BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2542159.2.1
(1231 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA821727.1|CA821727 RSH06F08 two-month-old roots from cl... 119 3e-025
gb|BU827781.1|BU827781 K008P84P Populus apical shoot cDNA l... 100 2e-019
gb|CF227796.1|CF227796 PtaXM0004G2G0214 Poplar cDNA library... 96 4e-018
gb|CF230981.1|CF230981 PtaC0015H5H0515 Poplar cDNA library ... 96 4e-018
gb|CV261857.1|CV261857 WS02017.B21_P11 PTxN-IB-N-A-11 Popul... 96 4e-018
gb|AI166600.1|AI166600 xylem.est.416 Poplar xylem Lambda ZA... 92 6e-017
gb|DT498889.1|DT498889 WS0116.BR_K09 PT-P-FL-A-2 Populus tr... 92 6e-017
gb|CA925824.1|CA925824 MTU7TL.P6.D02 Aspen leaf cDNA Librar... 90 2e-016
gb|CA926734.1|CA926734 MTU6CR.P18.E09 Aspen root cDNA Libra... 90 2e-016
gb|CV232090.1|CV232090 WS0196.B21_I09 PT-DX-N-A-10 Populus ... 90 2e-016
gb|CV251335.1|CV251335 WS0116.B21_K09 PT-P-FL-A-2 Populus t... 90 2e-016
gb|CX659690.1|CX659690 PO01033G12 Poplar SC cDNA library Po... 90 2e-016
gb|CA821848.1|CA821848 RSH08D07 two-month-old roots from cl... 88 9e-016
gb|CA825610.1|CA825610 R62D03 two-month-old roots from clon... 88 9e-016
gb|BU875363.1|BU875363 V006A07 Populus flower cDNA library ... 86 4e-015
gb|BI127215.1|BI127215 G057P02Y Populus cambium cDNA librar... 84 1e-014
gb|CF233644.1|CF233644 PtaJXO0026A2A0202 Poplar cDNA librar... 84 1e-014
gb|CK107762.1|CK107762 G057P02 Populus tension wood cDNA li... 84 1e-014
gb|DN492590.1|DN492590 X027F04.3pR Populus wood cDNA librar... 84 1e-014
gb|DN502617.1|DN502617 X027F02.5pR Populus wood cDNA librar... 84 1e-014
gb|DN503693.1|DN503693 X018G08.3pR Populus wood cDNA librar... 84 1e-014
gb|DN503774.1|DN503774 X018G08.5pR Populus wood cDNA librar... 84 1e-014
gb|BU825782.1|BU825782 UK113TA07 Populus apical shoot cDNA ... 82 6e-014
gb|BU826918.1|BU826918 UK126TD02 Populus apical shoot cDNA ... 82 6e-014
gb|CA931968.1|CA931968 MTU4TA.P25.C03 Aspen apex cDNA Libra... 82 6e-014
gb|CV245673.1|CV245673 WS0259.B21_B05 PT-MB-N-A-15 Populus ... 82 6e-014
gb|CX656671.1|CX656671 PO02022A01 Poplar SC cDNA library Po... 82 6e-014
gb|DT470274.1|DT470274 WS01920.C21_G04 PT-DX-N-A-10 Populus... 82 6e-014
gb|BU871834.1|BU871834 Q035A12 Populus flower cDNA library ... 80 2e-013
gb|CV232524.1|CV232524 WS0197.B21_N22 PT-DX-N-A-10 Populus ... 80 2e-013
gb|CX184195.1|CX184195 A10_45-42_02.ab1 leaf inoculated wit... 80 2e-013
gb|CX658954.1|CX658954 PO01024F01 Poplar SC cDNA library Po... 80 2e-013
gb|CF233202.1|CF233202 PtaJXO0020E1E0109 Poplar cDNA librar... 78 9e-013
gb|AI164210.1|AI164210 A057P38U Hybrid aspen plasmid librar... 76 4e-012
gb|BU102295.1|BU102295 mep119 Poplar developing cambium Pop... 76 4e-012
gb|CF233198.1|CF233198 PtaJXO0020D9D0907 Poplar cDNA librar... 76 4e-012
gb|CK318683.1|CK318683 X9P02c03 Populus stem seasonal libra... 76 4e-012
gb|CX181170.1|CX181170 D11_45-56_07.ab1 leaf inoculated wit... 76 4e-012
gb|DT489899.1|DT489899 WS02543.B21_H21 PT-MB-N-A-15 Populus... 76 4e-012
gb|DT492529.1|DT492529 WS02551.C21_A09 PT-MB-N-A-15 Populus... 76 4e-012
gb|CF234133.1|CF234133 PtaJXO2H5H0515 Poplar cDNA library f... 74 1e-011
gb|AJ775121.1|AJ775121 AJ775121 Populus euphratica shoot 3-... 74 1e-011
gb|CV272415.1|CV272415 WS0157.B21_J15 PTxN-IB-A-6 Populus t... 74 1e-011
gb|CV282722.1|CV282722 WS0185.B21_G19 PTxD-IL-N-A-9 Populus... 74 1e-011
gb|DT501261.1|DT501261 WS01312.BR_B22 PTxD-IL-FL-A-4 Populu... 74 1e-011
gb|DT504127.1|DT504127 WS01312.B21_B22 PTxD-IL-FL-A-4 Popul... 74 1e-011
gb|DT516435.1|DT516435 WS02431.B21_G04 PTxD-ICC-N-A-14 Popu... 74 1e-011
gb|CV256200.1|CV256200 WS0243.B21_D08 PTxD-ICC-N-A-14 Popul... 72 6e-011
gb|CX172129.1|CX172129 E01_69-71_09.ab1 leaf inoculated wit... 72 6e-011
gb|CX173825.1|CX173825 C03_69-85_05.ab1 leaf inoculated wit... 72 6e-011
gb|CB240370.1|CB240370 PopSC00349 Poplar SC cDNA library Po... 70 2e-010
gb|CX660414.1|CX660414 PO01013B08 Poplar SC cDNA library Po... 70 2e-010
gb|CX172487.1|CX172487 F03_69-95_11.ab1 leaf inoculated wit... 68 9e-010
gb|DN488508.1|DN488508 S003D06.3pR Populus imbibed seed cDN... 68 9e-010
gb|DT510062.1|DT510062 WS02425.BR_H18 PTxD-ICC-N-A-14 Popul... 68 9e-010
gb|DT514681.1|DT514681 WS02425.B21_H18 PTxD-ICC-N-A-14 Popu... 68 9e-010
gb|CK099221.1|CK099221 A057P38.5pR Hybrid aspen plasmid lib... 66 3e-009
gb|DT478590.1|DT478590 WS02523.BR_D13 PT-MB-N-A-15 Populus ... 66 3e-009
gb|DT481584.1|DT481584 WS02532.BR_E22 PT-MB-N-A-15 Populus ... 66 3e-009
gb|DT483661.1|DT483661 WS02523.B21_D13 PT-MB-N-A-15 Populus... 66 3e-009
gb|DT486924.1|DT486924 WS02532.B21_E22 PT-MB-N-A-15 Populus... 66 3e-009
gb|DT487567.1|DT487567 WS02534.B21_A18 PT-MB-N-A-15 Populus... 66 3e-009
gb|DT490083.1|DT490083 WS02543.B21_P20 PT-MB-N-A-15 Populus... 66 3e-009
gb|BU865809.1|BU865809 S059A05 Populus imbibed seed cDNA li... 64 1e-008
gb|AJ780821.1|AJ780821 AJ780821 Populus euphratica leaf 3-6... 64 1e-008
gb|BU814877.1|BU814877 N034D10 Populus bark cDNA library Po... 58 8e-007
gb|BU821219.1|BU821219 UB20CPE12 Populus tremula cambium cD... 58 8e-007
gb|CK098101.1|CK098101 A004P43.5pR Hybrid aspen plasmid lib... 58 8e-007
gb|DN495308.1|DN495308 N034D10.5pR Populus bark cDNA librar... 58 8e-007
gb|CF230904.1|CF230904 PtaC0014F5F0511 Poplar cDNA library ... 56 3e-006
gb|CF235117.1|CF235117 PtaJXT0019B11B1103 Poplar cDNA libra... 56 3e-006
gb|DT517648.1|DT517648 WS02434.B21_O13 PTxD-ICC-N-A-14 Popu... 54 1e-005
gb|AI165692.1|AI165692 A088p08u Hybrid aspen plasmid librar... 52 5e-005
gb|BU861778.1|BU861778 S006F04 Populus imbibed seed cDNA li... 52 5e-005
gb|BU875072.1|BU875072 V002A06 Populus flower cDNA library ... 52 5e-005
gb|CA823108.1|CA823108 R21A02 two-month-old roots from clon... 52 5e-005
gb|CK096637.1|CK096637 UB21CPF01.3pR Populus active cambium... 52 5e-005
gb|CK112462.1|CK112462 S002F12 Populus imbibed seed cDNA li... 52 5e-005
gb|CV241347.1|CV241347 WS02511.B21_P02 PT-MB-N-A-15 Populus... 52 5e-005
gb|CX178680.1|CX178680 A11_45-75_01.ab1 leaf inoculated wit... 52 5e-005
gb|CX184054.1|CX184054 D03_45-36_07.ab1 leaf inoculated wit... 52 5e-005
gb|DT521797.1|DT521797 WS02035.B21_E02 PTxN-IB-N-A-11 Popul... 52 5e-005
gb|DT522779.1|DT522779 WS02037.B21_O20 PTxN-IB-N-A-11 Popul... 52 5e-005
gb|DT522952.1|DT522952 WS02038.B21_G02 PTxN-IB-N-A-11 Popul... 52 5e-005
gb|BI126257.1|BI126257 I072P71P Populus leaf cDNA library P... 50 2e-004
gb|CN523576.1|CN523576 GQ015M02.T3_G08 GQ015 Populus tricho... 50 2e-004
gb|CV234134.1|CV234134 WS01213.B21_M01 PT-GT-FL-A-3 Populus... 50 2e-004
gb|CV235604.1|CV235604 WS0122.B21_M24 PT-GT-FL-A-3 Populus ... 50 2e-004
gb|CX660108.1|CX660108 PO01018B05 Poplar SC cDNA library Po... 50 2e-004
gb|BP924869.1|BP924869 BP924869 full-length enriched poplar... 50 2e-004
gb|BP925217.1|BP925217 BP925217 full-length enriched poplar... 50 2e-004
gb|DT474183.1|DT474183 WS01231.BR_B18 PT-GT-FL-A-3 Populus ... 50 2e-004
gb|DT476858.1|DT476858 WS01231.B21_B18 PT-GT-FL-A-3 Populus... 50 2e-004
gb|AI164063.1|AI164063 A054P44U Hybrid aspen plasmid librar... 48 8e-004
gb|BU835901.1|BU835901 T080A12 Populus apical shoot cDNA li... 48 8e-004
gb|CN519368.1|CN519368 GQ0101.B3_L08 GQ010 Populus trichoca... 48 8e-004
gb|CV262995.1|CV262995 WS02020.B21_B02 PTxN-IB-N-A-11 Popul... 48 8e-004
gb|CV266505.1|CV266505 WS0203.B21_D12 PTxN-IB-N-A-11 Populu... 48 8e-004
gb|CX174898.1|CX174898 D01_69-99_07.ab1 leaf inoculated wit... 48 8e-004
gb|CX657320.1|CX657320 PO02040H09 Poplar SC cDNA library Po... 48 8e-004
gb|DN487026.1|DN487026 P083C11.3pR Populus petioles cDNA li... 48 8e-004
gb|DN496625.1|DN496625 P083C11.5pR Populus petioles cDNA li... 48 8e-004
gb|DT478126.1|DT478126 WS02521.BR_O17 PT-MB-N-A-15 Populus ... 48 8e-004
gb|DT480596.1|DT480596 WS02529.BR_F22 PT-MB-N-A-15 Populus ... 48 8e-004
gb|DT485860.1|DT485860 WS02529.B21_F22 PT-MB-N-A-15 Populus... 48 8e-004
gb|DT518156.1|DT518156 WS02436.B21_F17 PTxD-ICC-N-A-14 Popu... 48 8e-004
gb|AY497382.1| Populus balsamifera subsp. trichocarpa micro... 48 8e-004
gb|AI161828.1|AI161828 A007P50U Hybrid aspen plasmid librar... 46 0.003
gb|BI129729.1|BI129729 G094P91Y Populus cambium cDNA librar... 46 0.003
gb|BU836766.1|BU836766 T090F07 Populus apical shoot cDNA li... 46 0.003
gb|CK087416.1|CK087416 A007P50.3pR Hybrid aspen plasmid lib... 46 0.003
gb|CK098205.1|CK098205 A007P50.5pR Hybrid aspen plasmid lib... 46 0.003
gb|CV233746.1|CV233746 WS01212.B21_D12 PT-GT-FL-A-3 Populus... 46 0.003
gb|CV234233.1|CV234233 WS01214.B21_C09 PT-GT-FL-A-3 Populus... 46 0.003
gb|CV235465.1|CV235465 WS0122.B21_E04 PT-GT-FL-A-3 Populus ... 46 0.003
gb|CV235860.1|CV235860 WS01221.B21_O05 PT-GT-FL-A-3 Populus... 46 0.003
gb|CV236652.1|CV236652 WS01224.B21.1_O11 PT-GT-FL-A-3 Popul... 46 0.003
gb|CV238652.1|CV238652 WS0127.B21.1_I04 PT-GT-FL-A-3 Populu... 46 0.003
gb|CV242728.1|CV242728 WS02515.B21_N24 PT-MB-N-A-15 Populus... 46 0.003
gb|CV245635.1|CV245635 WS0257.B21_P13 PT-MB-N-A-15 Populus ... 46 0.003
gb|CV255392.1|CV255392 WS02412.B21_O04 PTxD-ICC-N-A-14 Popu... 46 0.003
gb|CV258407.1|CV258407 WS0249.B21_H07 PTxD-ICC-N-A-14 Popul... 46 0.003
gb|CV258606.1|CV258606 WS0201.B21_A05 PTxN-IB-N-A-11 Populu... 46 0.003
gb|CV261372.1|CV261372 WS02016.B21_J16 PTxN-IB-N-A-11 Popul... 46 0.003
gb|CV262420.1|CV262420 WS02019.B21_I05 PTxN-IB-N-A-11 Popul... 46 0.003
gb|CV267333.1|CV267333 WS02031.B21_H12 PTxN-IB-N-A-11 Popul... 46 0.003
gb|CV267817.1|CV267817 WS02032.B21_M11 PTxN-IB-N-A-11 Popul... 46 0.003
gb|CV269174.1|CV269174 WS0207.B21_I11 PTxN-IB-N-A-11 Populu... 46 0.003
gb|DT476643.1|DT476643 WS01230.B21_E20 PT-GT-FL-A-3 Populus... 46 0.003
gb|DT478026.1|DT478026 WS02521.BR_K09 PT-MB-N-A-15 Populus ... 46 0.003
gb|DT478699.1|DT478699 WS02523.BR_I18 PT-MB-N-A-15 Populus ... 46 0.003
gb|DT483094.1|DT483094 WS02521.B21_K09 PT-MB-N-A-15 Populus... 46 0.003
gb|DT483775.1|DT483775 WS02523.B21_I18 PT-MB-N-A-15 Populus... 46 0.003
gb|DT484768.1|DT484768 WS02526.B21_F21 PT-MB-N-A-15 Populus... 46 0.003
gb|DT487689.1|DT487689 WS02534.B21_G07 PT-MB-N-A-15 Populus... 46 0.003
gb|DT491123.1|DT491123 WS02546.C21.1_N24 PT-MB-N-A-15 Popul... 46 0.003
gb|DT492077.1|DT492077 WS02549.C21_J16 PT-MB-N-A-15 Populus... 46 0.003
gb|BU861540.1|BU861540 S003D06 Populus imbibed seed cDNA li... 44 0.013
gb|BU871035.1|BU871035 Q026B06 Populus flower cDNA library ... 44 0.013
gb|CK105129.1|CK105129 I073P09.5pR Populus senescing leaves... 44 0.013
gb|CK115481.1|CK115481 Y010E09 Populus infected leaf substr... 44 0.013
gb|CK117128.1|CK117128 B028P71 Hybrid aspen plasmid library... 44 0.013
gb|AJ779243.1|AJ779243 AJ779243 Populus euphratica leaf 3-6... 44 0.013
gb|CX178146.1|CX178146 B08_45-90_04.ab1 leaf inoculated wit... 44 0.013
gb|BP924362.1|BP924362 BP924362 full-length enriched poplar... 44 0.013
gb|DN493397.1|DN493397 Y010E09.3pR Populus infected leaf su... 44 0.013
gb|DN498192.1|DN498192 S003D06.5pR Populus imbibed seed cDN... 44 0.013
gb|DN503379.1|DN503379 Y010E09.5pR Populus infected leaf su... 44 0.013
gb|BI070125.1|BI070125 C014P38U Populus strain T89 leaves P... 42 0.050
gb|BU892899.1|BU892899 P070H04 Populus petioles cDNA librar... 42 0.050
gb|CK095185.1|CK095185 I073P09.3pR Populus senescing leaves... 42 0.050
gb|AJ779880.1|AJ779880 AJ779880 Populus euphratica root 3-6... 42 0.050
gb|CV245755.1|CV245755 WS0259.B21_E16 PT-MB-N-A-15 Populus ... 42 0.050
gb|DT474739.1|DT474739 WS0124.BR_N13 PT-GT-FL-A-3 Populus t... 42 0.050
gb|DT477989.1|DT477989 WS02521.BR_I17 PT-MB-N-A-15 Populus ... 42 0.050
gb|DT506018.1|DT506018 WS01812.C21_H16 PTxD-IL-N-A-9 Populu... 42 0.050
gb|DT508292.1|DT508292 WS02420.BR_J06 PTxD-ICC-N-A-14 Popul... 42 0.050
gb|DT508430.1|DT508430 WS02420.BR_P07 PTxD-ICC-N-A-14 Popul... 42 0.050
gb|DT510318.1|DT510318 WS02426.BR_D10 PTxD-ICC-N-A-14 Popul... 42 0.050
gb|BU828619.1|BU828619 K025P90P Populus apical shoot cDNA l... 40 0.20
gb|BU835022.1|BU835022 T068E10 Populus apical shoot cDNA li... 40 0.20
gb|BU879839.1|BU879839 UM38TD02 Populus flower cDNA library... 40 0.20
gb|CA823134.1|CA823134 R21C10 two-month-old roots from clon... 40 0.20
gb|CK110343.1|CK110343 N055H05 Populus bark cDNA library Po... 40 0.20
gb|CN523348.1|CN523348 GQ015M04.T3_G09 GQ015 Populus tricho... 40 0.20
gb|CN523589.1|CN523589 GQ015M07.T3_C04 GQ015 Populus tricho... 40 0.20
gb|CK318937.1|CK318937 X9P05a10 Populus stem seasonal libra... 40 0.20
gb|AJ767843.1|AJ767843 AJ767843 Populus euphratica leaf adu... 40 0.20
gb|AJ772993.1|AJ772993 AJ772993 Populus euphratica leaf 3-6... 40 0.20
gb|CV131036.1|CV131036 L1P03g10 Populus stem seasonal libra... 40 0.20
gb|CV234839.1|CV234839 WS01216.B21_I19 PT-GT-FL-A-3 Populus... 40 0.20
gb|CF936543.1|CF936543 PO3007C10 Populus tomentiglandulosa ... 40 0.20
gb|CX184813.1|CX184813 C08_45-118_06.ab1 leaf inoculated wi... 40 0.20
gb|CX186977.1|CX186977 G04_45-90_14.ab1 leaf inoculated wit... 40 0.20
gb|BP922486.1|BP922486 BP922486 full-length enriched poplar... 40 0.20
gb|BP924411.1|BP924411 BP924411 full-length enriched poplar... 40 0.20
gb|DT470675.1|DT470675 WS01210.BR_C16 PT-GT-FL-A-3 Populus ... 40 0.20
gb|DT472285.1|DT472285 WS01225.BR_G01 PT-GT-FL-A-3 Populus ... 40 0.20
gb|DT495331.1|DT495331 WS01120.BR_C14 PT-P-FL-A-2 Populus t... 40 0.20
gb|DT497134.1|DT497134 WS01125.BR_J09 PT-P-FL-A-2 Populus t... 40 0.20
gb|DT499380.1|DT499380 WS0118.BR_C08 PT-P-FL-A-2 Populus tr... 40 0.20
gb|DT500930.1|DT500930 PX0019.BR_N16 PT-X-FL-A-1 Populus tr... 40 0.20
>gb|CA821727.1|CA821727 RSH06F08 two-month-old roots from clone 'Beaupre' grown for 19 days
under restricted irrigation Populus trichocarpa x
Populus deltoides cDNA 5', mRNA sequence
Length = 620
Score = 119 bits (60), Expect = 3e-025
Identities = 380/487 (78%)
Strand = Plus / Plus
Query: 242 ggcaagaccaccctcctccacatgctgaaggacgagcggctcgtacagcaccagccgacg 301
|||||||| ||||| || |||||| |||| |||||| | | ||||| || ||||| ||
Sbjct: 132 ggcaagacaacccttcttcacatgttgaaagacgagagattagtacaacatcagccaacc 191
Query: 302 cagtaccccacgtcagaagagttgagcatcggcaggatcaagttcaaggcgttcgacctt 361
||| | || || ||||| || |||||||| || | |||||||||||||| || || |
Sbjct: 192 cagcatccaacatcagaggaattgagcattggaaaaatcaagttcaaggcttttgatttg 251
Query: 362 gggggccaccagatcgcccgccgcgtctggaaggactactacgccaaggttgatgctgtt 421
|| |||||||||||||| || || |||||||| || ||||| || ||||| || || ||
Sbjct: 252 ggcggccaccagatcgctcgtcgtgtctggaaagattactatgctaaggtggacgccgtg 311
Query: 422 gtgtacttggtggatgctgttgacaaggaacgttttgccgagtcgaagaaggagctcgat 481
|| ||| | |||||||| |||||||||| | ||||||||||| |||||||| || |||
Sbjct: 312 gtttacctagtggatgcctttgacaaggagaggtttgccgagtcaaagaaggaactggat 371
Query: 482 gcgcttcttgcagatgactcccttgcaaacgttcctttcctcatactgggcaacaagatt 541
|| || || ||||||| ||| | || || ||||| || || || || ||||||||||||
Sbjct: 372 gccctcctatcagatgaatccttggctaatgttccatttctgattctaggcaacaagatt 431
Query: 542 gacatcccatacgcggcttcagaggaggagctgaggtactacctcggcctgagcaacttc 601
||||| || || || |||||||| || ||||| | || || || || | |||||||
Sbjct: 432 gacattccctatgctgcttcagaagatgagctccgttatagtcttgggctcaacaacttc 491
Query: 602 acaaccgggaagggcaacgtgaacttggccgactccaatgtccggcccctggagatcttc 661
|| || || ||||| || ||||| ||| |||||| ||||||| || || ||| | |||
Sbjct: 492 actactggcaaggggaaggtgaatctggtagactcccatgtccgtcctcttgaggttttc 551
Query: 662 atgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaatggatgtctcagtac 721
||||| ||| | || ||||||||||| || ||||| |||||||| ||||||||||||||
Sbjct: 552 atgtgtagtattgtccgcaagatgggatacggcgatggcttcaagtggatgtctcagtat 611
Query: 722 atcaagt 728
||| |||
Sbjct: 612 atcnagt 618
>gb|BU827781.1|BU827781 K008P84P Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 636
Score = 99.6 bits (50), Expect = 2e-019
Identities = 320/410 (78%)
Strand = Plus / Plus
Query: 164 tggttctatggggtgctggcatcgcttgggctgtggcagaaggaggctaagatcctcttc 223
|||||||||||||| || ||||| ||||| | ||||| || || || ||||| || |||
Sbjct: 73 tggttctatggggttcttgcatctcttggtttatggcaaaaagaagccaagattcttttc 132
Query: 224 cttggcctcgacaacgccggcaagaccaccctcctccacatgctgaaggacgagcggctc 283
| || || || || || |||||||| ||||| || |||||| |||| |||||| || |
Sbjct: 133 ttgggtcttgataatgctggcaagacaacccttcttcacatgttgaaagacgagaggtta 192
Query: 284 gtacagcaccagccgacgcagtaccccacgtcagaagagttgagcatcggcaggatcaag 343
||||| || ||||| || ||| | || || ||||| || |||||||| || | ||||||
Sbjct: 193 gtacaacatcagccaacccagcatccaacatcagaggaattgagcattggaaaaatcaag 252
Query: 344 ttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggactactac 403
|||||||| || || | || |||||||||||||| || || || ||||| || |||||
Sbjct: 253 ttcaaggcttttgatttgggcggccaccagatcgctcgtcgtgtttggaaagattactat 312
Query: 404 gccaaggttgatgctgttgtgtacttggtggatgctgttgacaaggaacgttttgccgag 463
|| ||||| || || || || ||| | |||||||| |||||||||| | |||||||||
Sbjct: 313 gctaaggtggacgccgtggtttacctagtggatgcctttgacaaggagaggtttgccgag 372
Query: 464 tcgaagaaggagctcgatgcgcttcttgcagatgactcccttgcaaacgttcctttcctc 523
|| |||||||| || ||||| || || ||||||| ||| | || || ||||| || ||
Sbjct: 373 tcaaagaaggaactggatgccctcctatcagatgaatccttggctaatgttccatttctg 432
Query: 524 atactgggcaacaagattgacatcccatacgcggcttcagaggaggagct 573
|| || ||||||||||||||||| || || || |||||||| || |||||
Sbjct: 433 attctaggcaacaagattgacattccctatgctgcttcagaagatgagct 482
Score = 71.9 bits (36), Expect = 6e-011
Identities = 81/96 (84%)
Strand = Plus / Plus
Query: 632 gactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggctat 691
|||||||||||||| || || ||| | |||||||||||| | || ||||||||||| ||
Sbjct: 541 gactccaatgtccgtcctcttgaggttttcatgtgcagtattgtccgcaagatgggatac 600
Query: 692 ggcgaaggcttcaaatggatgtctcagtacatcaag 727
|| || |||||||| ||||||||||| || ||||||
Sbjct: 601 ggtgatggcttcaagtggatgtctcaatatatcaag 636
>gb|CF227796.1|CF227796 PtaXM0004G2G0214 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 633
Score = 95.6 bits (48), Expect = 4e-018
Identities = 261/332 (78%)
Strand = Plus / Plus
Query: 242 ggcaagaccaccctcctccacatgctgaaggacgagcggctcgtacagcaccagccgacg 301
|||||||| ||||| || |||||| |||| |||||| || | ||||| || ||||| ||
Sbjct: 157 ggcaagacaacccttcttcacatgttgaaagacgagaggttagtacaacatcagccaacc 216
Query: 302 cagtaccccacgtcagaagagttgagcatcggcaggatcaagttcaaggcgttcgacctt 361
||| | || || ||||| || |||||||| || | |||||||||||||| || || |
Sbjct: 217 cagcatccaacatcagaggaattgagcattggaaaaatcaagttcaaggcttttgatttg 276
Query: 362 gggggccaccagatcgcccgccgcgtctggaaggactactacgccaaggttgatgctgtt 421
|| |||||||||||||| || || || ||||| || ||||| || ||||| || || ||
Sbjct: 277 ggcggccaccagatcgctcgtcgtgtttggaaagattactatgctaaggtggacgcggtg 336
Query: 422 gtgtacttggtggatgctgttgacaaggaacgttttgccgagtcgaagaaggagctcgat 481
|| ||| | |||||||| |||||||||| | ||||||||||| |||||||| || |||
Sbjct: 337 gtttacctagtggatgcatttgacaaggagaggtttgccgagtcaaagaaggaactggat 396
Query: 482 gcgcttcttgcagatgactcccttgcaaacgttcctttcctcatactgggcaacaagatt 541
|| || || ||||||| ||| | || || ||||| || || || || ||||||||||||
Sbjct: 397 gccctcctatcagatgaatccttggctaatgttccatttctgattctaggcaacaagatt 456
Query: 542 gacatcccatacgcggcttcagaggaggagct 573
||||| || || || |||||||| || |||||
Sbjct: 457 gacattccctatgctgcttcagaagatgagct 488
>gb|CF230981.1|CF230981 PtaC0015H5H0515 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 719
Score = 95.6 bits (48), Expect = 4e-018
Identities = 261/332 (78%)
Strand = Plus / Plus
Query: 242 ggcaagaccaccctcctccacatgctgaaggacgagcggctcgtacagcaccagccgacg 301
|||||||| ||||| || |||||| |||| |||||| || | ||||| || ||||| ||
Sbjct: 41 ggcaagacaacccttcttcacatgttgaaagacgagaggttagtacaacatcagccaacc 100
Query: 302 cagtaccccacgtcagaagagttgagcatcggcaggatcaagttcaaggcgttcgacctt 361
||| | || || ||||| || |||||||| || | |||||||||||||| || || |
Sbjct: 101 cagcatccaacatcagaggaattgagcattggaaaaatcaagttcaaggcttttgatttg 160
Query: 362 gggggccaccagatcgcccgccgcgtctggaaggactactacgccaaggttgatgctgtt 421
|| |||||||||||||| || || || ||||| || ||||| || ||||| || || ||
Sbjct: 161 ggcggccaccagatcgctcgtcgtgtttggaaagattactatgctaaggtggacgccgtg 220
Query: 422 gtgtacttggtggatgctgttgacaaggaacgttttgccgagtcgaagaaggagctcgat 481
|| ||| | |||||||| |||||||||| | ||||||||||| |||||||| || |||
Sbjct: 221 gtttacctagtggatgcctttgacaaggagaggtttgccgagtcaaagaaggaactggat 280
Query: 482 gcgcttcttgcagatgactcccttgcaaacgttcctttcctcatactgggcaacaagatt 541
|| || || ||||||| ||| | || || ||||| || || || || ||||||||||||
Sbjct: 281 gccctcctatcagatgaatccttggctaatgttccatttctgattctaggcaacaagatt 340
Query: 542 gacatcccatacgcggcttcagaggaggagct 573
||||| || || || |||||||| || |||||
Sbjct: 341 gacattccctatgctgcttcagaagatgagct 372
Score = 73.8 bits (37), Expect = 1e-011
Identities = 82/97 (84%)
Strand = Plus / Plus
Query: 632 gactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggctat 691
|||||||||||||| || || ||| | |||||||||||| | || ||||||||||| ||
Sbjct: 431 gactccaatgtccgtcctcttgaggttttcatgtgcagtattgtccgcaagatgggatac 490
Query: 692 ggcgaaggcttcaaatggatgtctcagtacatcaagt 728
|| || |||||||| ||||||||||| || |||||||
Sbjct: 491 ggtgatggcttcaagtggatgtctcaatatatcaagt 527
>gb|CV261857.1|CV261857 WS02017.B21_P11 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02017_P11 3', mRNA sequence
Length = 802
Score = 95.6 bits (48), Expect = 4e-018
Identities = 261/332 (78%)
Strand = Plus / Minus
Query: 242 ggcaagaccaccctcctccacatgctgaaggacgagcggctcgtacagcaccagccgacg 301
|||||||| ||||| || |||||| |||| |||||| | | ||||| || ||||| ||
Sbjct: 720 ggcaagacaacccttcttcacatgttgaaagacgagagattagtacaacatcagccaacc 661
Query: 302 cagtaccccacgtcagaagagttgagcatcggcaggatcaagttcaaggcgttcgacctt 361
||| | || || ||||| || |||||||| || | |||||||||||||| || || |
Sbjct: 660 cagcatccaacatcagaggaattgagcattggaaaaatcaagttcaaggcttttgatttg 601
Query: 362 gggggccaccagatcgcccgccgcgtctggaaggactactacgccaaggttgatgctgtt 421
|| |||||||||||||| || || || ||||| || ||||| |||||||| || || ||
Sbjct: 600 ggcggccaccagatcgctcgtcgtgtttggaaagattactatgccaaggtggacgccgtg 541
Query: 422 gtgtacttggtggatgctgttgacaaggaacgttttgccgagtcgaagaaggagctcgat 481
|| ||| | |||||||| |||||||||| | ||||||||||| |||||||| || |||
Sbjct: 540 gtttacctagtggatgcctttgacaaggagaggtttgccgagtcaaagaaggaactggat 481
Query: 482 gcgcttcttgcagatgactcccttgcaaacgttcctttcctcatactgggcaacaagatt 541
|| || || ||||||| ||| | || || ||||| || || || || ||||||||||||
Sbjct: 480 gccctcctatcagatgaatccttggctaatgttccatttctgattctaggcaacaagatt 421
Query: 542 gacatcccatacgcggcttcagaggaggagct 573
||||| || || || |||||||| || |||||
Sbjct: 420 gacattccctatgctgcttcagaagatgagct 389
Score = 65.9 bits (33), Expect = 3e-009
Identities = 81/97 (83%)
Strand = Plus / Minus
Query: 632 gactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggctat 691
|||||||||||||| || || ||| | |||||||| ||| | || ||||||||||| ||
Sbjct: 330 gactccaatgtccgtcctcttgaggttttcatgtgtagtattgtccgcaagatgggatac 271
Query: 692 ggcgaaggcttcaaatggatgtctcagtacatcaagt 728
|| || |||||||| ||||||||||| || |||||||
Sbjct: 270 ggtgatggcttcaagtggatgtctcaatatatcaagt 234
>gb|AI166600.1|AI166600 xylem.est.416 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 561
Score = 91.7 bits (46), Expect = 6e-017
Identities = 319/410 (77%)
Strand = Plus / Plus
Query: 164 tggttctatggggtgctggcatcgcttgggctgtggcagaaggaggctaagatcctcttc 223
|||||||||||||| || ||||| ||||| | ||||| || || || ||||| || |||
Sbjct: 69 tggttctatggggttcttgcatctcttggtttatggcaaaaagaagccaagattcttttc 128
Query: 224 cttggcctcgacaacgccggcaagaccaccctcctccacatgctgaaggacgagcggctc 283
| || || || || || |||||||| ||||| || |||||| |||| |||||| | |
Sbjct: 129 ttgggtcttgataatgctggcaagacaacccttcttcacatgttgaaagacgagagatta 188
Query: 284 gtacagcaccagccgacgcagtaccccacgtcagaagagttgagcatcggcaggatcaag 343
||||| || ||||| || ||| | || || ||||| || |||||||| || | ||||||
Sbjct: 189 gtacaacatcagccaacccagcatccaacatcagaggaattgagcattggaaaaatcaag 248
Query: 344 ttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggactactac 403
|||||||| || || | || |||||||||||||| || || || ||||| || |||||
Sbjct: 249 ttcaaggcttttgatttgggcggccaccagatcgctcgtcgtgtttggaaagattactat 308
Query: 404 gccaaggttgatgctgttgtgtacttggtggatgctgttgacaaggaacgttttgccgag 463
|| ||||| || || || || ||| | |||||||| |||||||||| | |||||||||
Sbjct: 309 gctaaggtcgacgccgtggtttacctagtggatgcctttgacaaggagaggtttgccgag 368
Query: 464 tcgaagaaggagctcgatgcgcttcttgcagatgactcccttgcaaacgttcctttcctc 523
|| |||||||| || ||||| || || ||||||| ||| | || || ||||| || ||
Sbjct: 369 tcaaagaaggaactggatgccctcctatcagatgaatccttggctaatgttccatttctg 428
Query: 524 atactgggcaacaagattgacatcccatacgcggcttcagaggaggagct 573
|| || ||||||||||||||||| || || || |||||||| || |||||
Sbjct: 429 attctaggcaacaagattgacattccctatgctgcttcagaagatgagct 478
>gb|DT498889.1|DT498889 WS0116.BR_K09 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0116_K09
5', mRNA sequence
Length = 638
Score = 91.7 bits (46), Expect = 6e-017
Identities = 319/410 (77%)
Strand = Plus / Plus
Query: 164 tggttctatggggtgctggcatcgcttgggctgtggcagaaggaggctaagatcctcttc 223
||||| |||||||| || ||||| ||||| | ||||| |||||||| ||||| || |||
Sbjct: 110 tggttttatggggttcttgcatctcttggtttatggcaaaaggaggccaagattcttttc 169
Query: 224 cttggcctcgacaacgccggcaagaccaccctcctccacatgctgaaggacgagcggctc 283
| || || || || || |||||||| ||||| || |||||| | || |||||| | |
Sbjct: 170 ttgggtcttgataatgctggcaagacaacccttcttcacatgttaaaagacgagagattg 229
Query: 284 gtacagcaccagccgacgcagtaccccacgtcagaagagttgagcatcggcaggatcaag 343
|||||||| || || || ||| | || || ||||| || ||||| || || | ||||||
Sbjct: 230 gtacagcatcaacccacccagcatccaacatcagaggaattgagtattggaaaaatcaag 289
Query: 344 ttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggactactac 403
|||||||| || || || || || ||||| |||||||| || || |||||||| ||||||
Sbjct: 290 ttcaaggcttttgatctgggtggtcaccaaatcgcccgtcgtgtttggaaggattactac 349
Query: 404 gccaaggttgatgctgttgtgtacttggtggatgctgttgacaaggaacgttttgccgag 463
|||||||| ||||| || || ||| | |||||||| |||||||| | ||||| |||
Sbjct: 350 gccaaggtggatgcggtggtatacctagtggatgcctatgacaaggttaggtttgctgag 409
Query: 464 tcgaagaaggagctcgatgcgcttcttgcagatgactcccttgcaaacgttcctttcctc 523
|| |||||||| || ||||| || ||| ||||||| ||| | || || ||||| || ||
Sbjct: 410 tcaaagaaggaactggatgccctcctttcagatgaatccttggctaatgttccatttctg 469
Query: 524 atactgggcaacaagattgacatcccatacgcggcttcagaggaggagct 573
|| | ||||||||||||||||| || || || |||||||| || |||||
Sbjct: 470 atcttaggcaacaagattgacattccctatgcagcttcagaagatgagct 519
Score = 50.1 bits (25), Expect = 2e-004
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 632 gactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggctat 691
|||||||||||||| || || ||| | |||||||||||| | || ||||||||||| |||
Sbjct: 578 gactccaatgtccgtcctctcgaggttttcatgtgcagtattgtccgcaagatgggatat 637
Query: 692 g 692
|
Sbjct: 638 g 638
>gb|CA925824.1|CA925824 MTU7TL.P6.D02 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 466
Score = 89.7 bits (45), Expect = 2e-016
Identities = 84/97 (86%)
Strand = Plus / Minus
Query: 632 gactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggctat 691
|||||||||||||| || || ||| | |||||||||||| | || ||||||||||| |||
Sbjct: 122 gactccaatgtccgtcctctcgaggttttcatgtgcagtattgtccgcaagatgggatat 63
Query: 692 ggcgaaggcttcaaatggatgtctcagtacatcaagt 728
|| || |||||||| ||||||||||| ||||||||||
Sbjct: 62 ggtgatggcttcaagtggatgtctcaatacatcaagt 26
Score = 79.8 bits (40), Expect = 2e-013
Identities = 187/236 (79%)
Strand = Plus / Minus
Query: 338 atcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggac 397
|||||||||||||| || || || || || ||||| || ||||| || || ||||||||
Sbjct: 416 atcaagttcaaggcttttgatctgggaggtcaccaaattgcccgtcgtgtttggaaggat 357
Query: 398 tactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaaggaacgtttt 457
|||||||||||||| ||||| || || ||| | |||||||| ||||||||| | |||
Sbjct: 356 tactacgccaaggtggatgcggtggtatacctagtggatgccaatgacaaggagaggttt 297
Query: 458 gccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgcaaacgttcct 517
|| ||||| |||||||| || ||||| || ||| ||||||| ||| | || | |||||
Sbjct: 296 gctgagtcaaagaaggaactggatgccctcctttcagatgaatccttggcgactgttcca 237
Query: 518 ttcctcatactgggcaacaagattgacatcccatacgcggcttcagaggaggagct 573
|| || || | ||||||||||||||||| || || || |||||||| || |||||
Sbjct: 236 tttctgatcttaggcaacaagattgacattccctatgcagcttcagaagatgagct 181
>gb|CA926734.1|CA926734 MTU6CR.P18.E09 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 469
Score = 89.7 bits (45), Expect = 2e-016
Identities = 84/97 (86%)
Strand = Plus / Minus
Query: 632 gactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggctat 691
|||||||||||||| || || ||| | |||||||||||| | || ||||||||||| |||
Sbjct: 122 gactccaatgtccgtcctctcgaggttttcatgtgcagtattgtccgcaagatgggatat 63
Query: 692 ggcgaaggcttcaaatggatgtctcagtacatcaagt 728
|| || |||||||| ||||||||||| ||||||||||
Sbjct: 62 ggtgatggcttcaagtggatgtctcaatacatcaagt 26
Score = 79.8 bits (40), Expect = 2e-013
Identities = 187/236 (79%)
Strand = Plus / Minus
Query: 338 atcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggac 397
|||||||||||||| || || || || || ||||| || ||||| || || ||||||||
Sbjct: 416 atcaagttcaaggcttttgatctgggaggtcaccaaattgcccgtcgtgtttggaaggat 357
Query: 398 tactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaaggaacgtttt 457
|||||||||||||| ||||| || || ||| | |||||||| ||||||||| | |||
Sbjct: 356 tactacgccaaggtggatgcggtggtatacctagtggatgccaatgacaaggagaggttt 297
Query: 458 gccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgcaaacgttcct 517
|| ||||| |||||||| || ||||| || ||| ||||||| ||| | || | |||||
Sbjct: 296 gctgagtcaaagaaggaactggatgccctcctttcagatgaatccttggcgactgttcca 237
Query: 518 ttcctcatactgggcaacaagattgacatcccatacgcggcttcagaggaggagct 573
|| || || | ||||||||||||||||| || || || |||||||| || |||||
Sbjct: 236 tttctgatcttaggcaacaagattgacattccctatgcagcttcagaagatgagct 181
>gb|CV232090.1|CV232090 WS0196.B21_I09 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0196_I09 3', mRNA sequence
Length = 737
Score = 89.7 bits (45), Expect = 2e-016
Identities = 84/97 (86%)
Strand = Plus / Minus
Query: 632 gactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggctat 691
|||||||||||||| || || ||| | |||||||||||| | || ||||||||||| |||
Sbjct: 299 gactccaatgtccgtcctctcgaggttttcatgtgcagtattgtccgcaagatgggatat 240
Query: 692 ggcgaaggcttcaaatggatgtctcagtacatcaagt 728
|| || |||||||| ||||||||||| ||||||||||
Sbjct: 239 ggtgatggcttcaagtggatgtctcaatacatcaagt 203
Score = 87.7 bits (44), Expect = 9e-016
Identities = 188/236 (79%)
Strand = Plus / Minus
Query: 338 atcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggac 397
|||||||||||||| || || || || || ||||| |||||||| || || ||||||||
Sbjct: 593 atcaagttcaaggcttttgatctgggtggtcaccaaatcgcccgtcgtgtttggaaggat 534
Query: 398 tactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaaggaacgtttt 457
|||||||||||||| ||||| || || ||| | |||||||| |||||||| | |||
Sbjct: 533 tactacgccaaggtggatgcggtggtatacctagtggatgcctatgacaaggttaggttt 474
Query: 458 gccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgcaaacgttcct 517
|| ||||| |||||||| || ||||| || ||| ||||||| ||| | || || |||||
Sbjct: 473 gctgagtcaaagaaggaactggatgccctcctttcagatgaatccttggctaatgttcca 414
Query: 518 ttcctcatactgggcaacaagattgacatcccatacgcggcttcagaggaggagct 573
|| || || | ||||||||||||||||| || || || |||||||| || |||||
Sbjct: 413 tttctgatcttaggcaacaagattgacattccctatgcagcttcagaagatgagct 358
>gb|CV251335.1|CV251335 WS0116.B21_K09 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0116_K09 3', mRNA sequence
Length = 690
Score = 89.7 bits (45), Expect = 2e-016
Identities = 84/97 (86%)
Strand = Plus / Minus
Query: 632 gactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggctat 691
|||||||||||||| || || ||| | |||||||||||| | || ||||||||||| |||
Sbjct: 372 gactccaatgtccgtcctctcgaggttttcatgtgcagtattgtccgcaagatgggatat 313
Query: 692 ggcgaaggcttcaaatggatgtctcagtacatcaagt 728
|| || |||||||| ||||||||||| ||||||||||
Sbjct: 312 ggtgatggcttcaagtggatgtctcaatacatcaagt 276
Score = 87.7 bits (44), Expect = 9e-016
Identities = 188/236 (79%)
Strand = Plus / Minus
Query: 338 atcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggac 397
|||||||||||||| || || || || || ||||| |||||||| || || ||||||||
Sbjct: 666 atcaagttcaaggcttttgatctgggtggtcaccaaatcgcccgtcgtgtttggaaggat 607
Query: 398 tactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaaggaacgtttt 457
|||||||||||||| ||||| || || ||| | |||||||| |||||||| | |||
Sbjct: 606 tactacgccaaggtggatgcggtggtatacctagtggatgcctatgacaaggttaggttt 547
Query: 458 gccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgcaaacgttcct 517
|| ||||| |||||||| || ||||| || ||| ||||||| ||| | || || |||||
Sbjct: 546 gctgagtcaaagaaggaactggatgccctcctttcagatgaatccttggctaatgttcca 487
Query: 518 ttcctcatactgggcaacaagattgacatcccatacgcggcttcagaggaggagct 573
|| || || | ||||||||||||||||| || || || |||||||| || |||||
Sbjct: 486 tttctgatcttaggcaacaagattgacattccctatgcagcttcagaagatgagct 431
>gb|CX659690.1|CX659690 PO01033G12 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01033G12 5', mRNA sequence
Length = 703
Score = 89.7 bits (45), Expect = 2e-016
Identities = 84/97 (86%)
Strand = Plus / Plus
Query: 632 gactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggctat 691
|||||||||||||| || || ||| | |||||||||||| | || ||||||||||| |||
Sbjct: 422 gactccaatgtccgtcctctcgaggttttcatgtgcagtattgtccgcaagatgggatat 481
Query: 692 ggcgaaggcttcaaatggatgtctcagtacatcaagt 728
|| || |||||||| ||||||||||| ||||||||||
Sbjct: 482 ggtgatggcttcaagtggatgtctcaatacatcaagt 518
Score = 79.8 bits (40), Expect = 2e-013
Identities = 187/236 (79%)
Strand = Plus / Plus
Query: 338 atcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggac 397
|||||||||||||| || || || || || ||||| || ||||| || || ||||||||
Sbjct: 128 atcaagttcaaggcttttgatctgggaggtcaccaaattgcccgtcgtgtttggaaggat 187
Query: 398 tactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaaggaacgtttt 457
|||||||||||||| ||||| || || ||| | |||||||| ||||||||| | |||
Sbjct: 188 tactacgccaaggtggatgcggtggtatacctagtggatgccaatgacaaggagaggttt 247
Query: 458 gccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgcaaacgttcct 517
|| ||||| |||||||| || ||||| || ||| ||||||| ||| | || | |||||
Sbjct: 248 gctgagtcaaagaaggaactggatgccctcctttcagatgaatccttggcgactgttcca 307
Query: 518 ttcctcatactgggcaacaagattgacatcccatacgcggcttcagaggaggagct 573
|| || || | ||||||||||||||||| || || || |||||||| || |||||
Sbjct: 308 tttctgatcttaggcaacaagattgacattccctatgcagcttcagaagatgagct 363
>gb|CA821848.1|CA821848 RSH08D07 two-month-old roots from clone 'Beaupre' grown for 19 days
under restricted irrigation Populus trichocarpa x
Populus deltoides cDNA 5', mRNA sequence
Length = 572
Score = 87.7 bits (44), Expect = 9e-016
Identities = 260/332 (78%)
Strand = Plus / Plus
Query: 242 ggcaagaccaccctcctccacatgctgaaggacgagcggctcgtacagcaccagccgacg 301
|||||||| ||||| || |||||| |||| |||||| | | ||||| || ||||| ||
Sbjct: 157 ggcaagacaacccttcttcacatgttgaaagacgagagattagtacaacatcagccaacc 216
Query: 302 cagtaccccacgtcagaagagttgagcatcggcaggatcaagttcaaggcgttcgacctt 361
||| | || || ||||| || |||||||| || | |||||||||||||| || || |
Sbjct: 217 cagcatccaacatcagaggaattgagcattggaaaaatcaagttcaaggcttttgatttg 276
Query: 362 gggggccaccagatcgcccgccgcgtctggaaggactactacgccaaggttgatgctgtt 421
|| |||||||||||||| || || || ||||| || ||||| || ||||| || || ||
Sbjct: 277 ggcggccaccagatcgctcgtcgtgtttggaaagattactatgctaaggtcgacgccgtg 336
Query: 422 gtgtacttggtggatgctgttgacaaggaacgttttgccgagtcgaagaaggagctcgat 481
|| ||| | |||||||| |||||||||| | ||||||||||| |||||||| || |||
Sbjct: 337 gtttacctagtggatgcctttgacaaggagaggtttgccgagtcaaagaaggaactggat 396
Query: 482 gcgcttcttgcagatgactcccttgcaaacgttcctttcctcatactgggcaacaagatt 541
|| || || ||||||| ||| | || || ||||| || || || || ||||||||||||
Sbjct: 397 gccctcctatcagatgaatccttggctaatgttccatttctgattctaggcaacaagatt 456
Query: 542 gacatcccatacgcggcttcagaggaggagct 573
||||| || || || |||||||| || |||||
Sbjct: 457 gacattccctatgctgcttcagaagatgagct 488
>gb|CA825610.1|CA825610 R62D03 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 589
Score = 87.7 bits (44), Expect = 9e-016
Identities = 260/332 (78%)
Strand = Plus / Plus
Query: 242 ggcaagaccaccctcctccacatgctgaaggacgagcggctcgtacagcaccagccgacg 301
|||||||| ||||| || |||||| |||| |||||| | | ||||| || ||||| ||
Sbjct: 102 ggcaagacaacccttcttcacatgttgaaagacgagagattagtacaacatcagccaacc 161
Query: 302 cagtaccccacgtcagaagagttgagcatcggcaggatcaagttcaaggcgttcgacctt 361
||| | || || ||||| || |||||||| || | |||||||||||||| || || |
Sbjct: 162 cagcatccaacatcagaggaattgagcattggaaaaatcaagttcaaggcttttgatttg 221
Query: 362 gggggccaccagatcgcccgccgcgtctggaaggactactacgccaaggttgatgctgtt 421
|| |||||||||||||| || || || ||||| || ||||| || ||||| || || ||
Sbjct: 222 ggcggccaccagatcgctcgtcgtgtttggaaagattactatgctaaggtcgacgccgtg 281
Query: 422 gtgtacttggtggatgctgttgacaaggaacgttttgccgagtcgaagaaggagctcgat 481
|| ||| | |||||||| |||||||||| | ||||||||||| |||||||| || |||
Sbjct: 282 gtttacctagtggatgcctttgacaaggagaggtttgccgagtcaaagaaggaactggat 341
Query: 482 gcgcttcttgcagatgactcccttgcaaacgttcctttcctcatactgggcaacaagatt 541
|| || || ||||||| ||| | || || ||||| || || || || ||||||||||||
Sbjct: 342 gccctcctatcagatgaatccttggctaatgttccatttctgattctaggcaacaagatt 401
Query: 542 gacatcccatacgcggcttcagaggaggagct 573
||||| || || || |||||||| || |||||
Sbjct: 402 gacattccctatgctgcttcagaagatgagct 433
Score = 65.9 bits (33), Expect = 3e-009
Identities = 81/97 (83%)
Strand = Plus / Plus
Query: 632 gactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggctat 691
|||||||||||||| || || ||| | |||||||| ||| | || ||||||||||| ||
Sbjct: 492 gactccaatgtccgtcctcttgaggttttcatgtgtagtattgtccgcaagatgggatac 551
Query: 692 ggcgaaggcttcaaatggatgtctcagtacatcaagt 728
|| || |||||||| ||||||||||| || |||||||
Sbjct: 552 ggtgatggcttcaagtggatgtctcaatatatcaagt 588
>gb|BU875363.1|BU875363 V006A07 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 444
Score = 85.7 bits (43), Expect = 4e-015
Identities = 298/383 (77%)
Strand = Plus / Plus
Query: 164 tggttctatggggtgctggcatcgcttgggctgtggcagaaggaggctaagatcctcttc 223
||||| |||||||| || ||||| ||||| | ||||| |||||||| ||||| || |||
Sbjct: 26 tggttttatggggttcttgcatctcttggtttatggcaaaaggaggccaagattcttttc 85
Query: 224 cttggcctcgacaacgccggcaagaccaccctcctccacatgctgaaggacgagcggctc 283
| || || || || || |||||||| ||||| || |||||| | || |||||| | |
Sbjct: 86 ttgggtcttgataatgctggcaagacaacccttcttcacatgttaaaagacgagagattg 145
Query: 284 gtacagcaccagccgacgcagtaccccacgtcagaagagttgagcatcggcaggatcaag 343
|||||||| || || || ||| | || || ||||| || ||||| || || | ||||||
Sbjct: 146 gtacagcatcaacccacccagcatccaacatcagaggaattgagtattggaaaaatcaag 205
Query: 344 ttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggactactac 403
|||||||| || || || || || ||||| |||||||| || || |||||||| ||||||
Sbjct: 206 ttcaaggcttttgatctgggtggtcaccaaatcgcccgtcgtgtttggaaggattactac 265
Query: 404 gccaaggttgatgctgttgtgtacttggtggatgctgttgacaaggaacgttttgccgag 463
|||||||| ||||| || || ||| | |||||||| |||||||| | ||||| |||
Sbjct: 266 gccaaggtggatgcggtggtatacctagtggatgcctatgacaaggttaggtttgctgag 325
Query: 464 tcgaagaaggagctcgatgcgcttcttgcagatgactcccttgcaaacgttcctttcctc 523
|| |||||||| || ||||| || ||| ||||||| ||| | || || ||||| || ||
Sbjct: 326 tcaaagaaggaactggatgccctcctttcagatgaatccttggctaatgttccatttctg 385
Query: 524 atactgggcaacaagattgacat 546
|| | |||||||||||||||||
Sbjct: 386 atcttaggcaacaagattgacat 408
>gb|BI127215.1|BI127215 G057P02Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 350
Score = 83.8 bits (42), Expect = 1e-014
Identities = 135/166 (81%)
Strand = Plus / Plus
Query: 528 tgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcg 587
|||||||||||||||| |||||||| || || ||||| || ||| || | ||| |||| |
Sbjct: 99 tgggcaacaagattgatatcccatatgctgcctcagaagatgagttgcgttacaacctgg 158
Query: 588 gcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggc 647
| || | ||||||||| || || ||||| || |||||||||| |||||| |||||||| |
Sbjct: 159 gtctcaccaacttcaccactggcaagggtaaggtgaacttggtcgactcaaatgtccgtc 218
Query: 648 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatgg 693
|||| ||| | |||||||| || | || ||||| |||||||||||
Sbjct: 219 cccttgaggtattcatgtgtagcattgtccgcaaaatgggctatgg 264
>gb|CF233644.1|CF233644 PtaJXO0026A2A0202 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 646
Score = 83.8 bits (42), Expect = 1e-014
Identities = 239/305 (78%)
Strand = Plus / Plus
Query: 242 ggcaagaccaccctcctccacatgctgaaggacgagcggctcgtacagcaccagccgacg 301
|||||||| ||||| || |||||| |||| |||||| || | ||||| || ||||| ||
Sbjct: 251 ggcaagacaacccttcttcacatgttgaaagacgagaggttagtacaacatcagccaacc 310
Query: 302 cagtaccccacgtcagaagagttgagcatcggcaggatcaagttcaaggcgttcgacctt 361
||| | || || ||||| || |||||||| || | |||||||||||||| || || |
Sbjct: 311 cagcatccaacatcagaggaattgagcattggaaaaatcaagttcaaggcttttgatttg 370
Query: 362 gggggccaccagatcgcccgccgcgtctggaaggactactacgccaaggttgatgctgtt 421
|| |||||||||||||| || || || ||||| || ||||| || ||||| || || ||
Sbjct: 371 ggcggccaccagatcgctcgtcgtgtttggaaagattactatgctaaggtggacgcggtg 430
Query: 422 gtgtacttggtggatgctgttgacaaggaacgttttgccgagtcgaagaaggagctcgat 481
|| ||| | |||||||| |||||||||| | ||||||||||| |||||||| || |||
Sbjct: 431 gtttacctagtggatgcatttgacaaggagaggtttgccgagtcaaagaaggaactggat 490
Query: 482 gcgcttcttgcagatgactcccttgcaaacgttcctttcctcatactgggcaacaagatt 541
|| || || || |||| ||| | || || ||||| || || || || ||||||||||||
Sbjct: 491 gccctcctatcanatgaatccttggctaatgttccatttctgattctaggcaacaagatt 550
Query: 542 gacat 546
|||||
Sbjct: 551 gacat 555
>gb|CK107762.1|CK107762 G057P02 Populus tension wood cDNA library Populus tremula x Populus
tremuloides cDNA clone G057P02 5', mRNA sequence
Length = 337
Score = 83.8 bits (42), Expect = 1e-014
Identities = 135/166 (81%)
Strand = Plus / Plus
Query: 528 tgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcg 587
|||||||||||||||| |||||||| || || ||||| || ||| || | ||| |||| |
Sbjct: 98 tgggcaacaagattgatatcccatatgctgcctcagaagatgagttgcgttacaacctgg 157
Query: 588 gcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggc 647
| || | ||||||||| || || ||||| || |||||||||| |||||| |||||||| |
Sbjct: 158 gtctcaccaacttcaccactggcaagggtaaggtgaacttggtcgactcaaatgtccgtc 217
Query: 648 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatgg 693
|||| ||| | |||||||| || | || ||||| |||||||||||
Sbjct: 218 cccttgaggtattcatgtgtagcattgtccgcaaaatgggctatgg 263
>gb|DN492590.1|DN492590 X027F04.3pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X027F04 3', mRNA sequence
Length = 630
Score = 83.8 bits (42), Expect = 1e-014
Identities = 135/166 (81%)
Strand = Plus / Minus
Query: 528 tgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcg 587
|||||||||||||||| |||||||| || || ||||| || ||| || | ||| |||| |
Sbjct: 428 tgggcaacaagattgatatcccatatgctgcctcagaagatgagttgcgttacaacctgg 369
Query: 588 gcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggc 647
| || | ||||||||| || || ||||| || |||||||||| |||||| |||||||| |
Sbjct: 368 gtctcaccaacttcaccactggcaagggtaaggtgaacttggtcgactcaaatgtccgtc 309
Query: 648 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatgg 693
|||| ||| | |||||||| || | || ||||| |||||||||||
Sbjct: 308 cccttgaggtattcatgtgtagcattgtccgcaaaatgggctatgg 263
>gb|DN502617.1|DN502617 X027F02.5pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X027F02 5', mRNA sequence
Length = 635
Score = 83.8 bits (42), Expect = 1e-014
Identities = 135/166 (81%)
Strand = Plus / Plus
Query: 528 tgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcg 587
|||||||||||||||| |||||||| || || ||||| || ||| || | ||| |||| |
Sbjct: 202 tgggcaacaagattgatatcccatatgctgcctcagaagatgagttgcgttacaacctgg 261
Query: 588 gcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggc 647
| || | ||||||||| || || ||||| || |||||||||| |||||| |||||||| |
Sbjct: 262 gtctcaccaacttcaccactggcaagggtaaggtgaacttggtcgactcaaatgtccgtc 321
Query: 648 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatgg 693
|||| ||| | |||||||| || | || ||||| |||||||||||
Sbjct: 322 cccttgaggtattcatgtgtagcattgtccgcaaaatgggctatgg 367
>gb|DN503693.1|DN503693 X018G08.3pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X018G08 3', mRNA sequence
Length = 627
Score = 83.8 bits (42), Expect = 1e-014
Identities = 135/166 (81%)
Strand = Plus / Minus
Query: 528 tgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcg 587
|||||||||||||||| |||||||| || || ||||| || ||| || | ||| |||| |
Sbjct: 425 tgggcaacaagattgatatcccatatgctgcctcagaagatgagttgcgttacaacctgg 366
Query: 588 gcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggc 647
| || | ||||||||| || || ||||| || |||||||||| |||||| |||||||| |
Sbjct: 365 gtctcaccaacttcaccactggcaagggtaaggtgaacttggtcgactcaaatgtccgtc 306
Query: 648 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatgg 693
|||| ||| | |||||||| || | || ||||| |||||||||||
Sbjct: 305 cccttgaggtattcatgtgtagcattgtccgcaaaatgggctatgg 260
>gb|DN503774.1|DN503774 X018G08.5pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X018G08 5', mRNA sequence
Length = 625
Score = 83.8 bits (42), Expect = 1e-014
Identities = 135/166 (81%)
Strand = Plus / Plus
Query: 528 tgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcg 587
|||||||||||||||| |||||||| || || ||||| || ||| || | ||| |||| |
Sbjct: 209 tgggcaacaagattgatatcccatatgctgcctcagaagatgagttgcgttacaacctgg 268
Query: 588 gcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggc 647
| || | ||||||||| || || ||||| || |||||||||| |||||| |||||||| |
Sbjct: 269 gtctcaccaacttcaccactggcaagggtaaggtgaacttggtcgactcaaatgtccgtc 328
Query: 648 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatgg 693
|||| ||| | |||||||| || | || ||||| |||||||||||
Sbjct: 329 cccttgaggtattcatgtgtagcattgtccgcaaaatgggctatgg 374
>gb|BU825782.1|BU825782 UK113TA07 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 596
Score = 81.8 bits (41), Expect = 6e-014
Identities = 125/153 (81%)
Strand = Plus / Plus
Query: 287 cagcaccagccgacgcagtaccccacgtcagaagagttgagcatcggcaggatcaagttc 346
||||| ||||| |||||||| || || ||||| || ||||| || |||| |||||||||
Sbjct: 261 cagcatcagccaacgcagtatccaacatcagaggaattgagtataggcaaaatcaagttc 320
Query: 347 aaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggactactacgcc 406
||||| || || | || ||||||||||| ||||| || || ||||| || ||||| |||
Sbjct: 321 aaggcttttgatttgggtggccaccagattgcccgtcgagtttggaaagattactatgcc 380
Query: 407 aaggttgatgctgttgtgtacttggtggatgct 439
||||| ||||||||||| ||| |||| ||||||
Sbjct: 381 aaggtggatgctgttgtttacctggtagatgct 413
>gb|BU826918.1|BU826918 UK126TD02 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 576
Score = 81.8 bits (41), Expect = 6e-014
Identities = 125/153 (81%)
Strand = Plus / Plus
Query: 287 cagcaccagccgacgcagtaccccacgtcagaagagttgagcatcggcaggatcaagttc 346
||||| ||||| |||||||| || || ||||| || ||||| || |||| |||||||||
Sbjct: 261 cagcatcagccaacgcagtatccaacatcagaggaattgagtataggcaaaatcaagttc 320
Query: 347 aaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggactactacgcc 406
||||| || || | || ||||||||||| ||||| || || ||||| || ||||| |||
Sbjct: 321 aaggcttttgatttgggtggccaccagattgcccgtcgagtttggaaagattactatgcc 380
Query: 407 aaggttgatgctgttgtgtacttggtggatgct 439
||||| ||||||||||| ||| |||| ||||||
Sbjct: 381 aaggtggatgctgttgtttacctggtagatgct 413
>gb|CA931968.1|CA931968 MTU4TA.P25.C03 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 466
Score = 81.8 bits (41), Expect = 6e-014
Identities = 83/97 (85%)
Strand = Plus / Minus
Query: 632 gactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggctat 691
|||||||||||||| || || ||| | |||||||||||| | || ||||||||||| |||
Sbjct: 122 gactccaatgtccgtcctctcgaggttttcatgtgcagtattgtccgcaagatgggatat 63
Query: 692 ggcgaaggcttcaaatggatgtctcagtacatcaagt 728
|| || |||||||| |||||||||| ||||||||||
Sbjct: 62 ggtgatggcttcaagtggatgtctcgatacatcaagt 26
Score = 79.8 bits (40), Expect = 2e-013
Identities = 187/236 (79%)
Strand = Plus / Minus
Query: 338 atcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggac 397
|||||||||||||| || || || || || ||||| || ||||| || || ||||||||
Sbjct: 416 atcaagttcaaggcttttgatctgggaggtcaccaaattgcccgtcgtgtttggaaggat 357
Query: 398 tactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaaggaacgtttt 457
|||||||||||||| ||||| || || ||| | |||||||| ||||||||| | |||
Sbjct: 356 tactacgccaaggtggatgcggtggtatacctagtggatgccaatgacaaggagaggttt 297
Query: 458 gccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgcaaacgttcct 517
|| ||||| |||||||| || ||||| || ||| ||||||| ||| | || | |||||
Sbjct: 296 gctgagtcaaagaaggaactggatgccctcctttcagatgaatccttggcgactgttcca 237
Query: 518 ttcctcatactgggcaacaagattgacatcccatacgcggcttcagaggaggagct 573
|| || || | ||||||||||||||||| || || || |||||||| || |||||
Sbjct: 236 tttctgatcttaggcaacaagattgacattccctatgcagcttcagaagatgagct 181
>gb|CV245673.1|CV245673 WS0259.B21_B05 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0259_B05 3', mRNA sequence
Length = 760
Score = 81.8 bits (41), Expect = 6e-014
Identities = 161/201 (80%)
Strand = Plus / Minus
Query: 528 tgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcg 587
|||||||||||||||| |||||| | || || ||||| || ||| || | | |||||| |
Sbjct: 411 tgggcaacaagattgatatcccagatgctgcctcagaagatgagttgcgtttctacctgg 352
Query: 588 gcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggc 647
| || | ||||||||| ||||| ||||| || |||||||||| ||||| |||||||| |
Sbjct: 351 gtcttaccaacttcaccaccggcaagggtaaggtgaacttggtagactcaaatgtccgtc 292
Query: 648 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaat 707
|||| ||| | |||||||| || | || ||||| ||||||||||| || || |||| |
Sbjct: 291 ccctcgaggtgttcatgtgtagcattgtccgcaaaatgggctatggagagggtttcaggt 232
Query: 708 ggatgtctcagtacatcaagt 728
|| | |||||||| |||||||
Sbjct: 231 ggctttctcagtatatcaagt 211
Score = 69.9 bits (35), Expect = 2e-010
Identities = 119/147 (80%)
Strand = Plus / Minus
Query: 293 cagccgacgcagtaccccacgtcagaagagttgagcatcggcaggatcaagttcaaggcg 352
||||| |||||||| || || ||||| || ||||| || |||| ||||||||||||||
Sbjct: 646 cagccaacgcagtatccaacatcagaggaattgagtataggcaaaatcaagttcaaggct 587
Query: 353 ttcgaccttgggggccaccagatcgcccgccgcgtctggaaggactactacgccaaggtt 412
|| || | || ||||| ||||| ||||| || || ||||| || ||||| ||||||||
Sbjct: 586 tttgatttgggtggccatcagattgcccgtcgagtttggaaagattactatgccaaggtg 527
Query: 413 gatgctgttgtgtacttggtggatgct 439
||||||||||| ||| |||| ||||||
Sbjct: 526 gatgctgttgtttacctggtagatgct 500
>gb|CX656671.1|CX656671 PO02022A01 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02022A01 5', mRNA sequence
Length = 570
Score = 81.8 bits (41), Expect = 6e-014
Identities = 161/201 (80%)
Strand = Plus / Plus
Query: 528 tgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcg 587
|||||||||||||||| |||||| | || || ||||| || ||| || | | |||||| |
Sbjct: 263 tgggcaacaagattgatatcccagatgctgcctcagaagatgagttgcgtttctacctgg 322
Query: 588 gcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggc 647
| || | ||||||||| ||||| |||||||| |||||||||| ||||| |||||||| |
Sbjct: 323 gtcttaccaacttcaccaccggcaagggcaaggtgaacttggtagactcaaatgtccgtc 382
Query: 648 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaat 707
|||| ||| | |||||||| | | || ||||| ||||||||||| || || |||| |
Sbjct: 383 ccctcgaggtgttcatgtgtaccattgtccgcaaaatgggctatggagagggtttcaggt 442
Query: 708 ggatgtctcagtacatcaagt 728
|| | |||||||| |||||||
Sbjct: 443 ggctttctcagtatatcaagt 463
Score = 73.8 bits (37), Expect = 1e-011
Identities = 124/153 (81%)
Strand = Plus / Plus
Query: 287 cagcaccagccgacgcagtaccccacgtcagaagagttgagcatcggcaggatcaagttc 346
||||| ||||| |||||||| || || ||||| || ||||| || |||| |||||||||
Sbjct: 22 cagcatcagccaacgcagtatccaacatcagaggaattgagtataggcaaaatcaagttc 81
Query: 347 aaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggactactacgcc 406
||||| || || | || ||||| ||||| ||||| || || ||||| || ||||| |||
Sbjct: 82 aaggcttttgatttgggtggccatcagattgcccgtcgagtttggaaagattactatgcc 141
Query: 407 aaggttgatgctgttgtgtacttggtggatgct 439
||||| ||||||||||| ||| |||| ||||||
Sbjct: 142 aaggtggatgctgttgtttacctggtagatgct 174
>gb|DT470274.1|DT470274 WS01920.C21_G04 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01920_G04 3', mRNA sequence
Length = 614
Score = 81.8 bits (41), Expect = 6e-014
Identities = 161/201 (80%)
Strand = Plus / Minus
Query: 528 tgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcg 587
|||||||||||||||| |||||| | || || ||||| || ||| || | | |||||| |
Sbjct: 454 tgggcaacaagattgatatcccagatgctgcctcagaagatgagttgcgtttctacctgg 395
Query: 588 gcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggc 647
| || | ||||||||| ||||| ||||| || |||||||||| ||||| |||||||| |
Sbjct: 394 gtcttaccaacttcaccaccggcaagggtaaggtgaacttggtagactcaaatgtccgtc 335
Query: 648 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaat 707
|||| ||| | |||||||| || | || ||||| ||||||||||| || || |||| |
Sbjct: 334 ccctcgaggtgttcatgtgtagcattgtccgcaaaatgggctatggagagggtttcaggt 275
Query: 708 ggatgtctcagtacatcaagt 728
|| | |||||||| |||||||
Sbjct: 274 ggctttctcagtatatcaagt 254
Score = 50.1 bits (25), Expect = 2e-004
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 371 cagatcgcccgccgcgtctggaaggactactacgccaaggttgatgctgttgtgtacttg 430
||||| ||||| || || ||||| || ||||| |||||||| ||||||||||| ||| ||
Sbjct: 611 cagattgcccgtcgagtttggaaagattactatgccaaggtggatgctgttgtttacctg 552
Query: 431 gtggatgct 439
|| ||||||
Sbjct: 551 gtagatgct 543
>gb|BU871834.1|BU871834 Q035A12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 660
Score = 79.8 bits (40), Expect = 2e-013
Identities = 187/236 (79%)
Strand = Plus / Plus
Query: 338 atcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggac 397
|||||||||||||| || || || || || ||||| || ||||| || || ||||||||
Sbjct: 186 atcaagttcaaggcttttgatctgggaggtcaccaaattgcccgtcgtgtttggaaggat 245
Query: 398 tactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaaggaacgtttt 457
|||||||||||||| ||||| || || ||| | |||||||| ||||||||| | |||
Sbjct: 246 tactacgccaaggtggatgcggtggtatacctagtggatgccaatgacaaggagaggttt 305
Query: 458 gccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgcaaacgttcct 517
|| ||||| |||||||| || ||||| || ||| ||||||| ||| | || | |||||
Sbjct: 306 gctgagtcaaagaaggaactggatgccctcctttcagatgaatccttggcgactgttcca 365
Query: 518 ttcctcatactgggcaacaagattgacatcccatacgcggcttcagaggaggagct 573
|| || || | ||||||||||||||||| || || || |||||||| || |||||
Sbjct: 366 tttctgatcttaggcaacaagattgacattccctatgcagcttcagaagatgagct 421
Score = 75.8 bits (38), Expect = 4e-012
Identities = 83/97 (85%), Gaps = 2/97 (2%)
Strand = Plus / Plus
Query: 632 gactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggctat 691
|||||||||||||| || || ||| |||||||||||| | || ||||||||||| |||
Sbjct: 480 gactccaatgtccgtcctctcgag--gttcatgtgcagtattgtccgcaagatgggatat 537
Query: 692 ggcgaaggcttcaaatggatgtctcagtacatcaagt 728
|| || |||||||| ||||||||||| ||||||||||
Sbjct: 538 ggtgatggcttcaagtggatgtctcaatacatcaagt 574
>gb|CV232524.1|CV232524 WS0197.B21_N22 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0197_N22 3', mRNA sequence
Length = 707
Score = 79.8 bits (40), Expect = 2e-013
Identities = 187/236 (79%)
Strand = Plus / Minus
Query: 338 atcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggac 397
|||||||||||||| || || | || |||||||||||||| || || || ||||| ||
Sbjct: 594 atcaagttcaaggcttttgatttgggcggccaccagatcgctcgtcgtgtttggaaagat 535
Query: 398 tactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaaggaacgtttt 457
||||| || ||||| || || || || ||| | |||||||| |||||||||| | |||
Sbjct: 534 tactatgctaaggtggacgccgtggtttacctagtggatgcctttgacaaggagaggttt 475
Query: 458 gccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgcaaacgttcct 517
|||||||| |||||||| || ||||| || || ||||||| ||| | || || |||||
Sbjct: 474 gccgagtcaaagaaggaactggatgccctcctatcagatgaatccttggctaatgttcca 415
Query: 518 ttcctcatactgggcaacaagattgacatcccatacgcggcttcagaggaggagct 573
|| || || || ||||||||||||||||| || || || |||||||| || |||||
Sbjct: 414 tttctgattctaggcaacaagattgacattccctatgctgcttcagaagatgagct 359
Score = 65.9 bits (33), Expect = 3e-009
Identities = 81/97 (83%)
Strand = Plus / Minus
Query: 632 gactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggctat 691
|||||||||||||| || || ||| | |||||||| ||| | || ||||||||||| ||
Sbjct: 300 gactccaatgtccgtcctcttgaggttttcatgtgtagtattgtccgcaagatgggatac 241
Query: 692 ggcgaaggcttcaaatggatgtctcagtacatcaagt 728
|| || |||||||| ||||||||||| || |||||||
Sbjct: 240 ggtgatggcttcaagtggatgtctcaatatatcaagt 204
>gb|CX184195.1|CX184195 A10_45-42_02.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 590
Score = 79.8 bits (40), Expect = 2e-013
Identities = 187/236 (79%)
Strand = Plus / Plus
Query: 338 atcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggac 397
|||||||||||||| || || || || || ||||| |||||||| || || ||||||||
Sbjct: 321 atcaagttcaaggcttttgatctgggtggtcaccaaatcgcccgtcgtgtttggaaggat 380
Query: 398 tactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaaggaacgtttt 457
|||||||||||||| ||||| || || ||| | |||||||| ||||||| | |||
Sbjct: 381 tactacgccaaggtggatgcggtggtatacctagtggatgcctacgacaaggttaggttt 440
Query: 458 gccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgcaaacgttcct 517
|| ||||| |||||||| || ||||| || ||| ||||||| ||| | || || |||||
Sbjct: 441 gctgagtcaaagaaggaactggatgccctcctttcagatgaatccttggctaatgttcca 500
Query: 518 ttcctcatactgggcaacaagattgacatcccatacgcggcttcagaggaggagct 573
|| || || | ||||||||||||||||| || || || |||||||| || |||||
Sbjct: 501 tttctgatcttaggcaacaagattgacattccctatgcagcttcagaagatgagct 556
>gb|CX658954.1|CX658954 PO01024F01 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01024F01 5', mRNA sequence
Length = 542
Score = 79.8 bits (40), Expect = 2e-013
Identities = 187/236 (79%)
Strand = Plus / Plus
Query: 338 atcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggac 397
|||||||||||||| || || | || |||||||||||||| || || || ||||| ||
Sbjct: 134 atcaagttcaaggcttttgatttgggcggccaccagatcgctcgtcgtgtttggaaagat 193
Query: 398 tactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaaggaacgtttt 457
||||| || ||||| || || || || ||| | |||||||| |||||||||| | |||
Sbjct: 194 tactatgctaaggtggacgccgtggtttacctagtggatgcctttgacaaggagaggttt 253
Query: 458 gccgagtcgaagaaggagctcgatgcgcttcttgcagatgactcccttgcaaacgttcct 517
|||||||| |||||||| || ||||| || || ||||||| ||| | || || |||||
Sbjct: 254 gccgagtcaaagaaggaactggatgccctcctatcagatgaatccttggctaatgttcca 313
Query: 518 ttcctcatactgggcaacaagattgacatcccatacgcggcttcagaggaggagct 573
|| || || || ||||||||||||||||| || || || |||||||| || |||||
Sbjct: 314 tttctgattctaggcaacaagattgacattccctatgctgcttcagaagatgagct 369
Score = 73.8 bits (37), Expect = 1e-011
Identities = 82/97 (84%)
Strand = Plus / Plus
Query: 632 gactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggctat 691
|||||||||||||| || || ||| | |||||||||||| | || ||||||||||| ||
Sbjct: 428 gactccaatgtccgtcctcttgaggttttcatgtgcagtattgtccgcaagatgggatac 487
Query: 692 ggcgaaggcttcaaatggatgtctcagtacatcaagt 728
|| || |||||||| ||||||||||| || |||||||
Sbjct: 488 ggtgatggcttcaagtggatgtctcaatatatcaagt 524
>gb|CF233202.1|CF233202 PtaJXO0020E1E0109 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 733
Score = 77.8 bits (39), Expect = 9e-013
Identities = 290/374 (77%)
Strand = Plus / Plus
Query: 293 cagccgacgcagtaccccacgtcagaagagttgagcatcggcaggatcaagttcaaggcg 352
||||| || ||||| || |||||||| |||||||| || || | |||||||| |||||
Sbjct: 183 cagccaacacagtatccaacgtcagaggagttgagtatagggaacatcaagtttaaggct 242
Query: 353 ttcgaccttgggggccaccagatcgcccgccgcgtctggaaggactactacgccaaggtt 412
|| || | |||||||| ||||| || || || || ||||| || ||||| ||||||||
Sbjct: 243 tttgatttggggggccatcagattgctcgtcgagtttggaaagattactatgccaaggtg 302
Query: 413 gatgctgttgtgtacttggtggatgctgttgacaaggaacgttttgccgagtcgaagaag 472
|| || ||||| |||||||| ||||| |||||| || | ||||| ||||| || ||
Sbjct: 303 gacgcagttgtttacttggtagatgcctatgacaaagagagatttgcagagtcaaaacag 362
Query: 473 gagctcgatgcgcttcttgcagatgactcccttgcaaacgttcctttcctcatactgggc 532
|| || ||||| || || ||||| || | | || ||||| ||||||||| | | |||
Sbjct: 363 gaactagatgctctcctcgcagacgaagcattagccaacgtccctttcctcgttttaggc 422
Query: 533 aacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcggcctg 592
|||| ||| || || |||||||| |||||||| || ||| || | |||||||| |||||
Sbjct: 423 aacangatcgatattccatacgctgcttcagaagaagagttgcgatactaccttggcctt 482
Query: 593 agcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggcccctg 652
||||||||| || || ||||| || |||||||||| ||||| |||||||| || ||
Sbjct: 483 gccaacttcaccactggcaagggtaaggtgaacttggaagactcaaatgtccgtccgctc 542
Query: 653 gagatcttcatgtg 666
||| ||||||||||
Sbjct: 543 gaggtcttcatgtg 556
Score = 44.1 bits (22), Expect = 0.013
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 164 tggttctatggggtgctggcatcgcttgggctgtggcagaaggaggctaagatc 217
||||| ||||||||||| ||||| ||||| | ||||||||||| || ||||||
Sbjct: 54 tggttttatggggtgctagcatcacttggcttatggcagaaggaagccaagatc 107
>gb|AI164210.1|AI164210 A057P38U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 321
Score = 75.8 bits (38), Expect = 4e-012
Identities = 82/97 (84%)
Strand = Plus / Plus
Query: 632 gactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggctat 691
|||||||||||||| || || ||| | |||||||||||| | || ||||||||||| ||
Sbjct: 164 gactccaatgtccgtcctcttgaggttttcatgtgcagtattgtccgcaagatgggatac 223
Query: 692 ggcgaaggcttcaaatggatgtctcagtacatcaagt 728
|| || |||||||| ||||||||||| || |||||||
Sbjct: 224 ggngatggcttcaagtggatgtctcaatatatcaagt 260
>gb|BU102295.1|BU102295 mep119 Poplar developing cambium Populus trichocarpa x Populus
deltoides cDNA similar to GTP-BINDING PROTEIN SAR1A,
mRNA sequence
Length = 317
Score = 75.8 bits (38), Expect = 4e-012
Identities = 134/166 (80%)
Strand = Plus / Minus
Query: 528 tgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcg 587
|||||||||||||||| |||||||| || || || || || ||| || | ||| |||| |
Sbjct: 307 tgggcaacaagattgatatcccatatgctgcctcggaagatgagttgcgttacaacctgg 248
Query: 588 gcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggc 647
| || | ||||||||| || || ||||| || |||||||||| |||||| |||||||| |
Sbjct: 247 gtctcaccaacttcaccactggcaagggtaaggtgaacttggtcgactcaaatgtccgtc 188
Query: 648 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatgg 693
|||| ||| | |||||||| || | || ||||| |||||||||||
Sbjct: 187 cccttgaggtattcatgtgtagcattgtccgcaaaatgggctatgg 142
>gb|CF233198.1|CF233198 PtaJXO0020D9D0907 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 672
Score = 75.8 bits (38), Expect = 4e-012
Identities = 134/166 (80%)
Strand = Plus / Plus
Query: 528 tgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcg 587
|||||||||||||||| |||||||| || || ||||| || ||| || | ||| |||| |
Sbjct: 376 tgggcaacaagattgatatcccatatgctgcctcagaagatgagttgcgttacaacctgg 435
Query: 588 gcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggc 647
| || | ||||||||| || || ||||| || || ||||||| |||||| |||||||| |
Sbjct: 436 gtctcaccaacttcaccactggcaagggtaaggtaaacttggtcgactcaaatgtccgtc 495
Query: 648 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatgg 693
|||| ||| | |||||||| || | || ||||| |||||||||||
Sbjct: 496 cccttgaggtattcatgtgtagcattgtccgcaaaatgggctatgg 541
Score = 50.1 bits (25), Expect = 2e-004
Identities = 94/117 (80%)
Strand = Plus / Plus
Query: 323 ttgagcatcggcaggatcaagttcaaggcgttcgaccttgggggccaccagatcgcccgc 382
|||||||| |||| |||||||||||||| || || | || || || ||||| || ||
Sbjct: 171 ttgagcattggcaaaatcaagttcaaggcttttgatttgggtggacatcagattgctcgt 230
Query: 383 cgcgtctggaaggactactacgccaaggttgatgctgttgtgtacttggtggatgct 439
|| || ||||| || ||||| |||||||| ||||||||| | ||| |||||||||||
Sbjct: 231 cgagtttggaaagattactatgccaaggtggatgctgttatttacctggtggatgct 287
>gb|CK318683.1|CK318683 X9P02c03 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 747
Score = 75.8 bits (38), Expect = 4e-012
Identities = 160/201 (79%)
Strand = Plus / Plus
Query: 528 tgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcg 587
|||||||||||||||| |||||| | || || ||||| || ||| || | | ||||||
Sbjct: 500 tgggcaacaagattgatatcccagatgctgcctcagaagatgagttgcgtttctacctgn 559
Query: 588 gcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggc 647
| || | ||||||||| ||||| ||||| || |||||||||| ||||| |||||||| |
Sbjct: 560 gtcttaccaacttcaccaccggcaagggtaaggtgaacttggtagactcaaatgtccgtc 619
Query: 648 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaat 707
|||| ||| | |||||||| || | || ||||| ||||||||||| || || |||| |
Sbjct: 620 ccctcgaggtgttcatgtgtagcattgtccgcaaaatgggctatggagagggtttcaggt 679
Query: 708 ggatgtctcagtacatcaagt 728
|| | |||||||| |||||||
Sbjct: 680 ggctttctcagtatatcaagt 700
Score = 71.9 bits (36), Expect = 6e-011
Identities = 216/276 (78%)
Strand = Plus / Plus
Query: 164 tggttctatggggtgctggcatcgcttgggctgtggcagaaggaggctaagatcctcttc 223
||||| ||||||||||| ||||| ||||| | ||||| || || ||||||||| | ||
Sbjct: 136 tggttttatggggtgctagcatcacttggtttatggcaaaaagaagctaagatcttgttt 195
Query: 224 cttggcctcgacaacgccggcaagaccaccctcctccacatgctgaaggacgagcggctc 283
| |||||||| || || ||||| ||||| | || |||||| | || |||||| | |
Sbjct: 196 ttaggcctcgataatgctggcaaaaccacattgcttcacatgttaaaagacgagagattg 255
Query: 284 gtacagcaccagccgacgcagtaccccacgtcagaagagttgagcatcggcaggatcaag 343
|| || || ||||| |||||||| || || ||||| || ||||| || |||| ||||||
Sbjct: 256 gtgcaacatcagccaacgcagtatccaacatcagaggaattgagtataggcaaaatcaag 315
Query: 344 ttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggactactac 403
|||||||| || || | || ||||| ||||| ||||| || || ||||| || |||||
Sbjct: 316 ttcaaggcttttgatttgggtggccatcagattgcccgtcgagtttggaaagattactat 375
Query: 404 gccaaggttgatgctgttgtgtacttggtggatgct 439
|||||||| ||||||||||| ||| |||| ||||||
Sbjct: 376 gccaaggtggatgctgttgtttacctggtagatgct 411
>gb|CX181170.1|CX181170 D11_45-56_07.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 644
Score = 75.8 bits (38), Expect = 4e-012
Identities = 134/166 (80%)
Strand = Plus / Plus
Query: 528 tgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcg 587
|||||||||||||||| |||||| | || || ||||| || ||| || | | |||||| |
Sbjct: 451 tgggcaacaagattgatatcccagatgctgcctcagaagatgagttgcgtttctacctgg 510
Query: 588 gcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggc 647
| || | ||||||||| ||||| ||||| || |||||||||| ||||| |||||||| |
Sbjct: 511 gtcttaccaacttcaccaccggcaagggtaaggtgaacttggtagactcaaatgtccgtc 570
Query: 648 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatgg 693
|||| ||| | |||||||| || | || ||||| |||||||||||
Sbjct: 571 ccctcgaggtgttcatgtgtagcattgtccgcaaaatgggctatgg 616
Score = 69.9 bits (35), Expect = 2e-010
Identities = 119/147 (80%)
Strand = Plus / Plus
Query: 293 cagccgacgcagtaccccacgtcagaagagttgagcatcggcaggatcaagttcaaggcg 352
||||| |||||||| || || ||||| || ||||| || |||| ||||||||||||||
Sbjct: 216 cagccaacgcagtatccaacatcagaggaattgagtataggcaaaatcaagttcaaggct 275
Query: 353 ttcgaccttgggggccaccagatcgcccgccgcgtctggaaggactactacgccaaggtt 412
|| || | || ||||| ||||| ||||| || || ||||| || ||||| ||||||||
Sbjct: 276 tttgatttgggtggccatcagattgcccgtcgagtttggaaagattactatgccaaggtg 335
Query: 413 gatgctgttgtgtacttggtggatgct 439
||||||||||| ||| |||| ||||||
Sbjct: 336 gatgctgttgtttacctggtagatgct 362
>gb|DT489899.1|DT489899 WS02543.B21_H21 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02543_H21 3', mRNA sequence
Length = 842
Score = 75.8 bits (38), Expect = 4e-012
Identities = 134/166 (80%)
Strand = Plus / Minus
Query: 528 tgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcg 587
|||||||||||||||| |||||||| || || || || || ||| || | ||| |||| |
Sbjct: 423 tgggcaacaagattgatatcccatatgctgcctcggaagatgagttgcgttacaacctgg 364
Query: 588 gcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggc 647
| || | ||||||||| || || ||||| || |||||||||| |||||| |||||||| |
Sbjct: 363 gtctcaccaacttcaccactggcaagggtaaggtgaacttggtcgactcaaatgtccgtc 304
Query: 648 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatgg 693
|||| ||| | |||||||| || | || ||||| |||||||||||
Sbjct: 303 cccttgaggtattcatgtgtagcattgtccgcaaaatgggctatgg 258
>gb|DT492529.1|DT492529 WS02551.C21_A09 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02551_A09 3', mRNA sequence
Length = 666
Score = 75.8 bits (38), Expect = 4e-012
Identities = 134/166 (80%)
Strand = Plus / Minus
Query: 528 tgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcg 587
|||||||||||||||| |||||||| || || || || || ||| || | ||| |||| |
Sbjct: 457 tgggcaacaagattgatatcccatatgctgcctcggaagatgagttgcgttacaacctgg 398
Query: 588 gcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggc 647
| || | ||||||||| || || ||||| || |||||||||| |||||| |||||||| |
Sbjct: 397 gtctcaccaacttcaccactggcaagggtaaggtgaacttggtcgactcaaatgtccgtc 338
Query: 648 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatgg 693
|||| ||| | |||||||| || | || ||||| |||||||||||
Sbjct: 337 cccttgaggtattcatgtgtagcattgtccgcaaaatgggctatgg 292
>gb|CF234133.1|CF234133 PtaJXO2H5H0515 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 646
Score = 73.8 bits (37), Expect = 1e-011
Identities = 130/161 (80%)
Strand = Plus / Plus
Query: 338 atcaagttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggac 397
|||||||||||||| || || || || || ||||| || ||||| || || ||||||||
Sbjct: 264 atcaagttcaaggcttttgatctgggaggtcaccaaattgcccgtcgtgtttggaaggat 323
Query: 398 tactacgccaaggttgatgctgttgtgtacttggtggatgctgttgacaaggaacgtttt 457
|||||||||||||| ||||| || || ||| | |||||||| ||||||||| | |||
Sbjct: 324 tactacgccaaggtggatgcggtggtatacctagtggatgccaatgacaaggagaggttt 383
Query: 458 gccgagtcgaagaaggagctcgatgcgcttcttgcagatga 498
|| ||||| |||||||| || ||||| || ||| |||||||
Sbjct: 384 gctgagtcaaagaaggaactggatgccctcctttcagatga 424
Score = 56.0 bits (28), Expect = 3e-006
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 632 gactccaatgtccggcccctggagatcttcatgtgcagtgtggtgcgcaagatgggctat 691
|||||||||||||| || || ||| | |||||||||| | | || ||||| ||||| |||
Sbjct: 558 gactccaatgtccgtcctctcgaggttttcatgtgcantattgtccgcaaaatgggatat 617
Query: 692 ggcgaaggcttcaaatggatgtctca 717
|| || |||| ||| |||||||||||
Sbjct: 618 ggtgatggctncaagtggatgtctca 643
>gb|AJ775121.1|AJ775121 AJ775121 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300028A11F1, mRNA sequence
Length = 446
Score = 73.8 bits (37), Expect = 1e-011
Identities = 238/305 (78%)
Strand = Plus / Plus
Query: 242 ggcaagaccaccctcctccacatgctgaaggacgagcggctcgtacagcaccagccgacg 301
|||||||| ||||| || |||||| |||| |||||| | | ||||| || ||||| ||
Sbjct: 129 ggcaagacaacccttcttcacatgttgaaagacgagagattagtacaacatcagccaacc 188
Query: 302 cagtaccccacgtcagaagagttgagcatcggcaggatcaagttcaaggcgttcgacctt 361
||| | || || ||||| || |||||||| || | |||||||||||||| || || |
Sbjct: 189 cagcatccaacatcagaggaattgagcattggaaaaatcaagttcaaggcttttgatttg 248
Query: 362 gggggccaccagatcgcccgccgcgtctggaaggactactacgccaaggttgatgctgtt 421
|| |||||||||||||| || || || ||||| || ||||| || ||||| || || ||
Sbjct: 249 ggcggccaccagatcgctcgtcgtgtttggaaagattactatgctaaggtggacgccgtg 308
Query: 422 gtgtacttggtggatgctgttgacaaggaacgttttgccgagtcgaagaaggagctcgat 481
|| ||| | |||||||| |||||||||| | ||||||||||| |||||||| || |||
Sbjct: 309 gtttacctagtggatgcctttgacaaggagaggtttgccgagtcaaagaaggaactggat 368
Query: 482 gcgcttcttgcagatgactcccttgcaaacgttcctttcctcatactgggcaacaagatt 541
|| || || ||||||| ||| | || || ||||| || || || || |||||||||||
Sbjct: 369 gccctcctatcagatgaatccttggctaatgttccatttctgattctaggcaacaagatc 428
Query: 542 gacat 546
|||||
Sbjct: 429 gacat 433
>gb|CV272415.1|CV272415 WS0157.B21_J15 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0157_J15 3', mRNA sequence
Length = 699
Score = 73.8 bits (37), Expect = 1e-011
Identities = 157/197 (79%)
Strand = Plus / Minus
Query: 528 tgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcg 587
||||||||||||| || || ||||| || || ||||| || ||| || ||||| |||| |
Sbjct: 338 tgggcaacaagatcgatattccatatgctgcctcagaagaagagttgcggtaccaccttg 279
Query: 588 gcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggc 647
|||| ||||||||| ||||| ||||| || |||||||||| ||||| ||||| || |
Sbjct: 278 gccttgtcaacttcaccaccggcaagggaaaggtgaacttgggagactcaaatgttcgtc 219
Query: 648 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaat 707
| || ||| |||||||||| || | || ||||||||||| || || ||||| |||| |
Sbjct: 218 cactcgaggtcttcatgtgtagcattgtccgcaagatgggttacggagaaggtttcaggt 159
Query: 708 ggatgtctcagtacatc 724
|| | ||||||||||||
Sbjct: 158 ggctttctcagtacatc 142
Score = 67.9 bits (34), Expect = 9e-010
Identities = 211/270 (78%)
Strand = Plus / Minus
Query: 170 tatggggtgctggcatcgcttgggctgtggcagaaggaggctaagatcctcttccttggc 229
||||||||||||||||| ||||| ||||||| || || || |||||| | ||| | |||
Sbjct: 696 tatggggtgctggcatcacttggtttgtggcaaaaagaagccaagatcttgttcttgggc 637
Query: 230 ctcgacaacgccggcaagaccaccctcctccacatgctgaaggacgagcggctcgtacag 289
|| || || || ||||| |||||| | || |||||| | || || ||| | | || ||
Sbjct: 636 cttgataatgctggcaaaaccaccttgcttcacatgttaaaagatgagagattagtgcaa 577
Query: 290 caccagccgacgcagtaccccacgtcagaagagttgagcatcggcaggatcaagttcaag 349
|||||||| || ||||| || || ||||| ||||||||||| || | ||||||||| |||
Sbjct: 576 caccagcctacacagtatccaacatcagaggagttgagcatagggaagatcaagtttaag 517
Query: 350 gcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggactactacgccaag 409
|| || || | || ||||| ||||| || || || || ||||| || ||||| ||||||
Sbjct: 516 gcttttgatttgggcggccatcagattgctcgtcgagtttggaaagattactatgccaag 457
Query: 410 gttgatgctgttgtgtacttggtggatgct 439
|| ||||| ||||| ||| |||| ||||||
Sbjct: 456 gtggatgcagttgtttacctggtagatgct 427
>gb|CV282722.1|CV282722 WS0185.B21_G19 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0185_G19 3', mRNA sequence
Length = 785
Score = 73.8 bits (37), Expect = 1e-011
Identities = 157/197 (79%)
Strand = Plus / Minus
Query: 528 tgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcg 587
||||||||||||| || || ||||| || || ||||| || ||| || ||||| |||| |
Sbjct: 347 tgggcaacaagatcgatattccatatgctgcctcagaagaagagttgcggtaccaccttg 288
Query: 588 gcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggc 647
|||| ||||||||| ||||| ||||| || |||||||||| ||||| ||||| || |
Sbjct: 287 gccttgtcaacttcaccaccggcaagggaaaggtgaacttgggagactcaaatgttcgtc 228
Query: 648 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaat 707
| || ||| |||||||||| || | || ||||||||||| || || ||||| |||| |
Sbjct: 227 cactcgaggtcttcatgtgtagcattgtccgcaagatgggttacggagaaggtttcaggt 168
Query: 708 ggatgtctcagtacatc 724
|| | ||||||||||||
Sbjct: 167 ggctttctcagtacatc 151
Score = 61.9 bits (31), Expect = 5e-008
Identities = 214/275 (77%)
Strand = Plus / Minus
Query: 164 tggttctatggggtgctggcatcgcttgggctgtggcagaaggaggctaagatcctcttc 223
||||| ||||||||||||||||| ||||| ||||||| || || || |||||| | |||
Sbjct: 711 tggttttatggggtgctggcatcacttggtttgtggcaaaaagaagccaagatcttgttc 652
Query: 224 cttggcctcgacaacgccggcaagaccaccctcctccacatgctgaaggacgagcggctc 283
| ||||| || || || ||||| |||||| | || || ||| | || || ||| | |
Sbjct: 651 ttgggccttgataatgctggcaaaaccaccttgcttcatatgttaaaagatgagagatta 592
Query: 284 gtacagcaccagccgacgcagtaccccacgtcagaagagttgagcatcggcaggatcaag 343
|| || |||||||| || ||||| || || ||||| ||||||||||| || | |||||||
Sbjct: 591 gtgcaacaccagcctacacagtatccaacatcagaggagttgagcatagggaagatcaag 532
Query: 344 ttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggactactac 403
|| ||||| || || | || ||||| ||||| || || || || ||||| || |||||
Sbjct: 531 tttaaggcttttgatttgggcggccatcagattgctcgtcgagtttggaaagattactat 472
Query: 404 gccaaggttgatgctgttgtgtacttggtggatgc 438
|||||||| ||||| ||||| ||| |||| |||||
Sbjct: 471 gccaaggtggatgcagttgtttacctggtagatgc 437
>gb|DT501261.1|DT501261 WS01312.BR_B22 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01312_B22 5', mRNA sequence
Length = 724
Score = 73.8 bits (37), Expect = 1e-011
Identities = 157/197 (79%)
Strand = Plus / Plus
Query: 528 tgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcg 587
||||||||||||| || || ||||| || || ||||| || ||| || ||||| |||| |
Sbjct: 505 tgggcaacaagatcgatattccatatgctgcctcagaagaagagttgcggtaccaccttg 564
Query: 588 gcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggc 647
|||| ||||||||| ||||| ||||| || |||||||||| ||||| ||||| || |
Sbjct: 565 gccttgtcaacttcaccaccggcaagggaaaggtgaacttgggagactcaaatgttcgtc 624
Query: 648 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaat 707
| || ||| |||||||||| || | || ||||||||||| || || ||||| |||| |
Sbjct: 625 cactcgaggtcttcatgtgtagcattgtccgcaagatgggttacggagaaggtttcaggt 684
Query: 708 ggatgtctcagtacatc 724
|| | ||||||||||||
Sbjct: 685 ggctttctcagtacatc 701
Score = 61.9 bits (31), Expect = 5e-008
Identities = 214/275 (77%)
Strand = Plus / Plus
Query: 164 tggttctatggggtgctggcatcgcttgggctgtggcagaaggaggctaagatcctcttc 223
||||| ||||||||||||||||| ||||| ||||||| || || || |||||| | |||
Sbjct: 141 tggttttatggggtgctggcatcacttggtttgtggcaaaaagaagccaagatcttgttc 200
Query: 224 cttggcctcgacaacgccggcaagaccaccctcctccacatgctgaaggacgagcggctc 283
| ||||| || || || ||||| |||||| | || || ||| | || || ||| | |
Sbjct: 201 ttgggccttgataatgctggcaaaaccaccttgcttcatatgttaaaagatgagagatta 260
Query: 284 gtacagcaccagccgacgcagtaccccacgtcagaagagttgagcatcggcaggatcaag 343
|| || |||||||| || ||||| || || ||||| ||||||||||| || | |||||||
Sbjct: 261 gtgcaacaccagcctacacagtatccaacatcagaggagttgagcatagggaagatcaag 320
Query: 344 ttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggactactac 403
|| ||||| || || | || ||||| ||||| || || || || ||||| || |||||
Sbjct: 321 tttaaggcttttgatttgggcggccatcagattgctcgtcgagtttggaaagattactat 380
Query: 404 gccaaggttgatgctgttgtgtacttggtggatgc 438
|||||||| ||||| ||||| ||| |||| |||||
Sbjct: 381 gccaaggtggatgcagttgtttacctggtagatgc 415
>gb|DT504127.1|DT504127 WS01312.B21_B22 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01312_B22 3', mRNA sequence
Length = 872
Score = 73.8 bits (37), Expect = 1e-011
Identities = 157/197 (79%)
Strand = Plus / Minus
Query: 528 tgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcg 587
||||||||||||| || || ||||| || || ||||| || ||| || ||||| |||| |
Sbjct: 368 tgggcaacaagatcgatattccatatgctgcctcagaagaagagttgcggtaccaccttg 309
Query: 588 gcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggc 647
|||| ||||||||| ||||| ||||| || |||||||||| ||||| ||||| || |
Sbjct: 308 gccttgtcaacttcaccaccggcaagggaaaggtgaacttgggagactcaaatgttcgtc 249
Query: 648 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaat 707
| || ||| |||||||||| || | || ||||||||||| || || ||||| |||| |
Sbjct: 248 cactcgaggtcttcatgtgtagcattgtccgcaagatgggttacggagaaggtttcaggt 189
Query: 708 ggatgtctcagtacatc 724
|| | ||||||||||||
Sbjct: 188 ggctttctcagtacatc 172
Score = 61.9 bits (31), Expect = 5e-008
Identities = 214/275 (77%)
Strand = Plus / Minus
Query: 164 tggttctatggggtgctggcatcgcttgggctgtggcagaaggaggctaagatcctcttc 223
||||| ||||||||||||||||| ||||| ||||||| || || || |||||| | |||
Sbjct: 732 tggttttatggggtgctggcatcacttggtttgtggcaaaaagaagccaagatcttgttc 673
Query: 224 cttggcctcgacaacgccggcaagaccaccctcctccacatgctgaaggacgagcggctc 283
| ||||| || || || ||||| |||||| | || || ||| | || || ||| | |
Sbjct: 672 ttgggccttgataatgctggcaaaaccaccttgcttcatatgttaaaagatgagagatta 613
Query: 284 gtacagcaccagccgacgcagtaccccacgtcagaagagttgagcatcggcaggatcaag 343
|| || |||||||| || ||||| || || ||||| ||||||||||| || | |||||||
Sbjct: 612 gtgcaacaccagcctacacagtatccaacatcagaggagttgagcatagggaagatcaag 553
Query: 344 ttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggactactac 403
|| ||||| || || | || ||||| ||||| || || || || ||||| || |||||
Sbjct: 552 tttaaggcttttgatttgggcggccatcagattgctcgtcgagtttggaaagattactat 493
Query: 404 gccaaggttgatgctgttgtgtacttggtggatgc 438
|||||||| ||||| ||||| ||| |||| |||||
Sbjct: 492 gccaaggtggatgcagttgtttacctggtagatgc 458
>gb|DT516435.1|DT516435 WS02431.B21_G04 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02431_G04 3', mRNA sequence
Length = 833
Score = 73.8 bits (37), Expect = 1e-011
Identities = 157/197 (79%)
Strand = Plus / Minus
Query: 528 tgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcg 587
||||||||||||| || || ||||| || || ||||| || ||| || ||||| |||| |
Sbjct: 368 tgggcaacaagatcgatattccatatgctgcctcagaagaagagttgcggtaccaccttg 309
Query: 588 gcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggc 647
|||| ||||||||| ||||| ||||| || |||||||||| ||||| ||||| || |
Sbjct: 308 gccttgtcaacttcaccaccggcaagggaaaggtgaacttgggagactcaaatgttcgtc 249
Query: 648 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaat 707
| || ||| |||||||||| || | || ||||||||||| || || ||||| |||| |
Sbjct: 248 cactcgaggtcttcatgtgtagcattgtccgcaagatgggttacggagaaggtttcaggt 189
Query: 708 ggatgtctcagtacatc 724
|| | ||||||||||||
Sbjct: 188 ggctttctcagtacatc 172
Score = 63.9 bits (32), Expect = 1e-008
Identities = 215/276 (77%)
Strand = Plus / Minus
Query: 164 tggttctatggggtgctggcatcgcttgggctgtggcagaaggaggctaagatcctcttc 223
||||| ||||||||||||||||| ||||| ||||||| || || || |||||| | |||
Sbjct: 732 tggttttatggggtgctggcatcacttggtttgtggcaaaaagaagccaagatcttgttc 673
Query: 224 cttggcctcgacaacgccggcaagaccaccctcctccacatgctgaaggacgagcggctc 283
| ||||| || || || ||||| |||||| | || || ||| | || || ||| | |
Sbjct: 672 ttgggccttgataatgctggcaaaaccaccttgcttcatatgttaaaagatgagagatta 613
Query: 284 gtacagcaccagccgacgcagtaccccacgtcagaagagttgagcatcggcaggatcaag 343
|| || |||||||| || ||||| || || ||||| ||||||||||| || | |||||||
Sbjct: 612 gtgcaacaccagcctacacagtatccaacatcagaggagttgagcatagggaagatcaag 553
Query: 344 ttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggactactac 403
|| ||||| || || | || ||||| ||||| || || || || ||||| || |||||
Sbjct: 552 tttaaggcttttgatttgggcggccatcagattgctcgtcgagtttggaaagattactat 493
Query: 404 gccaaggttgatgctgttgtgtacttggtggatgct 439
|||||||| ||||| ||||| ||| |||| ||||||
Sbjct: 492 gccaaggtggatgcagttgtttacctggtagatgct 457
>gb|CV256200.1|CV256200 WS0243.B21_D08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0243_D08 3', mRNA sequence
Length = 842
Score = 71.9 bits (36), Expect = 6e-011
Identities = 216/276 (78%)
Strand = Plus / Minus
Query: 164 tggttctatggggtgctggcatcgcttgggctgtggcagaaggaggctaagatcctcttc 223
||||| ||||||||||||||||| ||||| ||||||| || || || |||||| | |||
Sbjct: 727 tggttttatggggtgctggcatcacttggtttgtggcaaaaagaagccaagatcttgttc 668
Query: 224 cttggcctcgacaacgccggcaagaccaccctcctccacatgctgaaggacgagcggctc 283
| ||||| || || || ||||| |||||| | || |||||| | || || ||| | |
Sbjct: 667 ttgggccttgataatgctggcaaaaccaccttgcttcacatgttaaaagatgagagatta 608
Query: 284 gtacagcaccagccgacgcagtaccccacgtcagaagagttgagcatcggcaggatcaag 343
|| || |||||||| || ||||| || || ||||| ||||||||||| || | |||||||
Sbjct: 607 gtgcaacaccagcctacacagtatccaacatcagaggagttgagcatagggaagatcaag 548
Query: 344 ttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggactactac 403
|| ||||| || || | || ||||| ||||| || || || || ||||| || |||||
Sbjct: 547 tttaaggcttttgatttgggcggccatcagattgctcgtcgagtttggaaagattactat 488
Query: 404 gccaaggttgatgctgttgtgtacttggtggatgct 439
|||||||| ||||| ||||| ||| |||| ||||||
Sbjct: 487 gccaaggtggatgcagttgtttacctggtagatgct 452
Score = 65.9 bits (33), Expect = 3e-009
Identities = 156/197 (79%)
Strand = Plus / Minus
Query: 528 tgggcaacaagattgacatcccatacgcggcttcagaggaggagctgaggtactacctcg 587
||||||||||||| || || ||||| || || ||||| || ||| || ||||| |||| |
Sbjct: 363 tgggcaacaagatcgatattccatatgctgcctcagaagaagagttgcggtaccaccttg 304
Query: 588 gcctgagcaacttcacaaccgggaagggcaacgtgaacttggccgactccaatgtccggc 647
|||| ||||||||| ||||| ||||| || |||||||||| ||||| ||||| || |
Sbjct: 303 gccttgtcaacttcaccaccggcaagggaaaggtgaacttgggagactcaaatgttcgtc 244
Query: 648 ccctggagatcttcatgtgcagtgtggtgcgcaagatgggctatggcgaaggcttcaaat 707
| || ||| |||||||||| || | || ||||||||||| || || || || |||| |
Sbjct: 243 cactcgaggtcttcatgtgtagcattgtccgcaagatgggttacggagagggtttcaggt 184
Query: 708 ggatgtctcagtacatc 724
|| | ||||||||||||
Sbjct: 183 ggctttctcagtacatc 167
>gb|CX172129.1|CX172129 E01_69-71_09.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 596
Score = 71.9 bits (36), Expect = 6e-011
Identities = 216/276 (78%)
Strand = Plus / Plus
Query: 164 tggttctatggggtgctggcatcgcttgggctgtggcagaaggaggctaagatcctcttc 223
||||| ||||||||||| ||||| ||||| | ||||| || || ||||||||| | ||
Sbjct: 119 tggttttatggggtgctagcatcacttggtttatggcaaaaagaagctaagatcttgttt 178
Query: 224 cttggcctcgacaacgccggcaagaccaccctcctccacatgctgaaggacgagcggctc 283
| |||||||| || || ||||| ||||| | || |||||| | || |||||| | |
Sbjct: 179 ttaggcctcgataatgctggcaaaaccacattgcttcacatgttaaaagacgagagattg 238
Query: 284 gtacagcaccagccgacgcagtaccccacgtcagaagagttgagcatcggcaggatcaag 343
|| || || ||||| |||||||| || || ||||| || ||||| || |||| ||||||
Sbjct: 239 gtgcaacatcagccaacgcagtatccaacatcagaggaattgagtataggcaaaatcaag 298
Query: 344 ttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggactactac 403
|||||||| || || | || ||||| ||||| ||||| || || ||||| || |||||
Sbjct: 299 ttcaaggcttttgatttgggtggccatcagattgcccgtcgagtttggaaagattactat 358
Query: 404 gccaaggttgatgctgttgtgtacttggtggatgct 439
|||||||| ||||||||||| ||| |||| ||||||
Sbjct: 359 gccaaggtggatgctgttgtttacctggtagatgct 394
>gb|CX173825.1|CX173825 C03_69-85_05.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 617
Score = 71.9 bits (36), Expect = 6e-011
Identities = 216/276 (78%)
Strand = Plus / Plus
Query: 164 tggttctatggggtgctggcatcgcttgggctgtggcagaaggaggctaagatcctcttc 223
||||| ||||||||||| ||||| ||||| | ||||| || || ||||||||| | ||
Sbjct: 135 tggttttatggggtgctagcatcacttggtttatggcaaaaagaagctaagatcttgttt 194
Query: 224 cttggcctcgacaacgccggcaagaccaccctcctccacatgctgaaggacgagcggctc 283
| |||||||| || || ||||| ||||| | || |||||| | || |||||| | |
Sbjct: 195 ttaggcctcgataatgctggcaaaaccacattgcttcacatgttaaaagacgagagattg 254
Query: 284 gtacagcaccagccgacgcagtaccccacgtcagaagagttgagcatcggcaggatcaag 343
|| || || ||||| |||||||| || || ||||| || ||||| || |||| ||||||
Sbjct: 255 gtgcaacatcagccaacgcagtatccaacatcagaggaattgagtataggcaaaatcaag 314
Query: 344 ttcaaggcgttcgaccttgggggccaccagatcgcccgccgcgtctggaaggactactac 403
|||||||| || || | || ||||| ||||| ||||| || || ||||| || |||||
Sbjct: 315 ttcaaggcttttgatttgggtggccatcagattgcccgtcgagtttggaaagattactat 374
Query: 404 gccaaggttgatgctgttgtgtacttggtggatgct 439
|||||||| ||||||||||| ||| |||| ||||||
Sbjct: 375 gccaaggtggatgctgttgtttacctggtagatgct 410
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 148,878
Number of Sequences: 369679
Number of extensions: 148878
Number of successful extensions: 43578
Number of sequences better than 0.5: 183
Number of HSP's better than 0.5 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42858
Number of HSP's gapped (non-prelim): 478
length of query: 1231
length of database: 203,408,664
effective HSP length: 19
effective length of query: 1212
effective length of database: 196,384,763
effective search space: 238018332756
effective search space used: 238018332756
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)