BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2542097.2.1
(887 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AI165500.1|AI165500 A084p05u Hybrid aspen plasmid librar... 68 6e-010
gb|BU825619.1|BU825619 UK111TA09 Populus apical shoot cDNA ... 68 6e-010
gb|BU827774.1|BU827774 K008P72P Populus apical shoot cDNA l... 68 6e-010
gb|CK109268.1|CK109268 K056P45 Populus apical shoot cDNA li... 68 6e-010
gb|CK110521.1|CK110521 N067F03 Populus bark cDNA library Po... 68 6e-010
gb|CK117459.1|CK117459 B051P38 Hybrid aspen plasmid library... 68 6e-010
gb|CN522054.1|CN522054 GQ0122.B3_A02 GQ012 Populus trichoca... 68 6e-010
gb|CN522570.1|CN522570 GQ0121.B3_H07 GQ012 Populus trichoca... 68 6e-010
gb|CV249648.1|CV249648 WS01124.B21_N24 PT-P-FL-A-2 Populus ... 68 6e-010
gb|CV257492.1|CV257492 WS0246.B21_N03 PTxD-ICC-N-A-14 Popul... 68 6e-010
gb|CV271342.1|CV271342 WS0154.B21_H02 PTxN-IB-A-6 Populus t... 68 6e-010
gb|DT472058.1|DT472058 WS0122.BR_P10 PT-GT-FL-A-3 Populus t... 68 6e-010
gb|DT473778.1|DT473778 WS0123.BR_L09 PT-GT-FL-A-3 Populus t... 68 6e-010
gb|DT474779.1|DT474779 WS0124.BR_P12 PT-GT-FL-A-3 Populus t... 68 6e-010
gb|DT496898.1|DT496898 WS01124.BR_N24 PT-P-FL-A-2 Populus t... 68 6e-010
gb|DT509938.1|DT509938 WS02425.BR_C11 PTxD-ICC-N-A-14 Popul... 68 6e-010
gb|DT514559.1|DT514559 WS02425.B21_C11 PTxD-ICC-N-A-14 Popu... 68 6e-010
gb|AI165733.1|AI165733 A089p75u Hybrid aspen plasmid librar... 60 2e-007
gb|CK095382.1|CK095382 I081P88.3pR Populus senescing leaves... 56 2e-006
gb|CK105294.1|CK105294 I081P88.5pR Populus senescing leaves... 56 2e-006
gb|CF231041.1|CF231041 PtaC0016F1F0111 Poplar cDNA library ... 52 4e-005
gb|CV237683.1|CV237683 WS0123.B21_L09 PT-GT-FL-A-3 Populus ... 52 4e-005
gb|CV238011.1|CV238011 WS0124.B21_P12 PT-GT-FL-A-3 Populus ... 52 4e-005
gb|BU834022.1|BU834022 T055F05 Populus apical shoot cDNA li... 50 1e-004
gb|CK091100.1|CK091100 F048P87.3pR Populus flower cDNA libr... 48 6e-004
gb|CV238303.1|CV238303 WS0126.B21_B11 PT-GT-FL-A-3 Populus ... 48 6e-004
gb|CV246234.1|CV246234 WS0111.B21_L14 PT-P-FL-A-2 Populus t... 48 6e-004
gb|CV247051.1|CV247051 WS01116.B21_N15 PT-P-FL-A-2 Populus ... 48 6e-004
gb|CV260031.1|CV260031 WS02012.B21_P09 PTxN-IB-N-A-11 Popul... 48 6e-004
gb|DT475123.1|DT475123 WS0126.BR_B11 PT-GT-FL-A-3 Populus t... 48 6e-004
gb|DT493558.1|DT493558 WS0111.BR_L14 PT-P-FL-A-2 Populus tr... 48 6e-004
gb|DT493914.1|DT493914 WS01116.BR_N15 PT-P-FL-A-2 Populus t... 48 6e-004
gb|DT506811.1|DT506811 WS02416.BR_J07 PTxD-ICC-N-A-14 Popul... 48 6e-004
gb|DT508938.1|DT508938 WS02422.BR_F13 PTxD-ICC-N-A-14 Popul... 48 6e-004
gb|DT511479.1|DT511479 WS02416.B21_J07 PTxD-ICC-N-A-14 Popu... 48 6e-004
gb|DT513546.1|DT513546 WS02422.B21_F13 PTxD-ICC-N-A-14 Popu... 48 6e-004
gb|DT524917.1|DT524917 WS02043.C21_P01 PTxN-IB-N-A-11 Popul... 48 6e-004
gb|AJ772123.1|AJ772123 AJ772123 Populus euphratica shoot in... 46 0.002
gb|AJ774619.1|AJ774619 AJ774619 Populus euphratica shoot 3-... 46 0.002
gb|AJ774981.1|AJ774981 AJ774981 Populus euphratica shoot 3-... 46 0.002
gb|CV234180.1|CV234180 WS01213.B21_O20 PT-GT-FL-A-3 Populus... 46 0.002
gb|CV234640.1|CV234640 WS01215.B21.1_K19 PT-GT-FL-A-3 Popul... 46 0.002
gb|CV247122.1|CV247122 WS01117.B21_B14 PT-P-FL-A-2 Populus ... 46 0.002
gb|CV248239.1|CV248239 WS0112.B21_P02 PT-P-FL-A-2 Populus t... 46 0.002
gb|CV251360.1|CV251360 WS0116.B21_L21 PT-P-FL-A-2 Populus t... 46 0.002
gb|CV251543.1|CV251543 WS0117.B21_G21 PT-P-FL-A-2 Populus t... 46 0.002
gb|CV271052.1|CV271052 WS0153.B21_K15 PTxN-IB-A-6 Populus t... 46 0.002
gb|DT470702.1|DT470702 WS01210.BR_G04 PT-GT-FL-A-3 Populus ... 46 0.002
gb|DT473569.1|DT473569 WS0123.BR_A20 PT-GT-FL-A-3 Populus t... 46 0.002
gb|DT473884.1|DT473884 WS01230.BR_A15 PT-GT-FL-A-3 Populus ... 46 0.002
gb|DT476561.1|DT476561 WS01230.B21_A15 PT-GT-FL-A-3 Populus... 46 0.002
gb|DT493891.1|DT493891 WS01116.BR_M13 PT-P-FL-A-2 Populus t... 46 0.002
gb|DT493993.1|DT493993 WS01117.BR_B14 PT-P-FL-A-2 Populus t... 46 0.002
gb|DT495267.1|DT495267 WS0112.BR_P02 PT-P-FL-A-2 Populus tr... 46 0.002
gb|DT498922.1|DT498922 WS0116.BR_L21 PT-P-FL-A-2 Populus tr... 46 0.002
gb|DT508548.1|DT508548 WS02421.BR_E12 PTxD-ICC-N-A-14 Popul... 46 0.002
gb|DT513156.1|DT513156 WS02421.B21_E12 PTxD-ICC-N-A-14 Popu... 46 0.002
gb|DT516307.1|DT516307 WS02430.B21_P19 PTxD-ICC-N-A-14 Popu... 46 0.002
gb|DT517688.1|DT517688 WS02435.B21_A11 PTxD-ICC-N-A-14 Popu... 46 0.002
gb|BI129252.1|BI129252 G088P05Y Populus cambium cDNA librar... 44 0.009
gb|BU831977.1|BU831977 T028A05 Populus apical shoot cDNA li... 44 0.009
gb|BU836000.1|BU836000 T081D07 Populus apical shoot cDNA li... 44 0.009
gb|BU836685.1|BU836685 T089F07 Populus apical shoot cDNA li... 44 0.009
gb|CN521923.1|CN521923 GQ0123.B3_I24 GQ012 Populus trichoca... 44 0.009
gb|DT471458.1|DT471458 WS01213.BR_O20 PT-GT-FL-A-3 Populus ... 44 0.009
gb|BU818901.1|BU818901 UA37BPA06 Populus tremula cambium cD... 42 0.036
gb|BU875429.1|BU875429 V006H09 Populus flower cDNA library ... 42 0.036
gb|CV239073.1|CV239073 WS0231.B21_D22 PT-MB-A-13 Populus tr... 42 0.036
gb|CV248760.1|CV248760 WS01121.B21_N21 PT-P-FL-A-2 Populus ... 42 0.036
gb|CV250964.1|CV250964 WS0115.B21_G13 PT-P-FL-A-2 Populus t... 42 0.036
gb|CV254085.1|CV254085 WS0223.B21_P13 PTxD-ICC-A-12 Populus... 42 0.036
gb|CV257317.1|CV257317 WS0246.B21_E20 PTxD-ICC-N-A-14 Popul... 42 0.036
gb|CV257904.1|CV257904 WS0247.B21_P14 PTxD-ICC-N-A-14 Popul... 42 0.036
gb|CV260909.1|CV260909 WS02015.B21_F10 PTxN-IB-N-A-11 Popul... 42 0.036
gb|CV261125.1|CV261125 WS02015.B21_O23 PTxN-IB-N-A-11 Popul... 42 0.036
gb|CV267431.1|CV267431 WS02031.B21_L15 PTxN-IB-N-A-11 Popul... 42 0.036
gb|CV270518.1|CV270518 WS0152.B21_D09 PTxN-IB-A-6 Populus t... 42 0.036
gb|CV272409.1|CV272409 WS0157.B21_J09 PTxN-IB-A-6 Populus t... 42 0.036
gb|CX184997.1|CX184997 E05_45-15_09.ab1 leaf inoculated wit... 42 0.036
gb|BP923126.1|BP923126 BP923126 full-length enriched poplar... 42 0.036
gb|DT481523.1|DT481523 WS02532.BR_B21 PT-MB-N-A-15 Populus ... 42 0.036
gb|DT486855.1|DT486855 WS02532.B21_B21 PT-MB-N-A-15 Populus... 42 0.036
gb|DT495916.1|DT495916 WS01121.BR_N21 PT-P-FL-A-2 Populus t... 42 0.036
gb|DT496598.1|DT496598 WS01123.BR_N19 PT-P-FL-A-2 Populus t... 42 0.036
gb|DT498455.1|DT498455 WS0115.BR_G13 PT-P-FL-A-2 Populus tr... 42 0.036
gb|DT498732.1|DT498732 WS0116.BR_D09 PT-P-FL-A-2 Populus tr... 42 0.036
gb|DT523394.1|DT523394 WS02039.B21_J08 PTxN-IB-N-A-11 Popul... 42 0.036
gb|DT524763.1|DT524763 WS02043.C21_I14 PTxN-IB-N-A-11 Popul... 42 0.036
gb|AI166007.1|AI166007 B005p55u Hybrid aspen plasmid librar... 40 0.14
gb|BI121875.1|BI121875 F048P87Y Populus flower cDNA library... 40 0.14
gb|BI129769.1|BI129769 G095P39Y Populus cambium cDNA librar... 40 0.14
gb|BU830200.1|BU830200 T005C01 Populus apical shoot cDNA li... 40 0.14
gb|BU834976.1|BU834976 T068A01 Populus apical shoot cDNA li... 40 0.14
gb|BU835621.1|BU835621 T076C11 Populus apical shoot cDNA li... 40 0.14
gb|BU887338.1|BU887338 R058B02 Populus root cDNA library Po... 40 0.14
gb|CA926071.1|CA926071 MTU7TL.P9.G04 Aspen leaf cDNA Librar... 40 0.14
gb|CF231397.1|CF231397 PtaC0021A10A1002 Poplar cDNA library... 40 0.14
gb|CK089221.1|CK089221 B005P55.3pR Hybrid aspen plasmid lib... 40 0.14
gb|CK100025.1|CK100025 B005P55.5pR Hybrid aspen plasmid lib... 40 0.14
gb|CV233384.1|CV233384 WS01210.B21_G04 PT-GT-FL-A-3 Populus... 40 0.14
gb|CV247026.1|CV247026 WS01116.B21_M13 PT-P-FL-A-2 Populus ... 40 0.14
gb|DT469665.1|DT469665 WS01918.C21_I05 PT-DX-N-A-10 Populus... 40 0.14
>gb|AI165500.1|AI165500 A084p05u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 430
Score = 67.9 bits (34), Expect = 6e-010
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| |||| |||||||| |||||||| |||||| | || ||| | || ||||||
Sbjct: 182 gtctacctctctgctgtcctcgaatacctcgctgccgaggttcttgagctagctgggaac 241
Query: 312 gcagcgcgggacaacaagaagaaccggatc 341
||||| | || ||||||||||||||||||
Sbjct: 242 gcagcaagagataacaagaagaaccggatc 271
>gb|BU825619.1|BU825619 UK111TA09 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 463
Score = 67.9 bits (34), Expect = 6e-010
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| |||| |||||||| |||||||| |||||| | || ||| | || ||||||
Sbjct: 230 gtctacctctctgctgtcctcgaatacctcgctgccgaggttcttgagctagctgggaac 289
Query: 312 gcagcgcgggacaacaagaagaaccggatc 341
||||| | || ||||||||||||||||||
Sbjct: 290 gcagcaagagataacaagaagaaccggatc 319
>gb|BU827774.1|BU827774 K008P72P Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 349
Score = 67.9 bits (34), Expect = 6e-010
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| |||| |||||||| |||||||| |||||| | || ||| | || ||||||
Sbjct: 195 gtctacctctctgctgtcctcgaatacctcgctgccgaggttcttgagctagctgggaac 254
Query: 312 gcagcgcgggacaacaagaagaaccggatc 341
||||| | || ||||||||||||||||||
Sbjct: 255 gcagcaagagataacaagaagaaccggatc 284
>gb|CK109268.1|CK109268 K056P45 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA clone K056P45 5', mRNA sequence
Length = 646
Score = 67.9 bits (34), Expect = 6e-010
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| |||| |||||||| |||||||| |||||| | || ||| | || ||||||
Sbjct: 202 gtctacctctctgctgtcctcgaatacctcgctgccgaggttcttgagctagctgggaac 261
Query: 312 gcagcgcgggacaacaagaagaaccggatc 341
||||| | || ||||||||||||||||||
Sbjct: 262 gcagcaagagataacaagaagaaccggatc 291
>gb|CK110521.1|CK110521 N067F03 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA clone N067F03 5', mRNA sequence
Length = 700
Score = 67.9 bits (34), Expect = 6e-010
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| |||| |||||||| |||||||| |||||| | || ||| | || ||||||
Sbjct: 229 gtctacctctctgctgtcctcgaatacctcgctgccgaggttcttgagctagctgggaac 288
Query: 312 gcagcgcgggacaacaagaagaaccggatc 341
||||| | || ||||||||||||||||||
Sbjct: 289 gcagcaagagataacaagaagaaccggatc 318
>gb|CK117459.1|CK117459 B051P38 Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B051P38 5', mRNA sequence
Length = 392
Score = 67.9 bits (34), Expect = 6e-010
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| |||| |||||||| |||||||| |||||| | || ||| | || ||||||
Sbjct: 183 gtctacctctctgctgtcctcgaatacctcgctgccgaggttcttgagctagctgggaac 242
Query: 312 gcagcgcgggacaacaagaagaaccggatc 341
||||| | || ||||||||||||||||||
Sbjct: 243 gcagcaagagataacaagaagaaccggatc 272
>gb|CN522054.1|CN522054 GQ0122.B3_A02 GQ012 Populus trichocarpa x Populus deltoides cDNA
clone GQ0122_A02 5', mRNA sequence
Length = 554
Score = 67.9 bits (34), Expect = 6e-010
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| |||| |||||||| |||||||| |||||| | || ||| | || ||||||
Sbjct: 214 gtctacctctctgctgtcctcgaatacctcgctgccgaggttcttgagctagctgggaac 273
Query: 312 gcagcgcgggacaacaagaagaaccggatc 341
||||| | || ||||||||||||||||||
Sbjct: 274 gcagcaagagataacaagaagaaccggatc 303
>gb|CN522570.1|CN522570 GQ0121.B3_H07 GQ012 Populus trichocarpa x Populus deltoides cDNA
clone GQ0121_H07 5', mRNA sequence
Length = 357
Score = 67.9 bits (34), Expect = 6e-010
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| |||| |||||||| |||||||| |||||| | || ||| | || ||||||
Sbjct: 55 gtctacctctctgctgtcctcgaatacctcgctgccgaggttcttgagctagctgggaac 114
Query: 312 gcagcgcgggacaacaagaagaaccggatc 341
||||| | || ||||||||||||||||||
Sbjct: 115 gcagcaagagataacaagaagaaccggatc 144
>gb|CV249648.1|CV249648 WS01124.B21_N24 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01124_N24 3', mRNA sequence
Length = 701
Score = 67.9 bits (34), Expect = 6e-010
Identities = 76/90 (84%)
Strand = Plus / Minus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| |||| |||||||| |||||||| |||||| | || ||| | || ||||||
Sbjct: 488 gtctacctctctgctgtcctcgaatacctcgctgccgaggtgcttgagctagctgggaac 429
Query: 312 gcagcgcgggacaacaagaagaaccggatc 341
||||| | || ||||||||||||||||||
Sbjct: 428 gcagcaagagataacaagaagaaccggatc 399
>gb|CV257492.1|CV257492 WS0246.B21_N03 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0246_N03 3', mRNA sequence
Length = 705
Score = 67.9 bits (34), Expect = 6e-010
Identities = 76/90 (84%)
Strand = Plus / Minus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| |||| |||||||| |||||||| |||||| | || ||| | || ||||||
Sbjct: 491 gtctacctctctgctgtcctcgaatacctcgctgccgaggttcttgagctagctgggaac 432
Query: 312 gcagcgcgggacaacaagaagaaccggatc 341
||||| | || ||||||||||||||||||
Sbjct: 431 gcagcaagagataacaagaagaaccggatc 402
>gb|CV271342.1|CV271342 WS0154.B21_H02 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0154_H02 3', mRNA sequence
Length = 836
Score = 67.9 bits (34), Expect = 6e-010
Identities = 76/90 (84%)
Strand = Plus / Minus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| |||| |||||||| |||||||| |||||| | || ||| | || ||||||
Sbjct: 454 gtctacctctctgctgtcctcgaatacctcgctgccgaggttcttgagctagctgggaac 395
Query: 312 gcagcgcgggacaacaagaagaaccggatc 341
||||| | || ||||||||||||||||||
Sbjct: 394 gcagcaagagataacaagaagaaccggatc 365
>gb|DT472058.1|DT472058 WS0122.BR_P10 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0122_P10 5', mRNA sequence
Length = 530
Score = 67.9 bits (34), Expect = 6e-010
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| |||| |||||||| |||||||| |||||| | || ||| | || ||||||
Sbjct: 231 gtctacctctctgctgtcctcgaatacctcgctgccgaggtgcttgagctagctgggaac 290
Query: 312 gcagcgcgggacaacaagaagaaccggatc 341
||||| | || ||||||||||||||||||
Sbjct: 291 gcagcaagagataacaagaagaaccggatc 320
>gb|DT473778.1|DT473778 WS0123.BR_L09 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0123_L09 5', mRNA sequence
Length = 528
Score = 67.9 bits (34), Expect = 6e-010
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| |||| |||||||| |||||||| |||||| | || ||| | || ||||||
Sbjct: 231 gtctacctctctgctgtcctcgaatacctcgctgccgaggtgcttgagctagctgggaac 290
Query: 312 gcagcgcgggacaacaagaagaaccggatc 341
||||| | || ||||||||||||||||||
Sbjct: 291 gcagcaagagataacaagaagaaccggatc 320
>gb|DT474779.1|DT474779 WS0124.BR_P12 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0124_P12 5', mRNA sequence
Length = 623
Score = 67.9 bits (34), Expect = 6e-010
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| |||| |||||||| |||||||| |||||| | || ||| | || ||||||
Sbjct: 231 gtctacctctctgctgtcctcgaatacctcgctgccgaggtgcttgagctagctgggaac 290
Query: 312 gcagcgcgggacaacaagaagaaccggatc 341
||||| | || ||||||||||||||||||
Sbjct: 291 gcagcaagagataacaagaagaaccggatc 320
>gb|DT496898.1|DT496898 WS01124.BR_N24 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01124_N24 5', mRNA sequence
Length = 723
Score = 67.9 bits (34), Expect = 6e-010
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| |||| |||||||| |||||||| |||||| | || ||| | || ||||||
Sbjct: 236 gtctacctctctgctgtcctcgaatacctcgctgccgaggtgcttgagctagctgggaac 295
Query: 312 gcagcgcgggacaacaagaagaaccggatc 341
||||| | || ||||||||||||||||||
Sbjct: 296 gcagcaagagataacaagaagaaccggatc 325
>gb|DT509938.1|DT509938 WS02425.BR_C11 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_C11 5', mRNA sequence
Length = 658
Score = 67.9 bits (34), Expect = 6e-010
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| |||| |||||||| |||||||| |||||| | || ||| | || ||||||
Sbjct: 216 gtctacctctctgctgtcctcgaatacctcgctgccgaggttcttgagctagctgggaac 275
Query: 312 gcagcgcgggacaacaagaagaaccggatc 341
||||| | || ||||||||||||||||||
Sbjct: 276 gcagcaagagataacaagaagaaccggatc 305
>gb|DT514559.1|DT514559 WS02425.B21_C11 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_C11 3', mRNA sequence
Length = 688
Score = 67.9 bits (34), Expect = 6e-010
Identities = 76/90 (84%)
Strand = Plus / Minus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| |||| |||||||| |||||||| |||||| | || ||| | || ||||||
Sbjct: 473 gtctacctctctgctgtcctcgaatacctcgctgccgaggttcttgagctagctgggaac 414
Query: 312 gcagcgcgggacaacaagaagaaccggatc 341
||||| | || ||||||||||||||||||
Sbjct: 413 gcagcaagagataacaagaagaaccggatc 384
>gb|AI165733.1|AI165733 A089p75u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 290
Score = 60.0 bits (30), Expect = 2e-007
Identities = 76/90 (84%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| |||| |||||||| |||||||| |||||| || | ||| | || ||||||
Sbjct: 162 gtctacctctctgctgtcctcgaatacctcgctgccgaggtctt-gagctagctgggaac 220
Query: 312 gcagcgcgggacaacaagaagaaccggatc 341
||||| | || ||||||||||||||||||
Sbjct: 221 gcagcaagagataacaagaagaaccggatc 250
>gb|CK095382.1|CK095382 I081P88.3pR Populus senescing leaves cDNA library Populus tremula
cDNA clone I081P88 3', mRNA sequence
Length = 621
Score = 56.0 bits (28), Expect = 2e-006
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
|||||||| ||||| || ||||||||||| || || || ||||||||||||| || |||
Sbjct: 340 gtctaccttgctgctgttctcgagtaccttgcagctgaaatcctcgagttggctggtaac 281
Query: 312 gcagcgcgggacaacaagaa 331
|| || || |||||||||||
Sbjct: 280 gccgcccgagacaacaagaa 261
>gb|CK105294.1|CK105294 I081P88.5pR Populus senescing leaves cDNA library Populus tremula
cDNA clone I081P88 5', mRNA sequence
Length = 501
Score = 56.0 bits (28), Expect = 2e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
|||||||| ||||| || ||||||||||| || || || ||||||||||||| || |||
Sbjct: 258 gtctaccttgctgctgttctcgagtaccttgcagctgaaatcctcgagttggctggtaac 317
Query: 312 gcagcgcgggacaacaagaa 331
|| || || |||||||||||
Sbjct: 318 gccgcccgagacaacaagaa 337
>gb|CF231041.1|CF231041 PtaC0016F1F0111 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 749
Score = 52.0 bits (26), Expect = 4e-005
Identities = 74/90 (82%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| |||| |||||||| |||||||| |||||| | || || | || ||||||
Sbjct: 229 gtctacctctctgctgtcctcgaatacctcgctgccgaggttcttgaactagctgggaac 288
Query: 312 gcagcgcgggacaacaagaagaaccggatc 341
||||| | || |||||||||||| |||||
Sbjct: 289 gcagcaagagataacaagaagaactggatc 318
>gb|CV237683.1|CV237683 WS0123.B21_L09 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0123_L09 3', mRNA sequence
Length = 589
Score = 52.0 bits (26), Expect = 4e-005
Identities = 74/90 (82%)
Strand = Plus / Minus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| |||| |||||||| |||||||| |||||| | || ||| | || ||||||
Sbjct: 518 gtctacctctctgctgtcctcgaatacctcgctgccgaggtgcttgagctagctgggaac 459
Query: 312 gcagcgcgggacaacaagaagaaccggatc 341
||||| | || | |||||||| |||||||
Sbjct: 458 gcagcaagagataccaagaagacccggatc 429
>gb|CV238011.1|CV238011 WS0124.B21_P12 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0124_P12 3', mRNA sequence
Length = 658
Score = 52.0 bits (26), Expect = 4e-005
Identities = 74/90 (82%)
Strand = Plus / Minus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| |||| |||||||| |||||||| |||||| | || ||| | || ||||||
Sbjct: 521 gtctacctctctgctgtcctcgaatacctcgctgccgaggtgcttgagctagctgggaac 462
Query: 312 gcagcgcgggacaacaagaagaaccggatc 341
||||| | || | |||||||| |||||||
Sbjct: 461 gcagcaagagataccaagaagacccggatc 432
>gb|BU834022.1|BU834022 T055F05 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 297
Score = 50.1 bits (25), Expect = 1e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| |||| |||||||| |||||||| |||||| | || ||| | || ||||||
Sbjct: 229 gtctacctctctgctgtcctcgaatacctcgctgccgaggttcttgagctagctgggaac 288
Query: 312 gcagc 316
|||||
Sbjct: 289 gcagc 293
>gb|CK091100.1|CK091100 F048P87.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F048P87 3', mRNA sequence
Length = 576
Score = 48.1 bits (24), Expect = 6e-004
Identities = 75/92 (81%)
Strand = Plus / Minus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| | || ||||| || |||||||| |||||| | || ||| | || |||||
Sbjct: 364 gtctacctctccgctgtccttgaatacctcgctgccgaggttcttgagcttgctgggaat 305
Query: 312 gcagcgcgggacaacaagaagaaccggatcat 343
|| ||| | || ||||||||||||||||||||
Sbjct: 304 gctgcgagagataacaagaagaaccggatcat 273
>gb|CV238303.1|CV238303 WS0126.B21_B11 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0126_B11 3', mRNA sequence
Length = 595
Score = 48.1 bits (24), Expect = 6e-004
Identities = 75/92 (81%)
Strand = Plus / Minus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| | || ||||| || |||||||| |||||| | || ||| | || |||||
Sbjct: 380 gtctacctctccgctgtccttgaatacctcgctgccgaggttcttgagcttgctgggaat 321
Query: 312 gcagcgcgggacaacaagaagaaccggatcat 343
|| ||| | || ||||||||||||||||||||
Sbjct: 320 gctgcgagagataacaagaagaaccggatcat 289
>gb|CV246234.1|CV246234 WS0111.B21_L14 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0111_L14 3', mRNA sequence
Length = 640
Score = 48.1 bits (24), Expect = 6e-004
Identities = 75/92 (81%)
Strand = Plus / Minus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| | || ||||| || |||||||| |||||| | || ||| | || |||||
Sbjct: 379 gtctacctctccgctgtccttgaatacctcgctgccgaggttcttgagcttgctgggaat 320
Query: 312 gcagcgcgggacaacaagaagaaccggatcat 343
|| ||| | || ||||||||||||||||||||
Sbjct: 319 gctgcgagagataacaagaagaaccggatcat 288
>gb|CV247051.1|CV247051 WS01116.B21_N15 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01116_N15 3', mRNA sequence
Length = 697
Score = 48.1 bits (24), Expect = 6e-004
Identities = 84/104 (80%)
Strand = Plus / Minus
Query: 231 cgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccgag 290
|||||||| |||| || ||||||||||| |||| ||||| ||||| ||||| ||||||
Sbjct: 482 cgtgtcggtgccggagctcccgtctacctttctgctgtccttgagtatctcgctgccgag 423
Query: 291 ctcctcgagttggcggggaacgcagcgcgggacaacaagaagaa 334
| || ||| | || ||||||||||| | || |||||||||||
Sbjct: 422 gtgcttgagctagcagggaacgcagcaagagataacaagaagaa 379
>gb|CV260031.1|CV260031 WS02012.B21_P09 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02012_P09 3', mRNA sequence
Length = 661
Score = 48.1 bits (24), Expect = 6e-004
Identities = 84/104 (80%)
Strand = Plus / Plus
Query: 231 cgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccgag 290
|||||||| |||| || ||||||||||| |||| ||||| ||||| ||||| ||||||
Sbjct: 193 cgtgtcggtgccggagctcccgtctacctttctgctgtccttgagtatctcgctgccgag 252
Query: 291 ctcctcgagttggcggggaacgcagcgcgggacaacaagaagaa 334
| || ||| | || ||||||||||| | || |||||||||||
Sbjct: 253 gtgcttgagctagcagggaacgcagcaagagataacaagaagaa 296
>gb|DT475123.1|DT475123 WS0126.BR_B11 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0126_B11 5', mRNA sequence
Length = 492
Score = 48.1 bits (24), Expect = 6e-004
Identities = 75/92 (81%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| | || ||||| || |||||||| |||||| | || ||| | || |||||
Sbjct: 231 gtctacctctccgctgtccttgaatacctcgctgccgaggttcttgagcttgctgggaat 290
Query: 312 gcagcgcgggacaacaagaagaaccggatcat 343
|| ||| | || ||||||||||||||||||||
Sbjct: 291 gctgcgagagataacaagaagaaccggatcat 322
>gb|DT493558.1|DT493558 WS0111.BR_L14 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0111_L14
5', mRNA sequence
Length = 538
Score = 48.1 bits (24), Expect = 6e-004
Identities = 75/92 (81%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| | || ||||| || |||||||| |||||| | || ||| | || |||||
Sbjct: 231 gtctacctctccgctgtccttgaatacctcgctgccgaggttcttgagcttgctgggaat 290
Query: 312 gcagcgcgggacaacaagaagaaccggatcat 343
|| ||| | || ||||||||||||||||||||
Sbjct: 291 gctgcgagagataacaagaagaaccggatcat 322
>gb|DT493914.1|DT493914 WS01116.BR_N15 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01116_N15 5', mRNA sequence
Length = 556
Score = 48.1 bits (24), Expect = 6e-004
Identities = 84/104 (80%)
Strand = Plus / Plus
Query: 231 cgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccgag 290
|||||||| |||| || ||||||||||| |||| ||||| ||||| ||||| ||||||
Sbjct: 228 cgtgtcggtgccggagctcccgtctacctttctgctgtccttgagtatctcgctgccgag 287
Query: 291 ctcctcgagttggcggggaacgcagcgcgggacaacaagaagaa 334
| || ||| | || ||||||||||| | || |||||||||||
Sbjct: 288 gtgcttgagctagcagggaacgcagcaagagataacaagaagaa 331
>gb|DT506811.1|DT506811 WS02416.BR_J07 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02416_J07 5', mRNA sequence
Length = 642
Score = 48.1 bits (24), Expect = 6e-004
Identities = 75/92 (81%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| | || ||||| || |||||||| |||||| | || ||| | || |||||
Sbjct: 203 gtctacctctccgctgtccttgaatacctcgctgccgaggttcttgagcttgctgggaat 262
Query: 312 gcagcgcgggacaacaagaagaaccggatcat 343
|| ||| | || ||||||||||||||||||||
Sbjct: 263 gctgcgagagataacaagaagaaccggatcat 294
>gb|DT508938.1|DT508938 WS02422.BR_F13 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_F13 5', mRNA sequence
Length = 580
Score = 48.1 bits (24), Expect = 6e-004
Identities = 75/92 (81%)
Strand = Plus / Plus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| | || ||||| || |||||||| |||||| | || ||| | || |||||
Sbjct: 201 gtctacctctccgctgtccttgaatacctcgctgccgaggttcttgagcttgctgggaat 260
Query: 312 gcagcgcgggacaacaagaagaaccggatcat 343
|| ||| | || ||||||||||||||||||||
Sbjct: 261 gctgcgagagataacaagaagaaccggatcat 292
>gb|DT511479.1|DT511479 WS02416.B21_J07 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02416_J07 3', mRNA sequence
Length = 642
Score = 48.1 bits (24), Expect = 6e-004
Identities = 75/92 (81%)
Strand = Plus / Minus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| | || ||||| || |||||||| |||||| | || ||| | || |||||
Sbjct: 440 gtctacctctccgctgtccttgaatacctcgctgccgaggttcttgagcttgctgggaat 381
Query: 312 gcagcgcgggacaacaagaagaaccggatcat 343
|| ||| | || ||||||||||||||||||||
Sbjct: 380 gctgcgagagataacaagaagaaccggatcat 349
>gb|DT513546.1|DT513546 WS02422.B21_F13 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_F13 3', mRNA sequence
Length = 580
Score = 48.1 bits (24), Expect = 6e-004
Identities = 75/92 (81%)
Strand = Plus / Minus
Query: 252 gtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaac 311
||||||||| | || ||||| || |||||||| |||||| | || ||| | || |||||
Sbjct: 380 gtctacctctccgctgtccttgaatacctcgctgccgaggttcttgagcttgctgggaat 321
Query: 312 gcagcgcgggacaacaagaagaaccggatcat 343
|| ||| | || ||||||||||||||||||||
Sbjct: 320 gctgcgagagataacaagaagaaccggatcat 289
>gb|DT524917.1|DT524917 WS02043.C21_P01 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02043_P01 3', mRNA sequence
Length = 661
Score = 48.1 bits (24), Expect = 6e-004
Identities = 84/104 (80%)
Strand = Plus / Plus
Query: 231 cgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccgag 290
|||||||| |||| || ||||||||||| |||| ||||| ||||| ||||| ||||||
Sbjct: 193 cgtgtcggtgccggagctcccgtctacctttctgctgtccttgagtatctcgctgccgag 252
Query: 291 ctcctcgagttggcggggaacgcagcgcgggacaacaagaagaa 334
| || ||| | || ||||||||||| | || |||||||||||
Sbjct: 253 gtgcttgagctagcagggaacgcagcaagagataacaagaagaa 296
>gb|AJ772123.1|AJ772123 AJ772123 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700001G03F1, mRNA sequence
Length = 697
Score = 46.1 bits (23), Expect = 0.002
Identities = 158/203 (77%)
Strand = Plus / Plus
Query: 138 aagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatc 197
|||||||| ||||| || ||||||| || ||||| || || ||||| || || || |||
Sbjct: 113 aagaagaaaccggtgtcccgctccgccaaagccggtcttcaattccctgttggtcggatc 172
Query: 198 ggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctac 257
||||| ||| | ||| | || || ||||| || ||||| || |||| || |||||||||
Sbjct: 173 ggccgatacttgaagaaaggccgttactctcaacgtgttggatccggagctcccgtctac 232
Query: 258 ctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcg 317
|| ||||| || |||||||| || ||||| ||| | | ||| |||| || || |||||
Sbjct: 233 cttgctgctgtgctcgagtatcttgccgctgaggttttagagctggctggaaatgcagca 292
Query: 318 cgggacaacaagaagaaccggat 340
|||| |||||||||||| ||||
Sbjct: 293 agggataacaagaagaacaggat 315
>gb|AJ774619.1|AJ774619 AJ774619 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300022D10F1, mRNA sequence
Length = 692
Score = 46.1 bits (23), Expect = 0.002
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 261 gctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcgg 320
||||| || ||||| |||||||| || ||| | || |||||||| || || |||||| |
Sbjct: 247 gctgctgttctcgaatacctcgctgctgaggtgctggagttggctggaaatgcagcgaga 306
Query: 321 gacaacaagaagaaccggatcatcccgcgacacgt 355
||||||||||||| | |||||| ||| |||||||
Sbjct: 307 gacaacaagaagaccaggatcaaccctagacacgt 341
>gb|AJ774981.1|AJ774981 AJ774981 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300026E03F1, mRNA sequence
Length = 598
Score = 46.1 bits (23), Expect = 0.002
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 261 gctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcgg 320
||||| || ||||| |||||||| || ||| | || |||||||| || || |||||| |
Sbjct: 218 gctgctgttctcgaatacctcgctgctgaggtgctggagttggctggaaatgcagcgaga 277
Query: 321 gacaacaagaagaaccggatcatcccgcgacacgt 355
||||||||||||| | |||||| ||| |||||||
Sbjct: 278 gacaacaagaagaccaggatcaaccctagacacgt 312
>gb|CV234180.1|CV234180 WS01213.B21_O20 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01213_O20 3', mRNA sequence
Length = 617
Score = 46.1 bits (23), Expect = 0.002
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 261 gctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcgg 320
|||||||| || || |||||||| || ||| | || |||||||| || || |||||| |
Sbjct: 475 gctgccgttcttgaatacctcgctgctgaggtgctggagttggctggaaatgcagcgaga 416
Query: 321 gacaacaagaagaaccggatcatcccgcgacacgt 355
||||||||||||| | |||||| ||| |||||||
Sbjct: 415 gacaacaagaagaccaggatcaacccaagacacgt 381
>gb|CV234640.1|CV234640 WS01215.B21.1_K19 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01215_K19 3', mRNA sequence
Length = 731
Score = 46.1 bits (23), Expect = 0.002
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 261 gctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcgg 320
|||||||| || || |||||||| || ||| | || |||||||| || || |||||| |
Sbjct: 474 gctgccgttcttgaatacctcgctgctgaggtgctggagttggctggaaatgcagcgaga 415
Query: 321 gacaacaagaagaaccggatcatcccgcgacacgt 355
||||||||||||| | |||||| ||| |||||||
Sbjct: 414 gacaacaagaagaccaggatcaacccaagacacgt 380
>gb|CV247122.1|CV247122 WS01117.B21_B14 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01117_B14 3', mRNA sequence
Length = 661
Score = 46.1 bits (23), Expect = 0.002
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 261 gctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcgg 320
|||||||| || || |||||||| || ||| | || |||||||| || || |||||| |
Sbjct: 357 gctgccgttcttgaatacctcgctgctgaggtgctggagttggctggaaatgcagcgaga 298
Query: 321 gacaacaagaagaaccggatcatcccgcgacacgt 355
||||||||||||| | |||||| ||| |||||||
Sbjct: 297 gacaacaagaagaccaggatcaacccaagacacgt 263
>gb|CV248239.1|CV248239 WS0112.B21_P02 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0112_P02 3', mRNA sequence
Length = 664
Score = 46.1 bits (23), Expect = 0.002
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 261 gctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcgg 320
|||||||| || || |||||||| || ||| | || |||||||| || || |||||| |
Sbjct: 357 gctgccgttcttgaatacctcgctgctgaggtgctggagttggctggaaatgcagcgaga 298
Query: 321 gacaacaagaagaaccggatcatcccgcgacacgt 355
||||||||||||| | |||||| ||| |||||||
Sbjct: 297 gacaacaagaagaccaggatcaacccaagacacgt 263
>gb|CV251360.1|CV251360 WS0116.B21_L21 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0116_L21 3', mRNA sequence
Length = 628
Score = 46.1 bits (23), Expect = 0.002
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 261 gctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcgg 320
|||||||| || || |||||||| || ||| | || |||||||| || || |||||| |
Sbjct: 474 gctgccgttcttgaatacctcgctgctgaggtgctggagttggctggaaatgcagcgaga 415
Query: 321 gacaacaagaagaaccggatcatcccgcgacacgt 355
||||||||||||| | |||||| ||| |||||||
Sbjct: 414 gacaacaagaagaccaggatcaacccaagacacgt 380
>gb|CV251543.1|CV251543 WS0117.B21_G21 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0117_G21 3', mRNA sequence
Length = 528
Score = 46.1 bits (23), Expect = 0.002
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 261 gctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcgg 320
|||||||| || || |||||||| || ||| | || |||||||| || || |||||| |
Sbjct: 479 gctgccgttcttgaatacctcgctgctgaggtgctggagttggctggaaatgcagcgaga 420
Query: 321 gacaacaagaagaaccggatcatcccgcgacacgt 355
||||||||||||| | |||||| ||| |||||||
Sbjct: 419 gacaacaagaagaccaggatcaacccaagacacgt 385
>gb|CV271052.1|CV271052 WS0153.B21_K15 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0153_K15 3', mRNA sequence
Length = 725
Score = 46.1 bits (23), Expect = 0.002
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 261 gctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcgg 320
|||||||| || || |||||||| || ||| | || |||||||| || || |||||| |
Sbjct: 482 gctgccgttcttgaatacctcgctgctgaggtgctggagttggctggaaatgcagcgaga 423
Query: 321 gacaacaagaagaaccggatcatcccgcgacacgt 355
||||||||||||| | |||||| ||| |||||||
Sbjct: 422 gacaacaagaagaccaggatcaacccaagacacgt 388
>gb|DT470702.1|DT470702 WS01210.BR_G04 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01210_G04 5', mRNA sequence
Length = 654
Score = 46.1 bits (23), Expect = 0.002
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 261 gctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcgg 320
|||||||| || || |||||||| || ||| | || |||||||| || || |||||| |
Sbjct: 275 gctgccgttcttgaatacctcgctgctgaggtgctggagttggctggaaatgcagcgaga 334
Query: 321 gacaacaagaagaaccggatcatcccgcgacacgt 355
||||||||||||| | |||||| ||| |||||||
Sbjct: 335 gacaacaagaagaccaggatcaacccaagacacgt 369
>gb|DT473569.1|DT473569 WS0123.BR_A20 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0123_A20 5', mRNA sequence
Length = 659
Score = 46.1 bits (23), Expect = 0.002
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 261 gctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcgg 320
|||||||| || || |||||||| || ||| | || |||||||| || || |||||| |
Sbjct: 274 gctgccgttcttgaatacctcgctgctgaggtgctggagttggctggaaatgcagcgaga 333
Query: 321 gacaacaagaagaaccggatcatcccgcgacacgt 355
||||||||||||| | |||||| ||| |||||||
Sbjct: 334 gacaacaagaagaccaggatcaacccaagacacgt 368
>gb|DT473884.1|DT473884 WS01230.BR_A15 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01230_A15 5', mRNA sequence
Length = 748
Score = 46.1 bits (23), Expect = 0.002
Identities = 77/95 (81%)
Strand = Plus / Plus
Query: 261 gctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcgg 320
|||||||| || || |||||||| || ||| | || |||||||| || || |||||| |
Sbjct: 274 gctgccgttcttgaatacctcgctgctgaggtgctggagttggctggaaatgcagcgaga 333
Query: 321 gacaacaagaagaaccggatcatcccgcgacacgt 355
||||||||||||| | |||||| ||| |||||||
Sbjct: 334 gacaacaagaagaccaggatcaacccaagacacgt 368
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 92,274
Number of Sequences: 369679
Number of extensions: 92274
Number of successful extensions: 27478
Number of sequences better than 0.5: 102
Number of HSP's better than 0.5 without gapping: 101
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 27312
Number of HSP's gapped (non-prelim): 135
length of query: 887
length of database: 203,408,664
effective HSP length: 19
effective length of query: 868
effective length of database: 196,384,763
effective search space: 170461974284
effective search space used: 170461974284
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)