BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4548790.2.1
(1044 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF232314.1|CF232314 PtaJXO0008H8H0816 Poplar cDNA librar... 119 2e-025
gb|CV130860.1|CV130860 X9SP06f07 Populus stem seasonal libr... 113 1e-023
gb|BI127490.1|BI127490 G061P38Y Populus cambium cDNA librar... 107 9e-022
gb|CA826407.1|CA826407 R77F11 two-month-old roots from clon... 107 9e-022
gb|AY675563.1| Populus tomentosa expansin mRNA, complete cds 107 9e-022
gb|AI161578.1|AI161578 A002P74U Hybrid aspen plasmid librar... 105 3e-021
gb|CA933853.1|CA933853 MTU3TS.P13.E07 Aspen stem cDNA Libra... 105 3e-021
gb|CK103443.1|CK103443 G117P34.5pR Populus tension wood cDN... 105 3e-021
gb|CN523977.1|CN523977 GQ015M07.T3_G12 GQ015 Populus tricho... 105 3e-021
gb|CV272777.1|CV272777 WS0158.B21_K22 PTxN-IB-A-6 Populus t... 105 3e-021
gb|DT498988.1|DT498988 WS0116.BR_O20 PT-P-FL-A-2 Populus tr... 105 3e-021
gb|DT500134.1|DT500134 PX0011.BR_F03 PT-X-FL-A-1 Populus tr... 105 3e-021
gb|DT500322.1|DT500322 PX0015.BR_B14 PT-X-FL-A-1 Populus tr... 105 3e-021
gb|DT500905.1|DT500905 PX0019.BR_M05 PT-X-FL-A-1 Populus tr... 105 3e-021
gb|AY435099.1| Populus tremula x Populus tremuloides alpha-... 105 3e-021
gb|AI161713.1|AI161713 A005P65U Hybrid aspen plasmid librar... 101 5e-020
gb|BU836300.1|BU836300 T085A03 Populus apical shoot cDNA li... 101 5e-020
gb|CF235489.1|CF235489 PtaJXT0023D9D0907 Poplar cDNA librar... 101 5e-020
gb|CV249368.1|CV249368 WS01123.B21_O10 PT-P-FL-A-2 Populus ... 101 5e-020
gb|CV253162.1|CV253162 WS0221.B21_A23 PTxD-ICC-A-12 Populus... 101 5e-020
gb|CV257149.1|CV257149 WS0245.B21_N02 PTxD-ICC-N-A-14 Popul... 101 5e-020
gb|CV270120.1|CV270120 WS0151.B21_C09 PTxN-IB-A-6 Populus t... 101 5e-020
gb|CV271492.1|CV271492 WS0154.B21_N15 PTxN-IB-A-6 Populus t... 101 5e-020
gb|DT480494.1|DT480494 WS02529.BR_B06 PT-MB-N-A-15 Populus ... 101 5e-020
gb|DT485752.1|DT485752 WS02529.B21_B06 PT-MB-N-A-15 Populus... 101 5e-020
gb|DT496611.1|DT496611 WS01123.BR_O10 PT-P-FL-A-2 Populus t... 101 5e-020
gb|DT511098.1|DT511098 WS02429.BR_I21 PTxD-ICC-N-A-14 Popul... 101 5e-020
gb|AI166095.1|AI166095 B007p05u Hybrid aspen plasmid librar... 98 8e-019
gb|BI127499.1|BI127499 G061P54Y Populus cambium cDNA librar... 98 8e-019
gb|BI130398.1|BI130398 G105P12Y Populus cambium cDNA librar... 98 8e-019
gb|CF237189.1|CF237189 Ptajxtjxt3B1B0103 Poplar cDNA librar... 98 8e-019
gb|CN519711.1|CN519711 GQ0104.B3_L09 GQ010 Populus trichoca... 98 8e-019
gb|CN550374.1|CN550374 GQ0241.B3_P12 GQ024 Populus trichoca... 98 8e-019
gb|CN550508.1|CN550508 GQ0243.B3_K08 GQ024 Populus trichoca... 98 8e-019
gb|CV231063.1|CV231063 WS0193.B21_G24 PT-DX-N-A-10 Populus ... 98 8e-019
gb|CV270962.1|CV270962 WS0153.B21_G17 PTxN-IB-A-6 Populus t... 98 8e-019
gb|CV274658.1|CV274658 WS0173.B21_P17 PTxD-NR-A-8 Populus t... 98 8e-019
gb|CX169157.1|CX169157 B03_69-60_03.ab1 leaf inoculated wit... 98 8e-019
gb|CX169249.1|CX169249 D09_69-10_07.ab1 leaf inoculated wit... 98 8e-019
gb|CX173358.1|CX173358 F12_69-61_12.ab1 leaf inoculated wit... 98 8e-019
gb|CX174583.1|CX174583 B08_69-48_04.ab1 leaf inoculated wit... 98 8e-019
gb|CX176851.1|CX176851 G05_69-9_13.ab1 leaf inoculated with... 98 8e-019
gb|DT469643.1|DT469643 WS01918.C21_G22 PT-DX-N-A-10 Populus... 98 8e-019
gb|DT489698.1|DT489698 WS02542.B21_P01 PT-MB-N-A-15 Populus... 98 8e-019
gb|DT493606.1|DT493606 WS0111.BR_N24 PT-P-FL-A-2 Populus tr... 98 8e-019
gb|DT494368.1|DT494368 WS01118.BR.1_D11 PT-P-FL-A-2 Populus... 98 8e-019
gb|DT496327.1|DT496327 WS01123.BR_B11 PT-P-FL-A-2 Populus t... 98 8e-019
gb|DT497131.1|DT497131 WS01125.BR_J06 PT-P-FL-A-2 Populus t... 98 8e-019
gb|DT498875.1|DT498875 WS0116.BR_J18 PT-P-FL-A-2 Populus tr... 98 8e-019
gb|DT500187.1|DT500187 PX0011.BR_H19 PT-X-FL-A-1 Populus tr... 98 8e-019
gb|DT500250.1|DT500250 PX0011.BR_L17 PT-X-FL-A-1 Populus tr... 98 8e-019
gb|DT511189.1|DT511189 WS02429.BR_M18 PTxD-ICC-N-A-14 Popul... 98 8e-019
gb|DT515885.1|DT515885 WS02429.B21.1_M18 PTxD-ICC-N-A-14 Po... 98 8e-019
gb|DV463687.1|DV463687 MTUNUL1.P19.B11 NUL Populus fremonti... 98 8e-019
gb|DV465786.1|DV465786 MTUNUL1.P43.B06 NUL Populus fremonti... 98 8e-019
gb|DV466222.1|DV466222 MTUNUL1.P48.H04 NUL Populus fremonti... 98 8e-019
gb|BI131229.1|BI131229 G117P34Y Populus cambium cDNA librar... 94 1e-017
gb|CA930506.1|CA930506 MTU4CA.P23.D05 Aspen apex cDNA Libra... 94 1e-017
gb|CV268265.1|CV268265 WS0205.B21_A04 PTxN-IB-N-A-11 Populu... 94 1e-017
gb|DV466720.1|DV466720 MTUNUL1.P9.D04 NUL Populus fremontii... 92 5e-017
gb|CK319363.1|CK319363 X9P09h06 Populus stem seasonal libra... 90 2e-016
gb|CK089266.1|CK089266 B007P05.3pR Hybrid aspen plasmid lib... 86 3e-015
gb|CV257560.1|CV257560 WS0247.B21_A06 PTxD-ICC-N-A-14 Popul... 86 3e-015
gb|CX654203.1|CX654203 PO02014G01 Poplar SC cDNA library Po... 86 3e-015
gb|BI131887.1|BI131887 G127P12Y Populus cambium cDNA librar... 80 2e-013
gb|CX654586.1|CX654586 PO02016G07 Poplar SC cDNA library Po... 74 1e-011
gb|CN519121.1|CN519121 GQ0104.B3_B02 GQ010 Populus trichoca... 70 2e-010
gb|DT515798.1|DT515798 WS02429.B21.1_I21 PTxD-ICC-N-A-14 Po... 70 2e-010
gb|CV227288.1|CV227288 WS0166.B21_L24 PT-DX-A-7 Populus tri... 68 7e-010
gb|DT499097.1|DT499097 WS0117.BR_E15 PT-P-FL-A-2 Populus tr... 66 3e-009
gb|CK099681.1|CK099681 A080P42.5pR Hybrid aspen plasmid lib... 62 5e-008
gb|AI165287.1|AI165287 A080P42U Hybrid aspen plasmid librar... 56 3e-006
gb|CF236002.1|CF236002 PtaJXT0029E2E0210 Poplar cDNA librar... 56 3e-006
gb|CA923726.1|CA923726 MTU7CL.P14.B11 Aspen leaf cDNA Libra... 54 1e-005
gb|CF232705.1|CF232705 PtaJXO0014G6G0614 Poplar cDNA librar... 54 1e-005
gb|CV259380.1|CV259380 WS02011.B21_D08 PTxN-IB-N-A-11 Popul... 54 1e-005
gb|CV265899.1|CV265899 WS02028.B21_I23 PTxN-IB-N-A-11 Popul... 54 1e-005
gb|DT521517.1|DT521517 WS02034.B21_I03 PTxN-IB-N-A-11 Popul... 54 1e-005
gb|DT526688.1|DT526688 WS02048.C21_L07 PTxN-IB-N-A-11 Popul... 54 1e-005
gb|BU868621.1|BU868621 M118B09 Populus flower cDNA library ... 52 4e-005
gb|CK102036.1|CK102036 G061P38.5pR Populus tension wood cDN... 52 4e-005
gb|CN519990.1|CN519990 GQ0108.B3_K15 GQ010 Populus trichoca... 52 4e-005
gb|CV240405.1|CV240405 WS0251.B21_E17 PT-MB-N-A-15 Populus ... 52 4e-005
gb|DT490247.1|DT490247 WS02544.B21_H02 PT-MB-N-A-15 Populus... 52 4e-005
gb|DT492462.1|DT492462 WS02550.C21_M18 PT-MB-N-A-15 Populus... 52 4e-005
gb|DT507035.1|DT507035 WS02417.BR_C22 PTxD-ICC-N-A-14 Popul... 52 4e-005
gb|CB240458.1|CB240458 PopSC00443 Poplar SC cDNA library Po... 50 2e-004
gb|CX658121.1|CX658121 PO01009F10 Poplar SC cDNA library Po... 50 2e-004
gb|DT520342.1|DT520342 WS02447.B21_E17 PTxD-ICC-N-A-14 Popu... 50 2e-004
gb|DV463768.1|DV463768 MTUNUL1.P2.B10 NUL Populus fremontii... 50 2e-004
gb|AI161567.1|AI161567 A002P62U Hybrid aspen plasmid librar... 48 7e-004
gb|BU867573.1|BU867573 M101G12 Populus flower cDNA library ... 46 0.003
gb|CK109527.1|CK109527 N017H10 Populus bark cDNA library Po... 46 0.003
gb|CN520687.1|CN520687 GQ0106.B3_H16 GQ010 Populus trichoca... 46 0.003
gb|CN523732.1|CN523732 GQ015M10.T3_E03 GQ015 Populus tricho... 46 0.003
gb|CV226955.1|CV226955 WS0165.B21_M07 PT-DX-A-7 Populus tri... 46 0.003
gb|CV265146.1|CV265146 WS02026.B21_H07 PTxN-IB-N-A-11 Popul... 46 0.003
gb|CV272399.1|CV272399 WS0157.B21_I20 PTxN-IB-A-6 Populus t... 46 0.003
gb|CV277531.1|CV277531 WS0143.B21_N14 PTxD-IL-A-5 Populus t... 46 0.003
gb|CX180849.1|CX180849 D06_45-117_08.ab1 leaf inoculated wi... 46 0.003
gb|DT526315.1|DT526315 WS02047.C21_L05 PTxN-IB-N-A-11 Popul... 46 0.003
gb|DV464510.1|DV464510 MTUNUL1.P28.D10 NUL Populus fremonti... 46 0.003
gb|AI166743.1|AI166743 xylem.est.545 Poplar xylem Lambda ZA... 44 0.011
gb|BU867976.1|BU867976 M106F07 Populus flower cDNA library ... 44 0.011
gb|CA932631.1|CA932631 MTU5CS.P15.E02 Aspen stem cDNA Libra... 44 0.011
gb|CK318295.1|CK318295 B9P07f10 Populus stem seasonal libra... 44 0.011
gb|CV271182.1|CV271182 WS0154.B21_A05 PTxN-IB-A-6 Populus t... 44 0.011
gb|BU890451.1|BU890451 P037A11 Populus petioles cDNA librar... 42 0.042
gb|CA934286.1|CA934286 MTU3TS.P5.F08 Aspen stem cDNA Librar... 42 0.042
gb|CV247456.1|CV247456 WS01118.B21_D11 PT-P-FL-A-2 Populus ... 42 0.042
gb|CV249118.1|CV249118 WS01123.B21_B11 PT-P-FL-A-2 Populus ... 42 0.042
gb|CV252375.1|CV252375 PX0011.B21_H19 PT-X-FL-A-1 Populus t... 42 0.042
gb|DT497899.1|DT497899 WS0113.BR_M14 PT-P-FL-A-2 Populus tr... 42 0.042
gb|BI068323.1|BI068323 C020P28U Populus strain T89 leaves P... 40 0.17
gb|BI070667.1|BI070667 C041P74U Populus strain T89 leaves P... 40 0.17
gb|CA925535.1|CA925535 MTU7TL.P2.G08 Aspen leaf cDNA Librar... 40 0.17
gb|CA930772.1|CA930772 MTU2TA.P10.A06 Aspen apex cDNA Libra... 40 0.17
gb|CA931041.1|CA931041 MTU2TA.P1.C01 Aspen apex cDNA Librar... 40 0.17
gb|CA931089.1|CA931089 MTU2TA.P1.H04 Aspen apex cDNA Librar... 40 0.17
gb|CA931232.1|CA931232 MTU2TA.P4.D07 Aspen apex cDNA Librar... 40 0.17
gb|CA932095.1|CA932095 MTU4TA.P26.G11 Aspen apex cDNA Libra... 40 0.17
gb|CA933376.1|CA933376 MTU5CS.P7.B09 Aspen stem cDNA Librar... 40 0.17
gb|CA934619.1|CA934619 MTU5TS.P21.D05 Aspen stem cDNA Libra... 40 0.17
gb|CA934741.1|CA934741 MTU5TS.P23.B05 Aspen stem cDNA Libra... 40 0.17
gb|CF119349.1|CF119349 MTU10CS.P16.G01 Aspen stem cDNA Libr... 40 0.17
gb|CF119894.1|CF119894 MTU10CS.P7.F07 Aspen stem cDNA Libra... 40 0.17
gb|CF229000.1|CF229000 PtaXM0020A10A1002 Poplar cDNA librar... 40 0.17
gb|CK088219.1|CK088219 A044P14.3pR Hybrid aspen plasmid lib... 40 0.17
gb|CV230161.1|CV230161 WS01915.B21_J22 PT-DX-N-A-10 Populus... 40 0.17
gb|AF185574.2| Populus tremuloides transcription factor MAG... 40 0.17
gb|AY435100.1| Populus tremula x Populus tremuloides alpha-... 40 0.17
>gb|CF232314.1|CF232314 PtaJXO0008H8H0816 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 683
Score = 119 bits (60), Expect = 2e-025
Identities = 153/185 (82%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 465 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaanatc 524
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaagtcc 418
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 525 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaagang 584
Query: 419 ggcggggtgcggttcacaatcaacggcttccggtacttcaacctggtgctgatcacgaac 478
|| || | |||||||||| ||||| ||||| ||||||||| |||| ||||||| |||
Sbjct: 585 ggaggcataaggttcacaataaacggattccgntacttcaacttggtattgatcaccaac 644
Query: 479 gtggc 483
|||||
Sbjct: 645 gtggc 649
>gb|CV130860.1|CV130860 X9SP06f07 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 854
Score = 113 bits (57), Expect = 1e-023
Identities = 153/185 (82%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||||||||||||||||||||||||||| | |||
Sbjct: 220 ggctggtgcaaccctcctcgcccccacttcgacctcgccatgcccatgttccttaagatc 279
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaagtcc 418
|| ||||| | ||||| ||||| || || |||||||||||||||||||||| |||
Sbjct: 280 gcagagtatcatgccggtatcgtccctgttgcctaccgccgggtgccgtgccggaagaga 339
Query: 419 ggcggggtgcggttcacaatcaacggcttccggtacttcaacctggtgctgatcacgaac 478
|| || | |||||||||| ||||| ||||| ||||||||| |||| |||||| |||
Sbjct: 340 ggaggcataaggttcacaataaacgggttccgttacttcaacttggtattgatcagcaac 399
Query: 479 gtggc 483
|||||
Sbjct: 400 gtggc 404
Score = 44.1 bits (22), Expect = 0.011
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 551 aactggggccagaactggcagtccaacgcc 580
|||||||| |||||||||||||| ||||||
Sbjct: 472 aactggggtcagaactggcagtcaaacgcc 501
>gb|BI127490.1|BI127490 G061P38Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 502
Score = 107 bits (54), Expect = 9e-022
Identities = 96/110 (87%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
||||||||||| || |||||||| |||||||| || || ||||| ||||||||| | |||
Sbjct: 116 ggctggtgcaatcctccccgccctcacttcgatcttgctatgcctatgttcctcaagatc 175
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtg 408
||||||||||| || |||||||| || ||||| |||||||||||||||||
Sbjct: 176 gccgagtaccgtgctggcatcgtccctgtctcttaccgccgggtgccgtg 225
>gb|CA826407.1|CA826407 R77F11 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 645
Score = 107 bits (54), Expect = 9e-022
Identities = 98/113 (86%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||||||||||||||||||||||||||| | |||
Sbjct: 470 ggctggtgcaaccctcctcgcccccacttcgacctcgccatgcccatgttccttaagatc 529
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccg 411
|| ||||| | ||||| ||||| || || ||||||||||||||||||||||
Sbjct: 530 gcagagtatcatgccggtatcgtccctgtngcctaccgccgggtgccgtgccg 582
>gb|AY675563.1| Populus tomentosa expansin mRNA, complete cds
Length = 1009
Score = 107 bits (54), Expect = 9e-022
Identities = 96/110 (87%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
||||||||||| || || ||||| |||||||| || || ||||| ||||||||| | |||
Sbjct: 425 ggctggtgcaatcctcctcgccctcacttcgatcttgctatgcctatgttcctcaagatc 484
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtg 408
||||||||||| ||||||||||| || ||||| |||||||||||||||||
Sbjct: 485 gccgagtaccgtgccggcatcgtccctgtctcttaccgccgggtgccgtg 534
>gb|AI161578.1|AI161578 A002P74U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 577
Score = 105 bits (53), Expect = 3e-021
Identities = 153/185 (82%), Gaps = 1/185 (0%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 167 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaagatc 226
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaagtcc 418
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 227 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaagagg 286
Query: 419 ggcggggtgcggttcacaatcaacggcttccggtacttcaacctggtgctgatcacgaac 478
|| || | |||||||||| ||||| ||||| ||||||||| |||| ||||||| |||
Sbjct: 287 ggaggcataaggttcacaataaacggattccgttacttcaacttggtattgatcac-aac 345
Query: 479 gtggc 483
|||||
Sbjct: 346 gtggc 350
Score = 50.1 bits (25), Expect = 2e-004
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 551 aactggggccagaactggcagtccaacgc 579
||||||||||||||||||||||| |||||
Sbjct: 417 aactggggccagaactggcagtcaaacgc 445
>gb|CA933853.1|CA933853 MTU3TS.P13.E07 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 640
Score = 105 bits (53), Expect = 3e-021
Identities = 152/185 (82%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 190 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaagatc 249
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaagtcc 418
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 250 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaagagg 309
Query: 419 ggcggggtgcggttcacaatcaacggcttccggtacttcaacctggtgctgatcacgaac 478
|| || | |||||||||| ||||| ||||| ||||||||| |||| |||||| |||
Sbjct: 310 ggaggcataaggttcacaataaacggattccgttacttcaacttggtattgatcagcaac 369
Query: 479 gtggc 483
|||||
Sbjct: 370 gtggc 374
Score = 61.9 bits (31), Expect = 5e-008
Identities = 82/99 (82%)
Strand = Plus / Plus
Query: 551 aactggggccagaactggcagtccaacgccatcctcgtcggccaggcgctctccttccgc 610
||||||||||||||||||||||| ||||| |||| || |||||| | ||||||||| |
Sbjct: 442 aactggggccagaactggcagtcaaacgctgtcctggttggccagacactctccttcagg 501
Query: 611 gtcaccgccagcgaccgccgcacctccacctcctggaac 649
|||| ||||| ||| | ||| ||||||| || ||||||
Sbjct: 502 gtcagggccagtgacagacgctcctccacttcatggaac 540
>gb|CK103443.1|CK103443 G117P34.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G117P34 5', mRNA sequence
Length = 525
Score = 105 bits (53), Expect = 3e-021
Identities = 152/185 (82%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||||||||||||||||||||||||||| | |||
Sbjct: 263 ggctggtgcaaccctcctcgcccccacttcgacctcgccatgcccatgttccttaagatc 322
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaagtcc 418
|| ||||| | ||||| ||||| || || |||||||||||||||| ||||| |||
Sbjct: 323 gcagagtatcatgccggtatcgtccctgttgcctaccgccgggtgccatgccggaagaga 382
Query: 419 ggcggggtgcggttcacaatcaacggcttccggtacttcaacctggtgctgatcacgaac 478
|| || | |||||||||| ||||| ||||| ||||||||| |||| |||||| |||
Sbjct: 383 ggaggcataaggttcacaataaacgggttccgttacttcaacttggtattgatcagcaac 442
Query: 479 gtggc 483
|||||
Sbjct: 443 gtggc 447
>gb|CN523977.1|CN523977 GQ015M07.T3_G12 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M07_G12 5', mRNA sequence
Length = 749
Score = 105 bits (53), Expect = 3e-021
Identities = 152/185 (82%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||||||||||||||||||||||||||| | |||
Sbjct: 57 ggctggtgcaaccctcctcgcccccacttcgacctcgccatgcccatgttccttaagatc 116
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaagtcc 418
|| ||||| | ||||| ||||| || || |||||||||||||||| ||||| |||
Sbjct: 117 gcagagtatcatgccggtatcgtccctgttgcctaccgccgggtgccatgccggaagaga 176
Query: 419 ggcggggtgcggttcacaatcaacggcttccggtacttcaacctggtgctgatcacgaac 478
|| || | |||||||||| ||||| ||||| ||||||||| |||| |||||| |||
Sbjct: 177 ggaggcataaggttcacaataaacgggttccgttacttcaacttggtattgatcagcaac 236
Query: 479 gtggc 483
|||||
Sbjct: 237 gtggc 241
Score = 40.1 bits (20), Expect = 0.17
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 664 ctggcagttcggccagaccttcgagggcaagaacttcagggtct 707
||||||||| || ||||| ||| |||||||||||||||||||
Sbjct: 422 ctggcagtttggtcagactttcaccggcaagaacttcagggtct 465
>gb|CV272777.1|CV272777 WS0158.B21_K22 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0158_K22 3', mRNA sequence
Length = 974
Score = 105 bits (53), Expect = 3e-021
Identities = 152/185 (82%)
Strand = Plus / Minus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||||||||||||||||||||||||||| | |||
Sbjct: 864 ggctggtgcaaccctcctcgcccccacttcgacctcgccatgcccatgttccttaagatc 805
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaagtcc 418
|| ||||| | ||||| ||||| || || |||||||||||||||| ||||| |||
Sbjct: 804 gcagagtatcatgccggtatcgtccctgttgcctaccgccgggtgccatgccggaagaga 745
Query: 419 ggcggggtgcggttcacaatcaacggcttccggtacttcaacctggtgctgatcacgaac 478
|| || | |||||||||| ||||| ||||| ||||||||| |||| |||||| |||
Sbjct: 744 ggaggcattaggttcacaataaacgggttccgttacttcaacttggtattgatcagcaac 685
Query: 479 gtggc 483
|||||
Sbjct: 684 gtggc 680
>gb|DT498988.1|DT498988 WS0116.BR_O20 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0116_O20
5', mRNA sequence
Length = 602
Score = 105 bits (53), Expect = 3e-021
Identities = 152/185 (82%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||||||||||||||||||||||||||| | |||
Sbjct: 74 ggctggtgcaaccctcctcgcccccacttcgacctcgccatgcccatgttccttaagatc 133
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaagtcc 418
|| ||||| | ||||| ||||| || || |||||||||||||||| ||||| |||
Sbjct: 134 gcagagtatcatgccggtatcgtccctgttgcctaccgccgggtgccatgccggaagaga 193
Query: 419 ggcggggtgcggttcacaatcaacggcttccggtacttcaacctggtgctgatcacgaac 478
|| || | |||||||||| ||||| ||||| ||||||||| |||| |||||| |||
Sbjct: 194 ggaggcataaggttcacaataaacgggttccgttacttcaacttggtattgatcagcaac 253
Query: 479 gtggc 483
|||||
Sbjct: 254 gtggc 258
>gb|DT500134.1|DT500134 PX0011.BR_F03 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0011_F03
5', mRNA sequence
Length = 564
Score = 105 bits (53), Expect = 3e-021
Identities = 152/185 (82%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||||||||||||||||||||||||||| | |||
Sbjct: 186 ggctggtgcaaccctcctcgcccccacttcgacctcgccatgcccatgttccttaagatc 245
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaagtcc 418
|| ||||| | ||||| ||||| || || |||||||||||||||| ||||| |||
Sbjct: 246 gcagagtatcatgccggtatcgtccctgttgcctaccgccgggtgccatgccggaagaga 305
Query: 419 ggcggggtgcggttcacaatcaacggcttccggtacttcaacctggtgctgatcacgaac 478
|| || | |||||||||| ||||| ||||| ||||||||| |||| |||||| |||
Sbjct: 306 ggaggcataaggttcacaataaacgggttccgttacttcaacttggtattgatcagcaac 365
Query: 479 gtggc 483
|||||
Sbjct: 366 gtggc 370
>gb|DT500322.1|DT500322 PX0015.BR_B14 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0015_B14
5', mRNA sequence
Length = 686
Score = 105 bits (53), Expect = 3e-021
Identities = 152/185 (82%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||||||||||||||||||||||||||| | |||
Sbjct: 471 ggctggtgcaaccctcctcgcccccacttcgacctcgccatgcccatgttccttaagatc 530
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaagtcc 418
|| ||||| | ||||| ||||| || || |||||||||||||||| ||||| |||
Sbjct: 531 gcagagtatcatgccggtatcgtccctgttgcctaccgccgggtgccatgccggaagaga 590
Query: 419 ggcggggtgcggttcacaatcaacggcttccggtacttcaacctggtgctgatcacgaac 478
|| || | |||||||||| ||||| ||||| ||||||||| |||| |||||| |||
Sbjct: 591 ggaggcataaggttcacaataaacgggttccgttacttcaacttggtattgatcagcaac 650
Query: 479 gtggc 483
|||||
Sbjct: 651 gtggc 655
>gb|DT500905.1|DT500905 PX0019.BR_M05 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0019_M05
5', mRNA sequence
Length = 711
Score = 105 bits (53), Expect = 3e-021
Identities = 152/185 (82%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||||||||||||||||||||||||||| | |||
Sbjct: 186 ggctggtgcaaccctcctcgcccccacttcgacctcgccatgcccatgttccttaagatc 245
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaagtcc 418
|| ||||| | ||||| ||||| || || |||||||||||||||| ||||| |||
Sbjct: 246 gcagagtatcatgccggtatcgtccctgttgcctaccgccgggtgccatgccggaagaga 305
Query: 419 ggcggggtgcggttcacaatcaacggcttccggtacttcaacctggtgctgatcacgaac 478
|| || | |||||||||| ||||| ||||| ||||||||| |||| |||||| |||
Sbjct: 306 ggaggcataaggttcacaataaacgggttccgttacttcaacttggtattgatcagcaac 365
Query: 479 gtggc 483
|||||
Sbjct: 366 gtggc 370
>gb|AY435099.1| Populus tremula x Populus tremuloides alpha-expansin 1 (Exp1) mRNA,
complete cds
Length = 1210
Score = 105 bits (53), Expect = 3e-021
Identities = 152/185 (82%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 422 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaagatc 481
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaagtcc 418
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 482 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaagagg 541
Query: 419 ggcggggtgcggttcacaatcaacggcttccggtacttcaacctggtgctgatcacgaac 478
|| || | |||||||||| ||||| ||||| ||||||||| |||| |||||| |||
Sbjct: 542 ggaggcataaggttcacaataaacggattccgttacttcaacttggtattgatcagcaac 601
Query: 479 gtggc 483
|||||
Sbjct: 602 gtggc 606
Score = 54.0 bits (27), Expect = 1e-005
Identities = 81/99 (81%)
Strand = Plus / Plus
Query: 551 aactggggccagaactggcagtccaacgccatcctcgtcggccaggcgctctccttccgc 610
||||||||||||||||||||||| ||||| | || || |||||| | ||||||||| |
Sbjct: 674 aactggggccagaactggcagtcaaacgctgttctggttggccagacactctccttcagg 733
Query: 611 gtcaccgccagcgaccgccgcacctccacctcctggaac 649
|||| ||||| ||| | ||| ||||||| || ||||||
Sbjct: 734 gtcagggccagtgacagacgctcctccacttcttggaac 772
>gb|AI161713.1|AI161713 A005P65U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 422
Score = 101 bits (51), Expect = 5e-020
Identities = 138/167 (82%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 183 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaagatc 242
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaagtcc 418
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 243 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaagagg 302
Query: 419 ggcggggtgcggttcacaatcaacggcttccggtacttcaacctggt 465
|| || | |||||||||| ||||| ||||| ||||||||| ||||
Sbjct: 303 ggaggcataaggttcacaataaacggattccgttacttcaacttggt 349
>gb|BU836300.1|BU836300 T085A03 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 620
Score = 101 bits (51), Expect = 5e-020
Identities = 138/167 (82%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||||||||||||||||||||||||||| | |||
Sbjct: 421 ggctggtgcaaccctcctcgcccccacttcgacctcgccatgcccatgttccttaagatc 480
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaagtcc 418
|| ||||| | ||||| ||||| || || |||||||||||||||| ||||| |||
Sbjct: 481 gcagagtatcatgccggtatcgtccctgttgcctaccgccgggtgccatgccggaagaga 540
Query: 419 ggcggggtgcggttcacaatcaacggcttccggtacttcaacctggt 465
|| || | |||||||||| ||||| ||||| ||||||||| ||||
Sbjct: 541 ggaggcataaggttcacaataaacgggttccgttacttcaacttggt 587
>gb|CF235489.1|CF235489 PtaJXT0023D9D0907 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 678
Score = 101 bits (51), Expect = 5e-020
Identities = 138/167 (82%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 477 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaagatc 536
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaagtcc 418
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 537 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaagagg 596
Query: 419 ggcggggtgcggttcacaatcaacggcttccggtacttcaacctggt 465
|| || | |||||||||| ||||| ||||| ||||||||| ||||
Sbjct: 597 ggaggcataaggttcacaataaacggattccgttacttcaacttggt 643
>gb|CV249368.1|CV249368 WS01123.B21_O10 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01123_O10 3', mRNA sequence
Length = 782
Score = 101 bits (51), Expect = 5e-020
Identities = 93/107 (86%)
Strand = Plus / Minus
Query: 302 tggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgcc 361
|||||||| || |||||||| |||||||| || || ||||| ||||||||| | ||||||
Sbjct: 642 tggtgcaatcctccccgccctcacttcgatcttgctatgcctatgttcctcaagatcgcc 583
Query: 362 gagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtg 408
|||||||| || |||||||| || ||||| |||||||||||||||||
Sbjct: 582 gagtaccgtgctggcatcgtccctgtctcttaccgccgggtgccgtg 536
>gb|CV253162.1|CV253162 WS0221.B21_A23 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0221_A23 3', mRNA sequence
Length = 721
Score = 101 bits (51), Expect = 5e-020
Identities = 93/107 (86%)
Strand = Plus / Minus
Query: 302 tggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgcc 361
|||||||| || |||||||| |||||||| || || ||||| ||||||||| | ||||||
Sbjct: 674 tggtgcaatcctccccgccctcacttcgatcttgctatgcctatgttcctcaagatcgcc 615
Query: 362 gagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtg 408
|||||||| || |||||||| || ||||| |||||||||||||||||
Sbjct: 614 gagtaccgtgctggcatcgtccctgtctcttaccgccgggtgccgtg 568
>gb|CV257149.1|CV257149 WS0245.B21_N02 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0245_N02 3', mRNA sequence
Length = 769
Score = 101 bits (51), Expect = 5e-020
Identities = 93/107 (86%)
Strand = Plus / Plus
Query: 302 tggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgcc 361
|||||||| || |||||||| |||||||| || || ||||| ||||||||| | ||||||
Sbjct: 407 tggtgcaatcctccccgccctcacttcgatcttgctatgcctatgttcctcaagatcgcc 466
Query: 362 gagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtg 408
|||||||| || |||||||| || ||||| |||||||||||||||||
Sbjct: 467 gagtaccgtgctggcatcgtccctgtctcttaccgccgggtgccgtg 513
>gb|CV270120.1|CV270120 WS0151.B21_C09 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0151_C09 3', mRNA sequence
Length = 868
Score = 101 bits (51), Expect = 5e-020
Identities = 93/107 (86%)
Strand = Plus / Minus
Query: 302 tggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgcc 361
|||||||| || |||||||| |||||||| || || ||||| ||||||||| | ||||||
Sbjct: 677 tggtgcaatcctccccgccctcacttcgatcttgctatgcctatgttcctcaagatcgcc 618
Query: 362 gagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtg 408
|||||||| || |||||||| || ||||| |||||||||||||||||
Sbjct: 617 gagtaccgtgctggcatcgtccctgtctcttaccgccgggtgccgtg 571
>gb|CV271492.1|CV271492 WS0154.B21_N15 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0154_N15 3', mRNA sequence
Length = 871
Score = 101 bits (51), Expect = 5e-020
Identities = 93/107 (86%)
Strand = Plus / Minus
Query: 302 tggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgcc 361
|||||||| || |||||||| |||||||| || || ||||| ||||||||| | ||||||
Sbjct: 770 tggtgcaatcctccccgccctcacttcgatcttgctatgcctatgttcctcaagatcgcc 711
Query: 362 gagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtg 408
|||||||| || |||||||| || ||||| |||||||||||||||||
Sbjct: 710 gagtaccgtgctggcatcgtccctgtctcttaccgccgggtgccgtg 664
>gb|DT480494.1|DT480494 WS02529.BR_B06 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02529_B06 5', mRNA sequence
Length = 822
Score = 101 bits (51), Expect = 5e-020
Identities = 93/107 (86%)
Strand = Plus / Plus
Query: 302 tggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgcc 361
|||||||| || |||||||| |||||||| || || ||||| ||||||||| | ||||||
Sbjct: 231 tggtgcaatcctccccgccctcacttcgatcttgctatgcctatgttcctcaagatcgcc 290
Query: 362 gagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtg 408
|||||||| || |||||||| || ||||| |||||||||||||||||
Sbjct: 291 gagtaccgtgctggcatcgtccctgtctcttaccgccgggtgccgtg 337
>gb|DT485752.1|DT485752 WS02529.B21_B06 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02529_B06 3', mRNA sequence
Length = 907
Score = 101 bits (51), Expect = 5e-020
Identities = 93/107 (86%)
Strand = Plus / Minus
Query: 302 tggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgcc 361
|||||||| || |||||||| |||||||| || || ||||| ||||||||| | ||||||
Sbjct: 693 tggtgcaatcctccccgccctcacttcgatcttgctatgcctatgttcctcaagatcgcc 634
Query: 362 gagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtg 408
|||||||| || |||||||| || ||||| |||||||||||||||||
Sbjct: 633 gagtaccgtgctggcatcgtccctgtctcttaccgccgggtgccgtg 587
>gb|DT496611.1|DT496611 WS01123.BR_O10 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01123_O10 5', mRNA sequence
Length = 891
Score = 101 bits (51), Expect = 5e-020
Identities = 93/107 (86%)
Strand = Plus / Plus
Query: 302 tggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgcc 361
|||||||| || |||||||| |||||||| || || ||||| ||||||||| | ||||||
Sbjct: 439 tggtgcaatcctccccgccctcacttcgatcttgctatgcctatgttcctcaagatcgcc 498
Query: 362 gagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtg 408
|||||||| || |||||||| || ||||| |||||||||||||||||
Sbjct: 499 gagtaccgtgctggcatcgtccctgtctcttaccgccgggtgccgtg 545
>gb|DT511098.1|DT511098 WS02429.BR_I21 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_I21 5', mRNA sequence
Length = 805
Score = 101 bits (51), Expect = 5e-020
Identities = 93/107 (86%)
Strand = Plus / Plus
Query: 302 tggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatcgcc 361
|||||||| || |||||||| |||||||| || || ||||| ||||||||| | ||||||
Sbjct: 134 tggtgcaatcctccccgccctcacttcgatcttgctatgcctatgttcctcaagatcgcc 193
Query: 362 gagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtg 408
|||||||| || |||||||| || ||||| |||||||||||||||||
Sbjct: 194 gagtaccgtgctggcatcgtccctgtctcttaccgccgggtgccgtg 240
>gb|AI166095.1|AI166095 B007p05u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 283
Score = 97.6 bits (49), Expect = 8e-019
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 119 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaagatc 178
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaag 415
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 179 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaag 235
>gb|BI127499.1|BI127499 G061P54Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 532
Score = 97.6 bits (49), Expect = 8e-019
Identities = 97/113 (85%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||||||||||||||||||||||||||| | |||
Sbjct: 274 ggctggtgcaaccctcctcgcccccacttcgacctcgccatgcccatgttccttaagatc 333
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccg 411
|| ||||| | ||||| ||||| || || |||||||||||||||| |||||
Sbjct: 334 gcagagtatcatgccggtatcgtccctgttgcctaccgccgggtgccatgccg 386
>gb|BI130398.1|BI130398 G105P12Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 462
Score = 97.6 bits (49), Expect = 8e-019
Identities = 97/113 (85%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||||||||||||||||||||||||||| | |||
Sbjct: 325 ggctggtgcaaccctcctcgcccccacttcgacctcgccatgcccatgttccttaagatc 384
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccg 411
|| ||||| | ||||| ||||| || || |||||||||||||||| |||||
Sbjct: 385 gcagagtatcatgccggtatcgtccctgttgcctaccgccgggtgccatgccg 437
>gb|CF237189.1|CF237189 Ptajxtjxt3B1B0103 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 734
Score = 97.6 bits (49), Expect = 8e-019
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 463 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaagatc 522
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaag 415
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 523 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaag 579
>gb|CN519711.1|CN519711 GQ0104.B3_L09 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0104_L09 5', mRNA sequence
Length = 803
Score = 97.6 bits (49), Expect = 8e-019
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 449 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaagatc 508
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaag 415
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 509 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaag 565
>gb|CN550374.1|CN550374 GQ0241.B3_P12 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0241_P12 5', mRNA sequence
Length = 814
Score = 97.6 bits (49), Expect = 8e-019
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 426 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaagatc 485
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaag 415
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 486 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaag 542
>gb|CN550508.1|CN550508 GQ0243.B3_K08 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0243_K08 5', mRNA sequence
Length = 700
Score = 97.6 bits (49), Expect = 8e-019
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 451 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaagatc 510
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaag 415
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 511 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaag 567
>gb|CV231063.1|CV231063 WS0193.B21_G24 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0193_G24 3', mRNA sequence
Length = 471
Score = 97.6 bits (49), Expect = 8e-019
Identities = 100/117 (85%)
Strand = Plus / Minus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 451 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaagatc 392
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaag 415
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 391 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaag 335
Score = 46.1 bits (23), Expect = 0.003
Identities = 80/99 (80%)
Strand = Plus / Minus
Query: 551 aactggggccagaactggcagtccaacgccatcctcgtcggccaggcgctctccttccgc 610
||||||||||| ||||||||||| ||||| | || || |||||| | ||||||||| |
Sbjct: 199 aactggggccaaaactggcagtcaaacgctgttctggttggccagtcactctccttcagg 140
Query: 611 gtcaccgccagcgaccgccgcacctccacctcctggaac 649
|||| ||||| ||| | ||| ||||||| || ||||||
Sbjct: 139 gtcagggccagtgacagacgctcctccacttcatggaac 101
>gb|CV270962.1|CV270962 WS0153.B21_G17 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0153_G17 3', mRNA sequence
Length = 897
Score = 97.6 bits (49), Expect = 8e-019
Identities = 100/117 (85%)
Strand = Plus / Minus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 451 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaagatc 392
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaag 415
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 391 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaag 335
Score = 46.1 bits (23), Expect = 0.003
Identities = 80/99 (80%)
Strand = Plus / Minus
Query: 551 aactggggccagaactggcagtccaacgccatcctcgtcggccaggcgctctccttccgc 610
||||||||||| ||||||||||| ||||| | || || |||||| | ||||||||| |
Sbjct: 199 aactggggccaaaactggcagtcaaacgctgttctggttggccagtcactctccttcagg 140
Query: 611 gtcaccgccagcgaccgccgcacctccacctcctggaac 649
|||| ||||| ||| | ||| ||||||| || ||||||
Sbjct: 139 gtcagggccagtgacagacgctcctccacttcatggaac 101
>gb|CV274658.1|CV274658 WS0173.B21_P17 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0173_P17 3', mRNA sequence
Length = 887
Score = 97.6 bits (49), Expect = 8e-019
Identities = 100/117 (85%)
Strand = Plus / Minus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 779 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaagatc 720
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaag 415
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 719 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaag 663
Score = 46.1 bits (23), Expect = 0.003
Identities = 80/99 (80%)
Strand = Plus / Minus
Query: 551 aactggggccagaactggcagtccaacgccatcctcgtcggccaggcgctctccttccgc 610
||||||||||| ||||||||||| ||||| | || || |||||| | ||||||||| |
Sbjct: 527 aactggggccaaaactggcagtcaaacgctgttctggttggccagtcactctccttcagg 468
Query: 611 gtcaccgccagcgaccgccgcacctccacctcctggaac 649
|||| ||||| ||| | ||| ||||||| || ||||||
Sbjct: 467 gtcagggccagtgacagacgctcctccacttcatggaac 429
>gb|CX169157.1|CX169157 B03_69-60_03.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 621
Score = 97.6 bits (49), Expect = 8e-019
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 417 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaagatc 476
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaag 415
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 477 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaag 533
>gb|CX169249.1|CX169249 D09_69-10_07.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 656
Score = 97.6 bits (49), Expect = 8e-019
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 452 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaagatc 511
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaag 415
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 512 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaag 568
>gb|CX173358.1|CX173358 F12_69-61_12.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 674
Score = 97.6 bits (49), Expect = 8e-019
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 470 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaagatc 529
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaag 415
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 530 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaag 586
>gb|CX174583.1|CX174583 B08_69-48_04.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 695
Score = 97.6 bits (49), Expect = 8e-019
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 457 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaagatc 516
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaag 415
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 517 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaag 573
>gb|CX176851.1|CX176851 G05_69-9_13.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 656
Score = 97.6 bits (49), Expect = 8e-019
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 452 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaagatc 511
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaag 415
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 512 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaag 568
>gb|DT469643.1|DT469643 WS01918.C21_G22 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01918_G22 3', mRNA sequence
Length = 845
Score = 97.6 bits (49), Expect = 8e-019
Identities = 100/117 (85%)
Strand = Plus / Minus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 812 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaagatc 753
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaag 415
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 752 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaag 696
Score = 46.1 bits (23), Expect = 0.003
Identities = 80/99 (80%)
Strand = Plus / Minus
Query: 551 aactggggccagaactggcagtccaacgccatcctcgtcggccaggcgctctccttccgc 610
||||||||||| ||||||||||| ||||| | || || |||||| | ||||||||| |
Sbjct: 560 aactggggccaaaactggcagtcaaacgctgttctggttggccagtcactctccttcagg 501
Query: 611 gtcaccgccagcgaccgccgcacctccacctcctggaac 649
|||| ||||| ||| | ||| ||||||| || ||||||
Sbjct: 500 gtcagggccagtgacagacgctcctccacttcatggaac 462
>gb|DT489698.1|DT489698 WS02542.B21_P01 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02542_P01 3', mRNA sequence
Length = 918
Score = 97.6 bits (49), Expect = 8e-019
Identities = 100/117 (85%)
Strand = Plus / Minus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 817 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaagatc 758
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaag 415
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 757 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaag 701
Score = 46.1 bits (23), Expect = 0.003
Identities = 80/99 (80%)
Strand = Plus / Minus
Query: 551 aactggggccagaactggcagtccaacgccatcctcgtcggccaggcgctctccttccgc 610
||||||||||| ||||||||||| ||||| | || || |||||| | ||||||||| |
Sbjct: 565 aactggggccaaaactggcagtcaaacgctgttctggttggccagtcactctccttcagg 506
Query: 611 gtcaccgccagcgaccgccgcacctccacctcctggaac 649
|||| ||||| ||| | ||| ||||||| || ||||||
Sbjct: 505 gtcagggccagtgacagacgctcctccacttcatggaac 467
>gb|DT493606.1|DT493606 WS0111.BR_N24 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0111_N24
5', mRNA sequence
Length = 661
Score = 97.6 bits (49), Expect = 8e-019
Identities = 97/113 (85%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||||||||||||||||||||||||||| | |||
Sbjct: 472 ggctggtgcaaccctcctcgcccccacttcgacctcgccatgcccatgttccttaagatc 531
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccg 411
|| ||||| | ||||| ||||| || || |||||||||||||||| |||||
Sbjct: 532 gcagagtatcatgccggtatcgtccctgttgcctaccgccgggtgccatgccg 584
>gb|DT494368.1|DT494368 WS01118.BR.1_D11 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01118_D11 5', mRNA sequence
Length = 828
Score = 97.6 bits (49), Expect = 8e-019
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 462 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaagatc 521
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaag 415
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 522 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaag 578
Score = 42.1 bits (21), Expect = 0.042
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 551 aactggggccagaactggcagtccaacgc 579
||||||||||| ||||||||||| |||||
Sbjct: 714 aactggggccaaaactggcagtcaaacgc 742
>gb|DT496327.1|DT496327 WS01123.BR_B11 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01123_B11 5', mRNA sequence
Length = 885
Score = 97.6 bits (49), Expect = 8e-019
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 462 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaagatc 521
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaag 415
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 522 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaag 578
Score = 42.1 bits (21), Expect = 0.042
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 551 aactggggccagaactggcagtccaacgc 579
||||||||||| ||||||||||| |||||
Sbjct: 714 aactggggccaaaactggcagtcaaacgc 742
>gb|DT497131.1|DT497131 WS01125.BR_J06 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01125_J06 5', mRNA sequence
Length = 847
Score = 97.6 bits (49), Expect = 8e-019
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 465 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaagatc 524
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaag 415
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 525 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaag 581
Score = 42.1 bits (21), Expect = 0.042
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 551 aactggggccagaactggcagtccaacgc 579
||||||||||| ||||||||||| |||||
Sbjct: 717 aactggggccaaaactggcagtcaaacgc 745
>gb|DT498875.1|DT498875 WS0116.BR_J18 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0116_J18
5', mRNA sequence
Length = 655
Score = 97.6 bits (49), Expect = 8e-019
Identities = 97/113 (85%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||||||||||||||||||||||||||| | |||
Sbjct: 466 ggctggtgcaaccctcctcgcccccacttcgacctcgccatgcccatgttccttaagatc 525
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccg 411
|| ||||| | ||||| ||||| || || |||||||||||||||| |||||
Sbjct: 526 gcagagtatcatgccggtatcgtccctgttgcctaccgccgggtgccatgccg 578
>gb|DT500187.1|DT500187 PX0011.BR_H19 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0011_H19
5', mRNA sequence
Length = 647
Score = 97.6 bits (49), Expect = 8e-019
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 299 ggctggtgcaacccgccccgcccgcacttcgacctcgccatgcccatgttcctccacatc 358
|||||||||||||| || ||||| ||||| ||||| ||||||||||||||||| | |||
Sbjct: 462 ggctggtgcaaccctcctcgcccccactttgaccttgccatgcccatgttccttaagatc 521
Query: 359 gccgagtaccgcgccggcatcgtgcccgtctcctaccgccgggtgccgtgccgcaag 415
|||||||| || ||||| ||||| || || |||||||||| ||||| |||||||||
Sbjct: 522 gccgagtatcgtgccggtatcgtccctgttgcctaccgccgagtgccatgccgcaag 578
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 72,208
Number of Sequences: 369679
Number of extensions: 72208
Number of successful extensions: 21339
Number of sequences better than 0.5: 131
Number of HSP's better than 0.5 without gapping: 129
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 21117
Number of HSP's gapped (non-prelim): 221
length of query: 1044
length of database: 203,408,664
effective HSP length: 19
effective length of query: 1025
effective length of database: 196,384,763
effective search space: 201294382075
effective search space used: 201294382075
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)