BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521502.2.2
(1862 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA933080.1|CA933080 MTU5CS.P3.C02 Aspen stem cDNA Librar... 105 6e-021
gb|CA934441.1|CA934441 MTU3TS.P7.F07 Aspen stem cDNA Librar... 105 6e-021
gb|CX655058.1|CX655058 PO01004C10 Poplar SC cDNA library Po... 103 2e-020
gb|CX655331.1|CX655331 PO02033D03 Poplar SC cDNA library Po... 103 2e-020
gb|CX658203.1|CX658203 PO01011B09 Poplar SC cDNA library Po... 103 2e-020
gb|CX659587.1|CX659587 PO01032E03 Poplar SC cDNA library Po... 103 2e-020
gb|CV231036.1|CV231036 WS0193.B21_F18 PT-DX-N-A-10 Populus ... 101 9e-020
gb|CV260860.1|CV260860 WS02015.B21_D06 PTxN-IB-N-A-11 Popul... 101 9e-020
gb|CV266526.1|CV266526 WS0203.B21_E10 PTxN-IB-N-A-11 Populu... 101 9e-020
gb|CX180900.1|CX180900 D09_45-15_07.ab1 leaf inoculated wit... 101 9e-020
gb|BI122528.1|BI122528 I008P49P Populus leaf cDNA library P... 100 4e-019
gb|BI123801.1|BI123801 I029P03P Populus leaf cDNA library P... 100 4e-019
gb|BU871743.1|BU871743 Q033H09 Populus flower cDNA library ... 100 4e-019
gb|BU809545.1|BU809545 UL59TB06 Populus leaf cDNA library P... 96 6e-018
gb|BU810606.1|BU810606 UL73PA11 Populus leaf cDNA library P... 96 6e-018
gb|BU881920.1|BU881920 UM69TC10 Populus flower cDNA library... 96 6e-018
gb|BU882161.1|BU882161 UM73TD09 Populus flower cDNA library... 96 6e-018
gb|BU895952.1|BU895952 X033E01 Populus wood cDNA library Po... 96 6e-018
gb|CA924446.1|CA924446 MTU7CL.P5.G07 Aspen leaf cDNA Librar... 96 6e-018
gb|CA934191.1|CA934191 MTU3TS.P4.C12 Aspen stem cDNA Librar... 96 6e-018
gb|CA822112.1|CA822112 R03H07 two-month-old roots from clon... 96 6e-018
gb|CK110308.1|CK110308 N055E03 Populus bark cDNA library Po... 96 6e-018
gb|CN519842.1|CN519842 GQ0105.B3_O07 GQ010 Populus trichoca... 96 6e-018
gb|CN520813.1|CN520813 GQ0105.B3_I19 GQ010 Populus trichoca... 96 6e-018
gb|CN521628.1|CN521628 GQ0111.B3_K06 GQ011 Populus trichoca... 96 6e-018
gb|CN523716.1|CN523716 GQ015M11.T3_F07 GQ015 Populus tricho... 96 6e-018
gb|CN524033.1|CN524033 GQ015M07.T3_H08 GQ015 Populus tricho... 96 6e-018
gb|CN524463.1|CN524463 GQ015M14.T3_C06 GQ015 Populus tricho... 96 6e-018
gb|CK319047.1|CK319047 X9P06c10 Populus stem seasonal libra... 96 6e-018
gb|CK319328.1|CK319328 X9P09e05 Populus stem seasonal libra... 96 6e-018
gb|CK319666.1|CK319666 B9SP07g11 Populus stem seasonal libr... 96 6e-018
gb|AJ767787.1|AJ767787 AJ767787 Populus euphratica leaf adu... 96 6e-018
gb|AJ768807.1|AJ768807 AJ768807 Populus euphratica leaf adu... 96 6e-018
gb|CV130762.1|CV130762 B9SP10e02 Populus stem seasonal libr... 96 6e-018
gb|CV131869.1|CV131869 L4P01c08 Populus stem seasonal libra... 96 6e-018
gb|CV225639.1|CV225639 WS0161.B21_P17 PT-DX-A-7 Populus tri... 96 6e-018
gb|CV225683.1|CV225683 WS0162.B21_B18 PT-DX-A-7 Populus tri... 96 6e-018
gb|CV226542.1|CV226542 WS0164.B21_J05 PT-DX-A-7 Populus tri... 96 6e-018
gb|CV227887.1|CV227887 WS0168.B21_I02 PT-DX-A-7 Populus tri... 96 6e-018
gb|CV235059.1|CV235059 WS01217.B21_I08 PT-GT-FL-A-3 Populus... 96 6e-018
gb|CV237275.1|CV237275 WS01227.B21.1_D07 PT-GT-FL-A-3 Popul... 96 6e-018
gb|CV243884.1|CV243884 WS0253.B21_C02 PT-MB-N-A-15 Populus ... 96 6e-018
gb|CV248379.1|CV248379 WS01120.B21_I05 PT-P-FL-A-2 Populus ... 96 6e-018
gb|CV259366.1|CV259366 WS02011.B21_C18 PTxN-IB-N-A-11 Popul... 96 6e-018
gb|CV263865.1|CV263865 WS02022.B21_P21 PTxN-IB-N-A-11 Popul... 96 6e-018
gb|CV266199.1|CV266199 WS02029.B21_F23 PTxN-IB-N-A-11 Popul... 96 6e-018
gb|CV268617.1|CV268617 WS0205.B21_P18 PTxN-IB-N-A-11 Populu... 96 6e-018
gb|CV273941.1|CV273941 WS01712.B21_K24 PTxD-NR-A-8 Populus ... 96 6e-018
gb|CV279423.1|CV279423 WS0131.B21_L05 PTxD-IL-FL-A-4 Populu... 96 6e-018
gb|CV282978.1|CV282978 WS0186.B21_B19 PTxD-IL-N-A-9 Populus... 96 6e-018
gb|CX167570.1|CX167570 G04_69-80_14.ab1 leaf inoculated wit... 96 6e-018
gb|CX655131.1|CX655131 PO02030C10 Poplar SC cDNA library Po... 96 6e-018
gb|DN500645.1|DN500645 UL72PB09.5pR Populus cold stressed l... 96 6e-018
gb|DT478333.1|DT478333 WS02522.BR_I01 PT-MB-N-A-15 Populus ... 96 6e-018
gb|DT483406.1|DT483406 WS02522.B21_I01 PT-MB-N-A-15 Populus... 96 6e-018
gb|DT495452.1|DT495452 WS01120.BR_I05 PT-P-FL-A-2 Populus t... 96 6e-018
gb|DT510787.1|DT510787 WS02427.BR_J24 PTxD-ICC-N-A-14 Popul... 96 6e-018
gb|DT515460.1|DT515460 WS02427.B21_J24 PTxD-ICC-N-A-14 Popu... 96 6e-018
gb|DT516875.1|DT516875 WS02432.B21_K16 PTxD-ICC-N-A-14 Popu... 96 6e-018
gb|DT522688.1|DT522688 WS02037.B21_K20 PTxN-IB-N-A-11 Popul... 96 6e-018
gb|CV275181.1|CV275181 WS0175.B21_K08 PTxD-NR-A-8 Populus t... 92 9e-017
gb|CA933614.1|CA933614 MTU3TS.P9.E02 Aspen stem cDNA Librar... 88 1e-015
gb|CF119745.1|CF119745 MTU10CS.P5.G11 Aspen stem cDNA Libra... 88 1e-015
gb|BI122408.1|BI122408 I006P33P Populus leaf cDNA library P... 84 2e-014
gb|BI122693.1|BI122693 I011P62P Populus leaf cDNA library P... 84 2e-014
gb|BI123096.1|BI123096 I017P55P Populus leaf cDNA library P... 84 2e-014
gb|BI123149.1|BI123149 I018P22P Populus leaf cDNA library P... 84 2e-014
gb|BI124865.1|BI124865 I052P06P Populus leaf cDNA library P... 84 2e-014
gb|DN490654.1|DN490654 UL72PB09.3pR Populus cold stressed l... 84 2e-014
gb|BU808779.1|BU808779 UL100TH05 Populus leaf cDNA library ... 80 3e-013
gb|BU818842.1|BU818842 UA35CPD02 Populus tremula cambium cD... 80 3e-013
gb|BU827652.1|BU827652 K006P50P Populus apical shoot cDNA l... 78 1e-012
gb|CV230234.1|CV230234 WS01915.B21_N14 PT-DX-N-A-10 Populus... 76 5e-012
gb|CV260944.1|CV260944 WS02015.B21_G21 PTxN-IB-N-A-11 Popul... 76 5e-012
gb|CK116126.1|CK116126 Y020C12 Populus infected leaf substr... 74 2e-011
gb|BI124241.1|BI124241 I039P40P Populus leaf cDNA library P... 70 3e-010
gb|BU863886.1|BU863886 S033E11 Populus imbibed seed cDNA li... 68 1e-009
gb|BU898139.1|BU898139 X075D07 Populus wood cDNA library Po... 68 1e-009
gb|CV282202.1|CV282202 WS0183.B21_P19 PTxD-IL-N-A-9 Populus... 68 1e-009
gb|BI127247.1|BI127247 G057P55Y Populus cambium cDNA librar... 66 5e-009
gb|BU865625.1|BU865625 S056D03 Populus imbibed seed cDNA li... 66 5e-009
gb|BU897893.1|BU897893 X071E08 Populus wood cDNA library Po... 66 5e-009
gb|CA932302.1|CA932302 MTU5CS.P11.C02 Aspen stem cDNA Libra... 66 5e-009
gb|CA932303.1|CA932303 MTU5CS.P11.C04 Aspen stem cDNA Libra... 66 5e-009
gb|CA933013.1|CA933013 MTU5CS.P2.D03 Aspen stem cDNA Librar... 66 5e-009
gb|CA933333.1|CA933333 MTU5CS.P6.F02 Aspen stem cDNA Librar... 66 5e-009
gb|CF119765.1|CF119765 MTU10CS.P6.A09 Aspen stem cDNA Libra... 66 5e-009
gb|CK107796.1|CK107796 G057P55 Populus tension wood cDNA li... 66 5e-009
gb|BI127030.1|BI127030 I085P05P Populus leaf cDNA library P... 64 2e-008
gb|BI125941.1|BI125941 I068P23P Populus leaf cDNA library P... 60 3e-007
gb|BU893286.1|BU893286 P075G04 Populus petioles cDNA librar... 58 1e-006
gb|BU895097.1|BU895097 X019C02 Populus wood cDNA library Po... 58 1e-006
gb|BU895508.1|BU895508 X025B02 Populus wood cDNA library Po... 58 1e-006
gb|BU895515.1|BU895515 X025B09 Populus wood cDNA library Po... 58 1e-006
gb|CA932200.1|CA932200 MTU5CS.P6.D02 Aspen stem cDNA Librar... 58 1e-006
gb|CN192935.1|CN192935 PtdH1957 hybrid poplar systemically ... 58 1e-006
gb|CV229800.1|CV229800 WS01914.B21_H11 PT-DX-N-A-10 Populus... 58 1e-006
gb|DT472677.1|DT472677 WS01227.BR.1_D07 PT-GT-FL-A-3 Populu... 58 1e-006
gb|DT501152.1|DT501152 WS0131.BR_L05 PTxD-IL-FL-A-4 Populus... 58 1e-006
gb|DV465528.1|DV465528 MTUNUL1.P4.G08 NUL Populus fremontii... 58 1e-006
gb|BU875330.1|BU875330 V005D11 Populus flower cDNA library ... 54 2e-005
gb|BU876101.1|BU876101 V016B06 Populus flower cDNA library ... 54 2e-005
gb|BU876119.1|BU876119 V016D09 Populus flower cDNA library ... 54 2e-005
gb|BU879673.1|BU879673 V063A09 Populus flower cDNA library ... 54 2e-005
gb|CK110994.1|CK110994 P078E09 Populus petioles cDNA librar... 52 8e-005
gb|BU832584.1|BU832584 T035H02 Populus apical shoot cDNA li... 50 3e-004
gb|BU868924.1|BU868924 M123G12 Populus flower cDNA library ... 50 3e-004
gb|CF232067.1|CF232067 PtaJXO0006B1B0103 Poplar cDNA librar... 50 3e-004
gb|CN550038.1|CN550038 GQ0243.B3_N07 GQ024 Populus trichoca... 50 3e-004
gb|AJ767899.1|AJ767899 AJ767899 Populus euphratica leaf adu... 50 3e-004
gb|CV256493.1|CV256493 WS0244.B21_A02 PTxD-ICC-N-A-14 Popul... 50 3e-004
gb|CX171178.1|CX171178 H02_69-33_16.ab1 leaf inoculated wit... 50 3e-004
gb|CX171879.1|CX171879 D12_69-45_08.ab1 leaf inoculated wit... 50 3e-004
gb|BP927277.1|BP927277 BP927277 full-length enriched poplar... 50 3e-004
gb|BP928992.1|BP928992 BP928992 full-length enriched poplar... 50 3e-004
gb|DN493903.1|DN493903 I031P58.5pR Populus senescing leaves... 50 3e-004
gb|DN493943.1|DN493943 I042P09.5pR Populus senescing leaves... 50 3e-004
gb|DT507621.1|DT507621 WS02418.BR_M07 PTxD-ICC-N-A-14 Popul... 50 3e-004
gb|DT512249.1|DT512249 WS02418.B21_M07 PTxD-ICC-N-A-14 Popu... 50 3e-004
gb|DV464251.1|DV464251 MTUNUL1.P25.B03 NUL Populus fremonti... 50 3e-004
gb|DV466380.1|DV466380 MTUNUL1.P5.H07 NUL Populus fremontii... 50 3e-004
gb|BU865208.1|BU865208 S050E03 Populus imbibed seed cDNA li... 48 0.001
gb|BU896302.1|BU896302 X038F04 Populus wood cDNA library Po... 48 0.001
gb|BU825111.1|BU825111 UK103TG08 Populus apical shoot cDNA ... 46 0.005
gb|BU829726.1|BU829726 K047P03P Populus apical shoot cDNA l... 46 0.005
gb|CK092925.1|CK092925 G100P51.3pR Populus tension wood cDN... 46 0.005
gb|CK318755.1|CK318755 X9P03a06 Populus stem seasonal libra... 46 0.005
gb|AJ767655.1|AJ767655 AJ767655 Populus euphratica leaf adu... 46 0.005
gb|AJ777976.1|AJ777976 AJ777976 Populus euphratica root 3-6... 46 0.005
gb|CV241524.1|CV241524 WS02512.B21_H08 PT-MB-N-A-15 Populus... 46 0.005
gb|DN490231.1|DN490231 UK103TG08.3pR Populus apical shoot c... 46 0.005
gb|DN500202.1|DN500202 UK103TG08.5pR Populus apical shoot c... 46 0.005
gb|DT490171.1|DT490171 WS02544.B21_D18 PT-MB-N-A-15 Populus... 46 0.005
gb|BI125336.1|BI125336 I059P20P Populus leaf cDNA library P... 44 0.019
gb|BI129500.1|BI129500 G091P55Y Populus cambium cDNA librar... 44 0.019
gb|CK319373.1|CK319373 X9P10a06 Populus stem seasonal libra... 44 0.019
gb|CV229479.1|CV229479 WS01913.B21_G24 PT-DX-N-A-10 Populus... 44 0.019
gb|DN494124.1|DN494124 I084P68.5pR Populus senescing leaves... 44 0.019
gb|AI166983.1|AI166983 xylem.est.761 Poplar xylem Lambda ZA... 42 0.075
gb|BU868052.1|BU868052 M110F05 Populus flower cDNA library ... 42 0.075
gb|BU868372.1|BU868372 M114F09 Populus flower cDNA library ... 42 0.075
gb|BU875371.1|BU875371 V006B08 Populus flower cDNA library ... 42 0.075
gb|BU876267.1|BU876267 V018F01 Populus flower cDNA library ... 42 0.075
gb|CA821395.1|CA821395 RSH02D02 two-month-old roots from cl... 42 0.075
gb|CF233428.1|CF233428 PtaJXO0023D3D0307 Poplar cDNA librar... 42 0.075
gb|CN550479.1|CN550479 GQ0244.B3_A10 GQ024 Populus trichoca... 42 0.075
gb|AJ778211.1|AJ778211 AJ778211 Populus euphratica root 3-6... 42 0.075
gb|CV239238.1|CV239238 WS0231.B21_M09 PT-MB-A-13 Populus tr... 42 0.075
gb|CV239608.1|CV239608 WS0232.B21_O23 PT-MB-A-13 Populus tr... 42 0.075
gb|CV247792.1|CV247792 WS01119.B21_F18 PT-P-FL-A-2 Populus ... 42 0.075
gb|CV247922.1|CV247922 WS01119.B21_M18 PT-P-FL-A-2 Populus ... 42 0.075
gb|CV267231.1|CV267231 WS02031.B21_D01 PTxN-IB-N-A-11 Popul... 42 0.075
gb|BP922572.1|BP922572 BP922572 full-length enriched poplar... 42 0.075
gb|BP926617.1|BP926617 BP926617 full-length enriched poplar... 42 0.075
gb|DT473248.1|DT473248 WS01229.BR_A22 PT-GT-FL-A-3 Populus ... 42 0.075
gb|DT475004.1|DT475004 WS0125.BR_L02 PT-GT-FL-A-3 Populus t... 42 0.075
gb|DT475523.1|DT475523 WS0127.BR_G03 PT-GT-FL-A-3 Populus t... 42 0.075
gb|DT476293.1|DT476293 WS01229.B21_A22 PT-GT-FL-A-3 Populus... 42 0.075
gb|DT494758.1|DT494758 WS01119.BR_F18 PT-P-FL-A-2 Populus t... 42 0.075
gb|DT494911.1|DT494911 WS01119.BR_M18 PT-P-FL-A-2 Populus t... 42 0.075
gb|AI167100.1|AI167100 xylem.est.867 Poplar xylem Lambda ZA... 40 0.30
gb|BU823669.1|BU823669 UB55BPC01 Populus tremula cambium cD... 40 0.30
gb|BU828666.1|BU828666 K026P56P Populus apical shoot cDNA l... 40 0.30
gb|BU832563.1|BU832563 T035E06 Populus apical shoot cDNA li... 40 0.30
gb|BU835120.1|BU835120 T069G10 Populus apical shoot cDNA li... 40 0.30
gb|BU867587.1|BU867587 M102A04 Populus flower cDNA library ... 40 0.30
gb|BU867996.1|BU867996 M106H03 Populus flower cDNA library ... 40 0.30
gb|BU880150.1|BU880150 UM42TA11 Populus flower cDNA library... 40 0.30
gb|BU886866.1|BU886866 R051E08 Populus root cDNA library Po... 40 0.30
gb|BU893835.1|BU893835 P083C12 Populus petioles cDNA librar... 40 0.30
gb|BU893909.1|BU893909 P084C12 Populus petioles cDNA librar... 40 0.30
gb|CA823126.1|CA823126 R21C01 two-month-old roots from clon... 40 0.30
gb|CK097577.1|CK097577 UB55BPC01.3pR Populus active cambium... 40 0.30
gb|CK107375.1|CK107375 UB55BPC01.5pR Populus active cambium... 40 0.30
gb|CK110404.1|CK110404 N056F05 Populus bark cDNA library Po... 40 0.30
gb|AJ780711.1|AJ780711 AJ780711 Populus euphratica leaf 3-6... 40 0.30
gb|AJ780811.1|AJ780811 AJ780811 Populus euphratica leaf 3-6... 40 0.30
gb|CV229899.1|CV229899 WS01914.B21_M17 PT-DX-N-A-10 Populus... 40 0.30
gb|CV229971.1|CV229971 WS01915.B21_A15 PT-DX-N-A-10 Populus... 40 0.30
gb|CV234783.1|CV234783 WS01216.B21_E17 PT-GT-FL-A-3 Populus... 40 0.30
gb|CV235235.1|CV235235 WS01218.B21_E23 PT-GT-FL-A-3 Populus... 40 0.30
gb|CV235634.1|CV235634 WS0122.B21_O24 PT-GT-FL-A-3 Populus ... 40 0.30
gb|CV238910.1|CV238910 WS0128.B21.1_J15 PT-GT-FL-A-3 Populu... 40 0.30
gb|CV241343.1|CV241343 WS02511.B21_O20 PT-MB-N-A-15 Populus... 40 0.30
gb|CV248120.1|CV248120 WS0112.B21_H24 PT-P-FL-A-2 Populus t... 40 0.30
gb|CV264288.1|CV264288 WS02024.B21_C02 PTxN-IB-N-A-11 Popul... 40 0.30
gb|CV270744.1|CV270744 WS0152.B21_M24 PTxN-IB-A-6 Populus t... 40 0.30
gb|CV274620.1|CV274620 WS0173.B21_N23 PTxD-NR-A-8 Populus t... 40 0.30
gb|CV274648.1|CV274648 WS0173.B21_P07 PTxD-NR-A-8 Populus t... 40 0.30
gb|CV281519.1|CV281519 WS0182.B21_C08 PTxD-IL-N-A-9 Populus... 40 0.30
gb|CV282972.1|CV282972 WS0186.B21_B13 PTxD-IL-N-A-9 Populus... 40 0.30
gb|CF936761.1|CF936761 PO3009H11 Populus tomentiglandulosa ... 40 0.30
gb|CX170137.1|CX170137 F06_69-114_12.ab1 leaf inoculated wi... 40 0.30
gb|CX174709.1|CX174709 E04_69-45_10.ab1 leaf inoculated wit... 40 0.30
gb|CX183128.1|CX183128 H04_45-50_16.ab1 leaf inoculated wit... 40 0.30
gb|CX185176.1|CX185176 G06_45-82_14.ab1 leaf inoculated wit... 40 0.30
gb|DN486279.1|DN486279 P013D03.3pR Populus petioles cDNA li... 40 0.30
gb|DN499229.1|DN499229 T035E06.5pR Populus shoot meristem c... 40 0.30
gb|DT475903.1|DT475903 WS0128.BR_J15 PT-GT-FL-A-3 Populus t... 40 0.30
gb|DT476355.1|DT476355 WS01229.B21_E11 PT-GT-FL-A-3 Populus... 40 0.30
gb|DT491642.1|DT491642 WS02548.C21_F14 PT-MB-N-A-15 Populus... 40 0.30
gb|DT516610.1|DT516610 WS02431.B21_O11 PTxD-ICC-N-A-14 Popu... 40 0.30
gb|DT520462.1|DT520462 WS02447.B21_J23 PTxD-ICC-N-A-14 Popu... 40 0.30
gb|DV463190.1|DV463190 MTUNUL1.P12.H02 NUL Populus fremonti... 40 0.30
>gb|CA933080.1|CA933080 MTU5CS.P3.C02 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 554
Score = 105 bits (53), Expect = 6e-021
Identities = 122/145 (84%)
Strand = Plus / Plus
Query: 511 tcatgggggcagcagctgtagtgatcgtcgcagcaggtggcgccctcgagcgggcagcag 570
||||||||||||||||| || || || || ||||||||||| |||||||| ||||||||
Sbjct: 1 tcatgggggcagcagctataatggtcatcacagcaggtggcaccctcgagggggcagcat 60
Query: 571 ccccaggcgaagcagtacttgccgtactcgtagatgcagcagcaggtggtgctgtcaggg 630
||||| || ||||| ||||| || |||||| ||||||||||||| || |||| ||||||
Sbjct: 61 ccccatgcaaagcaatactttccatactcgaagatgcagcagcaagtattgctatcaggg 120
Query: 631 cacgagtagtagttgtcgcacacgg 655
|| ||| |||| || || |||||||
Sbjct: 121 caggaggagtaattatcacacacgg 145
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 802 ccccagctgctgccccatgagttcttcacgatccagtagtccttgccgttctctgtcccg 861
|||||||| |||||||||||||| |||| ||||||||||| || || || || || |||
Sbjct: 292 ccccagctcttgccccatgagttcctcacaatccagtagtctttacccttttcagttccg 351
Query: 862 tagccgacggccgtgacaccatggtccag 890
|| || ||||| | ||||||||||||||
Sbjct: 352 taacccacggcagcaacaccatggtccag 380
>gb|CA934441.1|CA934441 MTU3TS.P7.F07 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 551
Score = 105 bits (53), Expect = 6e-021
Identities = 122/145 (84%)
Strand = Plus / Plus
Query: 511 tcatgggggcagcagctgtagtgatcgtcgcagcaggtggcgccctcgagcgggcagcag 570
||||||||||||||||| || || || || ||||||||||| |||||||| ||||||||
Sbjct: 1 tcatgggggcagcagctataatggtcatcacagcaggtggcaccctcgagggggcagcat 60
Query: 571 ccccaggcgaagcagtacttgccgtactcgtagatgcagcagcaggtggtgctgtcaggg 630
||||| || ||||| ||||| | |||||| |||||||||||||||| |||| ||||||
Sbjct: 61 ccccatgcaaagcaatactttgcatactcgaagatgcagcagcaggtattgctatcaggg 120
Query: 631 cacgagtagtagttgtcgcacacgg 655
|| ||| |||| || || |||||||
Sbjct: 121 caggagaagtaattatcacacacgg 145
>gb|CX655058.1|CX655058 PO01004C10 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01004C10 5', mRNA sequence
Length = 528
Score = 103 bits (52), Expect = 2e-020
Identities = 118/140 (84%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 181 acgttgcagactgggtactcatgtgggcagcagctataatggtcatcacagcaggtggca 122
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || |||||| |||||||||||
Sbjct: 121 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcgaagatgcagcag 62
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 61 caagtattgctatcagggca 42
>gb|CX655331.1|CX655331 PO02033D03 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02033D03 5', mRNA sequence
Length = 574
Score = 103 bits (52), Expect = 2e-020
Identities = 118/140 (84%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 345 acgttgcagactgggtactcatgtgggcagcagctataatggtcatcacagcaggtggca 286
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || |||||| |||||||||||
Sbjct: 285 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcgaagatgcagcag 226
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 225 caagtattgctatcagggca 206
Score = 40.1 bits (20), Expect = 0.30
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 802 ccccagctgctgccccatgagttcttcacgatccag 837
|||||||| |||||||||||||| |||| ||||||
Sbjct: 36 ccccagctcttgccccatgagttcctcacaatccag 1
>gb|CX658203.1|CX658203 PO01011B09 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01011B09 5', mRNA sequence
Length = 630
Score = 103 bits (52), Expect = 2e-020
Identities = 118/140 (84%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 471 acgttgcagactgggtactcatgtgggcagcagctataatggtcatcacagcaggtggca 412
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || |||||| |||||||||||
Sbjct: 411 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcgaagatgcagcag 352
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 351 caagtattgctatcagggca 332
Score = 50.1 bits (25), Expect = 3e-004
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 802 ccccagctgctgccccatgagttcttcacgatccagtagtccttgccgttctctgtcccg 861
|||||||| |||||||||||||| |||| ||||||||||| || || || || || |||
Sbjct: 162 ccccagctcttgccccatgagttcctcacaatccagtagtctttacccttttcagttccg 103
Query: 862 tagccgacggccgtgacaccatggtccag 890
|| || ||||| | || |||||||||||
Sbjct: 102 taacccacggcagcaacgccatggtccag 74
>gb|CX659587.1|CX659587 PO01032E03 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01032E03 5', mRNA sequence
Length = 654
Score = 103 bits (52), Expect = 2e-020
Identities = 118/140 (84%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 186 acgttgcagactgggtactcatgtgggcagcagctataatggtcatcacagcaggtggca 127
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || |||||| |||||||||||
Sbjct: 126 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcgaagatgcagcag 67
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 66 caagtattgctatcagggca 47
>gb|CV231036.1|CV231036 WS0193.B21_F18 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0193_F18 3', mRNA sequence
Length = 697
Score = 101 bits (51), Expect = 9e-020
Identities = 135/163 (82%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 218 acgttgcagactgggtaatcatgtgggcagcagctataatggtcatcacagcaggtggca 159
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 158 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 99
Query: 613 caggtggtgctgtcagggcacgagtagtagttgtcgcacacgg 655
|| || |||| |||||||| || |||| || ||||||||||
Sbjct: 98 caagtactgctatcagggcaggaaaagtaattatcgcacacgg 56
>gb|CV260860.1|CV260860 WS02015.B21_D06 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02015_D06 3', mRNA sequence
Length = 674
Score = 101 bits (51), Expect = 9e-020
Identities = 135/163 (82%)
Strand = Plus / Plus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 456 acgttgcagactgggtactcatgtgggcagcagctataatggtcatcacagcaggtggca 515
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 516 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 575
Query: 613 caggtggtgctgtcagggcacgagtagtagttgtcgcacacgg 655
|| || |||| |||||||| || |||| ||||| |||||||
Sbjct: 576 caagtactgctatcagggcaggaaaagtaattgtcacacacgg 618
>gb|CV266526.1|CV266526 WS0203.B21_E10 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0203_E10 3', mRNA sequence
Length = 694
Score = 101 bits (51), Expect = 9e-020
Identities = 135/163 (82%)
Strand = Plus / Plus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 498 acgttgcagactgggtactcatgtgggcagcagctataatggtcatcacagcaggtggca 557
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 558 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 617
Query: 613 caggtggtgctgtcagggcacgagtagtagttgtcgcacacgg 655
|| || |||| |||||||| || |||| ||||| |||||||
Sbjct: 618 caagtactgctatcagggcaggaaaagtaattgtcacacacgg 660
>gb|CX180900.1|CX180900 D09_45-15_07.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 695
Score = 101 bits (51), Expect = 9e-020
Identities = 135/163 (82%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 406 acgttgcagactgggtactcatgtgggcagcagctataatggtcatcacagcaggtggca 347
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 346 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 287
Query: 613 caggtggtgctgtcagggcacgagtagtagttgtcgcacacgg 655
|| || |||| |||||||| || |||| ||||| |||||||
Sbjct: 286 caagtactgctatcagggcaggaaaagtaattgtcacacacgg 244
Score = 50.1 bits (25), Expect = 3e-004
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 802 ccccagctgctgccccatgagttcttcacgatccagtagtccttgccgttctctgtcccg 861
|||||||| |||||||||||||| |||| |||||||| || || || || || || |||
Sbjct: 97 ccccagctcttgccccatgagttcctcacaatccagtaatctttacccttttcagttccg 38
Query: 862 tagccgacggccgtgacaccatggtccag 890
|| || ||||| | ||||||||||||||
Sbjct: 37 taacccacggcagcaacaccatggtccag 9
>gb|BI122528.1|BI122528 I008P49P Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 433
Score = 99.6 bits (50), Expect = 4e-019
Identities = 104/122 (85%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || ||||| |||||||||||
Sbjct: 384 acgttgcagactgggtactcatgtgggcagcagctataatggtcgtcacagcaggtggca 325
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| | ||||| ||||| || |||||| |||||||||||
Sbjct: 324 ccctcgagggggcagcatccccatgaaaagcaatactttccatactcgaagatgcagcag 265
Query: 613 ca 614
||
Sbjct: 264 ca 263
Score = 54.0 bits (27), Expect = 2e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 802 ccccagctgctgccccatgagttcttcacgatccagtagtccttgccgttctctgtcccg 861
|||||||| |||||||||||||| |||| ||||||||||| || ||||| || || |||
Sbjct: 75 ccccagctcttgccccatgagttcctcacaatccagtagtctttaccgttttcagttccg 16
Query: 862 tagccgacggc 872
|| || |||||
Sbjct: 15 taacccacggc 5
>gb|BI123801.1|BI123801 I029P03P Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 434
Score = 99.6 bits (50), Expect = 4e-019
Identities = 104/122 (85%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || ||||| |||||||||||
Sbjct: 178 acgttgcagactgggtactcatgtgggcagcagctataatggtcgtcacagcaggtggca 119
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| | ||||| ||||| || |||||| |||||||||||
Sbjct: 118 ccctcgagggggcagcatccccatgaaaagcaatactttccatactcgaagatgcagcag 59
Query: 613 ca 614
||
Sbjct: 58 ca 57
>gb|BU871743.1|BU871743 Q033H09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 346
Score = 99.6 bits (50), Expect = 4e-019
Identities = 104/122 (85%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || ||||| |||||||||||
Sbjct: 343 acgttgcagactgggtactcatgtgggcagcagctataatggtcgtcacagcaggtggca 284
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| | ||||| ||||| || |||||| |||||||||||
Sbjct: 283 ccctcgagggggcagcatccccatgaaaagcaatactttccatactcgaagatgcagcag 224
Query: 613 ca 614
||
Sbjct: 223 ca 222
>gb|BU809545.1|BU809545 UL59TB06 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 560
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||||||||||||||| || || || || |||||||||||
Sbjct: 395 acgttgcagactgggtactcatgggggcagcagctataatggtcatcacagcaggtggca 336
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| | || || ||||| || |||||| |||||||||||
Sbjct: 335 ccctcgagtgggcagcatccccatgaaaaacaatactttccatactcgaagatgcagcag 276
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 275 caagtattgctatcagggca 256
Score = 54.0 bits (27), Expect = 2e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 802 ccccagctgctgccccatgagttcttcacgatccagtagtccttgccgttctctgtcccg 861
|||||||| |||||||||||||| |||| ||||||||||| || ||||| || || |||
Sbjct: 86 ccccagctcttgccccatgagttcctcacaatccagtagtctttaccgttttcagttccg 27
Query: 862 tagccgacggc 872
|| || |||||
Sbjct: 26 taacccacggc 16
>gb|BU810606.1|BU810606 UL73PA11 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 447
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| || || ||||||||||| || || || || |||||||||||
Sbjct: 263 acgttgcagactgggtactcgtgtgggcagcagctataatggtcatcacagcaggtggca 204
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || |||||| |||||||||||
Sbjct: 203 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcgaagatgcagcag 144
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 143 caagtattgctatcagggca 124
>gb|BU881920.1|BU881920 UM69TC10 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 553
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 314 acgttgcagactgggtactcatgtgggcagcagctataatggtcatcacagcaggtggca 255
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 254 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 195
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 194 caagtactgctatcagggca 175
>gb|BU882161.1|BU882161 UM73TD09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 561
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 286 acgttgcagactgggtactcatgtgggcagcagctataatggtcatcacagcaggtggca 227
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 226 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 167
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 166 caagtactgctatcagggca 147
>gb|BU895952.1|BU895952 X033E01 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 577
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||||||||||||||| || || || || |||||||||||
Sbjct: 398 acgttgcagactgggtactcatgggggcagcagctataatggtcatcacagcaggtggca 339
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| | || || ||||| || |||||| |||||||||||
Sbjct: 338 ccctcgagtgggcagcatccccatgaaaaacaatactttccatactcgaagatgcagcag 279
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 278 caagtattgctatcagggca 259
Score = 54.0 bits (27), Expect = 2e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 802 ccccagctgctgccccatgagttcttcacgatccagtagtccttgccgttctctgtcccg 861
|||||||| |||||||||||||| |||| ||||||||||| || ||||| || || |||
Sbjct: 89 ccccagctcttgccccatgagttcctcacaatccagtagtctttaccgttttcagttccg 30
Query: 862 tagccgacggc 872
|| || |||||
Sbjct: 29 taacccacggc 19
>gb|CA924446.1|CA924446 MTU7CL.P5.G07 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 554
Score = 95.6 bits (48), Expect = 6e-018
Identities = 90/104 (86%)
Strand = Plus / Plus
Query: 511 tcatgggggcagcagctgtagtgatcgtcgcagcaggtggcgccctcgagcgggcagcag 570
||||||||||||||||| || || || || ||||||||||| |||||||| ||||||||
Sbjct: 1 tcatgggggcagcagctataatggtcatcacagcaggtggcaccctcgagtgggcagcat 60
Query: 571 ccccaggcgaagcagtacttgccgtactcgtagatgcagcagca 614
||||| || ||||| ||||| || |||||| |||||||||||||
Sbjct: 61 ccccacgcaaagcaatactttccatactcgaagatgcagcagca 104
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 802 ccccagctgctgccccatgagttcttcacgatccagtagtccttgccgttctctgtcccg 861
|||||||| |||||||||||||| |||| ||||||||||| || || || || || |||
Sbjct: 292 ccccagctcttgccccatgagttcctcacaatccagtagtctttacccttttcagttccg 351
Query: 862 tagccgacggccgtgacaccatggtccag 890
|| || ||||| | ||||||||||||||
Sbjct: 352 taacccacggcagcaacaccatggtccag 380
>gb|CA934191.1|CA934191 MTU3TS.P4.C12 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 554
Score = 95.6 bits (48), Expect = 6e-018
Identities = 90/104 (86%)
Strand = Plus / Plus
Query: 511 tcatgggggcagcagctgtagtgatcgtcgcagcaggtggcgccctcgagcgggcagcag 570
||||||||||||||||| || || || || ||||||||||| |||||||| ||||||||
Sbjct: 1 tcatgggggcagcagctataatggtcatcacagcaggtggcaccctcgagtgggcagcat 60
Query: 571 ccccaggcgaagcagtacttgccgtactcgtagatgcagcagca 614
||||| || ||||| ||||| || |||||| |||||||||||||
Sbjct: 61 ccccatgcaaagcaatactttccatactcgaagatgcagcagca 104
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 802 ccccagctgctgccccatgagttcttcacgatccagtagtccttgccgttctctgtcccg 861
|||||||| |||||||||||||| |||| ||||||||||| || || || || || |||
Sbjct: 292 ccccagctcttgccccatgagttcctcacaatccagtagtctttacccttttcagttccg 351
Query: 862 tagccgacggccgtgacaccatggtccag 890
|| || ||||| | ||||||||||||||
Sbjct: 352 taacccacggcagcaacaccatggtccag 380
>gb|CA822112.1|CA822112 R03H07 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 520
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 336 acgttgcagactgggtaatcatgtgggcagcagctataatggtcatcacagcaggtggca 277
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 276 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 217
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 216 caagtactgctatcagggca 197
>gb|CK110308.1|CK110308 N055E03 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA clone N055E03 5', mRNA sequence
Length = 473
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||||||||||||||| || || || || |||||||||||
Sbjct: 338 acgttgcagactgggtactcatgggggcagcagctataatggtcatcacagcaggtggca 279
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| | || || ||||| || |||||| |||||||||||
Sbjct: 278 ccctcgagtgggcagcatccccatgaaaaacaatactttccatactcgaagatgcagcag 219
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 218 caagtattgctatcagggca 199
>gb|CN519842.1|CN519842 GQ0105.B3_O07 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0105_O07 5', mRNA sequence
Length = 634
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 222 acgttgcagactgggtaatcatgtgggcagcagctataatggtcatcacagcaggtggca 163
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 162 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 103
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 102 caagtactgctatcagggca 83
>gb|CN520813.1|CN520813 GQ0105.B3_I19 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0105_I19 5', mRNA sequence
Length = 822
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 478 acgttgcagactgggtaatcatgtgggcagcagctataatggtcatcacagcaggtggca 537
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 538 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 597
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 598 caagtactgctatcagggca 617
>gb|CN521628.1|CN521628 GQ0111.B3_K06 GQ011 Populus trichocarpa x Populus deltoides cDNA
clone GQ0111_K06 5', mRNA sequence
Length = 508
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 181 acgttgcagactgggtaatcatgtgggcagcagctataatggtcatcacagcaggtggca 122
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 121 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 62
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 61 caagtactgctatcagggca 42
>gb|CN523716.1|CN523716 GQ015M11.T3_F07 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M11_F07 5', mRNA sequence
Length = 762
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 317 acgttgcagactgggtaatcatgtgggcagcagctataatggtcatcacagcaggtggca 258
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 257 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 198
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 197 caagtactgctatcagggca 178
>gb|CN524033.1|CN524033 GQ015M07.T3_H08 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M07_H08 5', mRNA sequence
Length = 788
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 304 acgttgcagactgggtaatcatgtgggcagcagctataatggtcatcacagcaggtggca 245
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 244 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 185
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 184 caagtactgctatcagggca 165
>gb|CN524463.1|CN524463 GQ015M14.T3_C06 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M14_C06 5', mRNA sequence
Length = 810
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 413 acgttgcagactgggtaatcatgtgggcagcagctataatggtcatcacagcaggtggca 354
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 353 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 294
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 293 caagtactgctatcagggca 274
>gb|CK319047.1|CK319047 X9P06c10 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 680
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 265 acgttgcagactgggtaatcatgtgggcagcagctataatggtcatcacagcaggtggca 206
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 205 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 146
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 145 caagtactgctatcagggca 126
>gb|CK319328.1|CK319328 X9P09e05 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 686
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 467 acgttgcagactgggtaatcatgtgggcagcagctataatggtcatcacagcaggtggca 408
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 407 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 348
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 347 caagtactgctatcagggca 328
>gb|CK319666.1|CK319666 B9SP07g11 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 474
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 349 acgttgcagactgggtaatcatgtgggcagcagctataatggtcatcacagcaggtggca 290
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 289 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 230
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 229 caagtactgctatcagggca 210
>gb|AJ767787.1|AJ767787 AJ767787 Populus euphratica leaf adult Populus euphratica cDNA
clone P0000100010D08F1, mRNA sequence
Length = 581
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 415 acgttgcagactgggtaatcatgtgggcagcagctataatggtcatcacagcaggtggca 356
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 355 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 296
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 295 caagtattgctatcagggca 276
Score = 42.1 bits (21), Expect = 0.075
Identities = 72/89 (80%)
Strand = Plus / Minus
Query: 802 ccccagctgctgccccatgagttcttcacgatccagtagtccttgccgttctctgtcccg 861
|||||||| |||||||||||||| | || |||||||| || || || || || || |||
Sbjct: 106 ccccagctcttgccccatgagttcctaacaatccagtaatctttacccttttcagttccg 47
Query: 862 tagccgacggccgtgacaccatggtccag 890
|| || ||||| | ||||||||||||||
Sbjct: 46 taacccacggcagcaacaccatggtccag 18
>gb|AJ768807.1|AJ768807 AJ768807 Populus euphratica leaf adult Populus euphratica cDNA
clone P0000100022A07F1, mRNA sequence
Length = 609
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 329 acgttgcagactgggtaatcatgtgggcagcagctataatggtcatcacagcaggtggca 270
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 269 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 210
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 209 caagtattgctatcagggca 190
>gb|CV130762.1|CV130762 B9SP10e02 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 867
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 390 acgttgcagactgggtaatcatgtgggcagcagctataatggtcatcacagcaggtggca 331
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 330 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 271
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 270 caagtactgctatcagggca 251
>gb|CV131869.1|CV131869 L4P01c08 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 790
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 383 acgttgcagactgggtaatcatgtgggcagcagctataatggtcatcacagcaggtggca 324
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 323 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 264
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 263 caagtactgctatcagggca 244
>gb|CV225639.1|CV225639 WS0161.B21_P17 PT-DX-A-7 Populus trichocarpa cDNA clone WS0161_P17
3', mRNA sequence
Length = 683
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 498 acgttgcagactgggtactcatgtgggcagcagctataatggtcatcacagcaggtggca 557
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 558 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 617
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 618 caagtactgctatcagggca 637
>gb|CV225683.1|CV225683 WS0162.B21_B18 PT-DX-A-7 Populus trichocarpa cDNA clone WS0162_B18
3', mRNA sequence
Length = 792
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 496 acgttgcagactgggtaatcatgtgggcagcagctataatggtcatcacagcaggtggca 555
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 556 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 615
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 616 caagtactgctatcagggca 635
>gb|CV226542.1|CV226542 WS0164.B21_J05 PT-DX-A-7 Populus trichocarpa cDNA clone WS0164_J05
3', mRNA sequence
Length = 728
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 496 acgttgcagactgggtaatcatgtgggcagcagctataatggtcatcacagcaggtggca 555
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 556 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 615
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 616 caagtactgctatcagggca 635
>gb|CV227887.1|CV227887 WS0168.B21_I02 PT-DX-A-7 Populus trichocarpa cDNA clone WS0168_I02
3', mRNA sequence
Length = 797
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 500 acgttgcagactgggtactcatgtgggcagcagctataatggtcatcacagcaggtggca 559
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 560 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 619
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 620 caagtactgctatcagggca 639
>gb|CV235059.1|CV235059 WS01217.B21_I08 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01217_I08 3', mRNA sequence
Length = 693
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 497 acgttgcagactgggtactcatgtgggcagcagctataatggtcatcacagcaggtggca 556
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 557 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 616
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 617 caagtactgctatcagggca 636
>gb|CV237275.1|CV237275 WS01227.B21.1_D07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01227_D07 3', mRNA sequence
Length = 797
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 526 acgttgcagactgggtactcatgtgggcagcagctataatggtcatcacagcaggtggca 585
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 586 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 645
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 646 caagtactgctatcagggca 665
>gb|CV243884.1|CV243884 WS0253.B21_C02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0253_C02 3', mRNA sequence
Length = 706
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 428 acgttgcagactgggtactcatgtgggcagcagctataatggtcatcacagcaggtggca 487
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 488 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 547
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 548 caagtactgctatcagggca 567
>gb|CV248379.1|CV248379 WS01120.B21_I05 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01120_I05 3', mRNA sequence
Length = 681
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 429 acgttgcagactgggtactcatgtgggcagcagctataatggtcatcacagcaggtggca 488
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 489 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 548
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 549 caagtactgctatcagggca 568
>gb|CV259366.1|CV259366 WS02011.B21_C18 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02011_C18 3', mRNA sequence
Length = 732
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 580 acgttgcagactgggtactcatgtgggcagcagctataatggtcatcacagcaggtggca 639
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 640 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 699
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 700 caagtactgctatcagggca 719
>gb|CV263865.1|CV263865 WS02022.B21_P21 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02022_P21 3', mRNA sequence
Length = 958
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 548 acgttgcagactgggtactcatgtgggcagcagctataatggtcatcacagcaggtggca 489
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 488 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 429
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 428 caagtactgctatcagggca 409
Score = 50.1 bits (25), Expect = 3e-004
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 802 ccccagctgctgccccatgagttcttcacgatccagtagtccttgccgttctctgtcccg 861
|||||||| |||||||||||||| |||| |||||||| || || || || || || |||
Sbjct: 239 ccccagctcttgccccatgagttcctcacaatccagtaatctttacccttttcagttccg 180
Query: 862 tagccgacggccgtgacaccatggtccag 890
|| || ||||| | ||||||||||||||
Sbjct: 179 taacccacggcagcaacaccatggtccag 151
>gb|CV266199.1|CV266199 WS02029.B21_F23 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02029_F23 3', mRNA sequence
Length = 735
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 502 acgttgcagactgggtactcatgtgggcagcagctataatggtcatcacagcaggtggca 561
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 562 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 621
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 622 caagtactgctatcagggca 641
>gb|CV268617.1|CV268617 WS0205.B21_P18 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0205_P18 3', mRNA sequence
Length = 694
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 498 acgttgcagactgggtactcatgtgggcagcagctataatggtcatcacagcaggtggca 557
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 558 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 617
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 618 caagtactgctatcagggca 637
>gb|CV273941.1|CV273941 WS01712.B21_K24 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS01712_K24 3', mRNA sequence
Length = 676
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 431 acgttgcagactgggtactcatgtgggcagcagctataatggtcatcacagcaggtggca 490
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 491 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 550
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 551 caagtactgctatcagggca 570
>gb|CV279423.1|CV279423 WS0131.B21_L05 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0131_L05 3', mRNA sequence
Length = 686
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 326 acgttgcagactgggtactcatgtgggcagcagctataatggtcatcacagcaggtggca 385
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 386 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 445
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 446 caagtactgctatcagggca 465
Score = 44.1 bits (22), Expect = 0.019
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 802 ccccagctgctgccccatgagttcttcacgatccagta 839
|||||||| |||||||||||||| |||| ||||||||
Sbjct: 635 ccccagctcttgccccatgagttcctcacaatccagta 672
>gb|CV282978.1|CV282978 WS0186.B21_B19 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0186_B19 3', mRNA sequence
Length = 761
Score = 95.6 bits (48), Expect = 6e-018
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 493 acgttgcagatggggtagtcatgggggcagcagctgtagtgatcgtcgcagcaggtggcg 552
|||||||||| ||||| ||||| ||||||||||| || || || || |||||||||||
Sbjct: 507 acgttgcagactgggtactcatgtgggcagcagctataatggtcatcacagcaggtggca 566
Query: 553 ccctcgagcgggcagcagccccaggcgaagcagtacttgccgtactcgtagatgcagcag 612
|||||||| |||||||| ||||| || ||||| ||||| || ||||| |||||||||||
Sbjct: 567 ccctcgagtgggcagcatccccatgcaaagcaatactttccatactcaaagatgcagcag 626
Query: 613 caggtggtgctgtcagggca 632
|| || |||| ||||||||
Sbjct: 627 caagtactgctatcagggca 646
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 175,748
Number of Sequences: 369679
Number of extensions: 175748
Number of successful extensions: 57413
Number of sequences better than 0.5: 204
Number of HSP's better than 0.5 without gapping: 202
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 56882
Number of HSP's gapped (non-prelim): 461
length of query: 1862
length of database: 203,408,664
effective HSP length: 20
effective length of query: 1842
effective length of database: 196,015,084
effective search space: 361059784728
effective search space used: 361059784728
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)