BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2949674.2.1
(658 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU862471.1|BU862471 S016B06 Populus imbibed seed cDNA li... 68 5e-010
gb|BI127868.1|BI127868 G067P14Y Populus cambium cDNA librar... 60 1e-007
gb|BI131638.1|BI131638 G123P59Y Populus cambium cDNA librar... 60 1e-007
gb|BU816359.1|BU816359 N063G02 Populus bark cDNA library Po... 60 1e-007
gb|BU862167.1|BU862167 S012C08 Populus imbibed seed cDNA li... 60 1e-007
gb|BU864188.1|BU864188 S037D08 Populus imbibed seed cDNA li... 60 1e-007
gb|BU882170.1|BU882170 UM73TE09 Populus flower cDNA library... 60 1e-007
gb|CF227511.1|CF227511 PtaD6H11H1115 Poplar cDNA library fr... 60 1e-007
gb|CF228450.1|CF228450 PtaXM0013B5B0503 Poplar cDNA library... 60 1e-007
gb|CF230713.1|CF230713 PtaC0012B10B1004 Poplar cDNA library... 60 1e-007
gb|CF231000.1|CF231000 PtaC0016B2B0204 Poplar cDNA library ... 60 1e-007
gb|CF231220.1|CF231220 PtaC0018G5G0513 Poplar cDNA library ... 60 1e-007
gb|CF232688.1|CF232688 PtaJXO0014E8E0810 Poplar cDNA librar... 60 1e-007
gb|CF233084.1|CF233084 PtaJXO0019B5B0503 Poplar cDNA librar... 60 1e-007
gb|CF235268.1|CF235268 PtaJXT0020G4G0414 Poplar cDNA librar... 60 1e-007
gb|CF237238.1|CF237238 Ptajxtjxt3F2F0212 Poplar cDNA librar... 60 1e-007
gb|CF237254.1|CF237254 Ptajxtjxt3G7G0713 Poplar cDNA librar... 60 1e-007
gb|CK089260.1|CK089260 B006P75.3pR Hybrid aspen plasmid lib... 60 1e-007
gb|CK100053.1|CK100053 B006P75.5pR Hybrid aspen plasmid lib... 60 1e-007
gb|AJ774893.1|AJ774893 AJ774893 Populus euphratica shoot 3-... 60 1e-007
gb|AJ777265.1|AJ777265 AJ777265 Populus euphratica root 3-6... 60 1e-007
gb|CV242272.1|CV242272 WS02514.B21.1_J20 PT-MB-N-A-15 Popul... 60 1e-007
gb|CV243215.1|CV243215 WS02518.B21_D18 PT-MB-N-A-15 Populus... 60 1e-007
gb|CX174032.1|CX174032 H07_69-104_15.ab1 leaf inoculated wi... 60 1e-007
gb|DN501215.1|DN501215 UM73TE09.5pR Populus female catkins ... 60 1e-007
gb|AY660751.1| Populus tomentosa Gip1-like protein mRNA, co... 60 1e-007
gb|AY660752.1| Populus tomentosa Gip1-like protein gene, co... 60 1e-007
gb|AI165727.1|AI165727 A089p64u Hybrid aspen plasmid librar... 52 3e-005
gb|AI166244.1|AI166244 a063p69u Hybrid aspen plasmid librar... 52 3e-005
gb|AI166738.1|AI166738 xylem.est.540 Poplar xylem Lambda ZA... 52 3e-005
gb|BU816807.1|BU816807 N071E11 Populus bark cDNA library Po... 52 3e-005
gb|BU878167.1|BU878167 V043H07 Populus flower cDNA library ... 52 3e-005
gb|BU890522.1|BU890522 P038B03 Populus petioles cDNA librar... 52 3e-005
gb|BU891788.1|BU891788 P055C01 Populus petioles cDNA librar... 52 3e-005
gb|CB239714.1|CB239714 RSH15F11 two-month-old roots from cl... 52 3e-005
gb|CF232375.1|CF232375 PtaJXO0009G10G1014 Poplar cDNA libra... 52 3e-005
gb|CF233642.1|CF233642 PtaJXO0026A11A1101 Poplar cDNA libra... 52 3e-005
gb|CF233648.1|CF233648 PtaJXO0026A6A0602 Poplar cDNA librar... 52 3e-005
gb|CF233705.1|CF233705 PtaJXO0026F9F0911 Poplar cDNA librar... 52 3e-005
gb|CK113797.1|CK113797 UR112TE03 Populus root cDNA library ... 52 3e-005
gb|CN549890.1|CN549890 GQ0244.B3_M13 GQ024 Populus trichoca... 52 3e-005
gb|CN550436.1|CN550436 GQ0241.B3_G08 GQ024 Populus trichoca... 52 3e-005
gb|CN550514.1|CN550514 GQ0244.B3_L15 GQ024 Populus trichoca... 52 3e-005
gb|CN550536.1|CN550536 GQ0241.B3_I03 GQ024 Populus trichoca... 52 3e-005
gb|CK318023.1|CK318023 B9P04e12 Populus stem seasonal libra... 52 3e-005
gb|CV130460.1|CV130460 B9P05b06 Populus stem seasonal libra... 52 3e-005
gb|CV227942.1|CV227942 WS0168.B21_K12 PT-DX-A-7 Populus tri... 52 3e-005
gb|CV227949.1|CV227949 WS0168.B21_K19 PT-DX-A-7 Populus tri... 52 3e-005
gb|CV236204.1|CV236204 WS01223.B21_D24 PT-GT-FL-A-3 Populus... 52 3e-005
gb|CV238524.1|CV238524 WS0127.B21.1_A03 PT-GT-FL-A-3 Populu... 52 3e-005
gb|CV241847.1|CV241847 WS02513.B21_G15 PT-MB-N-A-15 Populus... 52 3e-005
gb|CV243513.1|CV243513 WS0252.B21_B08 PT-MB-N-A-15 Populus ... 52 3e-005
gb|CV243731.1|CV243731 WS0252.B21_L04 PT-MB-N-A-15 Populus ... 52 3e-005
gb|CV246061.1|CV246061 WS0111.B21_C11 PT-P-FL-A-2 Populus t... 52 3e-005
gb|CV246087.1|CV246087 WS0111.B21_E06 PT-P-FL-A-2 Populus t... 52 3e-005
gb|CV246101.1|CV246101 WS0111.B21_E24 PT-P-FL-A-2 Populus t... 52 3e-005
gb|CV246725.1|CV246725 WS01111.B21_L14 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV247001.1|CV247001 WS01116.B21_L05 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV247388.1|CV247388 WS01117.B21_P24 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV247511.1|CV247511 WS01118.B21_G17 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV247706.1|CV247706 WS01119.B21_B02 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV247744.1|CV247744 WS01119.B21_D02 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV247784.1|CV247784 WS01119.B21_F04 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV247889.1|CV247889 WS01119.B21_L03 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV248060.1|CV248060 WS0112.B21_E15 PT-P-FL-A-2 Populus t... 52 3e-005
gb|CV248169.1|CV248169 WS0112.B21_K17 PT-P-FL-A-2 Populus t... 52 3e-005
gb|CV248442.1|CV248442 WS01120.B21_M09 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV248605.1|CV248605 WS01121.B21_F09 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV248651.1|CV248651 WS01121.B21_H18 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV248656.1|CV248656 WS01121.B21_H23 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV248706.1|CV248706 WS01121.B21_K14 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV248853.1|CV248853 WS01122.B21_C21 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV249004.1|CV249004 WS01122.B21_L11 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV249265.1|CV249265 WS01123.B21_J03 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV249293.1|CV249293 WS01123.B21_K13 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV249449.1|CV249449 WS01124.B21_D03 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV249490.1|CV249490 WS01124.B21_F10 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV249504.1|CV249504 WS01124.B21_G04 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV249540.1|CV249540 WS01124.B21_I03 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV249577.1|CV249577 WS01124.B21_K05 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV249710.1|CV249710 WS01125.B21_B01 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV249964.1|CV249964 WS01125.B21_O10 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV250137.1|CV250137 WS01126.B21_I05 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV250159.1|CV250159 WS01126.B21_J14 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV250166.1|CV250166 WS01126.B21_J24 PT-P-FL-A-2 Populus ... 52 3e-005
gb|CV250544.1|CV250544 WS0113.B21_O16 PT-P-FL-A-2 Populus t... 52 3e-005
gb|CV250605.1|CV250605 WS0114.B21_C06 PT-P-FL-A-2 Populus t... 52 3e-005
gb|CV250817.1|CV250817 WS0114.B21_N22 PT-P-FL-A-2 Populus t... 52 3e-005
gb|CV250827.1|CV250827 WS0114.B21_O13 PT-P-FL-A-2 Populus t... 52 3e-005
gb|CV250975.1|CV250975 WS0115.B21_H03 PT-P-FL-A-2 Populus t... 52 3e-005
gb|CV251128.1|CV251128 WS0115.B21_O21 PT-P-FL-A-2 Populus t... 52 3e-005
gb|CV251239.1|CV251239 WS0116.B21_F03 PT-P-FL-A-2 Populus t... 52 3e-005
gb|CV251467.1|CV251467 WS0117.B21_B22 PT-P-FL-A-2 Populus t... 52 3e-005
gb|CV251470.1|CV251470 WS0117.B21_C02 PT-P-FL-A-2 Populus t... 52 3e-005
gb|CV251933.1|CV251933 WS0118.B21_L14 PT-P-FL-A-2 Populus t... 52 3e-005
gb|CV252156.1|CV252156 WS0119.B21_K08 PT-P-FL-A-2 Populus t... 52 3e-005
gb|CV252864.1|CV252864 PX0019.B21.1_E08 PT-X-FL-A-1 Populus... 52 3e-005
gb|CV254653.1|CV254653 WS0241.B21_N01 PTxD-ICC-N-A-14 Popul... 52 3e-005
gb|CV261641.1|CV261641 WS02017.B21_F15 PTxN-IB-N-A-11 Popul... 52 3e-005
gb|CV266279.1|CV266279 WS02029.B21_J09 PTxN-IB-N-A-11 Popul... 52 3e-005
gb|CV268177.1|CV268177 WS0204.B21_M06 PTxN-IB-N-A-11 Populu... 52 3e-005
gb|CV272945.1|CV272945 WS0171.B21_D05 PTxD-NR-A-8 Populus t... 52 3e-005
gb|CV273094.1|CV273094 WS0171.B21_K07 PTxD-NR-A-8 Populus t... 52 3e-005
gb|CV276061.1|CV276061 WS0178.B21.1_I02 PTxD-NR-A-8 Populus... 52 3e-005
gb|DN491205.1|DN491205 UM73TE09.3pR Populus female catkins ... 52 3e-005
gb|DN495689.1|DN495689 N071E11.5pR Populus bark cDNA librar... 52 3e-005
gb|DT473205.1|DT473205 WS01228.BR_O15 PT-GT-FL-A-3 Populus ... 52 3e-005
gb|DT473931.1|DT473931 WS01230.BR_D06 PT-GT-FL-A-3 Populus ... 52 3e-005
gb|DT475397.1|DT475397 WS0127.BR_A03 PT-GT-FL-A-3 Populus t... 52 3e-005
gb|DT476261.1|DT476261 WS01228.B21_O15 PT-GT-FL-A-3 Populus... 52 3e-005
gb|DT476611.1|DT476611 WS01230.B21_D06 PT-GT-FL-A-3 Populus... 52 3e-005
gb|DT484686.1|DT484686 WS02526.B21_C01 PT-MB-N-A-15 Populus... 52 3e-005
gb|DT493364.1|DT493364 WS0111.BR_C11 PT-P-FL-A-2 Populus tr... 52 3e-005
gb|DT493402.1|DT493402 WS0111.BR_E06 PT-P-FL-A-2 Populus tr... 52 3e-005
gb|DT493417.1|DT493417 WS0111.BR_E24 PT-P-FL-A-2 Populus tr... 52 3e-005
gb|DT493865.1|DT493865 WS01116.BR_L05 PT-P-FL-A-2 Populus t... 52 3e-005
gb|DT493889.1|DT493889 WS01116.BR_M10 PT-P-FL-A-2 Populus t... 52 3e-005
gb|DT494434.1|DT494434 WS01118.BR.1_G17 PT-P-FL-A-2 Populus... 52 3e-005
gb|DT494655.1|DT494655 WS01119.BR_B02 PT-P-FL-A-2 Populus t... 52 3e-005
gb|DT494698.1|DT494698 WS01119.BR_D02 PT-P-FL-A-2 Populus t... 52 3e-005
gb|DT494746.1|DT494746 WS01119.BR_F04 PT-P-FL-A-2 Populus t... 52 3e-005
gb|DT494875.1|DT494875 WS01119.BR_L03 PT-P-FL-A-2 Populus t... 52 3e-005
gb|DT495068.1|DT495068 WS0112.BR_E15 PT-P-FL-A-2 Populus tr... 52 3e-005
gb|DT495193.1|DT495193 WS0112.BR_K17 PT-P-FL-A-2 Populus tr... 52 3e-005
gb|DT495538.1|DT495538 WS01120.BR_M09 PT-P-FL-A-2 Populus t... 52 3e-005
gb|DT495734.1|DT495734 WS01121.BR_F09 PT-P-FL-A-2 Populus t... 52 3e-005
gb|DT495787.1|DT495787 WS01121.BR_H18 PT-P-FL-A-2 Populus t... 52 3e-005
gb|DT495791.1|DT495791 WS01121.BR_H23 PT-P-FL-A-2 Populus t... 52 3e-005
gb|DT495848.1|DT495848 WS01121.BR_K14 PT-P-FL-A-2 Populus t... 52 3e-005
gb|DT495975.1|DT495975 WS01122.BR_A18 PT-P-FL-A-2 Populus t... 52 3e-005
gb|DT496021.1|DT496021 WS01122.BR_C21 PT-P-FL-A-2 Populus t... 52 3e-005
gb|DT496198.1|DT496198 WS01122.BR_L11 PT-P-FL-A-2 Populus t... 52 3e-005
gb|DT496491.1|DT496491 WS01123.BR_J03 PT-P-FL-A-2 Populus t... 52 3e-005
gb|DT496524.1|DT496524 WS01123.BR_K13 PT-P-FL-A-2 Populus t... 52 3e-005
gb|DT496827.1|DT496827 WS01124.BR_K05 PT-P-FL-A-2 Populus t... 52 3e-005
gb|DT496958.1|DT496958 WS01125.BR_B01 PT-P-FL-A-2 Populus t... 52 3e-005
gb|DT496993.1|DT496993 WS01125.BR_C18 PT-P-FL-A-2 Populus t... 52 3e-005
gb|DT497239.1|DT497239 WS01125.BR_O10 PT-P-FL-A-2 Populus t... 52 3e-005
gb|DT497434.1|DT497434 WS01126.BR_H09 PT-P-FL-A-2 Populus t... 52 3e-005
gb|DT497449.1|DT497449 WS01126.BR_I05 PT-P-FL-A-2 Populus t... 52 3e-005
gb|DT497478.1|DT497478 WS01126.BR_J14 PT-P-FL-A-2 Populus t... 52 3e-005
gb|DT497487.1|DT497487 WS01126.BR_J24 PT-P-FL-A-2 Populus t... 52 3e-005
gb|DT497940.1|DT497940 WS0113.BR_O16 PT-P-FL-A-2 Populus tr... 52 3e-005
gb|DT498015.1|DT498015 WS0114.BR_C06 PT-P-FL-A-2 Populus tr... 52 3e-005
gb|DT498269.1|DT498269 WS0114.BR_N22 PT-P-FL-A-2 Populus tr... 52 3e-005
gb|DT498278.1|DT498278 WS0114.BR_O08 PT-P-FL-A-2 Populus tr... 52 3e-005
gb|DT498283.1|DT498283 WS0114.BR_O13 PT-P-FL-A-2 Populus tr... 52 3e-005
gb|DT498466.1|DT498466 WS0115.BR_H03 PT-P-FL-A-2 Populus tr... 52 3e-005
gb|DT498638.1|DT498638 WS0115.BR_O21 PT-P-FL-A-2 Populus tr... 52 3e-005
gb|DT498774.1|DT498774 WS0116.BR_F03 PT-P-FL-A-2 Populus tr... 52 3e-005
gb|DT499051.1|DT499051 WS0117.BR_B22 PT-P-FL-A-2 Populus tr... 52 3e-005
gb|DT499054.1|DT499054 WS0117.BR_C02 PT-P-FL-A-2 Populus tr... 52 3e-005
gb|DT499245.1|DT499245 WS0117.BR_L16 PT-P-FL-A-2 Populus tr... 52 3e-005
gb|DT499585.1|DT499585 WS0118.BR_L14 PT-P-FL-A-2 Populus tr... 52 3e-005
gb|DT500799.1|DT500799 PX0019.BR_E08 PT-X-FL-A-1 Populus tr... 52 3e-005
gb|DT516105.1|DT516105 WS02430.B21_G17 PTxD-ICC-N-A-14 Popu... 52 3e-005
gb|DT517171.1|DT517171 WS02433.B21_I09 PTxD-ICC-N-A-14 Popu... 52 3e-005
gb|BI071965.1|BI071965 C066P77U Populus strain T89 leaves P... 50 1e-004
gb|CF236632.1|CF236632 PtaJXT5B8B0804 Poplar cDNA library f... 50 1e-004
gb|CX655186.1|CX655186 PO02031B09 Poplar SC cDNA library Po... 50 1e-004
gb|CX655237.1|CX655237 PO02031H04 Poplar SC cDNA library Po... 50 1e-004
gb|CX657692.1|CX657692 PO02025F08 Poplar SC cDNA library Po... 50 1e-004
gb|CX658366.1|CX658366 PO01034C08 Poplar SC cDNA library Po... 50 1e-004
gb|CX658401.1|CX658401 PO01034F08 Poplar SC cDNA library Po... 50 1e-004
gb|CX660371.1|CX660371 PO01029D02 Poplar SC cDNA library Po... 50 1e-004
gb|DN498639.1|DN498639 S055G04.5pR Populus imbibed seed cDN... 50 1e-004
gb|BU828557.1|BU828557 K025P08P Populus apical shoot cDNA l... 46 0.002
gb|AI163956.1|AI163956 A052P39U Hybrid aspen plasmid librar... 44 0.007
gb|CB240264.1|CB240264 PopSC00242 Poplar SC cDNA library Po... 44 0.007
gb|CV249746.1|CV249746 WS01125.B21_C18 PT-P-FL-A-2 Populus ... 44 0.007
gb|CX654649.1|CX654649 PO01002A10 Poplar SC cDNA library Po... 44 0.007
gb|AI165454.1|AI165454 A084P28U Hybrid aspen plasmid librar... 42 0.026
gb|CN517598.1|CN517598 GQ0091.B3_E15 GQ009 Populus trichoca... 42 0.026
gb|CV253355.1|CV253355 WS0221.B21_K16 PTxD-ICC-A-12 Populus... 42 0.026
gb|CV253666.1|CV253666 WS0222.B21_K04 PTxD-ICC-A-12 Populus... 42 0.026
gb|CV254100.1|CV254100 WS0224.B21_A07 PTxD-ICC-A-12 Populus... 42 0.026
gb|DT518306.1|DT518306 WS02436.B21_M11 PTxD-ICC-N-A-14 Popu... 42 0.026
gb|DT520915.1|DT520915 WS02448.B21_O11 PTxD-ICC-N-A-14 Popu... 42 0.026
gb|AI165899.1|AI165899 B004P03U Hybrid aspen plasmid librar... 40 0.10
gb|CN522622.1|CN522622 GQ0123.B3_A09 GQ012 Populus trichoca... 40 0.10
gb|CV239737.1|CV239737 WS0233.B21_F04 PT-MB-A-13 Populus tr... 40 0.10
gb|CV240600.1|CV240600 WS0251.B21_N09 PT-MB-N-A-15 Populus ... 40 0.10
gb|CV243302.1|CV243302 WS02518.B21_H20 PT-MB-N-A-15 Populus... 40 0.10
gb|CV257755.1|CV257755 WS0247.B21_J02 PTxD-ICC-N-A-14 Popul... 40 0.10
gb|DT488870.1|DT488870 WS02537.B21_K18 PT-MB-N-A-15 Populus... 40 0.10
gb|DT491042.1|DT491042 WS02546.C21.1_K10 PT-MB-N-A-15 Popul... 40 0.10
gb|DT491466.1|DT491466 WS02547.C21_N01 PT-MB-N-A-15 Populus... 40 0.10
gb|DT507248.1|DT507248 WS02417.BR_M01 PTxD-ICC-N-A-14 Popul... 40 0.10
gb|DT511887.1|DT511887 WS02417.B21_M01 PTxD-ICC-N-A-14 Popu... 40 0.10
gb|DT519888.1|DT519888 WS02443.B21_P11 PTxD-ICC-N-A-14 Popu... 40 0.10
gb|BU862117.1|BU862117 S011F10 Populus imbibed seed cDNA li... 38 0.41
gb|CA933811.1|CA933811 MTU3TS.P13.A05 Aspen stem cDNA Libra... 38 0.41
gb|DN486141.1|DN486141 N071E11.3pR Populus bark cDNA librar... 38 0.41
gb|DT504574.1|DT504574 WS01313.B21_O15 PTxD-IL-FL-A-4 Popul... 38 0.41
>gb|BU862471.1|BU862471 S016B06 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 593
Score = 67.9 bits (34), Expect = 5e-010
Identities = 124/154 (80%)
Strand = Plus / Plus
Query: 372 ggtgctcggcgacggcgtaccagaagccgtgcctcttcttctgccgcaagtgctgcgcgg 431
||||||| |||||||||||| ||||||| ||| | |||||||| | |||||||| ||
Sbjct: 254 ggtgctcagcgacggcgtacaagaagccatgcttgttcttctgtcaaaagtgctgtgcaa 313
Query: 432 cgtgcctgtgcgtgccgccgggcacctacggcaacaagaacacctgcccctgctacaaca 491
|||| |||| ||||| || || || || || ||||| | | ||||| ||||||||||
Sbjct: 314 agtgcttgtgtgtgcctcccggtacgtatgggaacaaacagtcttgcccttgctacaaca 373
Query: 492 actggaagaccaagcggggaggccccaagtgccc 525
|||||||||||||| | ||||| ||||| |||||
Sbjct: 374 actggaagaccaagagaggagggcccaaatgccc 407
>gb|BI127868.1|BI127868 G067P14Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 525
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 363 tgcccttgctacaacaactggaagaccaaggaaggagggcccaagtgccc 412
>gb|BI131638.1|BI131638 G123P59Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 469
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 146 tgcccttgctacaacaactggaagaccaaggaaggagggcccaagtgccc 195
>gb|BU816359.1|BU816359 N063G02 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 376
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 201 tgcccttgctacaacaactggaagaccaaggaaggagggcccaagtgccc 250
>gb|BU862167.1|BU862167 S012C08 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 592
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 377 tgcccttgctacaacaactggaagaccaaggaaggagggcccaagtgccc 426
>gb|BU864188.1|BU864188 S037D08 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 530
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 376 tgcccttgctacaacaactggaagaccaaggaaggagggcccaagtgccc 425
>gb|BU882170.1|BU882170 UM73TE09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 553
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| | ||||| ||||| |||||
Sbjct: 356 tgcccttgctacaacaactggaagaccaagagaggagggcccaaatgccc 405
>gb|CF227511.1|CF227511 PtaD6H11H1115 Poplar cDNA library from wood tissues Populus alba x
Populus tremula cDNA 5', mRNA sequence
Length = 682
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 384 tgcccttgctacaacaactggaagaccaaggaaggagggcccaagtgccc 433
>gb|CF228450.1|CF228450 PtaXM0013B5B0503 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 679
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 380 tgcccttgctacaacaactggaagaccaaggaaggagggcccaagtgccc 429
>gb|CF230713.1|CF230713 PtaC0012B10B1004 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 673
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 382 tgcccttgctacaacaactggaagaccaaggaaggagggcccaagtgccc 431
>gb|CF231000.1|CF231000 PtaC0016B2B0204 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 483
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 171 tgcccttgctacaacaactggaagaccaaggaaggagggcccaagtgccc 220
>gb|CF231220.1|CF231220 PtaC0018G5G0513 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 666
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 377 tgcccttgctacaacaactggaagaccaaggaaggagggcccaagtgccc 426
>gb|CF232688.1|CF232688 PtaJXO0014E8E0810 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 696
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 377 tgcccttgctacaacaactggaagaccaaggaaggagggcccaagtgccc 426
>gb|CF233084.1|CF233084 PtaJXO0019B5B0503 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 719
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 376 tgcccttgctacaacaactggaagaccaaggaaggagggcccaagtgccc 425
>gb|CF235268.1|CF235268 PtaJXT0020G4G0414 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 669
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 377 tgcccttgctacaacaactggaagaccaaggaaggagggcccaagtgccc 426
>gb|CF237238.1|CF237238 Ptajxtjxt3F2F0212 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 650
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 376 tgcccttgctacaacaactggaagaccaaggaaggagggcccaagtgccc 425
>gb|CF237254.1|CF237254 Ptajxtjxt3G7G0713 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 762
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 379 tgcccttgctacaacaactggaagaccaaggaaggagggcccaagtgccc 428
>gb|CK089260.1|CK089260 B006P75.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B006P75 3', mRNA sequence
Length = 679
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 315 tgcccttgctacaacaactggaagaccaaggaaggagggcccaagtgccc 266
>gb|CK100053.1|CK100053 B006P75.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B006P75 5', mRNA sequence
Length = 657
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 373 tgcccttgctacaacaactggaagaccaaggaaggagggcccaagtgccc 422
>gb|AJ774893.1|AJ774893 AJ774893 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300025E03F1, mRNA sequence
Length = 523
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 301 tgcccttgctacaacaactggaagaccaaggaaggagggcccaagtgccc 350
>gb|AJ777265.1|AJ777265 AJ777265 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400025E03F1, mRNA sequence
Length = 647
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 364 tgcccttgctacaacaactggaagaccaaggaaggagggcccaagtgccc 413
>gb|CV242272.1|CV242272 WS02514.B21.1_J20 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02514_J20 3', mRNA sequence
Length = 383
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| | ||||| ||||| |||||
Sbjct: 276 tgcccttgctacaacaactggaagaccaagagaggagggcccaaatgccc 227
>gb|CV243215.1|CV243215 WS02518.B21_D18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02518_D18 3', mRNA sequence
Length = 615
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| | ||||| ||||| |||||
Sbjct: 282 tgcccttgctacaacaactggaagaccaagagaggagggcccaaatgccc 233
>gb|CX174032.1|CX174032 H07_69-104_15.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 590
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| | ||||| ||||| |||||
Sbjct: 336 tgcccttgctacaacaactggaagaccaagagaggagggcccaaatgccc 385
>gb|DN501215.1|DN501215 UM73TE09.5pR Populus female catkins cDNA library Populus
trichocarpa cDNA clone UM73TE09 5', mRNA sequence
Length = 592
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| | ||||| ||||| |||||
Sbjct: 365 tgcccttgctacaacaactggaagaccaagagaggagggcccaaatgccc 414
>gb|AY660751.1| Populus tomentosa Gip1-like protein mRNA, complete cds
Length = 491
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 364 tgcccttgctacaacaactggaagaccaaggaaggagggcccaagtgccc 413
>gb|AY660752.1| Populus tomentosa Gip1-like protein gene, complete cds
Length = 1082
Score = 60.0 bits (30), Expect = 1e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 955 tgcccttgctacaacaactggaagaccaaggaaggagggcccaagtgccc 1004
>gb|AI165727.1|AI165727 A089p64u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 383
Score = 52.0 bits (26), Expect = 3e-005
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaag 505
||||| ||||||||||||||||||||||||
Sbjct: 302 tgcccttgctacaacaactggaagaccaag 331
>gb|AI166244.1|AI166244 a063p69u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 395
Score = 52.0 bits (26), Expect = 3e-005
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgcc 524
||||| ||| |||||||||||||||||||| ||||| ||||||||||
Sbjct: 317 tgcccttgcnacaacaactggaagaccaaggaaggagggcccaagtgcc 365
>gb|AI166738.1|AI166738 xylem.est.540 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 570
Score = 52.0 bits (26), Expect = 3e-005
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 476 tgcccctgctacaacaactggaagaccaag 505
||||| ||||||||||||||||||||||||
Sbjct: 281 tgcccttgctacaacaactggaagaccaag 252
>gb|BU816807.1|BU816807 N071E11 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 448
Score = 52.0 bits (26), Expect = 3e-005
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 452 ggcacctacggcaacaagaacacctgcccctgctacaacaactggaagaccaag 505
||||| || ||||||||| | || ||||| |||||||| |||||||||||||||
Sbjct: 155 ggcacttatggcaacaaggaaacatgcccttgctacaataactggaagaccaag 208
>gb|BU878167.1|BU878167 V043H07 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 542
Score = 52.0 bits (26), Expect = 3e-005
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaag 505
||||| ||||||||||||||||||||||||
Sbjct: 347 tgcccttgctacaacaactggaagaccaag 376
>gb|BU890522.1|BU890522 P038B03 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 441
Score = 52.0 bits (26), Expect = 3e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||| ||| ||||| |||||||||||
Sbjct: 377 tgcccttgctacaacaactggaagactaaggaaggagggcccaagtgccc 426
>gb|BU891788.1|BU891788 P055C01 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 322
Score = 52.0 bits (26), Expect = 3e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||| ||| ||||| |||||||||||
Sbjct: 28 tgcccttgctacaacaactggaagactaaggaaggagggcccaagtgccc 77
>gb|CB239714.1|CB239714 RSH15F11 two-month-old roots from clone 'Beaupre' grown for 19 days
under restricted irrigation Populus trichocarpa x
Populus deltoides cDNA 5', mRNA sequence
Length = 581
Score = 52.0 bits (26), Expect = 3e-005
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaag 505
||||| ||||||||||||||||||||||||
Sbjct: 392 tgcccttgctacaacaactggaagaccaag 421
>gb|CF232375.1|CF232375 PtaJXO0009G10G1014 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 700
Score = 52.0 bits (26), Expect = 3e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||| ||| ||||| |||||||||||
Sbjct: 378 tgcccttgctacaacaactggaagactaaggaaggagggcccaagtgccc 427
>gb|CF233642.1|CF233642 PtaJXO0026A11A1101 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 427
Score = 52.0 bits (26), Expect = 3e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||| ||| ||||| |||||||||||
Sbjct: 133 tgcccttgctacaacaactggaagactaaggaaggagggcccaagtgccc 182
>gb|CF233648.1|CF233648 PtaJXO0026A6A0602 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 679
Score = 52.0 bits (26), Expect = 3e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||| ||| ||||| |||||||||||
Sbjct: 377 tgcccttgctacaacaactggaagactaaggaaggagggcccaagtgccc 426
>gb|CF233705.1|CF233705 PtaJXO0026F9F0911 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 614
Score = 52.0 bits (26), Expect = 3e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||| ||| ||||| |||||||||||
Sbjct: 376 tgcccttgctacaacaactggaagactaaggaaggagggcccaagtgccc 425
>gb|CK113797.1|CK113797 UR112TE03 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone UR112TE03 5', mRNA sequence
Length = 627
Score = 52.0 bits (26), Expect = 3e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaagcggggaggccccaagtgccc 525
||||| |||||||||||||||||||| ||| ||||| |||||||||||
Sbjct: 379 tgcccttgctacaacaactggaagactaaggaaggagggcccaagtgccc 428
>gb|CN549890.1|CN549890 GQ0244.B3_M13 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0244_M13 5', mRNA sequence
Length = 639
Score = 52.0 bits (26), Expect = 3e-005
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaag 505
||||| ||||||||||||||||||||||||
Sbjct: 358 tgcccttgctacaacaactggaagaccaag 387
>gb|CN550436.1|CN550436 GQ0241.B3_G08 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0241_G08 5', mRNA sequence
Length = 613
Score = 52.0 bits (26), Expect = 3e-005
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaag 505
||||| ||||||||||||||||||||||||
Sbjct: 343 tgcccttgctacaacaactggaagaccaag 372
>gb|CN550514.1|CN550514 GQ0244.B3_L15 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0244_L15 5', mRNA sequence
Length = 634
Score = 52.0 bits (26), Expect = 3e-005
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaag 505
||||| ||||||||||||||||||||||||
Sbjct: 353 tgcccttgctacaacaactggaagaccaag 382
>gb|CN550536.1|CN550536 GQ0241.B3_I03 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0241_I03 5', mRNA sequence
Length = 645
Score = 52.0 bits (26), Expect = 3e-005
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaag 505
||||| ||||||||||||||||||||||||
Sbjct: 364 tgcccttgctacaacaactggaagaccaag 393
>gb|CK318023.1|CK318023 B9P04e12 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 454
Score = 52.0 bits (26), Expect = 3e-005
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaag 505
||||| ||||||||||||||||||||||||
Sbjct: 157 tgcccttgctacaacaactggaagaccaag 186
>gb|CV130460.1|CV130460 B9P05b06 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 532
Score = 52.0 bits (26), Expect = 3e-005
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 476 tgcccctgctacaacaactggaagaccaag 505
||||| ||||||||||||||||||||||||
Sbjct: 242 tgcccttgctacaacaactggaagaccaag 271
>gb|CV227942.1|CV227942 WS0168.B21_K12 PT-DX-A-7 Populus trichocarpa cDNA clone WS0168_K12
3', mRNA sequence
Length = 440
Score = 52.0 bits (26), Expect = 3e-005
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 476 tgcccctgctacaacaactggaagaccaag 505
||||| ||||||||||||||||||||||||
Sbjct: 302 tgcccttgctacaacaactggaagaccaag 273
>gb|CV227949.1|CV227949 WS0168.B21_K19 PT-DX-A-7 Populus trichocarpa cDNA clone WS0168_K19
3', mRNA sequence
Length = 670
Score = 52.0 bits (26), Expect = 3e-005
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 476 tgcccctgctacaacaactggaagaccaag 505
||||| ||||||||||||||||||||||||
Sbjct: 301 tgcccttgctacaacaactggaagaccaag 272
>gb|CV236204.1|CV236204 WS01223.B21_D24 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01223_D24 3', mRNA sequence
Length = 702
Score = 52.0 bits (26), Expect = 3e-005
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 476 tgcccctgctacaacaactggaagaccaag 505
||||| ||||||||||||||||||||||||
Sbjct: 293 tgcccttgctacaacaactggaagaccaag 264
>gb|CV238524.1|CV238524 WS0127.B21.1_A03 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0127_A03 3', mRNA sequence
Length = 645
Score = 52.0 bits (26), Expect = 3e-005
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 476 tgcccctgctacaacaactggaagaccaag 505
||||| ||||||||||||||||||||||||
Sbjct: 309 tgcccttgctacaacaactggaagaccaag 280
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 67,774
Number of Sequences: 369679
Number of extensions: 67774
Number of successful extensions: 19494
Number of sequences better than 0.5: 194
Number of HSP's better than 0.5 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 19294
Number of HSP's gapped (non-prelim): 199
length of query: 658
length of database: 203,408,664
effective HSP length: 19
effective length of query: 639
effective length of database: 196,384,763
effective search space: 125489863557
effective search space used: 125489863557
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)