BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3696743.2.1
(977 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV267224.1|CV267224 WS02031.B21_C18 PTxN-IB-N-A-11 Popul... 226 1e-057
gb|BU894173.1|BU894173 X003H07 Populus wood cDNA library Po... 222 2e-056
gb|BU812023.1|BU812023 UL91TD02 Populus leaf cDNA library P... 218 3e-055
gb|BI127370.1|BI127370 G059P39Y Populus cambium cDNA librar... 216 1e-054
gb|DV464201.1|DV464201 MTUNUL1.P24.D07 NUL Populus fremonti... 192 2e-047
gb|BU894661.1|BU894661 X012H09 Populus wood cDNA library Po... 184 4e-045
gb|DT516220.1|DT516220 WS02430.B21_L23 PTxD-ICC-N-A-14 Popu... 155 4e-036
gb|CV274847.1|CV274847 WS0174.B21.1_J06 PTxD-NR-A-8 Populus... 143 1e-032
gb|DV464515.1|DV464515 MTUNUL1.P28.E03 NUL Populus fremonti... 143 1e-032
gb|BU880106.1|BU880106 UM41TE06 Populus flower cDNA library... 141 6e-032
gb|CV231236.1|CV231236 WS0193.B21_O22 PT-DX-N-A-10 Populus ... 139 2e-031
gb|BU835074.1|BU835074 T069C02 Populus apical shoot cDNA li... 135 4e-030
gb|AJ772440.1|AJ772440 AJ772440 Populus euphratica shoot in... 135 4e-030
gb|BU896276.1|BU896276 X038C04 Populus wood cDNA library Po... 127 9e-028
gb|BU896297.1|BU896297 X038E11 Populus wood cDNA library Po... 127 9e-028
gb|CK097248.1|CK097248 UB44DPH02.3pR Populus active cambium... 127 9e-028
gb|AJ772710.1|AJ772710 AJ772710 Populus euphratica shoot in... 127 9e-028
gb|BU894478.1|BU894478 X010A02 Populus wood cDNA library Po... 121 5e-026
gb|CX171314.1|CX171314 G11_69-94_13.ab1 leaf inoculated wit... 121 5e-026
gb|BU891188.1|BU891188 P047A12 Populus petioles cDNA librar... 115 3e-024
gb|BU898140.1|BU898140 X075D09 Populus wood cDNA library Po... 113 1e-023
gb|CK099351.1|CK099351 A063P66.5pR Hybrid aspen plasmid lib... 111 5e-023
gb|CK117051.1|CK117051 B024P66 Hybrid aspen plasmid library... 111 5e-023
gb|CV269160.1|CV269160 WS0207.B21_H21 PTxN-IB-N-A-11 Populu... 111 5e-023
gb|CV227387.1|CV227387 WS0167.B21_A17 PT-DX-A-7 Populus tri... 105 3e-021
gb|AI166241.1|AI166241 a063p66u Hybrid aspen plasmid librar... 103 1e-020
gb|CV241850.1|CV241850 WS02513.B21_G18 PT-MB-N-A-15 Populus... 103 1e-020
gb|BU811238.1|BU811238 UL81TG02 Populus leaf cDNA library P... 90 2e-016
gb|BU895787.1|BU895787 X031A06 Populus wood cDNA library Po... 90 2e-016
gb|CV276089.1|CV276089 WS0178.B21.1_J13 PTxD-NR-A-8 Populus... 90 2e-016
gb|CK100043.1|CK100043 B006P29.5pR Hybrid aspen plasmid lib... 88 7e-016
gb|CK110333.1|CK110333 N055G06 Populus bark cDNA library Po... 88 7e-016
gb|DN488212.1|DN488212 R041G07.3pR Populus root cDNA librar... 88 7e-016
gb|CK096964.1|CK096964 UB34DPA12.3pR Populus active cambium... 82 5e-014
gb|CN519268.1|CN519268 GQ0103.B3_C13 GQ010 Populus trichoca... 82 5e-014
gb|CN524305.1|CN524305 GQ015M13.T3_E09 GQ015 Populus tricho... 80 2e-013
gb|DN500128.1|DN500128 UB48DPE03.5pR Populus active cambium... 78 7e-013
gb|BU819274.1|BU819274 UA41BPG08 Populus tremula cambium cD... 76 3e-012
gb|BU818866.1|BU818866 UA35CPF05 Populus tremula cambium cD... 70 2e-010
gb|AJ770191.1|AJ770191 AJ770191 Populus euphratica leaf 3-6... 70 2e-010
gb|BU821132.1|BU821132 UB19CPE07 Populus tremula cambium cD... 66 3e-009
gb|DN490157.1|DN490157 UB48DPE03.3pR Populus active cambium... 66 3e-009
gb|CV228921.1|CV228921 WS01911.B21_K08 PT-DX-N-A-10 Populus... 64 1e-008
gb|CV271647.1|CV271647 WS0155.B21_E13 PTxN-IB-A-6 Populus t... 64 1e-008
gb|CV274282.1|CV274282 WS0172.B21_M12 PTxD-NR-A-8 Populus t... 64 1e-008
gb|BU865267.1|BU865267 S051C12 Populus imbibed seed cDNA li... 58 7e-007
gb|BU865845.1|BU865845 S059E04 Populus imbibed seed cDNA li... 58 7e-007
gb|AJ773923.1|AJ773923 AJ773923 Populus euphratica shoot 3-... 58 7e-007
gb|CV270196.1|CV270196 WS0151.B21_F16 PTxN-IB-A-6 Populus t... 58 7e-007
gb|BU890263.1|BU890263 P034B07 Populus petioles cDNA librar... 56 3e-006
gb|BU886963.1|BU886963 R052G11 Populus root cDNA library Po... 50 2e-004
gb|BU827321.1|BU827321 UK131TC05 Populus apical shoot cDNA ... 44 0.010
gb|CK088784.1|CK088784 A072P19.3pR Hybrid aspen plasmid lib... 42 0.039
gb|CV269757.1|CV269757 WS0209.B21_C16 PTxN-IB-N-A-11 Populu... 42 0.039
gb|AJ777572.1|AJ777572 AJ777572 Populus euphratica root 3-6... 40 0.16
gb|DT480982.1|DT480982 WS02530.BR_I12 PT-MB-N-A-15 Populus ... 40 0.16
gb|DT486279.1|DT486279 WS02530.B21_I12 PT-MB-N-A-15 Populus... 40 0.16
>gb|CV267224.1|CV267224 WS02031.B21_C18 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02031_C18 3', mRNA sequence
Length = 960
Score = 226 bits (114), Expect = 1e-057
Identities = 381/470 (81%)
Strand = Plus / Plus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggagga 473
|||||||||||||| || |||||||| || || || |||||||||||||||||||| ||
Sbjct: 459 tctggctccatgtagaaacgagctcgaaatgcagcaagatgagcatagtatgcaggtggc 518
Query: 474 acgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagtt 533
|| || || || || || ||||| | ||||| ||||| || | ||||| || || |
Sbjct: 519 acaatggaaacagatcgcgtgcatcgtgcatatgtgtagcaaagattgtttgtcagggac 578
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||| ||||||||| ||||| |||||||||||||| || ||||| ||||| || ||||||
Sbjct: 579 tgcagcccatcagcagtaaacttgttctcatcccaaagtacatggtaatgagctggacgg 638
Query: 594 cttgttccctgaatgccagcatggctgcacaggtagaaatcaaactcggttggatggcaa 653
||||| |||||||| |||||||| || |||| ||||| ||||| || || ||||||||
Sbjct: 639 cttgtgccctgaatcccagcatgactacacaaatagaagtcaaattcagtaggatggcag 698
Query: 654 atctttgagtccaccacagtgcccggcagtatgttgccacttctatcggcagcacgctga 713
||||| |||||||| ||||| || |||| ||| || ||||| || || ||||| |
Sbjct: 699 atcttcgagtccacaacagtaccaggcaatatattcccactcctgtcaacagcattgcgg 758
Query: 714 tcattgtgattattaacaaacaacctggtgtgatgacgcttctggaccacgacaaaagta 773
||| ||||| ||| |||||| ||| ||||||||||||||||| ||||| ||||| ||
Sbjct: 759 tcacggtgatcatttgcaaacagccttgtgtgatgacgcttctgaaccacaacaaatgtc 818
Query: 774 actggaggctggtaatcagactccaatgatgcacaggcctttctaatggcatcaagttcg 833
|| ||||||||||||| | ||| || || ||||| ||||| | ||| ||||||||||||
Sbjct: 819 acaggaggctggtaattgggctctaaagaagcacatgccttacgaatagcatcaagttcg 878
Query: 834 tacaacagaacttggtagaactgtccctcactgacaccatccctgtagaa 883
||||||| |||||| || |||||||| |||||||||||||| ||||||||
Sbjct: 879 tacaacaaaacttgataaaactgtccttcactgacaccatctctgtagaa 928
Score = 58.0 bits (29), Expect = 7e-007
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 261 tagcagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctcacagca 320
|||||||||||||| || ||||| || || ||||| | ||||||||| ||||||||||||
Sbjct: 303 tagcagtagaacataacccgcttgacattctccttcaaggcaggtaaaggcctcacagca 362
Query: 321 acatt 325
||||
Sbjct: 363 gcatt 367
>gb|BU894173.1|BU894173 X003H07 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 618
Score = 222 bits (112), Expect = 2e-056
Identities = 443/552 (80%), Gaps = 1/552 (0%)
Strand = Plus / Minus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggagga 473
||||| |||||||| || |||||||| || || || |||||||||||||||||||| ||
Sbjct: 569 tctggttccatgtagaaacgagctcgaaatgcagcaagatgagcatagtatgcaggtggc 510
Query: 474 acgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagtt 533
|| || || || || || ||||| | ||||| ||||| |||| ||||| || || |
Sbjct: 509 acaatggaaacagaacgcgtgcatcgtgcatatgtgtagcacagattgtttgtcagggac 450
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||||||||||||| ||||| |||||||||||||| || ||||| || || || ||||||
Sbjct: 449 tgcaacccatcagcagtaaacttgttctcatcccaaagtacatggtagtgagctggacgg 390
Query: 594 cttgttccctgaatgccagcatggctgcacaggtagaaatcaaactcggttggatggcaa 653
||||| |||||||| || ||||| || |||| ||||| || || || || ||||||||
Sbjct: 389 cttgtgccctgaatcccggcatgactacacaaatagaagtcgaattcagtaggatggcag 330
Query: 654 atctttgagtccaccacagtgcccggcagtatgttgccacttctatcggcagcacgctga 713
||||| |||||||| ||||| || |||| ||| || ||||| || || |||||| |
Sbjct: 329 atcttcgagtccacaacagtaccaggcaatatattcccactcctgtcaacagcactgcgg 270
Query: 714 tcattgtgattattaacaaacaacctggtgtgatgacgcttctggaccacgacaaaagta 773
||| ||||| ||| |||||| ||| ||||||||||||||||| ||||| ||||| ||
Sbjct: 269 tcacggtgatcatttgcaaacagccttgtgtgatgacgcttctgaaccacaacaaatgtc 210
Query: 774 actggaggctggtaatcagactccaatgatgcacaggcctttctaatggcatcaagttcg 833
|| ||||||||||||| | ||| || || ||||| ||||| | ||| ||||| ||||||
Sbjct: 209 acaggaggctggtaattgggctctaaagaagcacatgccttacgaatagcatcgagttcg 150
Query: 834 tacaacagaacttggtagaactgtccctcactgacaccatccctgtagaatatgatcctc 893
||||||| |||||| || |||||||| |||||||||||||| ||||||||||| || | |
Sbjct: 149 tacaacaaaacttgataaaactgtccttcactgacaccatctctgtagaatattattcgc 90
Query: 894 ttgggtttttgtccagtcgccctccagaaagaaatgagaaggttccctaatcatgccacc 953
| || || ||||| || ||||| | ||| || ||||||| ||||| | |||||||||||
Sbjct: 89 tgtggcttctgtccggttgccctacggaaggatatgagaa-gttccttgatcatgccacc 31
Query: 954 agagacagtccc 965
||| || |||||
Sbjct: 30 agacactgtccc 19
>gb|BU812023.1|BU812023 UL91TD02 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 616
Score = 218 bits (110), Expect = 3e-055
Identities = 382/473 (80%)
Strand = Plus / Minus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggagga 473
||||| |||||||| | |||||||| || || || |||||||||||||||||||| ||
Sbjct: 525 tctggttccatgtaganacgagctcgaaatgcagcaagatgagcatagtatgcaggtggc 466
Query: 474 acgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagtt 533
|| || || || || || ||||| | ||||| ||||| |||| ||||| || || |
Sbjct: 465 acaatggaaacagaacgcgtgcatcgtgcatatgtgtagcacagattgtttgtcagggac 406
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||||||||||||| ||||| |||||||||||||| || ||||| ||||| || ||||||
Sbjct: 405 tgcaacccatcagcagtaaacttgttctcatcccaaagtacatggtaatgagccggacgg 346
Query: 594 cttgttccctgaatgccagcatggctgcacaggtagaaatcaaactcggttggatggcaa 653
||||| |||||||| || ||||| || |||| ||||| || || || || ||||||||
Sbjct: 345 cttgtgccctgaatcccggcatgactacacaaatagaagtcgaattcagtaggatggcag 286
Query: 654 atctttgagtccaccacagtgcccggcagtatgttgccacttctatcggcagcacgctga 713
||||| |||||||| ||||| || |||| ||| || ||||| || || |||||| |
Sbjct: 285 atcttcgagtccacaacagtaccaggcaatatattcccactcctgtcaacagcactgcgg 226
Query: 714 tcattgtgattattaacaaacaacctggtgtgatgacgcttctggaccacgacaaaagta 773
||| ||||| ||| |||||| ||| ||||||||||||||||| ||||| ||||| ||
Sbjct: 225 tcacggtgatcatttgcaaacagccttgtgtgatgacgcttctgaaccacaacaaatgtc 166
Query: 774 actggaggctggtaatcagactccaatgatgcacaggcctttctaatggcatcaagttcg 833
|| ||||||||||||| | ||| || || ||||| ||||| | ||| ||||| ||||||
Sbjct: 165 acaggaggctggtaattgggctctaaagaagcacatgccttacgaatagcatcgagttcg 106
Query: 834 tacaacagaacttggtagaactgtccctcactgacaccatccctgtagaatat 886
||||||| |||||| || |||||||| |||||||||||||| |||||||||||
Sbjct: 105 tacaacaaaacttgataaaactgtccttcactgacaccatctctgtagaatat 53
>gb|BI127370.1|BI127370 G059P39Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 502
Score = 216 bits (109), Expect = 1e-054
Identities = 382/473 (80%)
Strand = Plus / Minus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggagga 473
||||| |||||||| || |||||||| || || || |||||||||||||||||||| ||
Sbjct: 489 tctggttccatgtagaaacgagctcgaaatgcagcaagatgagcatagtatgcaggtggc 430
Query: 474 acgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagtt 533
|| || || || || || ||||| | ||||| ||||| |||| ||||| || || |
Sbjct: 429 acaatggaaacagaacgcgtgcatcgtgcatatgtgtagcacagattgtttgtcagggac 370
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||||||||||||| ||||| |||||||||||||| || ||||| || || || ||||||
Sbjct: 369 tgcaacccatcagcagtaaacttgttctcatcccaaagtacatggtagtgagctggacgg 310
Query: 594 cttgttccctgaatgccagcatggctgcacaggtagaaatcaaactcggttggatggcaa 653
||||| |||||||| || ||||| || |||| ||||| || || || || ||||||||
Sbjct: 309 cttgtgccctgaatcccggcatgactacacaaatagaagtcgaattcagtaggatggcag 250
Query: 654 atctttgagtccaccacagtgcccggcagtatgttgccacttctatcggcagcacgctga 713
||||| |||||||| ||||| || |||| ||| || ||||| || || |||||| |
Sbjct: 249 atcttcgagtccacaacagtaccaggcaatatattcccactcctgtcaacagcactgcgg 190
Query: 714 tcattgtgattattaacaaacaacctggtgtgatgacgcttctggaccacgacaaaagta 773
||| ||||| ||| |||||| ||| ||||||||||||||||| ||||| ||||| ||
Sbjct: 189 tcacggtgatcatttgcaaacagccttgtgtgatgacgcttctgaaccacaacaaatgtc 130
Query: 774 actggaggctggtaatcagactccaatgatgcacaggcctttctaatggcatcaagttcg 833
|| ||||||||||||| | ||| || || ||||| ||||| | ||| ||||| ||||||
Sbjct: 129 acaggaggctggtaattgggctctaaagaagcacatgccttacgaatagcatcgagttcg 70
Query: 834 tacaacagaacttggtagaactgtccctcactgacaccatccctgtagaatat 886
||||||| |||||| || |||||||| |||||||||||||| |||||||||||
Sbjct: 69 tacaacaaaacttgataaaactgtccttcactgacaccatctctgtagaatat 17
>gb|DV464201.1|DV464201 MTUNUL1.P24.D07 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 867
Score = 192 bits (97), Expect = 2e-047
Identities = 289/353 (81%)
Strand = Plus / Minus
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||| ||||||||| ||||| |||||||||||||| || ||||| ||||| || ||||||
Sbjct: 860 tgcagcccatcagcagtaaacttgttctcatcccaaagtacatggtaatgagctggacgg 801
Query: 594 cttgttccctgaatgccagcatggctgcacaggtagaaatcaaactcggttggatggcaa 653
||||| |||||||| ||||| || || |||| ||||| || || || || ||||||||
Sbjct: 800 cttgtgccctgaatcccagcgtgactacacaaatagaagtcgaattcagtaggatggcag 741
Query: 654 atctttgagtccaccacagtgcccggcagtatgttgccacttctatcggcagcacgctga 713
||||| |||||||| ||||| || |||| ||| || ||||| || || ||||| |
Sbjct: 740 atcttcgagtccacaacagtaccaggcaatatattcccactcctgtcaacagcattgcgg 681
Query: 714 tcattgtgattattaacaaacaacctggtgtgatgacgcttctggaccacgacaaaagta 773
||| ||||| ||| |||||| ||| ||||||||||||||||| ||||| ||||| ||
Sbjct: 680 tcacggtgatcatttgcaaacagcctagtgtgatgacgcttctgaaccacaacaaatgtc 621
Query: 774 actggaggctggtaatcagactccaatgatgcacaggcctttctaatggcatcaagttcg 833
|| ||||||||||||| | ||| || || ||||| ||||| | ||| ||||||||||||
Sbjct: 620 acaggaggctggtaattgggctctaaagaagcacatgccttacgaatagcatcaagttcg 561
Query: 834 tacaacagaacttggtagaactgtccctcactgacaccatccctgtagaatat 886
||||||| |||||| || |||||||| |||||||||||||| |||||||||||
Sbjct: 560 tacaacaaaacttgataaaactgtccttcactgacaccatctctgtagaatat 508
>gb|BU894661.1|BU894661 X012H09 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 814
Score = 184 bits (93), Expect = 4e-045
Identities = 350/433 (80%), Gaps = 2/433 (0%)
Strand = Plus / Minus
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||||||||||||| ||||| ||||||||||||| || ||||| ||||| || ||||||
Sbjct: 774 tgcaacccatcagcagtaaacatgttctcatcccaaagtacatggtaatgagccggacgg 715
Query: 594 cttgttccctgaatgccagcatggctgcacaggtagaaatcaaactcggttggatggcaa 653
||||| |||||||| || ||||| || |||| ||||| || || || || ||||||||
Sbjct: 714 cttgtgccctgaatcccggcatgactacacaaatagaagtcgaattcagtaggatggcag 655
Query: 654 atctttgagtccaccacagtgcccggcagtatgttgccacttctatcggcagcacgctga 713
||||| |||||||| ||||| || |||| ||| || ||||| || || |||||| |
Sbjct: 654 atcttcgagtccacaacagtaccaggcaatatattcccactcctgtcaacagcactgcgg 595
Query: 714 tcattgtgattattaacaaacaacc-tggtgtgatgacgcttctggaccacgacaaaagt 772
||| ||||| ||| |||||| || | ||||||||||||||||| ||||| ||||| ||
Sbjct: 594 tcacggtgatcatttgcaaacagcccttgtgtgatgacgcttctgaaccacaacaaatgt 535
Query: 773 aactggaggctggtaatcagactccaatgatgcacaggcctttctaatggcatcaagttc 832
|| ||||||||||||| | ||| || || ||||| ||||| | ||| ||||| |||||
Sbjct: 534 cacaggaggctggtaattgggctctaaagaagcacatgccttacgaatagcatcgagttc 475
Query: 833 gtacaacagaacttggtagaactgtccctcactgacaccatccctgtagaatatgatcct 892
|||||||| |||||| || |||||||| |||||||||||||| ||||||||||| || |
Sbjct: 474 gtacaacaaaacttgataaaactgtccttcactgacaccatctctgtagaatattattcg 415
Query: 893 cttgggtttttgtccagtcgccctccagaaagaaatgagaaggttccctaatcatgccac 952
|| || || ||||| || ||||| | ||| || ||||||| ||||| | ||||||||||
Sbjct: 414 ctgtggcttctgtccggttgccctacggaaggatatgagaa-gttccttgatcatgccac 356
Query: 953 cagagacagtccc 965
|||| || |||||
Sbjct: 355 cagacactgtccc 343
>gb|DT516220.1|DT516220 WS02430.B21_L23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02430_L23 3', mRNA sequence
Length = 910
Score = 155 bits (78), Expect = 4e-036
Identities = 345/434 (79%)
Strand = Plus / Plus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggagga 473
|||||||||||||| || |||||||| || || || |||||||||||||||||||| ||
Sbjct: 472 tctggctccatgtagaaacgagctcgaaatgcagcaagatgagcatagtatgcaggtggc 531
Query: 474 acgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagtt 533
|| || || || || | ||||| | ||||| ||||| || | ||||| || || |
Sbjct: 532 acaatggaaacagatctcgtgcatcgtgcatatgtgtagcaaagattgtttgtcagggac 591
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||| ||||||||| ||||| |||||||||||||| || ||||| ||||| || ||||||
Sbjct: 592 tgcagcccatcagcagtaaacttgttctcatcccaaagtacatggtaatgagctggacgg 651
Query: 594 cttgttccctgaatgccagcatggctgcacaggtagaaatcaaactcggttggatggcaa 653
||||| |||||||| ||||| || || |||| ||||| || || || || ||||||||
Sbjct: 652 cttgtgccctgaatcccagcgtgactacacaaatagaagtcgaattcagtaggatggcag 711
Query: 654 atctttgagtccaccacagtgcccggcagtatgttgccacttctatcggcagcacgctga 713
||||| |||||||| ||||| || |||| ||| || ||||| || || ||||| |
Sbjct: 712 atcttcgagtccacaacagtaccaggcaatatattcccactcctgtcaacagcattgcgg 771
Query: 714 tcattgtgattattaacaaacaacctggtgtgatgacgcttctggaccacgacaaaagta 773
||| ||||| ||| |||||| ||| ||||||||||||||||| ||||| ||||| ||
Sbjct: 772 tcacggtgatcatttgcaaacagccttgtgtgatgacgcttctgaaccacaacaaatgtc 831
Query: 774 actggaggctggtaatcagactccaatgatgcacaggcctttctaatggcatcaagttcg 833
|| ||||||||||||| | ||| || || ||||| ||||| | ||| |||||||| |||
Sbjct: 832 acaggaggctggtaattgggctctaaagaagcacatgccttacgaatagcatcaagctcg 891
Query: 834 tacaacagaacttg 847
||||||| ||||||
Sbjct: 892 tacaacaaaacttg 905
Score = 58.0 bits (29), Expect = 7e-007
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 261 tagcagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctcacagca 320
|||||||||||||| || ||||| || || ||||| | ||||||||| ||||||||||||
Sbjct: 316 tagcagtagaacataacccgcttgacattctccttcaaggcaggtaaaggcctcacagca 375
Query: 321 acatt 325
||||
Sbjct: 376 gcatt 380
>gb|CV274847.1|CV274847 WS0174.B21.1_J06 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0174_J06 3', mRNA sequence
Length = 849
Score = 143 bits (72), Expect = 1e-032
Identities = 300/376 (79%)
Strand = Plus / Plus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggagga 473
|||||||||||||| || |||||||| || || || |||||||||||||||||||| ||
Sbjct: 448 tctggctccatgtagaaacgagctcgaaatgcagcaagatgagcatagtatgcaggtggc 507
Query: 474 acgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagtt 533
|| || || || || || ||||| | ||||| ||||| || | ||||| || || |
Sbjct: 508 acaatggaaacagatcgcgtgcatcgtgcatatgtgtagcaaagattgtttgtcagggac 567
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||| ||||||||| ||||| |||||||||||||| || ||||| ||||| || ||||||
Sbjct: 568 tgcagcccatcagcagtaaacttgttctcatcccaaagtacatggtaatgagctggacgg 627
Query: 594 cttgttccctgaatgccagcatggctgcacaggtagaaatcaaactcggttggatggcaa 653
||||| |||||||| ||||| || || |||| ||||| || || || || ||||||||
Sbjct: 628 cttgtgccctgaatcccagcgtgactacacaaatagaagtcgaattcagtaggatggcag 687
Query: 654 atctttgagtccaccacagtgcccggcagtatgttgccacttctatcggcagcacgctga 713
||||| |||||||| ||||| || |||| ||| || ||||| || || ||||| |
Sbjct: 688 atcttcgagtccacaacagtaccaggcaatatattcccactcctgtcaacagcattacgg 747
Query: 714 tcattgtgattattaacaaacaacctggtgtgatgacgcttctggaccacgacaaaagta 773
||| ||||| ||| |||||| ||| ||||||||||||||||| ||||| ||||| ||
Sbjct: 748 tcacggtgatcatttgcaaacagccttgtgtgatgacgcttctgaaccacaacaaatgtc 807
Query: 774 actggaggctggtaat 789
|| |||||||||||||
Sbjct: 808 acaggaggctggtaat 823
Score = 58.0 bits (29), Expect = 7e-007
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 261 tagcagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctcacagca 320
|||||||||||||| || ||||| || || ||||| | ||||||||| ||||||||||||
Sbjct: 292 tagcagtagaacataacccgcttgacattctccttcaaggcaggtaaaggcctcacagca 351
Query: 321 acatt 325
||||
Sbjct: 352 gcatt 356
>gb|DV464515.1|DV464515 MTUNUL1.P28.E03 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 830
Score = 143 bits (72), Expect = 1e-032
Identities = 300/376 (79%)
Strand = Plus / Plus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggagga 473
|||||||||||||| || |||||||| || || || |||||||||||||||||||| ||
Sbjct: 443 tctggctccatgtagaaacgagctcgaaatgcagcaagatgagcatagtatgcaggtggc 502
Query: 474 acgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagtt 533
|| || || || || || ||||| | ||||| ||||| || | ||||| || || |
Sbjct: 503 acaatggaaacagatcgcgtgcatcgtgcatatgtgtagcaaagattgtttgtcagggac 562
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||| ||||||||| ||||| |||||||||||||| || ||||| ||||| || ||||||
Sbjct: 563 tgcagcccatcagcagtaaacttgttctcatcccaaagtacatggtaatgagctggacgg 622
Query: 594 cttgttccctgaatgccagcatggctgcacaggtagaaatcaaactcggttggatggcaa 653
||||| |||||||| ||||| || || |||| ||||| || || || || ||||||||
Sbjct: 623 cttgtgccctgaatcccagcgtgactacacaaatagaagtcgaattcagtaggatggcag 682
Query: 654 atctttgagtccaccacagtgcccggcagtatgttgccacttctatcggcagcacgctga 713
||||| |||||||| ||||| || |||| ||| || ||||| || || ||||| |
Sbjct: 683 atcttcgagtccacaacagtaccaggcaatatattcccactcctgtcaacagcattgcgg 742
Query: 714 tcattgtgattattaacaaacaacctggtgtgatgacgcttctggaccacgacaaaagta 773
||| ||||| ||| |||||| ||| ||||||||||||||||| ||||| ||||| ||
Sbjct: 743 tcacggtgatcatttgcaaacagcctagtgtgatgacgcttctgaaccacaacaaatgtc 802
Query: 774 actggaggctggtaat 789
|| |||||||||||||
Sbjct: 803 acaggaggctggtaat 818
Score = 58.0 bits (29), Expect = 7e-007
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 261 tagcagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctcacagca 320
|||||||||||||| || ||||| || || ||||| | ||||||||| ||||||||||||
Sbjct: 287 tagcagtagaacataacccgcttgacattctccttcaaggcaggtaaaggcctcacagca 346
Query: 321 acatt 325
||||
Sbjct: 347 gcatt 351
>gb|BU880106.1|BU880106 UM41TE06 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 610
Score = 141 bits (71), Expect = 6e-032
Identities = 189/227 (83%), Gaps = 1/227 (0%)
Strand = Plus / Minus
Query: 730 caaacaacctggtgtgatgacgcttctggaccacgacaaaagtaactggaggctggtaat 789
|||||| ||| ||||||||||||||||| ||||| ||||| || |||||||||||||| |
Sbjct: 314 caaacagccttgtgtgatgacgcttctgaaccacaacaaatgtcactggaggctggtagt 255
Query: 790 cagactccaatgatgcacaggcctttctaatggcatcaagttcgtacaacagaacttggt 849
| ||| || || ||||| ||||| | ||| ||||||||||||| ||||| |||||| |
Sbjct: 254 tgggctctaaagaagcacatgccttacgaatagcatcaagttcgtgcaacaaaacttgat 195
Query: 850 agaactgtccctcactgacaccatccctgtagaatatgatcctcttgggtttttgtccag 909
||||||| || |||||||||||||| ||||||||||| || |||| || || || || |
Sbjct: 194 agaactgcccttcactgacaccatctctgtagaatataattctctgaggcttctgccctg 135
Query: 910 tcgccctccagaaagaaatgagaaggttccctaatcatgccaccaga 956
| || |||| |||||| ||||||| ||||| | ||||||||||||||
Sbjct: 134 tggctctccggaaagatatgagaa-gttccttgatcatgccaccaga 89
Score = 131 bits (66), Expect = 6e-029
Identities = 198/242 (81%)
Strand = Plus / Minus
Query: 432 cgagctcggaaggctgccagatgagcatagtatgcaggaggaacgattgatactgagcgt 491
||||||||| | || || ||||| |||||||||||||| || || || ||||| || ||
Sbjct: 610 cgagctcgggatgcagcaagatgtgcatagtatgcaggtggcacaatggatacagaacgc 551
Query: 492 gtgcacctggcatacgtgtaacacaagttgttggtgagagtttgcaacccatcagccgta 551
||||| || ||||| ||||| || | ||||| || |||| |||||||||||||| ||
Sbjct: 550 gtgcatcttgcatatgtgtagcaaagattgtttgtaagagactgcaacccatcagcagtg 491
Query: 552 aatttgttctcatcccacagaacatgataatgggcaggacggcttgttccctgaatgcca 611
|| |||||||||||||| || ||||| ||||| || ||||||||||| |||||||| |||
Sbjct: 490 aacttgttctcatcccaaagtacatggtaatgagctggacggcttgtaccctgaatccca 431
Query: 612 gcatggctgcacaggtagaaatcaaactcggttggatggcaaatctttgagtccaccaca 671
||||| || |||| ||||| || ||||| ||||| || ||||| ||||||||||| |||
Sbjct: 430 gcatgactacacaaatagaagtcgaactctgttgggtgacaaatttttgagtccacaaca 371
Query: 672 gt 673
||
Sbjct: 370 gt 369
>gb|CV231236.1|CV231236 WS0193.B21_O22 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0193_O22 3', mRNA sequence
Length = 875
Score = 139 bits (70), Expect = 2e-031
Identities = 232/286 (81%)
Strand = Plus / Plus
Query: 396 gatccgctgtcacttgtatctggctccatgtaaaaccgagctcggaaggctgccagatga 455
||||||||||| ||| || || |||||||| || ||||||||||| || || |||||
Sbjct: 349 gatccgctgtctgatgtctccggttccatgtagaaacgagctcggaatgcagcaagatgt 408
Query: 456 gcatagtatgcaggaggaacgattgatactgagcgtgtgcacctggcatacgtgtaacac 515
||||| |||||||| || || || || || || || ||||| || ||||| ||||| ||
Sbjct: 409 gcataatatgcaggtggcacaatggaaacagaacgcgtgcatcttgcatatgtgtagcaa 468
Query: 516 aagttgttggtgagagtttgcaacccatcagccgtaaatttgttctcatcccacagaaca 575
| ||||| || |||| |||||||||||||| || || |||||||||||||| || |||
Sbjct: 469 agattgtttgtaagagactgcaacccatcagcagtgaacttgttctcatcccaaagtaca 528
Query: 576 tgataatgggcaggacggcttgttccctgaatgccagcatggctgcacaggtagaaatca 635
|| ||||| || ||||||||||| |||||||| |||||||| || |||| ||||| ||
Sbjct: 529 tggtaatgagctggacggcttgtaccctgaatcccagcatgactacacaaatagaagtcg 588
Query: 636 aactcggttggatggcaaatctttgagtccaccacagtgcccggca 681
||||| ||||| || ||||| ||||||||||| |||||||| ||||
Sbjct: 589 aactctgttgggtgacaaatttttgagtccacgacagtgccaggca 634
Score = 125 bits (63), Expect = 3e-027
Identities = 132/155 (85%)
Strand = Plus / Plus
Query: 732 aacaacctggtgtgatgacgcttctggaccacgacaaaagtaactggaggctggtaatca 791
|||| ||| ||||||||||||||||| ||||| ||||| || |||||||||||||| |
Sbjct: 685 aacagccttgtgtgatgacgcttctgaaccacaacaaatgtcactggaggctggtagttg 744
Query: 792 gactccaatgatgcacaggcctttctaatggcatcaagttcgtacaacagaacttggtag 851
| ||| || || ||||| ||||| | ||| ||||||||||||| ||||| |||||| |||
Sbjct: 745 ggctctaaagaagcacatgccttacgaatagcatcaagttcgtgcaacaaaacttgatag 804
Query: 852 aactgtccctcactgacaccatccctgtagaatat 886
||||| || |||||||||||||| |||||||||||
Sbjct: 805 aactgcccttcactgacaccatctctgtagaatat 839
>gb|BU835074.1|BU835074 T069C02 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 727
Score = 135 bits (68), Expect = 4e-030
Identities = 195/236 (82%), Gaps = 1/236 (0%)
Strand = Plus / Minus
Query: 730 caaacaacctggtgtgatgacgcttctggaccacgacaaaagtaactggaggctggtaat 789
|||||| ||| ||||||||||||||||| ||||| ||||| || || |||||||||||||
Sbjct: 682 caaacagccttgtgtgatgacgcttctgaaccacaacaaatgtcacaggaggctggtaat 623
Query: 790 cagactccaatgatgcacaggcctttctaatggcatcaagttcgtacaacagaacttggt 849
| ||| || || ||||| ||||| | ||| ||||| ||||||||||||| |||||| |
Sbjct: 622 tgggctctaaagaagcacatgccttacgaatagcatcgagttcgtacaacaaaacttgat 563
Query: 850 agaactgtccctcactgacaccatccctgtagaatatgatcctcttgggtttttgtccag 909
| |||||||| |||||||||||||| ||||||||||| || | || || || ||||| |
Sbjct: 562 aaaactgtccttcactgacaccatctctgtagaatattattcgctgtggcttctgtccgg 503
Query: 910 tcgccctccagaaagaaatgagaaggttccctaatcatgccaccagagacagtccc 965
| ||||| | ||| || ||||||| ||||| | |||||||||||||| || |||||
Sbjct: 502 ttgccctacggaaggatatgagaa-gttccttgatcatgccaccagacactgtccc 448
>gb|AJ772440.1|AJ772440 AJ772440 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700006E12F1, mRNA sequence
Length = 418
Score = 135 bits (68), Expect = 4e-030
Identities = 227/280 (81%)
Strand = Plus / Minus
Query: 415 ctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggaggaa 474
|||||||| ||||||||||||| || || || || | ||| ||||||||||| |||||||
Sbjct: 344 ctggctccgtgtaaaaccgagcacgaaaagcagctaaatgcgcatagtatgctggaggaa 285
Query: 475 cgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagttt 534
| | ||| || ||||| |||||||| ||||||||||| || | ||||| || | || |
Sbjct: 284 ctactgaaacagagcgagtgcacctagcatacgtgtagcagagattgtttgtcaaagact 225
Query: 535 gcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacggc 594
| | |||||||| || || |||||||||||||||| ||||||||| || || || | |
Sbjct: 224 ggattccatcagctgtgaagttgttctcatcccacaaaacatgatagtgagctggcctac 165
Query: 595 ttgttccctgaatgccagcatggctgcacaggtagaaatcaaactcggttggatggcaaa 654
|||| |||||||| ||||||||||| || || ||||| |||||||| |||||||| || |
Sbjct: 164 ttgtcccctgaataccagcatggctacagagatagaagtcaaactctgttggatgacaga 105
Query: 655 tctttgagtccaccacagtgcccggcagtatgttgccact 694
| || || || ||||| ||||| ||||||||||| |||||
Sbjct: 104 ttttagaatcaaccacggtgccaggcagtatgtttccact 65
>gb|BU896276.1|BU896276 X038C04 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 679
Score = 127 bits (64), Expect = 9e-028
Identities = 211/260 (81%)
Strand = Plus / Minus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggagga 473
||||| |||||||| || |||||||| || || || |||||||||||||||||||| ||
Sbjct: 288 tctggttccatgtagaaacgagctcgaaatgcagcaagatgagcatagtatgcaggtggc 229
Query: 474 acgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagtt 533
|| || || || || || ||||| | ||||| ||||| |||| ||||| || || |
Sbjct: 228 acaatggaaacagaacgcgtgcatcgtgcatatgtgtagcacagattgtttgtcagggac 169
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||||||||||||| ||||| |||||||||||||| || ||||| ||||| || ||||||
Sbjct: 168 tgcaacccatcagcagtaaacttgttctcatcccaaagtacatggtaatgagccggacgg 109
Query: 594 cttgttccctgaatgccagcatggctgcacaggtagaaatcaaactcggttggatggcaa 653
||||| |||||||| || ||||| || |||| ||||| || || || || ||||||||
Sbjct: 108 cttgtgccctgaatcccggcatgactacacaaatagaagtcgaattcagtaggatggcag 49
Query: 654 atctttgagtccaccacagt 673
||||| |||||||| |||||
Sbjct: 48 atcttcgagtccacaacagt 29
Score = 50.1 bits (25), Expect = 2e-004
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 261 tagcagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctcacagca 320
|||||||||||||| || ||||| || || ||||| | ||| ||||| ||||||||||||
Sbjct: 445 tagcagtagaacataacccgcttgacattctccttcaaggcgggtaagggcctcacagca 386
Query: 321 acatt 325
||||
Sbjct: 385 gcatt 381
>gb|BU896297.1|BU896297 X038E11 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 666
Score = 127 bits (64), Expect = 9e-028
Identities = 211/260 (81%)
Strand = Plus / Minus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggagga 473
||||| |||||||| || |||||||| || || || |||||||||||||||||||| ||
Sbjct: 288 tctggttccatgtagaaacgagctcgaaatgcagcaagatgagcatagtatgcaggtggc 229
Query: 474 acgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagtt 533
|| || || || || || ||||| | ||||| ||||| |||| ||||| || || |
Sbjct: 228 acaatggaaacagaacgcgtgcatcgtgcatatgtgtagcacagattgtttgtcagggac 169
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||||||||||||| ||||| |||||||||||||| || ||||| ||||| || ||||||
Sbjct: 168 tgcaacccatcagcagtaaacttgttctcatcccaaagtacatggtaatgagccggacgg 109
Query: 594 cttgttccctgaatgccagcatggctgcacaggtagaaatcaaactcggttggatggcaa 653
||||| |||||||| || ||||| || |||| ||||| || || || || ||||||||
Sbjct: 108 cttgtgccctgaatcccggcatgactacacaaatagaagtcgaattcagtaggatggcag 49
Query: 654 atctttgagtccaccacagt 673
||||| |||||||| |||||
Sbjct: 48 atcttcgagtccacaacagt 29
Score = 50.1 bits (25), Expect = 2e-004
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 261 tagcagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctcacagca 320
|||||||||||||| || ||||| || || ||||| | ||| ||||| ||||||||||||
Sbjct: 444 tagcagtagaacataacccgcttgacattctccttcaaggcgggtaagggcctcacagca 385
Query: 321 acatt 325
||||
Sbjct: 384 gcatt 380
>gb|CK097248.1|CK097248 UB44DPH02.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB44DPH02 3', mRNA sequence
Length = 762
Score = 127 bits (64), Expect = 9e-028
Identities = 211/260 (81%)
Strand = Plus / Plus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggagga 473
||||| |||||||| || ||||||||||| || || ||||| || ||||||||||| ||
Sbjct: 232 tctggttccatgtagaaacgagctcggaatgcagcaagatgtgcgtagtatgcaggtggc 291
Query: 474 acgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagtt 533
|| || || || || || ||||| || ||||| ||||| || | ||||| || || |
Sbjct: 292 acaatggaaacagaacgcgtgcatcttgcatatgtgtagcaaagattgtttgtaagggac 351
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||||||||||||| || || |||||||| ||||| || ||||| ||||| || ||||||
Sbjct: 352 tgcaacccatcagcagtgaacttgttctcgtcccaaagtacatggtaatgagctggacgg 411
Query: 594 cttgttccctgaatgccagcatggctgcacaggtagaaatcaaactcggttggatggcaa 653
||||| |||||||| |||||||| || |||| ||||| |||||||| ||||| || |||
Sbjct: 412 cttgtaccctgaatcccagcatgactacacaaatagaagtcaaactctgttgggtgacaa 471
Query: 654 atctttgagtccaccacagt 673
|| ||||||||||| |||||
Sbjct: 472 atttttgagtccacgacagt 491
Score = 107 bits (54), Expect = 8e-022
Identities = 131/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 730 caaacaacctggtgtgatgacgcttctggaccacgacaaaagtaactggaggctggtaat 789
|||||| ||| ||||||||||||||||||||||| ||||| || |||||||||||||| |
Sbjct: 548 caaacagccttgtgtgatgacgcttctggaccacaacaaatgtcactggaggctggtagt 607
Query: 790 cagactccaatgatgcacaggcctttctaatggcatcaagttcgtacaacagaacttggt 849
| ||| || || |||| ||||| | ||| ||||||||||||||| ||| |||||| |
Sbjct: 608 tgggctctaa-gaaacacatgccttccgaatagcatcaagttcgtac-acaaaacttgat 665
Query: 850 agaactgtccctcactgacaccatccctgtagaa 883
||||||| || |||||||||||||| ||||||||
Sbjct: 666 agaactgcccttcactgacaccatctctgtagaa 699
Score = 42.1 bits (21), Expect = 0.039
Identities = 57/69 (82%)
Strand = Plus / Plus
Query: 264 cagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctcacagcaaca 323
||||||||||| || ||||| || || ||||| | |||||| | |||||||||||| ||
Sbjct: 79 cagtagaacataacccgcttgacattctccttcaaggcaggaaggggcctcacagcagca 138
Query: 324 tttgcagca 332
|| ||||||
Sbjct: 139 ttagcagca 147
>gb|AJ772710.1|AJ772710 AJ772710 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700011G03F1, mRNA sequence
Length = 295
Score = 127 bits (64), Expect = 9e-028
Identities = 194/236 (82%), Gaps = 1/236 (0%)
Strand = Plus / Plus
Query: 730 caaacaacctggtgtgatgacgcttctggaccacgacaaaagtaactggaggctggtaat 789
|||||| ||| ||||||||||||||||| ||||| ||||| || || ||||||||||| |
Sbjct: 57 caaacagccttgtgtgatgacgcttctgaaccacaacaaatgtcacaggaggctggtagt 116
Query: 790 cagactccaatgatgcacaggcctttctaatggcatcaagttcgtacaacagaacttggt 849
| ||| || || ||||| ||||| | ||| ||||||||||| ||||||| |||||| |
Sbjct: 117 tgggctctaaagaagcacatgccttgcgaatagcatcaagttcatacaacaaaacttgat 176
Query: 850 agaactgtccctcactgacaccatccctgtagaatatgatcctcttgggtttttgtccag 909
| |||||||| |||||||||||||| ||||||||||| || | || || || || ||||
Sbjct: 177 aaaactgtccttcactgacaccatctctgtagaatataattcgctgtggcttctgcccag 236
Query: 910 tcgccctccagaaagaaatgagaaggttccctaatcatgccaccagagacagtccc 965
| ||||| | ||| || ||||||| ||||| | |||||||||||||| || |||||
Sbjct: 237 ttgccctacggaaggatatgagaa-gttccttgatcatgccaccagacactgtccc 291
>gb|BU894478.1|BU894478 X010A02 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 650
Score = 121 bits (61), Expect = 5e-026
Identities = 226/281 (80%)
Strand = Plus / Minus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggagga 473
||||| |||||||| || |||||||| || || || |||||||||||||||||||| ||
Sbjct: 301 tctggttccatgtagaaacgagctcgaaatgcagcaagatgagcatagtatgcaggtggc 242
Query: 474 acgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagtt 533
|| || || || || || ||||| | ||||| ||||| |||| ||||| || || |
Sbjct: 241 acaatggaaacagaacgcgtgcatcgtgcatatgtgtagcacagattgtttgtcagggac 182
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||||||||||||| ||||| |||||||||||||| || ||||| || || || ||||||
Sbjct: 181 tgcaacccatcagcagtaaacttgttctcatcccaaagtacatggtagtgagctggacgg 122
Query: 594 cttgttccctgaatgccagcatggctgcacaggtagaaatcaaactcggttggatggcaa 653
||||| |||||||| || ||||| || |||| ||||| || || || || ||||||||
Sbjct: 121 cttgtgccctgaatcccggcatgactacacaaatagaagtcgaattcagtaggatggcag 62
Query: 654 atctttgagtccaccacagtgcccggcagtatgttgccact 694
||||| |||||||| ||||| || |||| ||| || |||||
Sbjct: 61 atcttcgagtccacaacagtaccaggcaatatattcccact 21
Score = 50.1 bits (25), Expect = 2e-004
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 261 tagcagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctcacagca 320
|||||||||||||| || ||||| || || ||||| | ||| ||||| ||||||||||||
Sbjct: 457 tagcagtagaacataacccgcttgacattctccttcaaggcgggtaagggcctcacagca 398
Query: 321 acatt 325
||||
Sbjct: 397 gcatt 393
>gb|CX171314.1|CX171314 G11_69-94_13.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 555
Score = 121 bits (61), Expect = 5e-026
Identities = 226/281 (80%)
Strand = Plus / Minus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggagga 473
|||||||||||||| || |||||||| || || || |||||||||||||||||||| ||
Sbjct: 325 tctggctccatgtagaaacgagctcgaaatgcagcaagatgagcatagtatgcaggtggc 266
Query: 474 acgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagtt 533
|| || || || || || ||||| | ||||| ||||| || | ||||| || || |
Sbjct: 265 acaatggaaacagatcgcgtgcatcgtgcatatgtgtagcaaagattgttcgtcagggac 206
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||| ||||||||| ||||| |||||||||||||| || ||||| ||||| || ||||||
Sbjct: 205 tgcagcccatcagcagtaaacttgttctcatcccaaagtacatggtaatgagctggacgg 146
Query: 594 cttgttccctgaatgccagcatggctgcacaggtagaaatcaaactcggttggatggcaa 653
||||| |||||||| ||||| || || |||| ||||| || || || || ||||||||
Sbjct: 145 cttgtgccctgaatcccagcgtgactacacaaatagaagtcgaattcagtaggatggcag 86
Query: 654 atctttgagtccaccacagtgcccggcagtatgttgccact 694
||||| |||||||| ||||| || |||| ||| || |||||
Sbjct: 85 atcttcgagtccacaacagtaccaggcaatatattcccact 45
Score = 61.9 bits (31), Expect = 4e-008
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 255 caatcttagcagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctc 314
||||| |||||||||||||| || ||||| || || ||||| | ||||||||| ||||||
Sbjct: 487 caatcctagcagtagaacataacccgcttgacattctccttcaaggcaggtaaaggcctc 428
Query: 315 acagcaacatt 325
|||||| ||||
Sbjct: 427 acagcagcatt 417
>gb|BU891188.1|BU891188 P047A12 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 494
Score = 115 bits (58), Expect = 3e-024
Identities = 202/250 (80%)
Strand = Plus / Minus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggagga 473
||||| |||||||| || ||||||||||| || || ||||| || ||||||||||| ||
Sbjct: 250 tctggttccatgtagaaacgagctcggaatgcagcaagatgtgcgtagtatgcaggtggc 191
Query: 474 acgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagtt 533
|| || || || || || ||||| || ||||| ||||| || | ||||| || || |
Sbjct: 190 acaatggaaacagaacgcgtgcatcttgcatatgtgtagcaaagattgtttgtaagggac 131
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||||||||||||| || || |||||||| ||||| || ||||| ||||| || ||||||
Sbjct: 130 tgcaacccatcagcagtgaacttgttctcgtcccaaagtacatggtaatgagctggacgg 71
Query: 594 cttgttccctgaatgccagcatggctgcacaggtagaaatcaaactcggttggatggcaa 653
||||| |||||||| |||||||| || ||||| ||||| | |||||| ||||| || |||
Sbjct: 70 cttgtaccctgaatcccagcatgactacacagatagaagttaaactccgttgggtgacaa 11
Query: 654 atctttgagt 663
|| |||||||
Sbjct: 10 atttttgagt 1
Score = 42.1 bits (21), Expect = 0.039
Identities = 57/69 (82%)
Strand = Plus / Minus
Query: 264 cagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctcacagcaaca 323
||||||||||| || ||||| || || ||||| | |||||| | |||||||||||| ||
Sbjct: 403 cagtagaacataacccgcttgacattctccttcaaggcaggaaggggcctcacagcagca 344
Query: 324 tttgcagca 332
|| ||||||
Sbjct: 343 ttagcagca 335
>gb|BU898140.1|BU898140 X075D09 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 623
Score = 113 bits (57), Expect = 1e-023
Identities = 225/281 (80%)
Strand = Plus / Minus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggagga 473
||||| |||||||| || |||||||| || || | |||||||||||||||||||| ||
Sbjct: 362 tctggttccatgtagaaacgagctcgaaatgcaacaagatgagcatagtatgcaggtggc 303
Query: 474 acgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagtt 533
|| || || || || || ||||| | ||||| ||||| |||| ||||| || || |
Sbjct: 302 acaatggaaacagaacgcgtgcatcgcgcatatgtgtagcacagattgtttgtcagggac 243
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||||||||||||| ||||| |||||||||||||| || ||||| || || || ||||||
Sbjct: 242 tgcaacccatcagcagtaaacttgttctcatcccaaagtacatggtagtgagctggacgg 183
Query: 594 cttgttccctgaatgccagcatggctgcacaggtagaaatcaaactcggttggatggcaa 653
||||| |||||||| || ||||| || |||| ||||| || || || || ||||||||
Sbjct: 182 cttgtgccctgaatcccggcatgactacacaaatagaagtcgaattcagtaggatggcag 123
Query: 654 atctttgagtccaccacagtgcccggcagtatgttgccact 694
||||| |||||||| ||||| || |||| ||| || |||||
Sbjct: 122 atcttcgagtccacaacagtaccaggcaatatattcccact 82
Score = 50.1 bits (25), Expect = 2e-004
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 261 tagcagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctcacagca 320
|||||||||||||| || ||||| || || ||||| | ||| ||||| ||||||||||||
Sbjct: 519 tagcagtagaacataacccgcttgacattctccttcaaggcgggtaagggcctcacagca 460
Query: 321 acatt 325
||||
Sbjct: 459 gcatt 455
>gb|CK099351.1|CK099351 A063P66.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A063P66 5', mRNA sequence
Length = 546
Score = 111 bits (56), Expect = 5e-023
Identities = 210/260 (80%), Gaps = 1/260 (0%)
Strand = Plus / Minus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggagga 473
||||| |||||||| || |||||||| || || || |||||||||||||||||||| ||
Sbjct: 278 tctggttccatgtagaaacgagctcgaaatgcagcaagatgagcatagtatgcaggtggc 219
Query: 474 acgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagtt 533
|| || || || || || ||||| | ||||| ||||| |||| ||||| || || |
Sbjct: 218 acaatggaaacagaacgcgtgcatcgtgcatatgtgtagcacagattgtttgtcagggac 159
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||||||||||||| ||||| |||||||||||||| || ||||| ||||| || ||||||
Sbjct: 158 tgcaacccatcagcagtaaacttgttctcatcccaaagtacatggtaatgagccggacgg 99
Query: 594 cttgttccctgaatgccagcatggctgcacaggtagaaatcaaactcggttggatggcaa 653
||||| |||||||| || ||||| || |||| ||||| || || || | | |||||||
Sbjct: 98 cttgtgccctgaatcccggcatgactacacaaatagaagtcgaattcag-tagatggcag 40
Query: 654 atctttgagtccaccacagt 673
||||| |||||||| |||||
Sbjct: 39 atcttcgagtccacaacagt 20
Score = 50.1 bits (25), Expect = 2e-004
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 261 tagcagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctcacagca 320
|||||||||||||| || ||||| || || ||||| | ||| ||||| ||||||||||||
Sbjct: 434 tagcagtagaacataacccgcttgacattctccttcaaggcgggtaagggcctcacagca 375
Query: 321 acatt 325
||||
Sbjct: 374 gcatt 370
>gb|CK117051.1|CK117051 B024P66 Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B024P66 5', mRNA sequence
Length = 276
Score = 111 bits (56), Expect = 5e-023
Identities = 119/140 (85%)
Strand = Plus / Minus
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||||||||||||| || || |||||||| ||||| || ||||| ||||| || ||||||
Sbjct: 259 tgcaacccatcagcagtgaacttgttctcgtcccaaagtacatggtaatgagctggacgg 200
Query: 594 cttgttccctgaatgccagcatggctgcacaggtagaaatcaaactcggttggatggcaa 653
||||| |||||||| |||||||| || |||| ||||| |||||||| ||||| || |||
Sbjct: 199 cttgtaccctgaatcccagcatgactacacaaatagaagtcaaactctgttgggtgacaa 140
Query: 654 atctttgagtccaccacagt 673
|| ||||||||||| |||||
Sbjct: 139 atttttgagtccacgacagt 120
Score = 60.0 bits (30), Expect = 2e-007
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 730 caaacaacctggtgtgatgacgcttctggaccacgacaaaagtaactggaggctggta 787
|||||| ||| ||||||||||||||||||||||| ||||| || |||||||||||||
Sbjct: 63 caaacagccttgtgtgatgacgcttctggaccacaacaaatgt-cctggaggctggta 7
>gb|CV269160.1|CV269160 WS0207.B21_H21 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0207_H21 3', mRNA sequence
Length = 688
Score = 111 bits (56), Expect = 5e-023
Identities = 182/224 (81%)
Strand = Plus / Plus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggagga 473
|||||||||||||| || |||||||| || || || |||||||||||||||||||| ||
Sbjct: 459 tctggctccatgtagaaacgagctcgaaatgcagcaagatgagcatagtatgcaggtggc 518
Query: 474 acgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagtt 533
|| || || || || || ||||| | ||||| ||||| || | ||||| || || |
Sbjct: 519 acaatggaaacagatcgcgtgcatcgtgcatatgtgtagcaaagattgtttgtcagggac 578
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||| ||||||||| ||||| |||||||||||||| || ||||| ||||| || ||||||
Sbjct: 579 tgcagcccatcagcagtaaacttgttctcatcccaaagtacatggtaatgagctggacgg 638
Query: 594 cttgttccctgaatgccagcatggctgcacaggtagaaatcaaa 637
||||| |||||||| |||||||| || |||| ||||| |||||
Sbjct: 639 cttgtgccctgaatcccagcatgactacacaaatagaagtcaaa 682
Score = 58.0 bits (29), Expect = 7e-007
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 261 tagcagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctcacagca 320
|||||||||||||| || ||||| || || ||||| | ||||||||| ||||||||||||
Sbjct: 303 tagcagtagaacataacccgcttgacattctccttcaaggcaggtaaaggcctcacagca 362
Query: 321 acatt 325
||||
Sbjct: 363 gcatt 367
>gb|CV227387.1|CV227387 WS0167.B21_A17 PT-DX-A-7 Populus trichocarpa cDNA clone WS0167_A17
3', mRNA sequence
Length = 709
Score = 105 bits (53), Expect = 3e-021
Identities = 197/245 (80%)
Strand = Plus / Minus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggagga 473
|||||||||||||| || |||||||| || || || |||||||||||||||||||| ||
Sbjct: 247 tctggctccatgtagaaacgagctcgaaatgcagcaagatgagcatagtatgcaggtggc 188
Query: 474 acgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagtt 533
|| || || || || || ||||| | ||||| ||||| || | ||||| || || |
Sbjct: 187 acaatggaaacagatcgcgtgcatcgtgcatatgtgtagcaaagattgttcgtcagggac 128
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||| ||||||||| ||||| |||||||||||||| || ||||| ||||| || ||||||
Sbjct: 127 tgcagcccatcagcagtaaacttgttctcatcccaaagtacatggtaatgagctggacgg 68
Query: 594 cttgttccctgaatgccagcatggctgcacaggtagaaatcaaactcggttggatggcaa 653
||||| |||||||| ||||| || || |||| ||||| || || || || ||||||||
Sbjct: 67 cttgtgccctgaatcccagcgtgactacacaaatagaagtcgaattcagtaggatggcag 8
Query: 654 atctt 658
|||||
Sbjct: 7 atctt 3
Score = 58.0 bits (29), Expect = 7e-007
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 261 tagcagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctcacagca 320
|||||||||||||| || ||||| || || ||||| | ||||||||| ||||||||||||
Sbjct: 403 tagcagtagaacataacccgcttgacattctccttcaaggcaggtaaaggcctcacagca 344
Query: 321 acatt 325
||||
Sbjct: 343 gcatt 339
>gb|AI166241.1|AI166241 a063p66u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 382
Score = 103 bits (52), Expect = 1e-020
Identities = 204/254 (80%), Gaps = 1/254 (0%)
Strand = Plus / Minus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggagga 473
||||| |||||||| || |||||||| || || || |||||||||||||||||||| ||
Sbjct: 253 tctggttccatgtagaaacgagctcgaaatgcagcaagatgagcatagtatgcaggtggc 194
Query: 474 acgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagtt 533
|| || || || || || ||||| | |||| ||||| |||| ||||| || || |
Sbjct: 193 acaatggaaacagaacgcgtgcatcgtgcatntgtgtagcacagattgtttgtcagggac 134
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||||||||||||| ||||| |||||||||||||| || ||||| ||||| | ||||||
Sbjct: 133 tgcaacccatcagcagtaaacttgttctcatcccaaagtacatggtaatganc-ggacgg 75
Query: 594 cttgttccctgaatgccagcatggctgcacaggtagaaatcaaactcggttggatggcaa 653
||||| |||||||| || ||||| || |||| ||||| || || || || ||||||||
Sbjct: 74 cttgtgccctgaatcccggcatgactacacaaatagaagtcgaattcagtaggatggcag 15
Query: 654 atctttgagtccac 667
||||| ||||||||
Sbjct: 14 atcttcgagtccac 1
>gb|CV241850.1|CV241850 WS02513.B21_G18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02513_G18 3', mRNA sequence
Length = 677
Score = 103 bits (52), Expect = 1e-020
Identities = 163/200 (81%)
Strand = Plus / Plus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggagga 473
|||||||||||||| || |||||||| || || || |||||||||||||||||||| ||
Sbjct: 448 tctggctccatgtagaaacgagctcgaaatgcagcaagatgagcatagtatgcaggtggc 507
Query: 474 acgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagtt 533
|| || || || || || ||||| | ||||| ||||| || | ||||| || || |
Sbjct: 508 acaatggaaacagatcgcgtgcatcgtgcatatgtgtagcaaagattgtttgtcagggac 567
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||| ||||||||| ||||| |||||||||||||| || ||||| ||||| || ||||||
Sbjct: 568 tgcagcccatcagcagtaaacttgttctcatcccaaagtacatggtaatgagctggacgg 627
Query: 594 cttgttccctgaatgccagc 613
||||| |||||||| |||||
Sbjct: 628 cttgtgccctgaatcccagc 647
Score = 58.0 bits (29), Expect = 7e-007
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 261 tagcagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctcacagca 320
|||||||||||||| || ||||| || || ||||| | ||||||||| ||||||||||||
Sbjct: 292 tagcagtagaacataacccgcttgacattctccttcaaggcaggtaaaggcctcacagca 351
Query: 321 acatt 325
||||
Sbjct: 352 gcatt 356
>gb|BU811238.1|BU811238 UL81TG02 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 544
Score = 89.7 bits (45), Expect = 2e-016
Identities = 191/237 (80%), Gaps = 2/237 (0%)
Strand = Plus / Minus
Query: 730 caaacaacctggtgtgatgacgcttctggaccacgacaaaagt-aactggaggctggtaa 788
|||||| ||| ||||||| ||||||||| ||||| ||||| || ||| ||||||||||||
Sbjct: 499 caaacagccttgtgtgataacgcttctgaaccacaacaaatgtgaacaggaggctggtaa 440
Query: 789 tcagactccaatgatgcacaggcctttctaatggcatcaagttcgtacaacagaacttgg 848
| | ||| || | ||||| ||||| | ||| ||||| ||||||||| || ||||||
Sbjct: 439 ttgggctctaaaggagcacatgccttacgaatagcatcgagttcgtaccaccaaacttga 380
Query: 849 tagaactgtccctcactgacaccatccctgtagaatatgatcctcttgggtttttgtcca 908
|| |||||||| ||||||||||||| ||||||||||| || | || || || |||||
Sbjct: 379 taaaactgtccttcactgacaccatatctgtagaatattattcgctgtgggttctgtccg 320
Query: 909 gtcgccctccagaaagaaatgagaaggttccctaatcatgccaccagagacagtccc 965
|| ||||| | ||| || ||||||| ||||| | |||||||||||||| || |||||
Sbjct: 319 gttgccctacggaaggatatgagaa-gttccttgatcatgccaccagacactgtccc 264
>gb|BU895787.1|BU895787 X031A06 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 568
Score = 89.7 bits (45), Expect = 2e-016
Identities = 150/185 (81%)
Strand = Plus / Minus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggagga 473
||||| |||||||| || |||||||| || || || |||||||||||||||||||| ||
Sbjct: 190 tctggttccatgtagaaacgagctcgaaatgcagcaagatgagcatagtatgcaggtggc 131
Query: 474 acgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagtt 533
|| || || || || || ||||| | ||||| ||||| |||| ||||| || || |
Sbjct: 130 acaatggaaacagaacgcgtgcatcgtgcatatgtgtagcacagattgtttgtcagggac 71
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||||||||||||| ||||| ||||| |||||||| || ||||| ||||| || ||||||
Sbjct: 70 tgcaacccatcagcagtaaacttgttatcatcccaaagtacatggtaatgagccggacgg 11
Query: 594 cttgt 598
|||||
Sbjct: 10 cttgt 6
Score = 50.1 bits (25), Expect = 2e-004
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 261 tagcagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctcacagca 320
|||||||||||||| || ||||| || || ||||| | ||| ||||| ||||||||||||
Sbjct: 346 tagcagtagaacataacccgcttgacattctccttcaaggcgggtaagggcctcacagca 287
Query: 321 acatt 325
||||
Sbjct: 286 gcatt 282
>gb|CV276089.1|CV276089 WS0178.B21.1_J13 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0178_J13 3', mRNA sequence
Length = 618
Score = 89.7 bits (45), Expect = 2e-016
Identities = 150/185 (81%)
Strand = Plus / Plus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggagga 473
|||||||||||||| || |||||||| || || || |||||||||||||||||||| ||
Sbjct: 433 tctggctccatgtagaaacgagctcgaaatgcagcaagatgagcatagtatgcaggtggc 492
Query: 474 acgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagtt 533
|| || || || || || ||||| | ||||| ||||| || | ||||| || || |
Sbjct: 493 acaatggaaacagatcgcgtgcatcgtgcatatgtgtagcaaagattgttcgtcagggac 552
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||| ||||||||| ||||| |||||||||||||| || ||||| ||||| || ||||||
Sbjct: 553 tgcagcccatcagcagtaaacttgttctcatcccaaagtacatggtaatgagctggacgg 612
Query: 594 cttgt 598
|||||
Sbjct: 613 cttgt 617
Score = 58.0 bits (29), Expect = 7e-007
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 261 tagcagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctcacagca 320
|||||||||||||| || ||||| || || ||||| | ||||||||| ||||||||||||
Sbjct: 277 tagcagtagaacataacccgcttgacattctccttcaaggcaggtaaaggcctcacagca 336
Query: 321 acatt 325
||||
Sbjct: 337 gcatt 341
>gb|CK100043.1|CK100043 B006P29.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B006P29 5', mRNA sequence
Length = 475
Score = 87.7 bits (44), Expect = 7e-016
Identities = 128/156 (82%)
Strand = Plus / Minus
Query: 540 ccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacggcttgtt 599
|||||||| || || |||||||||||||||| ||||||||| || || || | ||||||
Sbjct: 359 ccatcagctgtgaaattgttctcatcccacaaaacatgatagtgtgctggtctacttgtt 300
Query: 600 ccctgaatgccagcatggctgcacaggtagaaatcaaactcggttggatggcaaatcttt 659
|||||||| ||||||||||| || || || || ||||| || |||||||| || || ||
Sbjct: 299 ccctgaataccagcatggctacagagataaaagtcaaattccgttggatgacagatttta 240
Query: 660 gagtccaccacagtgcccggcagtatgttgccactt 695
|| || ||||||||||| || | |||||| ||||||
Sbjct: 239 gaatcaaccacagtgccaggtaatatgtttccactt 204
>gb|CK110333.1|CK110333 N055G06 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA clone N055G06 5', mRNA sequence
Length = 826
Score = 87.7 bits (44), Expect = 7e-016
Identities = 120/144 (83%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 822 gcatcaagttcgtacaacagaacttggtagaactgtccctcactgacaccatccctgtag 881
||||| ||||||||||||| |||||| || |||||||| |||||||||||||| ||||||
Sbjct: 825 gcatcgagttcgtacaacaaaacttgataaaactgtccttcactgacaccatctctgtag 766
Query: 882 aatatgatcctcttgggtttttgtccagtcgccctccagaaagaaatgagaaggttccct 941
||||| || | || || || ||||| || ||||| | ||| || ||||||| ||||| |
Sbjct: 765 aatattattcgctgtggcttctgtccggttgccctacggaaggatatgagaa-gttcctt 707
Query: 942 aatcatgccaccagagacagtccc 965
|||||||||||||| || |||||
Sbjct: 706 gatcatgccaccagacactgtccc 683
>gb|DN488212.1|DN488212 R041G07.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R041G07 3', mRNA sequence
Length = 811
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 444 gctgccagatgagcatagtatgcaggaggaacgattgatactgagcgtgtgcacctggca 503
||||||||||||||||| ||||| ||||| || || || || || || ||||| || |||
Sbjct: 400 gctgccagatgagcataatatgcgggaggcactatggaaacagaccgagtgcatcttgca 459
Query: 504 tacgtgtaacacaagttgttggtgagagtttgcaacccatcagccgtaaatttgttctca 563
|||||||| ||||| ||||||||||| ||||| || ||||||| | || ||||| |||
Sbjct: 460 tacgtgtagcacaaattgttggtgagggtttgtaaaccatcagaactgaagttgttttca 519
Query: 564 tcccacagaacatgataatgggcaggacggcttgttccctgaatgccagcatggctgcac 623
|| ||| || || ||||| | ||| | ||| ||||||||||| |||||||| |||
Sbjct: 520 tcaaacaacacgtggtaatgtgtaggtctgctggttccctgaattccagcatgactgtta 579
Query: 624 aggtagaaatcaaactcggttggatggcaaat 655
|||||||| |||||||| || || ||||||||
Sbjct: 580 aggtagaagtcaaactctgtagggtggcaaat 611
>gb|CK096964.1|CK096964 UB34DPA12.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB34DPA12 3', mRNA sequence
Length = 646
Score = 81.8 bits (41), Expect = 5e-014
Identities = 164/205 (80%)
Strand = Plus / Plus
Query: 415 ctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggaggaa 474
|||||||| ||||||| ||||| || || || || | ||| ||||||||||| |||||||
Sbjct: 336 ctggctccgtgtaaaatcgagcacgaaaagcagctaaatgtgcatagtatgcgggaggaa 395
Query: 475 cgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagttt 534
| | ||| || ||||| |||||||| || || |||||||| | ||||| || | | |
Sbjct: 396 ccactgaaacagagcgcgtgcacctcgcgtatgtgtaacagagattgtttgtcaaggact 455
Query: 535 gcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacggc 594
| | |||||||| || || |||||||||||||||| ||||||||| || || || | |
Sbjct: 456 ggattccatcagctgtgaaattgttctcatcccacaaaacatgatagtgtgctggtctac 515
Query: 595 ttgttccctgaatgccagcatggct 619
||||||||||||| |||||||||||
Sbjct: 516 ttgttccctgaataccagcatggct 540
>gb|CN519268.1|CN519268 GQ0103.B3_C13 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0103_C13 5', mRNA sequence
Length = 318
Score = 81.8 bits (41), Expect = 5e-014
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 822 gcatcaagttcgtacaacagaacttggtagaactgtccctcactgacaccatccctgtag 881
|||||||| |||||||||| |||||| || |||||||| |||||||||||||| ||||||
Sbjct: 260 gcatcaagctcgtacaacaaaacttgataaaactgtccttcactgacaccatctctgtag 201
Query: 882 aatat 886
|||||
Sbjct: 200 aatat 196
>gb|CN524305.1|CN524305 GQ015M13.T3_E09 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M13_E09 5', mRNA sequence
Length = 849
Score = 79.8 bits (40), Expect = 2e-013
Identities = 214/272 (78%)
Strand = Plus / Minus
Query: 423 atgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggaggaacgattgat 482
|||||| ||||||| | || ||||||| ||| || || |||||||| || || || ||
Sbjct: 541 atgtaataccgagccctaaaagctgccaaatgggcgtaatatgcagggggcactatggaa 482
Query: 483 actgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagtttgcaaccca 542
|| || || ||||| || ||||||||||| ||||| ||||| ||||| ||||| || |||
Sbjct: 481 acagaccgagtgcatcttgcatacgtgtagcacaaattgtttgtgagggtttgtaagcca 422
Query: 543 tcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacggcttgttccc 602
||||| || || ||||| ||||| ||| ||||| || || | ||| | ||| ||||||
Sbjct: 421 tcagcagtgaagttgttttcatcaaacaatacatggtagtgtgtaggtctgctagttccc 362
Query: 603 tgaatgccagcatggctgcacaggtagaaatcaaactcggttggatggcaaatctttgag 662
||||| ||||| || ||| ||||||||||||||||| || || |||||||| || | |
Sbjct: 361 tgaattccagcgtgactgttaaggtagaaatcaaactctgtagggtggcaaattttagtg 302
Query: 663 tccaccacagtgcccggcagtatgttgccact 694
||||| || ||||| || || || ||||||||
Sbjct: 301 tccacgactgtgcctggtaggatattgccact 270
>gb|DN500128.1|DN500128 UB48DPE03.5pR Populus active cambium cDNA library Populus tremula
cDNA clone UB48DPE03 5', mRNA sequence
Length = 522
Score = 77.8 bits (39), Expect = 7e-013
Identities = 126/155 (81%)
Strand = Plus / Minus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggagga 473
||||| |||||||| || |||||||| || || || |||||||||||||||||||| ||
Sbjct: 181 tctggttccatgtagaaacgagctcgaaatgcagcaagatgagcatagtatgcaggtggc 122
Query: 474 acgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagtt 533
|| || || || || || ||||| | ||||| ||||| |||| ||||| || || |
Sbjct: 121 acaatggaaacagaacgcgtgcatcgtgcatatgtgtagcacagattgtttgtcagggac 62
Query: 534 tgcaacccatcagccgtaaatttgttctcatccca 568
|||||||||||||| ||||| ||||||||||||||
Sbjct: 61 tgcaacccatcagcagtaaacttgttctcatccca 27
>gb|BU819274.1|BU819274 UA41BPG08 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 627
Score = 75.8 bits (38), Expect = 3e-012
Identities = 206/262 (78%)
Strand = Plus / Minus
Query: 415 ctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggaggaa 474
|||||||| ||||||| ||| | || || || || | ||| ||||||||||| |||||||
Sbjct: 266 ctggctccgtgtaaaatcgaacacgaaaagcagctaaatgtgcatagtatgcgggaggaa 207
Query: 475 cgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagttt 534
| | ||| || ||||| |||||||| || || |||||||| | ||||| || | | |
Sbjct: 206 ccactgaaacagagcgcgtgcaccttgcgtatgtgtaacagagattgtttgtcaaggact 147
Query: 535 gcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacggc 594
| | |||||||| || || |||||||||||||||| ||||||||| || || || | |
Sbjct: 146 ggattccatcagctgtgaaattgttctcatcccacaaaacatgatagtgtgctggtctac 87
Query: 595 ttgttccctgaatgccagcatggctgcacaggtagaaatcaaactcggttggatggcaaa 654
||||||||||||| ||||||||||| || || || || ||||| || || ||||| || |
Sbjct: 86 ttgttccctgaataccagcatggctacagagataaaagtcaaattccgtcggatgacaga 27
Query: 655 tctttgagtccaccacagtgcc 676
| || || || |||||||||||
Sbjct: 26 ttttagaatcaaccacagtgcc 5
>gb|BU818866.1|BU818866 UA35CPF05 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 503
Score = 69.9 bits (35), Expect = 2e-010
Identities = 161/203 (79%)
Strand = Plus / Minus
Query: 492 gtgcacctggcatacgtgtaacacaagttgttggtgagagtttgcaacccatcagccgta 551
||||| || ||||| ||||| ||||| ||||| ||||| ||||| || |||||||| ||
Sbjct: 285 gtgcatcttgcataggtgtagcacaaattgttagtgagggtttgtaagccatcagcagtg 226
Query: 552 aatttgttctcatcccacagaacatgataatgggcaggacggcttgttccctgaatgcca 611
|| ||||| ||||| ||| ||||| || || | ||| | ||| ||||||||||| |||
Sbjct: 225 aagttgttttcatcaaacaacacatggtagtgtgtaggcctgctagttccctgaattcca 166
Query: 612 gcatggctgcacaggtagaaatcaaactcggttggatggcaaatctttgagtccaccaca 671
|| || ||| ||||||||||||||||| || || |||||||| || | |||||| ||
Sbjct: 165 gcgtgactgttaaggtagaaatcaaactctgtagggtggcaaattttagtgtccacgact 106
Query: 672 gtgcccggcagtatgttgccact 694
||||| || || || ||||||||
Sbjct: 105 gtgcctggtaggatattgccact 83
>gb|AJ770191.1|AJ770191 AJ770191 Populus euphratica leaf 3-6 months, adult Populus
euphratica cDNA clone P0001100008E12F1, mRNA sequence
Length = 423
Score = 69.9 bits (35), Expect = 2e-010
Identities = 125/155 (80%)
Strand = Plus / Minus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcaggagga 473
||||| |||||||| || ||||||||||| || || ||||| |||||||||||||| ||
Sbjct: 159 tctggttccatgtagaaacgagctcggaatgcggcaagatgtgcatagtatgcaggtggc 100
Query: 474 acgattgatactgagcgtgtgcacctggcatacgtgtaacacaagttgttggtgagagtt 533
|| || || || || || ||||| || ||||| ||||| || | ||||| || || |
Sbjct: 99 acaatggaaacagaacgggtgcatcttgcatatgtgtagcaaagattgtttgtaagggac 40
Query: 534 tgcaacccatcagccgtaaatttgttctcatccca 568
|||||||||||||| || || ||||||||||||||
Sbjct: 39 tgcaacccatcagcagtgaacttgttctcatccca 5
>gb|BU821132.1|BU821132 UB19CPE07 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 178
Score = 65.9 bits (33), Expect = 3e-009
Identities = 97/117 (82%), Gaps = 1/117 (0%)
Strand = Plus / Minus
Query: 849 tagaactgtccctcactgacaccatccctgtagaatatgatcctcttgggtttttgtcca 908
|||||||| || |||||||||||||| ||||||||||| || |||| || || || ||
Sbjct: 177 tagaactgcccttcactgacaccatctctgtagaatataattctctgaggcttctgccct 118
Query: 909 gtcgccctccagaaagaaatgagaaggttccctaatcatgccaccagagacagtccc 965
|| || |||| |||||| ||||||| ||||| | |||||||||||||| || |||||
Sbjct: 117 gtggctctccggaaagatatgagaa-gttccttgatcatgccaccagacactgtccc 62
>gb|DN490157.1|DN490157 UB48DPE03.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB48DPE03 3', mRNA sequence
Length = 544
Score = 65.9 bits (33), Expect = 3e-009
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 534 tgcaacccatcagccgtaaatttgttctcatcccacagaacatgataatgggcaggacgg 593
|||||||||||||| ||||| |||||||||||||| || ||||| ||||| || ||||||
Sbjct: 483 tgcaacccatcagcagtaaacttgttctcatcccaaagtacatggtaatgagccggacgg 542
Query: 594 c 594
|
Sbjct: 543 c 543
>gb|CV228921.1|CV228921 WS01911.B21_K08 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01911_K08 3', mRNA sequence
Length = 563
Score = 63.9 bits (32), Expect = 1e-008
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcagg 469
|||||||||||||| || |||||||| || || || ||||||||||||||||||||
Sbjct: 427 tctggctccatgtagaaacgagctcgaaatgcagcaagatgagcatagtatgcagg 482
Score = 58.0 bits (29), Expect = 7e-007
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 261 tagcagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctcacagca 320
|||||||||||||| || ||||| || || ||||| | ||||||||| ||||||||||||
Sbjct: 271 tagcagtagaacataacccgcttgacattctccttcaaggcaggtaaaggcctcacagca 330
Query: 321 acatt 325
||||
Sbjct: 331 gcatt 335
>gb|CV271647.1|CV271647 WS0155.B21_E13 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0155_E13 3', mRNA sequence
Length = 537
Score = 63.9 bits (32), Expect = 1e-008
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcagg 469
|||||||||||||| || |||||||| || || || ||||||||||||||||||||
Sbjct: 449 tctggctccatgtagaaacgagctcgaaatgcagcaagatgagcatagtatgcagg 504
Score = 58.0 bits (29), Expect = 7e-007
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 261 tagcagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctcacagca 320
|||||||||||||| || ||||| || || ||||| | ||||||||| ||||||||||||
Sbjct: 293 tagcagtagaacataacccgcttgacattctccttcaaggcaggtaaaggcctcacagca 352
Query: 321 acatt 325
||||
Sbjct: 353 gcatt 357
>gb|CV274282.1|CV274282 WS0172.B21_M12 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0172_M12 3', mRNA sequence
Length = 699
Score = 63.9 bits (32), Expect = 1e-008
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcagg 469
|||||||||||||| || |||||||| || || || ||||||||||||||||||||
Sbjct: 537 tctggctccatgtagaaacgagctcgaaatgcagcaagatgagcatagtatgcagg 592
Score = 58.0 bits (29), Expect = 7e-007
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 261 tagcagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctcacagca 320
|||||||||||||| || ||||| || || ||||| | ||||||||| ||||||||||||
Sbjct: 381 tagcagtagaacataacccgcttgacattctccttcaaggcaggtaaaggcctcacagca 440
Query: 321 acatt 325
||||
Sbjct: 441 gcatt 445
>gb|BU865267.1|BU865267 S051C12 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 233
Score = 58.0 bits (29), Expect = 7e-007
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 261 tagcagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctcacagca 320
|||||||||||||| || ||||| || || ||||| | ||||||||| ||||||||||||
Sbjct: 117 tagcagtagaacataacccgcttgacattctccttcaaggcaggtaagggcctcacagca 58
Query: 321 acatt 325
||||
Sbjct: 57 gcatt 53
>gb|BU865845.1|BU865845 S059E04 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 291
Score = 58.0 bits (29), Expect = 7e-007
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 261 tagcagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctcacagca 320
|||||||||||||| || ||||| || || ||||| | ||||||||| ||||||||||||
Sbjct: 117 tagcagtagaacataacccgcttgacattctccttcaaggcaggtaagggcctcacagca 58
Query: 321 acatt 325
||||
Sbjct: 57 gcatt 53
>gb|AJ773923.1|AJ773923 AJ773923 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300006F03F1, mRNA sequence
Length = 586
Score = 58.0 bits (29), Expect = 7e-007
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 261 tagcagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctcacagca 320
|||||||||||||| || ||||| || || ||||| | ||||||||| ||||||||||||
Sbjct: 302 tagcagtagaacataacccgcttgacattctccttcaaggcaggtaaaggcctcacagca 243
Query: 321 acatt 325
||||
Sbjct: 242 gcatt 238
Score = 56.0 bits (28), Expect = 3e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcagg 469
|||||||||||||| || || ||||| || || || ||||||||||||||||||||
Sbjct: 146 tctggctccatgtagaaacgggctcgaaatgcagcaagatgagcatagtatgcagg 91
>gb|CV270196.1|CV270196 WS0151.B21_F16 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0151_F16 3', mRNA sequence
Length = 422
Score = 58.0 bits (29), Expect = 7e-007
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 261 tagcagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctcacagca 320
|||||||||||||| || ||||| || || ||||| | ||||||||| ||||||||||||
Sbjct: 352 tagcagtagaacataacccgcttgacattctccttcaaggcaggtaaaggcctcacagca 411
Query: 321 acatt 325
||||
Sbjct: 412 gcatt 416
>gb|BU890263.1|BU890263 P034B07 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 548
Score = 56.0 bits (28), Expect = 3e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 414 tctggctccatgtaaaaccgagctcggaaggctgccagatgagcatagtatgcagg 469
||||| |||||||| || |||||||| || || || ||||||||||||||||||||
Sbjct: 139 tctggttccatgtagaaacgagctcgaaatgcagcaagatgagcatagtatgcagg 84
Score = 50.1 bits (25), Expect = 2e-004
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 261 tagcagtagaacatgacgcgcttcacgttttccttgagggcaggtaatggcctcacagca 320
|||||||||||||| || ||||| || || ||||| | ||| ||||| ||||||||||||
Sbjct: 295 tagcagtagaacataacccgcttgacattctccttcaaggcgggtaagggcctcacagca 236
Query: 321 acatt 325
||||
Sbjct: 235 gcatt 231
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 100,507
Number of Sequences: 369679
Number of extensions: 100507
Number of successful extensions: 28240
Number of sequences better than 0.5: 57
Number of HSP's better than 0.5 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 28079
Number of HSP's gapped (non-prelim): 144
length of query: 977
length of database: 203,408,664
effective HSP length: 19
effective length of query: 958
effective length of database: 196,384,763
effective search space: 188136602954
effective search space used: 188136602954
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)