BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3148257.2.1
(675 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT508024.1|DT508024 WS02419.BR_N16 PTxD-ICC-N-A-14 Popul... 44 0.007
gb|DT512649.1|DT512649 WS02419.B21_N16 PTxD-ICC-N-A-14 Popu... 44 0.007
gb|CV241780.1|CV241780 WS02513.B21_D14 PT-MB-N-A-15 Populus... 42 0.027
gb|CV256028.1|CV256028 WS0242.B21_L15 PTxD-ICC-N-A-14 Popul... 42 0.027
gb|CX177328.1|CX177328 A12_69-35_02.ab1 leaf inoculated wit... 42 0.027
gb|CX177825.1|CX177825 A07_45-60_01.ab1 leaf inoculated wit... 42 0.027
gb|CX177903.1|CX177903 E06_45-36_10.ab1 leaf inoculated wit... 42 0.027
gb|CX178335.1|CX178335 D08_45-11_08.ab1 leaf inoculated wit... 42 0.027
gb|CX178652.1|CX178652 C06_45-10_06.ab1 leaf inoculated wit... 42 0.027
gb|CX178794.1|CX178794 E04_45-117_10.ab1 leaf inoculated wi... 42 0.027
gb|CX179042.1|CX179042 D02_45-112_08.ab1 leaf inoculated wi... 42 0.027
gb|CX181023.1|CX181023 C11_45-12_05.ab1 leaf inoculated wit... 42 0.027
gb|CX182319.1|CX182319 D12_45-63_08.ab1 leaf inoculated wit... 42 0.027
gb|CX185378.1|CX185378 C01_45-56_05.ab1 leaf inoculated wit... 42 0.027
gb|CX185566.1|CX185566 D12_45-83_08.ab1 leaf inoculated wit... 42 0.027
gb|DT508694.1|DT508694 WS02421.BR_K21 PTxD-ICC-N-A-14 Popul... 42 0.027
gb|DT519171.1|DT519171 WS02440.B21_I12 PTxD-ICC-N-A-14 Popu... 42 0.027
gb|BU818663.1|BU818663 UA33CPA03 Populus tremula cambium cD... 40 0.11
gb|CV274458.1|CV274458 WS0173.B21_F11 PTxD-NR-A-8 Populus t... 40 0.11
gb|CX169697.1|CX169697 C09_69-56_05.ab1 leaf inoculated wit... 40 0.11
gb|CX173549.1|CX173549 D02_69-122_08.ab1 leaf inoculated wi... 40 0.11
gb|CX173897.1|CX173897 A12_69-58_02.ab1 leaf inoculated wit... 40 0.11
gb|CX179769.1|CX179769 A06_45-63_02.ab1 leaf inoculated wit... 40 0.11
gb|CX180105.1|CX180105 G01_45-39_13.ab1 leaf inoculated wit... 40 0.11
gb|CX182056.1|CX182056 A11_45-78_01.ab1 leaf inoculated wit... 40 0.11
gb|CX182657.1|CX182657 G10_45-94_14.ab1 leaf inoculated wit... 40 0.11
gb|CX182945.1|CX182945 E01_45-112_09.ab1 leaf inoculated wi... 40 0.11
gb|CX184263.1|CX184263 E07_45-15_09.ab1 leaf inoculated wit... 40 0.11
gb|DT492732.1|DT492732 WS02552.C21_C12 PT-MB-N-A-15 Populus... 40 0.11
gb|DT505958.1|DT505958 WS01812.C21_F04 PTxD-IL-N-A-9 Populu... 40 0.11
gb|CK095773.1|CK095773 UA26CPE05.3pR Populus dormant cambiu... 38 0.42
gb|CN550110.1|CN550110 GQ0242.B3_M19 GQ024 Populus trichoca... 38 0.42
gb|CV254236.1|CV254236 WS0224.B21_H19 PTxD-ICC-A-12 Populus... 38 0.42
gb|CX167807.1|CX167807 B12_69-40_04.ab1 leaf inoculated wit... 38 0.42
gb|CX167903.1|CX167903 F02_69-1_12.ab1 leaf inoculated with... 38 0.42
gb|CX168163.1|CX168163 B04_69-64_04.ab1 leaf inoculated wit... 38 0.42
gb|CX168521.1|CX168521 D08_69-111_08.ab1 leaf inoculated wi... 38 0.42
gb|CX169321.1|CX169321 D10_69-38_08.ab1 leaf inoculated wit... 38 0.42
gb|CX170088.1|CX170088 D03_69-45_07.ab1 leaf inoculated wit... 38 0.42
gb|CX171369.1|CX171369 A09_69-19_01.ab1 leaf inoculated wit... 38 0.42
gb|CX171607.1|CX171607 G07_69-79_13.ab1 leaf inoculated wit... 38 0.42
gb|CX171988.1|CX171988 H05_69-16_15.ab1 leaf inoculated wit... 38 0.42
gb|CX172118.1|CX172118 F10_69-28_12.ab1 leaf inoculated wit... 38 0.42
gb|CX172609.1|CX172609 H03_69-29_15.ab1 leaf inoculated wit... 38 0.42
gb|CX172925.1|CX172925 C03_69-51_05.ab1 leaf inoculated wit... 38 0.42
gb|CX174651.1|CX174651 D04_69-38_08.ab1 leaf inoculated wit... 38 0.42
gb|CX174968.1|CX174968 G11_69-37_13.ab1 leaf inoculated wit... 38 0.42
gb|CX175531.1|CX175531 E02_69-28_10.ab1 leaf inoculated wit... 38 0.42
gb|CX177360.1|CX177360 H04_45-74_16.ab1 leaf inoculated wit... 38 0.42
gb|CX177995.1|CX177995 F11_45-106_11.ab1 leaf inoculated wi... 38 0.42
gb|CX178528.1|CX178528 E03_45-82_09.ab1 leaf inoculated wit... 38 0.42
gb|CX178831.1|CX178831 D01_45-81_07.ab1 leaf inoculated wit... 38 0.42
gb|CX178958.1|CX178958 C02_45-15_06.ab1 leaf inoculated wit... 38 0.42
gb|CX179141.1|CX179141 H07_45-82_15.ab1 leaf inoculated wit... 38 0.42
gb|CX179442.1|CX179442 F11_45-52_11.ab1 leaf inoculated wit... 38 0.42
gb|CX179847.1|CX179847 B10_45-88_04.ab1 leaf inoculated wit... 38 0.42
gb|CX179860.1|CX179860 E09_45-68_09.ab1 leaf inoculated wit... 38 0.42
gb|CX180164.1|CX180164 E11_45-120_09.ab1 leaf inoculated wi... 38 0.42
gb|CX181628.1|CX181628 G04_45-116_14.ab1 leaf inoculated wi... 38 0.42
gb|CX181989.1|CX181989 B03_45-56_03.ab1 leaf inoculated wit... 38 0.42
gb|CX182258.1|CX182258 G08_45-79_14.ab1 leaf inoculated wit... 38 0.42
gb|CX182307.1|CX182307 F10_45-89_12.ab1 leaf inoculated wit... 38 0.42
gb|CX182645.1|CX182645 G09_45-62_13.ab1 leaf inoculated wit... 38 0.42
gb|CX182751.1|CX182751 E03_45-2_09.ab1 leaf inoculated with... 38 0.42
gb|CX183229.1|CX183229 F09_45-82_11.ab1 leaf inoculated wit... 38 0.42
gb|CX183848.1|CX183848 C12_45-121_06.ab1 leaf inoculated wi... 38 0.42
gb|CX184616.1|CX184616 C04_45-72_06.ab1 leaf inoculated wit... 38 0.42
gb|CX184628.1|CX184628 F11_45-120_11.ab1 leaf inoculated wi... 38 0.42
gb|DT485054.1|DT485054 WS02527.B21_C16 PT-MB-N-A-15 Populus... 38 0.42
gb|DT506308.1|DT506308 WS0189.C21_D21 PTxD-IL-N-A-9 Populus... 38 0.42
gb|DT508966.1|DT508966 WS02422.BR_G17 PTxD-ICC-N-A-14 Popul... 38 0.42
gb|DT510995.1|DT510995 WS02429.BR_E10 PTxD-ICC-N-A-14 Popul... 38 0.42
gb|DT513574.1|DT513574 WS02422.B21_G17 PTxD-ICC-N-A-14 Popu... 38 0.42
gb|DT518062.1|DT518062 WS02436.B21_B11 PTxD-ICC-N-A-14 Popu... 38 0.42
>gb|DT508024.1|DT508024 WS02419.BR_N16 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02419_N16 5', mRNA sequence
Length = 770
Score = 44.1 bits (22), Expect = 0.007
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcgaga 22
||||||||||||||||||||||
Sbjct: 5 gaattcggcacgaggctcgaga 26
>gb|DT512649.1|DT512649 WS02419.B21_N16 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02419_N16 3', mRNA sequence
Length = 769
Score = 44.1 bits (22), Expect = 0.007
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1 gaattcggcacgaggctcgaga 22
||||||||||||||||||||||
Sbjct: 765 gaattcggcacgaggctcgaga 744
>gb|CV241780.1|CV241780 WS02513.B21_D14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02513_D14 3', mRNA sequence
Length = 765
Score = 42.1 bits (21), Expect = 0.027
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcgag 21
|||||||||||||||||||||
Sbjct: 387 gaattcggcacgaggctcgag 407
>gb|CV256028.1|CV256028 WS0242.B21_L15 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0242_L15 3', mRNA sequence
Length = 707
Score = 42.1 bits (21), Expect = 0.027
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1 gaattcggcacgaggctcgag 21
|||||||||||||||||||||
Sbjct: 703 gaattcggcacgaggctcgag 683
>gb|CX177328.1|CX177328 A12_69-35_02.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 683
Score = 42.1 bits (21), Expect = 0.027
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcgag 21
|||||||||||||||||||||
Sbjct: 11 gaattcggcacgaggctcgag 31
>gb|CX177825.1|CX177825 A07_45-60_01.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 703
Score = 42.1 bits (21), Expect = 0.027
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcgag 21
|||||||||||||||||||||
Sbjct: 13 gaattcggcacgaggctcgag 33
>gb|CX177903.1|CX177903 E06_45-36_10.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 667
Score = 42.1 bits (21), Expect = 0.027
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcgag 21
|||||||||||||||||||||
Sbjct: 14 gaattcggcacgaggctcgag 34
>gb|CX178335.1|CX178335 D08_45-11_08.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 680
Score = 42.1 bits (21), Expect = 0.027
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcgag 21
|||||||||||||||||||||
Sbjct: 35 gaattcggcacgaggctcgag 55
>gb|CX178652.1|CX178652 C06_45-10_06.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 636
Score = 42.1 bits (21), Expect = 0.027
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcgag 21
|||||||||||||||||||||
Sbjct: 19 gaattcggcacgaggctcgag 39
>gb|CX178794.1|CX178794 E04_45-117_10.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 641
Score = 42.1 bits (21), Expect = 0.027
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcgag 21
|||||||||||||||||||||
Sbjct: 14 gaattcggcacgaggctcgag 34
>gb|CX179042.1|CX179042 D02_45-112_08.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 716
Score = 42.1 bits (21), Expect = 0.027
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcgag 21
|||||||||||||||||||||
Sbjct: 14 gaattcggcacgaggctcgag 34
>gb|CX181023.1|CX181023 C11_45-12_05.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 655
Score = 42.1 bits (21), Expect = 0.027
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcgag 21
|||||||||||||||||||||
Sbjct: 11 gaattcggcacgaggctcgag 31
>gb|CX182319.1|CX182319 D12_45-63_08.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 633
Score = 42.1 bits (21), Expect = 0.027
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcgag 21
|||||||||||||||||||||
Sbjct: 4 gaattcggcacgaggctcgag 24
>gb|CX185378.1|CX185378 C01_45-56_05.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 597
Score = 42.1 bits (21), Expect = 0.027
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcgag 21
|||||||||||||||||||||
Sbjct: 13 gaattcggcacgaggctcgag 33
>gb|CX185566.1|CX185566 D12_45-83_08.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 644
Score = 42.1 bits (21), Expect = 0.027
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcgag 21
|||||||||||||||||||||
Sbjct: 13 gaattcggcacgaggctcgag 33
>gb|DT508694.1|DT508694 WS02421.BR_K21 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02421_K21 5', mRNA sequence
Length = 817
Score = 42.1 bits (21), Expect = 0.027
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcgag 21
|||||||||||||||||||||
Sbjct: 5 gaattcggcacgaggctcgag 25
>gb|DT519171.1|DT519171 WS02440.B21_I12 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02440_I12 3', mRNA sequence
Length = 545
Score = 42.1 bits (21), Expect = 0.027
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1 gaattcggcacgaggctcgag 21
|||||||||||||||||||||
Sbjct: 541 gaattcggcacgaggctcgag 521
>gb|BU818663.1|BU818663 UA33CPA03 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 342
Score = 40.1 bits (20), Expect = 0.11
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 119 ggaatttcaaatcattgaca 138
||||||||||||||||||||
Sbjct: 262 ggaatttcaaatcattgaca 281
>gb|CV274458.1|CV274458 WS0173.B21_F11 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0173_F11 3', mRNA sequence
Length = 555
Score = 40.1 bits (20), Expect = 0.11
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 aattcggcacgaggctcgag 21
||||||||||||||||||||
Sbjct: 1 aattcggcacgaggctcgag 20
>gb|CX169697.1|CX169697 C09_69-56_05.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 642
Score = 40.1 bits (20), Expect = 0.11
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcga 20
||||||||||||||||||||
Sbjct: 13 gaattcggcacgaggctcga 32
>gb|CX173549.1|CX173549 D02_69-122_08.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 675
Score = 40.1 bits (20), Expect = 0.11
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcga 20
||||||||||||||||||||
Sbjct: 13 gaattcggcacgaggctcga 32
>gb|CX173897.1|CX173897 A12_69-58_02.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 659
Score = 40.1 bits (20), Expect = 0.11
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcga 20
||||||||||||||||||||
Sbjct: 14 gaattcggcacgaggctcga 33
>gb|CX179769.1|CX179769 A06_45-63_02.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 599
Score = 40.1 bits (20), Expect = 0.11
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcga 20
||||||||||||||||||||
Sbjct: 35 gaattcggcacgaggctcga 54
>gb|CX180105.1|CX180105 G01_45-39_13.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 639
Score = 40.1 bits (20), Expect = 0.11
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcga 20
||||||||||||||||||||
Sbjct: 19 gaattcggcacgaggctcga 38
>gb|CX182056.1|CX182056 A11_45-78_01.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 681
Score = 40.1 bits (20), Expect = 0.11
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcga 20
||||||||||||||||||||
Sbjct: 12 gaattcggcacgaggctcga 31
>gb|CX182657.1|CX182657 G10_45-94_14.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 661
Score = 40.1 bits (20), Expect = 0.11
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcga 20
||||||||||||||||||||
Sbjct: 14 gaattcggcacgaggctcga 33
>gb|CX182945.1|CX182945 E01_45-112_09.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 698
Score = 40.1 bits (20), Expect = 0.11
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcga 20
||||||||||||||||||||
Sbjct: 19 gaattcggcacgaggctcga 38
>gb|CX184263.1|CX184263 E07_45-15_09.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 604
Score = 40.1 bits (20), Expect = 0.11
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcga 20
||||||||||||||||||||
Sbjct: 9 gaattcggcacgaggctcga 28
>gb|DT492732.1|DT492732 WS02552.C21_C12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02552_C12 3', mRNA sequence
Length = 612
Score = 40.1 bits (20), Expect = 0.11
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 gaattcggcacgaggctcga 20
||||||||||||||||||||
Sbjct: 608 gaattcggcacgaggctcga 589
>gb|DT505958.1|DT505958 WS01812.C21_F04 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS01812_F04 3', mRNA sequence
Length = 846
Score = 40.1 bits (20), Expect = 0.11
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcga 20
||||||||||||||||||||
Sbjct: 731 gaattcggcacgaggctcga 750
>gb|CK095773.1|CK095773 UA26CPE05.3pR Populus dormant cambium cDNA library Populus tremula
cDNA clone UA26CPE05 3', mRNA sequence
Length = 798
Score = 38.2 bits (19), Expect = 0.42
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 489 ttcagtgtggaagggcttt 507
|||||||||||||||||||
Sbjct: 286 ttcagtgtggaagggcttt 268
>gb|CN550110.1|CN550110 GQ0242.B3_M19 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0242_M19 5', mRNA sequence
Length = 706
Score = 38.2 bits (19), Expect = 0.42
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcg 19
|||||||||||||||||||
Sbjct: 643 gaattcggcacgaggctcg 661
>gb|CV254236.1|CV254236 WS0224.B21_H19 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0224_H19 3', mRNA sequence
Length = 706
Score = 38.2 bits (19), Expect = 0.42
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1 gaattcggcacgaggctcg 19
|||||||||||||||||||
Sbjct: 461 gaattcggcacgaggctcg 443
>gb|CX167807.1|CX167807 B12_69-40_04.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 411
Score = 38.2 bits (19), Expect = 0.42
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcgagac 23
|||||||||||||||||| ||||
Sbjct: 11 gaattcggcacgaggctcaagac 33
>gb|CX167903.1|CX167903 F02_69-1_12.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 658
Score = 38.2 bits (19), Expect = 0.42
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcg 19
|||||||||||||||||||
Sbjct: 10 gaattcggcacgaggctcg 28
>gb|CX168163.1|CX168163 B04_69-64_04.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 667
Score = 38.2 bits (19), Expect = 0.42
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcg 19
|||||||||||||||||||
Sbjct: 11 gaattcggcacgaggctcg 29
>gb|CX168521.1|CX168521 D08_69-111_08.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 642
Score = 38.2 bits (19), Expect = 0.42
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcg 19
|||||||||||||||||||
Sbjct: 14 gaattcggcacgaggctcg 32
>gb|CX169321.1|CX169321 D10_69-38_08.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 647
Score = 38.2 bits (19), Expect = 0.42
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcg 19
|||||||||||||||||||
Sbjct: 14 gaattcggcacgaggctcg 32
>gb|CX170088.1|CX170088 D03_69-45_07.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 714
Score = 38.2 bits (19), Expect = 0.42
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcg 19
|||||||||||||||||||
Sbjct: 38 gaattcggcacgaggctcg 56
>gb|CX171369.1|CX171369 A09_69-19_01.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 649
Score = 38.2 bits (19), Expect = 0.42
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcg 19
|||||||||||||||||||
Sbjct: 2 gaattcggcacgaggctcg 20
>gb|CX171607.1|CX171607 G07_69-79_13.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 618
Score = 38.2 bits (19), Expect = 0.42
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcg 19
|||||||||||||||||||
Sbjct: 19 gaattcggcacgaggctcg 37
>gb|CX171988.1|CX171988 H05_69-16_15.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 603
Score = 38.2 bits (19), Expect = 0.42
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcg 19
|||||||||||||||||||
Sbjct: 10 gaattcggcacgaggctcg 28
>gb|CX172118.1|CX172118 F10_69-28_12.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 667
Score = 38.2 bits (19), Expect = 0.42
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 attcggcacgaggctcgag 21
|||||||||||||||||||
Sbjct: 487 attcggcacgaggctcgag 505
>gb|CX172609.1|CX172609 H03_69-29_15.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 588
Score = 38.2 bits (19), Expect = 0.42
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1 gaattcggcacgaggctcg 19
|||||||||||||||||||
Sbjct: 24 gaattcggcacgaggctcg 6
>gb|CX172925.1|CX172925 C03_69-51_05.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 686
Score = 38.2 bits (19), Expect = 0.42
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcg 19
|||||||||||||||||||
Sbjct: 19 gaattcggcacgaggctcg 37
>gb|CX174651.1|CX174651 D04_69-38_08.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 654
Score = 38.2 bits (19), Expect = 0.42
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 3 attcggcacgaggctcgag 21
|||||||||||||||||||
Sbjct: 20 attcggcacgaggctcgag 38
>gb|CX174968.1|CX174968 G11_69-37_13.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 711
Score = 38.2 bits (19), Expect = 0.42
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcg 19
|||||||||||||||||||
Sbjct: 14 gaattcggcacgaggctcg 32
>gb|CX175531.1|CX175531 E02_69-28_10.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 721
Score = 38.2 bits (19), Expect = 0.42
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcg 19
|||||||||||||||||||
Sbjct: 14 gaattcggcacgaggctcg 32
>gb|CX177360.1|CX177360 H04_45-74_16.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 594
Score = 38.2 bits (19), Expect = 0.42
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcg 19
|||||||||||||||||||
Sbjct: 14 gaattcggcacgaggctcg 32
>gb|CX177995.1|CX177995 F11_45-106_11.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 635
Score = 38.2 bits (19), Expect = 0.42
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 gaattcggcacgaggctcg 19
|||||||||||||||||||
Sbjct: 12 gaattcggcacgaggctcg 30
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 103,004
Number of Sequences: 369679
Number of extensions: 103004
Number of successful extensions: 39162
Number of sequences better than 0.5: 74
Number of HSP's better than 0.5 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39051
Number of HSP's gapped (non-prelim): 111
length of query: 675
length of database: 203,408,664
effective HSP length: 19
effective length of query: 656
effective length of database: 196,384,763
effective search space: 128828404528
effective search space used: 128828404528
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)