| || | ||||||
Sbjct: 117 tgggaaggggagttcttccctggcattcccaaaattaagtacgagggaccttctagcaag 176
Query: 598 aaccctcttgcttataagtggtataacaaggaggaagtgattctcggtaagaagatgaag 657
|| || || || | || |||||||| ||| |||| |||||| || ||||| ||||||
Sbjct: 177 aatccactagcattcaaatggtataatgcggaagaagagattcttgggaagaaaatgaag 236
Query: 658 gattggatgcgcttcagtgttgcgttctggcacacgttccgtggtactggcgctgatcct 717
||||||||| | |||||| |||| || |||||||| |||||||| || || | ||| ||
Sbjct: 237 gattggatgagattcagtattgcattttggcacacattccgtggaacaggaggtgacccc 296
Query: 718 ttcggtgctcctacaaagacttggccttgggaggacggcacaaattctttggccatggct 777
|| ||||| ||||| ||| |||||||||||| || || || ||||||||||| |||||
Sbjct: 297 tttggtgcgcctaccaagtattggccttgggaagatggaaccaattctttggctatggcc 356
Query: 778 aagagaagaatgagagctcactttgagttcatggagaagttgggagttgacaaatggtgc 837
|| || |||||||||||| | ||||||||| |||||||| | |||||||| | |||||
Sbjct: 357 aaaaggagaatgagagctaattttgagttcttggagaagattggagttgataggtggtgt 416
Query: 838 ttccatgacagggatat 854
|||||||| ||||||||
Sbjct: 417 ttccatgatagggatat 433
>gb|CX182624.1|CX182624 E05_45-33_09.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 579
Score = 145 bits (73), Expect = 8e-033
Identities = 256/317 (80%)
Strand = Plus / Plus
Query: 538 tgggagggggagttcttccccggcgtcccgaaaatcaagtatgagggtccaacaagcaag 597
||||| |||||||||||||| ||| | || ||||| ||||| ||||| || | ||||||
Sbjct: 180 tgggaaggggagttcttccctggcattcccaaaattaagtacgagggaccttctagcaag 239
Query: 598 aaccctcttgcttataagtggtataacaaggaggaagtgattctcggtaagaagatgaag 657
|| || || || | || |||||||| ||| |||| |||||| || ||||| ||||||
Sbjct: 240 aatccactagcattcaaatggtataatgcggaagaagagattcttgggaagaaaatgaag 299
Query: 658 gattggatgcgcttcagtgttgcgttctggcacacgttccgtggtactggcgctgatcct 717
||||||||| | |||||| |||| || |||||||| |||||||| || || | ||| ||
Sbjct: 300 gattggatgagattcagtattgcattttggcacacattccgtggaacaggaggtgacccc 359
Query: 718 ttcggtgctcctacaaagacttggccttgggaggacggcacaaattctttggccatggct 777
|| ||||| ||||| ||| |||||||||||| || || || ||||||||||| |||||
Sbjct: 360 tttggtgcgcctaccaagtattggccttgggaagatggaaccaattctttggctatggcc 419
Query: 778 aagagaagaatgagagctcactttgagttcatggagaagttgggagttgacaaatggtgc 837
|| || |||||||||||| | ||||||||| |||||||| | |||||||| | |||||
Sbjct: 420 aaaaggagaatgagagctaattttgagttcttggagaagattggagttgataggtggtgt 479
Query: 838 ttccatgacagggatat 854
|||||||| ||||||||
Sbjct: 480 ttccatgatagggatat 496
>gb|CX183629.1|CX183629 G12_45-115_14.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 715
Score = 145 bits (73), Expect = 8e-033
Identities = 256/317 (80%)
Strand = Plus / Plus
Query: 538 tgggagggggagttcttccccggcgtcccgaaaatcaagtatgagggtccaacaagcaag 597
||||| |||||||||||||| ||| | || ||||| ||||| ||||| || | ||||||
Sbjct: 216 tgggaaggggagttcttccctggcattcccaaaattaagtacgagggaccttctagcaag 275
Query: 598 aaccctcttgcttataagtggtataacaaggaggaagtgattctcggtaagaagatgaag 657
|| || || || | || |||||||| ||| |||| |||||| || ||||| ||||||
Sbjct: 276 aatccactagcattcaaatggtataatgcggaagaagagattcttgggaagaaaatgaag 335
Query: 658 gattggatgcgcttcagtgttgcgttctggcacacgttccgtggtactggcgctgatcct 717
||||||||| | |||||| |||| || |||||||| |||||||| || || | ||| ||
Sbjct: 336 gattggatgagattcagtattgcattttggcacacattccgtggaacaggaggtgacccc 395
Query: 718 ttcggtgctcctacaaagacttggccttgggaggacggcacaaattctttggccatggct 777
|| ||||| ||||| ||| |||||||||||| || || || ||||||||||| |||||
Sbjct: 396 tttggtgcgcctaccaagtattggccttgggaagatggaaccaattctttggctatggcc 455
Query: 778 aagagaagaatgagagctcactttgagttcatggagaagttgggagttgacaaatggtgc 837
|| || |||||||||||| | ||||||||| |||||||| | |||||||| | |||||
Sbjct: 456 aaaaggagaatgagagctaattttgagttcttggagaagattggagttgataggtggtgt 515
Query: 838 ttccatgacagggatat 854
|||||||| ||||||||
Sbjct: 516 ttccatgatagggatat 532
Score = 69.9 bits (35), Expect = 4e-010
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 952 ttgtggggtactgcacagctctttatgcatcctcgttacatgcatggcgctgctactag 1010
||||||||||| ||||| | |||||||||||||||||||||||||| | |||||||||
Sbjct: 627 ttgtggggtacagcacaattgtttatgcatcctcgttacatgcatggtggtgctactag 685
>gb|DN496876.1|DN496876 Q021E04.5pR Populus dormant bud cDNA library Populus tremula cDNA
clone Q021E04 5', mRNA sequence
Length = 747
Score = 137 bits (69), Expect = 2e-030
Identities = 255/317 (80%)
Strand = Plus / Plus
Query: 538 tgggagggggagttcttccccggcgtcccgaaaatcaagtatgagggtccaacaagcaag 597
||||| |||||||||||||| ||| | || ||||| |||| ||||| || | ||||||
Sbjct: 185 tgggaaggggagttcttccctggcattcccaaaattaagttcgagggaccttctagcaag 244
Query: 598 aaccctcttgcttataagtggtataacaaggaggaagtgattctcggtaagaagatgaag 657
|| || || || | || |||||||| ||| |||| |||||| || ||||| ||||||
Sbjct: 245 aatccactagcattcaaatggtataatgcggaagaagagattcttgggaagaaaatgaag 304
Query: 658 gattggatgcgcttcagtgttgcgttctggcacacgttccgtggtactggcgctgatcct 717
||||||||| | |||||| |||| || |||||||| |||||||| || || | ||| ||
Sbjct: 305 gattggatgagattcagtattgcattttggcacacattccgtggaacaggaggtgacccc 364
Query: 718 ttcggtgctcctacaaagacttggccttgggaggacggcacaaattctttggccatggct 777
|| ||||| ||||| ||| |||||||||||| || || || ||||||||||| |||||
Sbjct: 365 tttggtgcgcctaccaagtattggccttgggaagatggaaccaattctttggctatggcc 424
Query: 778 aagagaagaatgagagctcactttgagttcatggagaagttgggagttgacaaatggtgc 837
|| || |||||||||||| | ||||||||| |||||||| | |||||||| | |||||
Sbjct: 425 aaaaggagaatgagagctaattttgagttcttggagaagattggagttgataggtggtgt 484
Query: 838 ttccatgacagggatat 854
|||||||| ||||||||
Sbjct: 485 ttccatgatagggatat 501
Score = 69.9 bits (35), Expect = 4e-010
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 952 ttgtggggtactgcacagctctttatgcatcctcgttacatgcatggcgctgctactag 1010
||||||||||| ||||| | |||||||||||||||||||||||||| | |||||||||
Sbjct: 596 ttgtggggtacagcacaattgtttatgcatcctcgttacatgcatggtggtgctactag 654
>gb|BU863114.1|BU863114 S024B09 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 704
Score = 135 bits (68), Expect = 8e-030
Identities = 185/224 (82%)
Strand = Plus / Plus
Query: 631 gaagtgattctcggtaagaagatgaaggattggatgcgcttcagtgttgcgttctggcac 690
|||| |||||| || ||||| ||||||||||||||| | |||||| |||| || ||||||
Sbjct: 279 gaagagattcttgggaagaaaatgaaggattggatgagattcagtattgcattttggcac 338
Query: 691 acgttccgtggtactggcgctgatcctttcggtgctcctacaaagacttggccttgggag 750
|| |||||||| || || | ||| || || ||||| ||||| ||| ||||||||||||
Sbjct: 339 acattccgtggaacaggaggtgacccctttggtgcgcctaccaagtattggccttgggaa 398
Query: 751 gacggcacaaattctttggccatggctaagagaagaatgagagctcactttgagttcatg 810
|| || || ||||||||||| ||||| || || |||||||||||| | ||||||||| ||
Sbjct: 399 gatggaaccaattctttggctatggccaaaaggagaatgagagctaattttgagttcttg 458
Query: 811 gagaagttgggagttgacaaatggtgcttccatgacagggatat 854
|||||| | |||||||| | ||||| |||||||| ||||||||
Sbjct: 459 gagaagattggagttgataggtggtgtttccatgatagggatat 502
Score = 54.0 bits (27), Expect = 2e-005
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 952 ttgtggggtactgcacagctctttatgcatcctcgttacatgcatggcgctgctactag 1010
||||||||||| ||||| | |||||||||||||||| ||||||||| | |||||||||
Sbjct: 597 ttgtggggtacagcacaattgtttatgcatcctcgtt-catgcatggtggtgctactag 654
>gb|BU884976.1|BU884976 R018G11 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 304
Score = 135 bits (68), Expect = 8e-030
Identities = 185/224 (82%)
Strand = Plus / Plus
Query: 631 gaagtgattctcggtaagaagatgaaggattggatgcgcttcagtgttgcgttctggcac 690
|||| |||||| || ||||| ||||||||||||||| | |||||| |||| || ||||||
Sbjct: 29 gaagagattcttgggaagaaaatgaaggattggatgagattcagtattgcattttggcac 88
Query: 691 acgttccgtggtactggcgctgatcctttcggtgctcctacaaagacttggccttgggag 750
|| |||||||| || || | ||| || || ||||| ||||| ||| ||||||||||||
Sbjct: 89 acattccgtggaacaggaggtgacccctttggtgcgcctaccaagtattggccttgggaa 148
Query: 751 gacggcacaaattctttggccatggctaagagaagaatgagagctcactttgagttcatg 810
|| || || ||||||||||| ||||| || || |||||||||||| | ||||||||| ||
Sbjct: 149 gatggaaccaattctttggctatggccaaaaggagaatgagagctaattttgagttcttg 208
Query: 811 gagaagttgggagttgacaaatggtgcttccatgacagggatat 854
|||||| | |||||||| | ||||| |||||||| ||||||||
Sbjct: 209 gagaagattggagttgataggtggtgtttccatgatagggatat 252
>gb|BU898052.1|BU898052 X073H12 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 577
Score = 135 bits (68), Expect = 8e-030
Identities = 185/224 (82%)
Strand = Plus / Plus
Query: 631 gaagtgattctcggtaagaagatgaaggattggatgcgcttcagtgttgcgttctggcac 690
|||| |||||| || ||||| ||||||||||||||| | |||||| |||| || ||||||
Sbjct: 48 gaagagattcttgggaagaaaatgaaggattggatgagattcagtattgcattttggcac 107
Query: 691 acgttccgtggtactggcgctgatcctttcggtgctcctacaaagacttggccttgggag 750
|| |||||||| || || | ||| || || ||||| ||||| ||| ||||||||||||
Sbjct: 108 acattccgtggaacaggaggtgacccctttggtgcgcctaccaagtattggccttgggaa 167
Query: 751 gacggcacaaattctttggccatggctaagagaagaatgagagctcactttgagttcatg 810
|| || || ||||||||||| ||||| || || |||||||||||| | ||||||||| ||
Sbjct: 168 gatggaaccaattctttggctatggccaaaaggagaatgagagctaattttgagttcttg 227
Query: 811 gagaagttgggagttgacaaatggtgcttccatgacagggatat 854
|||||| | |||||||| | ||||| |||||||| ||||||||
Sbjct: 228 gagaagattggagttgataggtggtgtttccatgatagggatat 271
Score = 69.9 bits (35), Expect = 4e-010
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 952 ttgtggggtactgcacagctctttatgcatcctcgttacatgcatggcgctgctactag 1010
||||||||||| ||||| | |||||||||||||||||||||||||| | |||||||||
Sbjct: 366 ttgtggggtacagcacaattgtttatgcatcctcgttacatgcatggtggtgctactag 424
>gb|CA823921.1|CA823921 R33E05 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 485
Score = 123 bits (62), Expect = 3e-026
Identities = 233/290 (80%)
Strand = Plus / Plus
Query: 538 tgggagggggagttcttccccggcgtcccgaaaatcaagtatgagggtccaacaagcaag 597
||||| |||||||||||||| ||| | || ||||| ||||| ||||| || | ||||||
Sbjct: 181 tgggaaggggagttcttccctggcattcccaaaattaagtacgagggaccttctagcaag 240
Query: 598 aaccctcttgcttataagtggtataacaaggaggaagtgattctcggtaagaagatgaag 657
|| || || || | || |||||||| ||| |||| |||||| || ||||| ||||||
Sbjct: 241 aatccactagcattcaaatggtataatgcggaagaagagattcttgggaagaaaatgaag 300
Query: 658 gattggatgcgcttcagtgttgcgttctggcacacgttccgtggtactggcgctgatcct 717
||||||||| | |||||| |||| || |||||||| |||||||| || || | ||| ||
Sbjct: 301 gattggatgagattcagtattgcattttggcacacattccgtggaacaggaggtgacccc 360
Query: 718 ttcggtgctcctacaaagacttggccttgggaggacggcacaaattctttggccatggct 777
|| ||||| ||||| ||| |||||||||||| || || || ||||||| ||| |||||
Sbjct: 361 tttggtgcgcctaccaagtattggccttgggaagatggaaccaattcttcggctatggcc 420
Query: 778 aagagaagaatgagagctcactttgagttcatggagaagttgggagttga 827
|| || |||||||||||| | ||||||||| |||||||| | ||||||||
Sbjct: 421 aaaaggagaatgagagctaattttgagttcttggagaagattggagttga 470
>gb|CV236411.1|CV236411 WS01224.B21.1_A03 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01224_A03 3', mRNA sequence
Length = 908
Score = 123 bits (62), Expect = 3e-026
Identities = 298/374 (79%), Gaps = 2/374 (0%)
Strand = Plus / Minus
Query: 1342 gagtgcaaccatgctactctatctggacacagctgccatcatgaattggagactgcacgg 1401
|||||||||||||| ||||| || || |||||||| |||||||| | || |||||| |
Sbjct: 666 gagtgcaaccatgccactctttcaggtcacagctgtcatcatgagcttgaaactgcaaga 607
Query: 1402 attaatgggctgcttggaaatatcgatgcaaacactggtgatcctcaagttggttgggac 1461
|||||||| | || |||||||| ||||| |||||||| || | ||| |||| |||||
Sbjct: 606 attaatggtttactgggaaatattgatgcgaacactggagaccttcagattggatgggat 547
Query: 1462 acagatcagttcatgacagacattgcagaggctactttggttatgtcaagtgtagttaag 1521
||||||||||||||||| || ||| ||||||| ||| |||||||| ||||| | ||||
Sbjct: 546 acagatcagttcatgactgatatttcagaggcaactatggttatgattagtgt-gataag 488
Query: 1522 -aatggtggacttgcacctggtggtttcaactttgatgccaaattgcggagggaaagtac 1580
|| || ||| | ||||| || || ||||| |||||||| ||| |||| || || |||||
Sbjct: 487 aaacggaggattagcaccaggaggattcaattttgatgcaaaactgcgaagagagagtac 428
Query: 1581 tgatgttgaggacatgtttcttgcccatatctccggaatggacaccctggcacgtggcct 1640
|| ||||||||||| || ||||| ||||| |||||||| |||||||| ||||| ||
Sbjct: 427 agaagttgaggacatattccttgctcatattagtggaatggataccctggctcgtggact 368
Query: 1641 ccgtaacgttgccaagctgattgaggatggttccctagatgatcttgtccgcaagcggta 1700
||| | | ||||||| ||||| |||||||||| | | ||| ||||| ||||| || ||
Sbjct: 367 ccgaagtgctgccaagttgattcaggatggttcattggctgagcttgttcgcaaacgcta 308
Query: 1701 ccagagctttgata 1714
||||| |||||||
Sbjct: 307 tcagagttttgata 294
Score = 81.8 bits (41), Expect = 1e-013
Identities = 92/109 (84%)
Strand = Plus / Minus
Query: 1181 aagctgctgttgactacaagaagaagattggattcaacggaacactattgatagagccta 1240
|||||||||||| ||||||||||||||||||||||| ||||| || | || ||||| |
Sbjct: 827 aagctgctgttgcctacaagaagaagattggattcattggaactctgcttattgagccca 768
Query: 1241 aaccacaggaaccaacaaaacaccagtatgactgggatgttgcgactac 1289
| || || ||||| || ||||||||||| |||||||||| ||| |||||
Sbjct: 767 agcctcaagaacctaccaaacaccagtacgactgggatgctgctactac 719
>gb|CX177619.1|CX177619 G08_45-98_14.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 602
Score = 123 bits (62), Expect = 3e-026
Identities = 298/374 (79%), Gaps = 2/374 (0%)
Strand = Plus / Plus
Query: 1342 gagtgcaaccatgctactctatctggacacagctgccatcatgaattggagactgcacgg 1401
|||||||||||||| ||||| || || |||||||| |||||||| | || |||||| |
Sbjct: 6 gagtgcaaccatgccactctttcaggtcacagctgtcatcatgagcttgaaactgcaaga 65
Query: 1402 attaatgggctgcttggaaatatcgatgcaaacactggtgatcctcaagttggttgggac 1461
|||||||| | || |||||||| ||||| |||||||| || ||||| |||| |||||
Sbjct: 66 attaatggtttactgggaaatattgatgcgaacactggagaccctcagattggatgggat 125
Query: 1462 acagatcagttcatgacagacattgcagaggctactttggttatgtcaagtgtagttaag 1521
||||||||||||||||| || ||| ||||||| ||| |||||||| ||||| | ||||
Sbjct: 126 acagatcagttcatgactgatatttcagaggcaactatggttatgattagtgt-gataag 184
Query: 1522 -aatggtggacttgcacctggtggtttcaactttgatgccaaattgcggagggaaagtac 1580
|| || ||| | ||||| || || ||||| || ||||| ||| |||| || || |||||
Sbjct: 185 aaacggaggattagcaccaggaggattcaatttcgatgcaaaactgcgaagagagagtac 244
Query: 1581 tgatgttgaggacatgtttcttgcccatatctccggaatggacaccctggcacgtggcct 1640
|| ||||||||||| || ||||| ||||| |||||||| |||||||| ||||| ||
Sbjct: 245 agaagttgaggacatattccttgctcatattagtggaatggataccctggctcgtggact 304
Query: 1641 ccgtaacgttgccaagctgattgaggatggttccctagatgatcttgtccgcaagcggta 1700
||| | | ||||||| ||||| |||||||||| | | ||| ||||| ||||| || ||
Sbjct: 305 ccgaagtgctgccaagttgattcaggatggttcattggctgagcttgttcgcaaacgcta 364
Query: 1701 ccagagctttgata 1714
||||| |||||||
Sbjct: 365 tcagagttttgata 378
>gb|CX182511.1|CX182511 D12_45-33_08.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 579
Score = 123 bits (62), Expect = 3e-026
Identities = 298/374 (79%), Gaps = 2/374 (0%)
Strand = Plus / Plus
Query: 1342 gagtgcaaccatgctactctatctggacacagctgccatcatgaattggagactgcacgg 1401
|||||||||||||| ||||| || || |||||||| |||||||| | || |||||| |
Sbjct: 27 gagtgcaaccatgccactctttcaggtcacagctgtcatcatgagcttgaaactgcaaga 86
Query: 1402 attaatgggctgcttggaaatatcgatgcaaacactggtgatcctcaagttggttgggac 1461
|||||||| | || |||||||| ||||| |||||||| || ||||| |||| |||||
Sbjct: 87 attaatggtttactgggaaatattgatgcgaacactggagaccctcagattggatgggat 146
Query: 1462 acagatcagttcatgacagacattgcagaggctactttggttatgtcaagtgtagttaag 1521
||||||||||||||||| || ||| ||||||| ||| |||||||| ||||| | ||||
Sbjct: 147 acagatcagttcatgactgatatttcagaggcaactatggttatgattagtgt-gataag 205
Query: 1522 -aatggtggacttgcacctggtggtttcaactttgatgccaaattgcggagggaaagtac 1580
|| || ||| | ||||| || || ||||| || ||||| ||| |||| || || |||||
Sbjct: 206 aaacggaggattagcaccaggaggattcaatttcgatgcaaaactgcgaagagagagtac 265
Query: 1581 tgatgttgaggacatgtttcttgcccatatctccggaatggacaccctggcacgtggcct 1640
|| ||||||||||| || ||||| ||||| |||||||| |||||||| ||||| ||
Sbjct: 266 agaagttgaggacatattccttgctcatattagtggaatggataccctggctcgtggact 325
Query: 1641 ccgtaacgttgccaagctgattgaggatggttccctagatgatcttgtccgcaagcggta 1700
||| | | ||||||| ||||| |||||||||| | | ||| ||||| ||||| || ||
Sbjct: 326 ccgaagtgctgccaagttgattcaggatggttcattggctgagcttgttcgcaaacgcta 385
Query: 1701 ccagagctttgata 1714
||||| |||||||
Sbjct: 386 tcagagttttgata 399
>gb|CX184134.1|CX184134 E04_45-55_10.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 667
Score = 123 bits (62), Expect = 3e-026
Identities = 298/374 (79%), Gaps = 2/374 (0%)
Strand = Plus / Plus
Query: 1342 gagtgcaaccatgctactctatctggacacagctgccatcatgaattggagactgcacgg 1401
|||||||||||||| ||||| || || |||||||| |||||||| | || |||||| |
Sbjct: 44 gagtgcaaccatgccactctttcaggtcacagctgtcatcatgagcttgaaactgcaaga 103
Query: 1402 attaatgggctgcttggaaatatcgatgcaaacactggtgatcctcaagttggttgggac 1461
|||||||| | || |||||||| ||||| |||||||| || ||||| |||| |||||
Sbjct: 104 attaatggtttactgggaaatattgatgcgaacactggagaccctcagattggatgggat 163
Query: 1462 acagatcagttcatgacagacattgcagaggctactttggttatgtcaagtgtagttaag 1521
||||||||||||||||| || ||| ||||||| ||| |||||||| ||||| | ||||
Sbjct: 164 acagatcagttcatgactgatatttcagaggcaactatggttatgattagtgt-gataag 222
Query: 1522 -aatggtggacttgcacctggtggtttcaactttgatgccaaattgcggagggaaagtac 1580
|| || ||| | ||||| || || ||||| || ||||| ||| |||| || || |||||
Sbjct: 223 aaacggaggattagcaccaggaggattcaatttcgatgcaaaactgcgaagagagagtac 282
Query: 1581 tgatgttgaggacatgtttcttgcccatatctccggaatggacaccctggcacgtggcct 1640
|| ||||||||||| || ||||| ||||| |||||||| |||||||| ||||| ||
Sbjct: 283 agaagttgaggacatattccttgctcatattagtggaatggataccctggctcgtggact 342
Query: 1641 ccgtaacgttgccaagctgattgaggatggttccctagatgatcttgtccgcaagcggta 1700
||| | | ||||||| ||||| |||||||||| | | ||| ||||| ||||| || ||
Sbjct: 343 ccgaagtgctgccaagttgattcaggatggttcattggctgagcttgttcgcaaacgcta 402
Query: 1701 ccagagctttgata 1714
||||| |||||||
Sbjct: 403 tcagagttttgata 416
>gb|CX186999.1|CX186999 F04_45-25_12.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 650
Score = 123 bits (62), Expect = 3e-026
Identities = 298/374 (79%), Gaps = 2/374 (0%)
Strand = Plus / Plus
Query: 1342 gagtgcaaccatgctactctatctggacacagctgccatcatgaattggagactgcacgg 1401
|||||||||||||| ||||| || || |||||||| |||||||| | || |||||| |
Sbjct: 27 gagtgcaaccatgccactctttcaggtcacagctgtcatcatgagcttgaaactgcaaga 86
Query: 1402 attaatgggctgcttggaaatatcgatgcaaacactggtgatcctcaagttggttgggac 1461
|||||||| | || |||||||| ||||| |||||||| || ||||| |||| |||||
Sbjct: 87 attaatggtttactgggaaatattgatgcgaacactggagaccctcagattggatgggat 146
Query: 1462 acagatcagttcatgacagacattgcagaggctactttggttatgtcaagtgtagttaag 1521
||||||||||||||||| || ||| ||||||| ||| |||||||| ||||| | ||||
Sbjct: 147 acagatcagttcatgactgatatttcagaggcaactatggttatgattagtgt-gataag 205
Query: 1522 -aatggtggacttgcacctggtggtttcaactttgatgccaaattgcggagggaaagtac 1580
|| || ||| | ||||| || || ||||| || ||||| ||| |||| || || |||||
Sbjct: 206 aaacggaggattagcaccaggaggattcaatttcgatgcaaaactgcgaagagagagtac 265
Query: 1581 tgatgttgaggacatgtttcttgcccatatctccggaatggacaccctggcacgtggcct 1640
|| ||||||||||| || ||||| ||||| |||||||| |||||||| ||||| ||
Sbjct: 266 agaagttgaggacatattccttgctcatattagtggaatggataccctggctcgtggact 325
Query: 1641 ccgtaacgttgccaagctgattgaggatggttccctagatgatcttgtccgcaagcggta 1700
||| | | ||||||| ||||| |||||||||| | | ||| ||||| ||||| || ||
Sbjct: 326 ccgaagtgctgccaagttgattcaggatggttcattggctgagcttgttcgcaaacgcta 385
Query: 1701 ccagagctttgata 1714
||||| |||||||
Sbjct: 386 tcagagttttgata 399
>gb|CX180084.1|CX180084 D06_45-32_08.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 621
Score = 115 bits (58), Expect = 7e-024
Identities = 297/374 (79%), Gaps = 2/374 (0%)
Strand = Plus / Plus
Query: 1342 gagtgcaaccatgctactctatctggacacagctgccatcatgaattggagactgcacgg 1401
|||||||||||||| ||||| || || |||||||| |||||||| | || |||||| |
Sbjct: 243 gagtgcaaccatgccactctttcaggtcacagctgtcatcatgagcttgaaactgcaaga 302
Query: 1402 attaatgggctgcttggaaatatcgatgcaaacactggtgatcctcaagttggttgggac 1461
|||||||| | || |||||||| ||||| |||||||| || ||||| |||| |||||
Sbjct: 303 attaatggtttactgggaaatattgatgcgaacactggagaccctcagattggatgggat 362
Query: 1462 acagatcagttcatgacagacattgcagaggctactttggttatgtcaagtgtagttaag 1521
||||||||||||||||| || ||| ||||||| ||| |||||||| ||||| | ||||
Sbjct: 363 acagatcagttcatgactgatatttcagaggcaactatggttatgcttagtgt-gataag 421
Query: 1522 -aatggtggacttgcacctggtggtttcaactttgatgccaaattgcggagggaaagtac 1580
|| || ||| | ||||| || || ||||| || ||||| ||| |||| || || || ||
Sbjct: 422 aaacggaggattagcaccaggaggattcaatttcgatgcaaaactgcgaagagagagcac 481
Query: 1581 tgatgttgaggacatgtttcttgcccatatctccggaatggacaccctggcacgtggcct 1640
|| ||||||||||| || ||||| ||||| |||||||| |||||||| ||||| ||
Sbjct: 482 agaagttgaggacatattccttgctcatattagtggaatggataccctggctcgtggact 541
Query: 1641 ccgtaacgttgccaagctgattgaggatggttccctagatgatcttgtccgcaagcggta 1700
||| | | ||||||| ||||| |||||||||| | | ||| ||||| ||||| || ||
Sbjct: 542 ccgaagtgctgccaagttgattcaggatggttcattggctgagcttgttcgcaaacgcta 601
Query: 1701 ccagagctttgata 1714
||||| |||||||
Sbjct: 602 tcagagttttgata 615
Score = 89.7 bits (45), Expect = 4e-016
Identities = 93/109 (85%)
Strand = Plus / Plus
Query: 1181 aagctgctgttgactacaagaagaagattggattcaacggaacactattgatagagccta 1240
|||||||||||| ||||||||||||||||||||||| ||||| || | || ||||| |
Sbjct: 82 aagctgctgttgcctacaagaagaagattggattcagtggaactctgcttattgagccca 141
Query: 1241 aaccacaggaaccaacaaaacaccagtatgactgggatgttgcgactac 1289
| || || ||||| || |||||||||||||||||||||| ||| |||||
Sbjct: 142 agcctcaagaacctaccaaacaccagtatgactgggatgctgctactac 190
>gb|CB185045.1|CB185045 PopSC00181 Poplar SC cDNA library Populus alba x Populus tremula var.
glandulosa cDNA clone PopSC00181, mRNA sequence
Length = 376
Score = 111 bits (56), Expect = 1e-022
Identities = 257/324 (79%)
Strand = Plus / Plus
Query: 952 ttgtggggtactgcacagctctttatgcatcctcgttacatgcatggcgctgctactagc 1011
||||||||||| ||||| | |||||||||||||||||||||||||| | |||||||||
Sbjct: 53 ttgtggggtacagcacaattgtttatgcatcctcgttacatgcatggtggtgctactagt 112
Query: 1012 ccagaggttaaagtatatgcttatgcggctgcacaagttaagaaagctttggaggtcact 1071
| ||| | |||||||| ||||| || || ||||| |||||||| ||||||||||
Sbjct: 113 tctgagttaggcgtatatgcatatgctgcagctcaagtgaagaaagcaatggaggtcaca 172
Query: 1072 cactacctaggtggtgaaaactatgtgttctggggtggaagagagggttaccaaactctt 1131
|| || | ||||| ||||| ||||| || |||||||| | ||||| ||||| | ||||
Sbjct: 173 catgacttgggtggagaaaattatgtcttttggggtggtcgtgagggctaccagagtctt 232
Query: 1132 ctgaatactgatatgaagagagaacttgaccatctggctaactttcttcaagctgctgtt 1191
|||| || ||||| | || || ||||| ||| |||| | ||| |||||||||||
Sbjct: 233 ttgaacacacatatggaaagggagcttgatcatttggcaaggttttgcgaagctgctgtt 292
Query: 1192 gactacaagaagaagattggattcaacggaacactattgatagagcctaaaccacaggaa 1251
| |||||||||||||||||||||||| ||||| || | || ||||| || || || |||
Sbjct: 293 gcctacaagaagaagattggattcaatggaactctgcttattgagcccaagcctcaagaa 352
Query: 1252 ccaacaaaacaccagtatgactgg 1275
|| || ||||||||||| ||||||
Sbjct: 353 ccgaccaaacaccagtacgactgg 376
>gb|AJ770295.1|AJ770295 AJ770295 Populus euphratica leaf 3-6 months, adult Populus euphratica
cDNA clone P0001100010B06F1, mRNA sequence
Length = 307
Score = 109 bits (55), Expect = 5e-022
Identities = 202/251 (80%)
Strand = Plus / Plus
Query: 973 tttatgcatcctcgttacatgcatggcgctgctactagcccagaggttaaagtatatgct 1032
|||||||||||||||||||||||||| | ||||||||| | ||| | || |||||
Sbjct: 13 tttatgcatcctcgttacatgcatggtggtgctactagttctgagttaggcgtgtatgca 72
Query: 1033 tatgcggctgcacaagttaagaaagctttggaggtcactcactacctaggtggtgaaaac 1092
||||| || || ||||| |||||||| |||||||||| || || | ||||| |||||
Sbjct: 73 tatgctgcagctcaagtgaagaaagcaatggaggtcacacatcacttgggtggagaaaat 132
Query: 1093 tatgtgttctggggtggaagagagggttaccaaactcttctgaatactgatatgaagaga 1152
|| || || |||||||| ||||||||||||||| |||| | || || |||||| | |||
Sbjct: 133 tacgtcttttggggtggtcgagagggttaccaaagtcttttaaacacagatatggaaaga 192
Query: 1153 gaacttgaccatctggctaactttcttcaagctgctgttgactacaagaagaagattgga 1212
|| ||||| ||| |||| | ||| |||||||||||| |||||||||||||||||||
Sbjct: 193 gagcttgatcatttggcaaggttttgcgaagctgctgttgcctacaagaagaagattgga 252
Query: 1213 ttcaacggaac 1223
||||| |||||
Sbjct: 253 ttcaatggaac 263
>gb|AJ770702.1|AJ770702 AJ770702 Populus euphratica leaf 3-6 months, adult Populus euphratica
cDNA clone P0001100016A05F1, mRNA sequence
Length = 301
Score = 109 bits (55), Expect = 5e-022
Identities = 202/251 (80%)
Strand = Plus / Plus
Query: 973 tttatgcatcctcgttacatgcatggcgctgctactagcccagaggttaaagtatatgct 1032
|||||||||||||||||||||||||| | ||||||||| | ||| | || |||||
Sbjct: 13 tttatgcatcctcgttacatgcatggtggtgctactagttctgagttaggcgtgtatgca 72
Query: 1033 tatgcggctgcacaagttaagaaagctttggaggtcactcactacctaggtggtgaaaac 1092
||||| || || ||||| |||||||| |||||||||| || ||| | ||||| |||||
Sbjct: 73 tatgctgcagctcaagtgaagaaagcaatggaggtcacacattacttgggtggagaaaat 132
Query: 1093 tatgtgttctggggtggaagagagggttaccaaactcttctgaatactgatatgaagaga 1152
|| || || |||||||| ||||||||||||| | |||| | || || |||||| | |||
Sbjct: 133 tacgtcttttggggtggtcgagagggttaccagagtcttttaaacacagatatggaaaga 192
Query: 1153 gaacttgaccatctggctaactttcttcaagctgctgttgactacaagaagaagattgga 1212
|| ||||| ||| |||| | ||| |||||||||||| |||||||||||||||||||
Sbjct: 193 gagcttgatcatttggcaaggttttgcgaagctgctgttgcctacaagaagaagattgga 252
Query: 1213 ttcaacggaac 1223
||||| |||||
Sbjct: 253 ttcaatggaac 263
>gb|AJ769987.1|AJ769987 AJ769987 Populus euphratica leaf 3-6 months, adult Populus euphratica
cDNA clone P0001100005D07F1, mRNA sequence
Length = 311
Score = 105 bits (53), Expect = 7e-021
Identities = 137/165 (83%)
Strand = Plus / Plus
Query: 1342 gagtgcaaccatgctactctatctggacacagctgccatcatgaattggagactgcacgg 1401
|||||||||||||| ||||| || || |||||||| |||||||| | || |||||| |
Sbjct: 75 gagtgcaaccatgccactctttcaggtcacagctgtcatcatgagcttgaaactgcaaga 134
Query: 1402 attaatgggctgcttggaaatatcgatgcaaacactggtgatcctcaagttggttgggac 1461
|||||||| | || |||||||| ||||| |||||||| || ||||| |||| |||||
Sbjct: 135 attaatggtttactgggaaatattgatgcgaacactggagaccctcagattggatgggat 194
Query: 1462 acagatcagttcatgacagacattgcagaggctactttggttatg 1506
||||||||||||||||| || ||| ||||||| ||| ||||||||
Sbjct: 195 acagatcagttcatgactgatatttcagaggcaactatggttatg 239
>gb|AJ770296.1|AJ770296 AJ770296 Populus euphratica leaf 3-6 months, adult Populus euphratica
cDNA clone P0001100010B07F1, mRNA sequence
Length = 605
Score = 105 bits (53), Expect = 7e-021
Identities = 137/165 (83%)
Strand = Plus / Plus
Query: 1342 gagtgcaaccatgctactctatctggacacagctgccatcatgaattggagactgcacgg 1401
|||||||||||||| ||||| || || |||||||| |||||||| | || |||||| |
Sbjct: 378 gagtgcaaccatgccactctttcaggtcacagctgtcatcatgagcttgaaactgcaaga 437
Query: 1402 attaatgggctgcttggaaatatcgatgcaaacactggtgatcctcaagttggttgggac 1461
|||||||| | || |||||||| ||||| |||||||| || ||||| |||| |||||
Sbjct: 438 attaatggtttactgggaaatattgatgcgaacactggagaccctcagattggatgggat 497
Query: 1462 acagatcagttcatgacagacattgcagaggctactttggttatg 1506
||||||||||||||||| || ||| ||||||| ||| ||||||||
Sbjct: 498 acagatcagttcatgactgatatttcagaggcaactatggttatg 542
>gb|CX174648.1|CX174648 H07_69-1_15.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 594
Score = 105 bits (53), Expect = 7e-021
Identities = 261/329 (79%), Gaps = 1/329 (0%)
Strand = Plus / Plus
Query: 952 ttgtggggtactgcacagctctttatgcatcctcgttacatgcatggcgctgctactagc 1011
||||||||||| ||||| | |||||||||||||||||||||||||| | |||||||||
Sbjct: 211 ttgtggggtacagcacaattgtttatgcatcctcgttacatgcatggtggtgctactagt 270
Query: 1012 ccagaggttaaagtatatgcttatgcggctgcacaagttaagaaagctttggaggtcact 1071
| ||| | |||||||| ||||| || || ||||| |||||||| ||||||||||
Sbjct: 271 tctgagttaggcgtatatgcatatgctgcagctcaagtgaagaaagcaatggaggtcaca 330
Query: 1072 cactacctaggtggtgaaaactatgtgttctggggtggaagagagggttaccaaactctt 1131
|| || | ||||| ||||| ||||| || |||||||| | ||||||||||| | ||||
Sbjct: 331 catgacttgggtggagaaaattatgtcttttggggtggtcgtgagggttaccagagtctt 390
Query: 1132 ctgaatactgatatgaagagagaacttgaccatctggctaactttcttcaagctgctgtt 1191
|||| || |||||| | ||||| ||||| ||| |||| | | | | |||||||||
Sbjct: 391 ttgaacacagatatggaaagagagcttgatcatttggcaaggtcttgcgaggctgctgtt 450
Query: 1192 g-actacaagaagaagattggattcaacggaacactattgatagagcctaaaccacagga 1250
| ||||||||||||||||||||||| ||||| || | || ||||| || || || ||
Sbjct: 451 gctctacaagaagaagattggattcagtggaactctgcttattgagcccaagcctcaaga 510
Query: 1251 accaacaaaacaccagtatgactgggatg 1279
||| || |||||||| |||||||||||||
Sbjct: 511 acctaccaaacaccactatgactgggatg 539
Score = 87.7 bits (44), Expect = 2e-015
Identities = 98/116 (84%)
Strand = Plus / Plus
Query: 739 tggccttgggaggacggcacaaattctttggccatggctaagagaagaatgagagctcac 798
||||||||||| || || || ||||||||||| ||||| || || |||||||||||| |
Sbjct: 1 tggccttgggaagatggaaccaattctttggctatggccaaaaggagaatgagagctaat 60
Query: 799 tttgagttcatggagaagttgggagttgacaaatggtgcttccatgacagggatat 854
||||||||| |||||||| | |||||||| | ||||| |||||||| ||||||||
Sbjct: 61 tttgagttcttggagaagattggagttgataggtggtgtttccatgatagggatat 116
>gb|BU879499.1|BU879499 V061A02 Populus flower cDNA library Populus trichocarpa cDNA 5 prime,
mRNA sequence
Length = 420
Score = 99.6 bits (50), Expect = 4e-019
Identities = 208/258 (80%), Gaps = 2/258 (0%)
Strand = Plus / Plus
Query: 1417 ggaaatatcgatgcaaacactggtgatcctcaagttggttgggacacagatcagttcatg 1476
|||||||| ||||| |||||||| || ||||| |||| ||||| |||||||||||||||
Sbjct: 46 ggaaatattgatgcgaacactggagaccctcagattggatgggatacagatcagttcatg 105
Query: 1477 acagacattgcagaggctactttggttatgtcaagtgtagttaag-aatggtggacttgc 1535
|| || ||| ||||||| ||| |||||||| ||||| | |||| || || ||| | ||
Sbjct: 106 actgatatttcagaggcaactatggttatgattagtgt-gataagaaacggaggattagc 164
Query: 1536 acctggtggtttcaactttgatgccaaattgcggagggaaagtactgatgttgaggacat 1595
||| || || ||||| || ||||| ||| |||| ||||| ||||| || |||||||||||
Sbjct: 165 accaggaggattcaatttcgatgcaaaactgcgaagggagagtacagaagttgaggacat 224
Query: 1596 gtttcttgcccatatctccggaatggacaccctggcacgtggcctccgtaacgttgccaa 1655
|| ||||| ||||| |||||||| |||||||| ||||| ||||| | | ||||||
Sbjct: 225 attccttgctcatattagtggaatggataccctggctcgtggactccgaagtgctgccaa 284
Query: 1656 gctgattgaggatggttc 1673
| ||||| ||||||||||
Sbjct: 285 gttgattcaggatggttc 302
>gb|CV243730.1|CV243730 WS0252.B21_L03 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0252_L03
3', mRNA sequence
Length = 768
Score = 97.6 bits (49), Expect = 2e-018
Identities = 264/333 (79%), Gaps = 2/333 (0%)
Strand = Plus / Minus
Query: 1342 gagtgcaaccatgctactctatctggacacagctgccatcatgaattggagactgcacgg 1401
|||||||||||||| |||| || || |||||||| |||||||| | || |||||| |
Sbjct: 720 gagtgcaaccatgcccctctttcaggtcacagctgtcatcatgagcttgaaactgcaaga 661
Query: 1402 attaatgggctgcttggaaatatcgatgcaaacactggtgatcctcaagttggttgggac 1461
|||||||| | || |||||||| ||||| ||| |||| || ||||| |||| |||||
Sbjct: 660 attaatggtttactgggaaatattgatgcgaaccctggagaccctcagattggatgggat 601
Query: 1462 acagatcagttcatgacagacattgcagaggctactttggttatgtcaagtgtagttaag 1521
||||||||||||||||| || ||| ||||||| ||| |||||||| ||||| | ||||
Sbjct: 600 acagatcagttcatgactgatatttcagaggcaactatggttatgattagtgt-gataag 542
Query: 1522 -aatggtggacttgcacctggtggtttcaactttgatgccaaattgcggagggaaagtac 1580
|| || ||| | || || || || ||||| || ||||| ||| |||| ||||| |||||
Sbjct: 541 aaacggaggattagcccccggaggattcaatttcgatgcaaaactgcgaagggagagtac 482
Query: 1581 tgatgttgaggacatgtttcttgcccatatctccggaatggacaccctggcacgtggcct 1640
|| ||||||||||| || ||||| ||||| |||| ||| |||||||| ||||| ||
Sbjct: 481 agaagttgaggacatattccttgctcatattagtggaaaggataccctggctcgtggact 422
Query: 1641 ccgtaacgttgccaagctgattgaggatggttc 1673
||| | | ||||||| ||||| ||||||||||
Sbjct: 421 ccgaagtgctgccaagttgattcaggatggttc 389
>gb|AJ772019.1|AJ772019 AJ772019 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600013H04F1, mRNA sequence
Length = 307
Score = 93.7 bits (47), Expect = 3e-017
Identities = 200/251 (79%)
Strand = Plus / Plus
Query: 973 tttatgcatcctcgttacatgcatggcgctgctactagcccagaggttaaagtatatgct 1032
|||||||||||||| ||||||||||| | ||||||||| | ||| | || |||||
Sbjct: 13 tttatgcatcctcgctacatgcatggtggtgctactagttctgagttaggcgtgtatgca 72
Query: 1033 tatgcggctgcacaagttaagaaagctttggaggtcactcactacctaggtggtgaaaac 1092
||||| || || ||||| |||||||| |||||||||| || ||| | ||||| |||||
Sbjct: 73 tatgctgcagctcaagtgaagaaagcaatggaggtcacacattacttgggtggagaaaat 132
Query: 1093 tatgtgttctggggtggaagagagggttaccaaactcttctgaatactgatatgaagaga 1152
|| || || |||||||| ||||||||||||| | |||| | || || |||||| | |||
Sbjct: 133 tacgtcttttggggtggtcgagagggttaccagagtcttttaaacacagatatggaaaga 192
Query: 1153 gaacttgaccatctggctaactttcttcaagctgctgttgactacaagaagaagattgga 1212
|| ||||| ||| |||| | ||| |||||||||||| ||||||| |||||||||||
Sbjct: 193 gagcttgatcatttggcaaggttttgcgaagctgctgttgcctacaaggagaagattgga 252
Query: 1213 ttcaacggaac 1223
||||| |||||
Sbjct: 253 ttcaatggaac 263
>gb|BP933870.1|BP933870 BP933870 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-057_K15.r 3', mRNA sequence
Length = 608
Score = 79.8 bits (40), Expect = 4e-013
Identities = 225/284 (79%), Gaps = 2/284 (0%)
Strand = Plus / Minus
Query: 1432 aacactggtgatcctcaagttggttgggacacagatcagttcatgacagacattgcagag 1491
|||||||| || ||||| |||| ||||| ||||||||||||||||| || ||| |||||
Sbjct: 604 aacactggagaccctcagattggatgggatacagatcagttcatgactgatatttcagag 545
Query: 1492 gctactttggttatgtcaagtgtagttaag-aatggtggacttgcacctggtggtttcaa 1550
|| ||| |||||||| ||||| | |||| || || ||| | ||||| || || |||||
Sbjct: 544 gcaactatggttatgattagtgt-gataagaaacggaggattagcaccaggaggattcaa 486
Query: 1551 ctttgatgccaaattgcggagggaaagtactgatgttgaggacatgtttcttgcccatat 1610
|| ||||| ||| |||| || || ||||| || ||||||||||| || ||||| |||||
Sbjct: 485 tttcgatgcaaaactgcgaagagagagtacagaagttgaggacatattccttgctcatat 426
Query: 1611 ctccggaatggacaccctggcacgtggcctccgtaacgttgccaagctgattgaggatgg 1670
|||||||| |||||||| ||||| ||||| | | ||||||| ||||| |||||||
Sbjct: 425 tagtggaatggataccctggctcgtggactccgaagtgctgccaagttgattcaggatgg 366
Query: 1671 ttccctagatgatcttgtccgcaagcggtaccagagctttgata 1714
||| | | ||| ||||| ||||| || || ||||| |||||||
Sbjct: 365 ttcattggctgagcttgttcgcaaacgctatcagagttttgata 322
>gb|BU879968.1|BU879968 UM39TG07 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 518
Score = 73.8 bits (37), Expect = 3e-011
Identities = 210/265 (79%), Gaps = 2/265 (0%)
Strand = Plus / Plus
Query: 1451 ttggttgggacacagatcagttcatgacagacattgcagaggctactttggttatgtcaa 1510
|||| ||||| ||||||||||||||||| || ||| ||||||| ||| |||||||| |
Sbjct: 11 ttggatgggatacagatcagttcatgactgatatttcagaggcaactatggttatgatta 70
Query: 1511 gtgtagttaagaat-ggtggacttgcacctggtggtttcaactttgatgccaaattgcgg 1569
|||| | |||||| || ||| | ||||| || || ||||| || ||||| ||| ||||
Sbjct: 71 gtgt-gataagaaacggaggattagcaccaggaggattcaatttcgatgcaaaactgcga 129
Query: 1570 agggaaagtactgatgttgaggacatgtttcttgcccatatctccggaatggacaccctg 1629
|| || ||||| || ||||||||||| || ||||| ||||| |||||||| ||||||
Sbjct: 130 agagagagtacagaagttgaggacatattccttgctcatattagtggaatggataccctg 189
Query: 1630 gcacgtggcctccgtaacgttgccaagctgattgaggatggttccctagatgatcttgtc 1689
|| ||||| ||||| | | ||||||| ||||| |||||||||| | | ||| |||||
Sbjct: 190 gctcgtggactccgaagtgctgccaagttgattcaggatggttcattggctgagcttgtt 249
Query: 1690 cgcaagcggtaccagagctttgata 1714
||||| || || ||||| |||||||
Sbjct: 250 cgcaaacgttatcagagttttgata 274
>gb|BP930067.1|BP930067 BP930067 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-005_E05.r 3', mRNA sequence
Length = 580
Score = 73.8 bits (37), Expect = 3e-011
Identities = 210/265 (79%), Gaps = 2/265 (0%)
Strand = Plus / Minus
Query: 1451 ttggttgggacacagatcagttcatgacagacattgcagaggctactttggttatgtcaa 1510
|||| ||||| ||||||||||||||||| || ||| ||||||| ||| |||||||| |
Sbjct: 572 ttggatgggatacagatcagttcatgactgatatttcagaggcaactatggttatgatta 513
Query: 1511 gtgtagttaagaat-ggtggacttgcacctggtggtttcaactttgatgccaaattgcgg 1569
|||| | |||||| || ||| | ||||| || || ||||| || ||||| ||| ||||
Sbjct: 512 gtgt-gataagaaacggaggattagcaccaggaggattcaatttcgatgcaaaactgcga 454
Query: 1570 agggaaagtactgatgttgaggacatgtttcttgcccatatctccggaatggacaccctg 1629
|| || ||||| || ||||||||||| || ||||| ||||| |||||||| ||||||
Sbjct: 453 agagagagtacagaagttgaggacatattccttgctcatattagtggaatggataccctg 394
Query: 1630 gcacgtggcctccgtaacgttgccaagctgattgaggatggttccctagatgatcttgtc 1689
|| ||||| ||||| | | ||||||| ||||| |||||||||| | | ||| |||||
Sbjct: 393 gctcgtggactccgaagtgctgccaagttgattcaggatggttcattggctgagcttgtt 334
Query: 1690 cgcaagcggtaccagagctttgata 1714
||||| || || ||||| |||||||
Sbjct: 333 cgcaaacgctatcagagttttgata 309
>gb|BP926257.1|BP926257 BP926257 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-057_E05.f 5', mRNA sequence
Length = 384
Score = 71.9 bits (36), Expect = 1e-010
Identities = 132/164 (80%)
Strand = Plus / Plus
Query: 538 tgggagggggagttcttccccggcgtcccgaaaatcaagtatgagggtccaacaagcaag 597
||||| |||||||||||||| ||| | || ||||| ||||| ||||| || | ||||||
Sbjct: 197 tgggaaggggagttcttccctggcattcccaaaattaagtacgagggaccttctagcaag 256
Query: 598 aaccctcttgcttataagtggtataacaaggaggaagtgattctcggtaagaagatgaag 657
|| || || || | || |||||||| ||| |||| |||||| || ||||| ||||||
Sbjct: 257 aatccactagcattcaaatggtataatgcggaagaagagattcttgggaagaaaatgaag 316
Query: 658 gattggatgcgcttcagtgttgcgttctggcacacgttccgtgg 701
||||||||| | |||||| |||| || |||||||| ||||||||
Sbjct: 317 gattggatgagattcagtattgcattttggcacacattccgtgg 360
>gb|BP922234.1|BP922234 BP922234 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-005_E05.f 5', mRNA sequence
Length = 382
Score = 63.9 bits (32), Expect = 2e-008
Identities = 131/164 (79%)
Strand = Plus / Plus
Query: 538 tgggagggggagttcttccccggcgtcccgaaaatcaagtatgagggtccaacaagcaag 597
||||| |||||||||||||| ||| | || ||||| ||||| ||||| || | ||||||
Sbjct: 182 tgggaaggggagttcttccctggcattcccaaaattaagtacgagggaccttctagcaag 241
Query: 598 aaccctcttgcttataagtggtataacaaggaggaagtgattctcggtaagaagatgaag 657
|| || || || | || |||||||| ||| |||| |||||| || ||||| ||||||
Sbjct: 242 aatccactagcattcaaatggtataatgcggaagaagagattcttgggaagaaaatgaag 301
Query: 658 gattggatgcgcttcagtgttgcgttctggcacacgttccgtgg 701
|| |||||| | |||||| |||| || |||||||| ||||||||
Sbjct: 302 gagtggatgagattcagtattgcattttggcacacattccgtgg 345
>gb|CX657967.1|CX657967 PO01007E11 Poplar SC cDNA library Populus alba x Populus tremula var.
glandulosa cDNA clone PO01007E11 5', mRNA sequence
Length = 524
Score = 58.0 bits (29), Expect = 2e-006
Identities = 134/169 (79%)
Strand = Plus / Plus
Query: 1546 ttcaactttgatgccaaattgcggagggaaagtactgatgttgaggacatgtttcttgcc 1605
||||| || ||||| ||| |||| || || ||||| || ||||||||||| || |||||
Sbjct: 29 ttcaatttcgatgcaaaactgcgaagagagagtacagaagttgaggacatattccttgct 88
Query: 1606 catatctccggaatggacaccctggcacgtggcctccgtaacgttgccaagctgattgag 1665
||||| |||||||| |||||||| ||||| ||||| | | ||||||| ||||| ||
Sbjct: 89 catattagtggaatggataccctggctcgtggactccgaagtgctgccaagttgattcag 148
Query: 1666 gatggttccctagatgatcttgtccgcaagcggtaccagagctttgata 1714
|||||||| | | ||| ||||| ||||| || || ||||| |||||||
Sbjct: 149 gatggttcattggctgagcttgttcgcaaacgctatcagagttttgata 197
>gb|CX659502.1|CX659502 PO01031D10 Poplar SC cDNA library Populus alba x Populus tremula var.
glandulosa cDNA clone PO01031D10 5', mRNA sequence
Length = 524
Score = 58.0 bits (29), Expect = 2e-006
Identities = 134/169 (79%)
Strand = Plus / Plus
Query: 1546 ttcaactttgatgccaaattgcggagggaaagtactgatgttgaggacatgtttcttgcc 1605
||||| || ||||| ||| |||| || || ||||| || ||||||||||| || |||||
Sbjct: 29 ttcaatttcgatgcaaaactgcgaagagagagtacagaagttgaggacatattccttgct 88
Query: 1606 catatctccggaatggacaccctggcacgtggcctccgtaacgttgccaagctgattgag 1665
||||| |||||||| |||||||| ||||| ||||| | | ||||||| ||||| ||
Sbjct: 89 catattagtggaatggataccctggctcgtggactccgaagtgctgccaagttgattcag 148
Query: 1666 gatggttccctagatgatcttgtccgcaagcggtaccagagctttgata 1714
|||||||| | | ||| ||||| ||||| || || ||||| |||||||
Sbjct: 149 gatggttcattggctgagcttgttcgcaaacgctatcagagttttgata 197
>gb|BU868655.1|BU868655 M118E09 Populus flower cDNA library Populus trichocarpa cDNA 5 prime,
mRNA sequence
Length = 548
Score = 56.0 bits (28), Expect = 6e-006
Identities = 103/128 (80%)
Strand = Plus / Plus
Query: 1546 ttcaactttgatgccaaattgcggagggaaagtactgatgttgaggacatgtttcttgcc 1605
||||| || ||||| ||| |||| || || ||||| || ||||||||||| || |||||
Sbjct: 73 ttcaatttcgatgcaaaactgcgaagagagagtacagaagttgaggacatattccttgct 132
Query: 1606 catatctccggaatggacaccctggcacgtggcctccgtaacgttgccaagctgattgag 1665
||||| |||||||| |||||||| ||||| ||||| | | ||||||| ||||| ||
Sbjct: 133 catattagtggaatggataccctggctcgtggactccgaagtgctgccaagttgattcag 192
Query: 1666 gatggttc 1673
||||||||
Sbjct: 193 gatggttc 200
>gb|DN502148.1|DN502148 V055D12.5pR Populus male catkins cDNA library Populus trichocarpa
cDNA clone V055D12 5', mRNA sequence
Length = 631
Score = 54.0 bits (27), Expect = 2e-005
Identities = 105/131 (80%)
Strand = Plus / Plus
Query: 646 aagaagatgaaggattggatgcgcttcagtgttgcgttctggcacacgttccgtggtact 705
||||| ||||| ||||||||| |||| | |||| || |||||||| |||||||| ||
Sbjct: 242 aagaaaatgaacgattggatgatattcattattgcattttggcacacattccgtggaaca 301
Query: 706 ggcgctgatcctttcggtgctcctacaaagacttggccttgggaggacggcacaaattct 765
|| | ||| || || ||||| ||||| ||| |||||||||||| || || || ||||||
Sbjct: 302 ggaggtgacccctttggtgcgcctaccaagtattggccttgggaagatggaaccaattct 361
Query: 766 ttggccatggc 776
||||| |||||
Sbjct: 362 ttggctatggc 372
>gb|DT479262.1|DT479262 WS02525.BR_E03 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02525_E03 5', mRNA sequence
Length = 392
Score = 54.0 bits (27), Expect = 2e-005
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 1456 tgggacacagatcagttcatgacagacattgcagaggctactttggttatg 1506
||||| ||||||||||||||||| || ||| ||||||| ||| ||||||||
Sbjct: 228 tgggatacagatcagttcatgactgatatttcagaggcaactatggttatg 278
>gb|DT484382.1|DT484382 WS02525.B21_E03 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02525_E03 3', mRNA sequence
Length = 392
Score = 54.0 bits (27), Expect = 2e-005
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 1456 tgggacacagatcagttcatgacagacattgcagaggctactttggttatg 1506
||||| ||||||||||||||||| || ||| ||||||| ||| ||||||||
Sbjct: 165 tgggatacagatcagttcatgactgatatttcagaggcaactatggttatg 115
>gb|CX170506.1|CX170506 F04_69-78_12.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 650
Score = 52.0 bits (26), Expect = 9e-005
Identities = 104/130 (80%)
Strand = Plus / Plus
Query: 1585 gttgaggacatgtttcttgcccatatctccggaatggacaccctggcacgtggcctccgt 1644
||||||||||| || ||||| ||||| |||||||| |||||||| ||||| |||||
Sbjct: 219 gttgaggacatattccttgctcatattagtggaatggataccctggctcgtggactccga 278
Query: 1645 aacgttgccaagctgattgaggatggttccctagatgatcttgtccgcaagcggtaccag 1704
| | ||||||| ||||| |||||||||| | | ||| ||||| ||||| || || |||
Sbjct: 279 agtgctgccaagttgattcaggatggttcattggctgagcttgttcgcaaacgctatcag 338
Query: 1705 agctttgata 1714
|| |||||||
Sbjct: 339 agttttgata 348
>gb|BP928952.1|BP928952 BP928952 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-091_D23.f 5', mRNA sequence
Length = 372
Score = 50.1 bits (25), Expect = 4e-004
Identities = 103/129 (79%)
Strand = Plus / Plus
Query: 538 tgggagggggagttcttccccggcgtcccgaaaatcaagtatgagggtccaacaagcaag 597
||||| |||||||||||||| ||| | || ||||| ||||| ||||| || | ||||||
Sbjct: 189 tgggaaggggagttcttccctggcattcccaaaattaagtacgagggaccttctagcaag 248
Query: 598 aaccctcttgcttataagtggtataacaaggaggaagtgattctcggtaagaagatgaag 657
|| || || || | || |||||||| ||| |||| |||||| || ||||| ||||||
Sbjct: 249 aatccactagcattcaaatggtataatgcggaagaagagattcttgggaagaaaatgaag 308
Query: 658 gattggatg 666
|||||||||
Sbjct: 309 gattggatg 317
>gb|CB239728.1|CB239728 RSH15H04 two-month-old roots from clone 'Beaupre' grown for 19 days
under restricted irrigation Populus trichocarpa x Populus
deltoides cDNA 5', mRNA sequence
Length = 412
Score = 48.1 bits (24), Expect = 0.001
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1258 aaacaccagtatgactgggatgttgcgactac 1289
|||||||||||||||||||||| ||| |||||
Sbjct: 52 aaacaccagtatgactgggatgctgctactac 83
>gb|BP926297.1|BP926297 BP926297 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-057_K15.f 5', mRNA sequence
Length = 309
Score = 48.1 bits (24), Expect = 0.001
Identities = 102/128 (79%)
Strand = Plus / Plus
Query: 538 tgggagggggagttcttccccggcgtcccgaaaatcaagtatgagggtccaacaagcaag 597
||||| |||||||||||||| ||| | || ||||| ||||| ||||| || | ||||||
Sbjct: 182 tgggaaggggagttcttccctggcattcccaaaattaagtacgagggaccttctagcaag 241
Query: 598 aaccctcttgcttataagtggtataacaaggaggaagtgattctcggtaagaagatgaag 657
|| || || || | || |||||||| ||| |||| |||||| || ||||| ||||||
Sbjct: 242 aatccactagcattcaaatggtataatgcggaagaagagattcttgggaagaaaatgaag 301
Query: 658 gattggat 665
||||||||
Sbjct: 302 gattggat 309
>gb|CK089694.1|CK089694 C027P41.3pR Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA clone C027P41 3', mRNA sequence
Length = 508
Score = 44.1 bits (22), Expect = 0.023
Identities = 79/98 (80%)
Strand = Plus / Minus
Query: 1576 agtactgatgttgaggacatgtttcttgcccatatctccggaatggacaccctggcacgt 1635
||||| || ||||||||||| || ||||| ||||| |||||||| |||||||| |||
Sbjct: 468 agtacagaagttgaggacatattccttgctcatattagtggaatggataccctggctcgt 409
Query: 1636 ggcctccgtaacgttgccaagctgattgaggatggttc 1673
|| ||||| | | ||||||| ||||| || |||||||
Sbjct: 408 ggactccgaagtgctgccaagttgattcagaatggttc 371
>gb|BU885070.1|BU885070 R020C04 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 712
Score = 40.1 bits (20), Expect = 0.35
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1793 ccactgttgcatccggcaaa 1812
||||||||||||||||||||
Sbjct: 419 ccactgttgcatccggcaaa 400
>gb|DN487953.1|DN487953 R020C04.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R020C04 3', mRNA sequence
Length = 702
Score = 40.1 bits (20), Expect = 0.35
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1793 ccactgttgcatccggcaaa 1812
||||||||||||||||||||
Sbjct: 346 ccactgttgcatccggcaaa 365
>gb|DN497629.1|DN497629 R020C04.5pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R020C04 5', mRNA sequence
Length = 809
Score = 40.1 bits (20), Expect = 0.35
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1793 ccactgttgcatccggcaaa 1812
||||||||||||||||||||
Sbjct: 428 ccactgttgcatccggcaaa 409
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 251,530
Number of Sequences: 369679
Number of extensions: 251530
Number of successful extensions: 70691
Number of sequences better than 0.5: 48
Number of HSP's better than 0.5 without gapping: 41
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 70582
Number of HSP's gapped (non-prelim): 99
length of query: 2204
length of database: 203,408,664
effective HSP length: 20
effective length of query: 2184
effective length of database: 196,015,084
effective search space: 428096943456
effective search space used: 428096943456
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)