BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2455940.2.2
(1190 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF240466.1|AF240466 Populus tomentosa caffeoyl-CoA O-met... 76 3e-012
gb|CF233831.1|CF233831 PtaJXO0028B1B0103 Poplar cDNA librar... 74 1e-011
gb|BU867666.1|BU867666 M102H06 Populus flower cDNA library ... 72 5e-011
gb|CV243032.1|CV243032 WS02516.B21.1_L10 PT-MB-N-A-15 Popul... 72 5e-011
gb|DT495487.1|DT495487 WS01120.BR_J21 PT-P-FL-A-2 Populus t... 72 5e-011
gb|DT497978.1|DT497978 WS0114.BR_A10 PT-P-FL-A-2 Populus tr... 72 5e-011
gb|BU826927.1|BU826927 UK126TD12 Populus apical shoot cDNA ... 68 8e-010
gb|BU888753.1|BU888753 P012B02 Populus petioles cDNA librar... 68 8e-010
gb|BU892643.1|BU892643 P066E08 Populus petioles cDNA librar... 68 8e-010
gb|BU897199.1|BU897199 X053A04 Populus wood cDNA library Po... 68 8e-010
gb|CA821361.1|CA821361 RSH01H05 two-month-old roots from cl... 68 8e-010
gb|CF227474.1|CF227474 PtaD6D5D0507 Poplar cDNA library fro... 68 8e-010
gb|CF229708.1|CF229708 PtaXM0028F3F0311 Poplar cDNA library... 68 8e-010
gb|CF233240.1|CF233240 PtaJXO0020H6H0616 Poplar cDNA librar... 68 8e-010
gb|CF233668.1|CF233668 PtaJXO0026C3C0305 Poplar cDNA librar... 68 8e-010
gb|CF236789.1|CF236789 PtaJXT7B9B0903 Poplar cDNA library f... 68 8e-010
gb|CF236848.1|CF236848 PtaJXT7H9H0915 Poplar cDNA library f... 68 8e-010
gb|CN549757.1|CN549757 GQ0244.B3_K15 GQ024 Populus trichoca... 68 8e-010
gb|CK319292.1|CK319292 X9P09b04 Populus stem seasonal libra... 68 8e-010
gb|CX169215.1|CX169215 F10_69-113_12.ab1 leaf inoculated wi... 68 8e-010
gb|CX660434.1|CX660434 PO01019C11 Poplar SC cDNA library Po... 68 8e-010
gb|DV466046.1|DV466046 MTUNUL1.P46.F06 NUL Populus fremonti... 68 8e-010
gb|U27116.1|PTU27116 Populus tremuloides caffeoyl-CoA 3-O-m... 68 8e-010
emb|AJ130841.1|PBA130841 Populus balsamifera subsp. trichoc... 68 8e-010
gb|CF236064.1|CF236064 PtaJXT0030C12C1206 Poplar cDNA libra... 62 5e-008
gb|AI163274.1|AI163274 A039P05U Hybrid aspen plasmid librar... 60 2e-007
gb|AI166541.1|AI166541 xylem.est.363 Poplar xylem Lambda ZA... 60 2e-007
gb|AI166820.1|AI166820 xylem.est.614 Poplar xylem Lambda ZA... 60 2e-007
gb|CF232683.1|CF232683 PtaJXO0014E2E0210 Poplar cDNA librar... 60 2e-007
gb|AJ769470.1|AJ769470 AJ769470 Populus euphratica leaf 3-6... 60 2e-007
gb|AJ769529.1|AJ769529 AJ769529 Populus euphratica leaf 3-6... 60 2e-007
gb|DN494040.1|DN494040 I063P16.5pR Populus senescing leaves... 60 2e-007
emb|AJ224894.1|PBTAJ4894 Populus balsamifera subsp. trichoc... 60 2e-007
gb|AI162427.1|AI162427 A017P38U Hybrid aspen plasmid librar... 58 8e-007
gb|BI127619.1|BI127619 G063P35Y Populus cambium cDNA librar... 58 8e-007
gb|BI128039.1|BI128039 G070P07Y Populus cambium cDNA librar... 58 8e-007
gb|BI128371.1|BI128371 G074P87Y Populus cambium cDNA librar... 58 8e-007
gb|BI132057.1|BI132057 G130P33Y Populus cambium cDNA librar... 58 8e-007
gb|BU835879.1|BU835879 T079G08 Populus apical shoot cDNA li... 58 8e-007
gb|BU886756.1|BU886756 R050B04 Populus root cDNA library Po... 58 8e-007
gb|BU889313.1|BU889313 P019C08 Populus petioles cDNA librar... 58 8e-007
gb|BU893993.1|BU893993 P085F05 Populus petioles cDNA librar... 58 8e-007
gb|BU894619.1|BU894619 X012C02 Populus wood cDNA library Po... 58 8e-007
gb|BU895719.1|BU895719 X030A08 Populus wood cDNA library Po... 58 8e-007
gb|BU896335.1|BU896335 X039C02 Populus wood cDNA library Po... 58 8e-007
gb|BU897453.1|BU897453 X058B03 Populus wood cDNA library Po... 58 8e-007
gb|CF227858.1|CF227858 PtaXM0005E9E0909 Poplar cDNA library... 58 8e-007
gb|CF229531.1|CF229531 PtaXM0026F11F1111 Poplar cDNA librar... 58 8e-007
gb|CF232267.1|CF232267 PtaJXO0008D10D1008 Poplar cDNA libra... 58 8e-007
gb|CF232502.1|CF232502 PtaJXO0011C4C0406 Poplar cDNA librar... 58 8e-007
gb|CF233249.1|CF233249 PtaJXO0021A4A0402 Poplar cDNA librar... 58 8e-007
gb|CF233271.1|CF233271 PtaJXO0021C6C0606 Poplar cDNA librar... 58 8e-007
gb|CF233750.1|CF233750 PtaJXO0027C11C1105 Poplar cDNA libra... 58 8e-007
gb|CF234341.1|CF234341 Ptajxojxo1D3D0307 Poplar cDNA librar... 58 8e-007
gb|CF235114.1|CF235114 PtaJXT0019A8A0802 Poplar cDNA librar... 58 8e-007
gb|CF236578.1|CF236578 PtaJXT4E5E0509 Poplar cDNA library f... 58 8e-007
gb|DN493609.1|DN493609 G063P85.5pR Populus tension wood cDN... 58 8e-007
gb|CN519508.1|CN519508 GQ0103.B3_P23 GQ010 Populus trichoca... 56 3e-006
gb|BU895633.1|BU895633 X028F06 Populus wood cDNA library Po... 54 1e-005
gb|BU896511.1|BU896511 X041G01 Populus wood cDNA library Po... 54 1e-005
gb|BU898155.1|BU898155 X075F10 Populus wood cDNA library Po... 54 1e-005
gb|AI166316.1|AI166316 xylem.est.160 Poplar xylem Lambda ZA... 52 5e-005
gb|CA824135.1|CA824135 R37B03 two-month-old roots from clon... 52 5e-005
gb|CF233847.1|CF233847 PtaJXO0028C5C0505 Poplar cDNA librar... 52 5e-005
gb|AJ778942.1|AJ778942 AJ778942 Populus euphratica cambium ... 52 5e-005
gb|AF327458.1|AF327458 Populus alba x Populus glandulosa ca... 52 5e-005
gb|BI128448.1|BI128448 G076P15Y Populus cambium cDNA librar... 50 2e-004
gb|BI128592.1|BI128592 G078P66Y Populus cambium cDNA librar... 50 2e-004
gb|BI128675.1|BI128675 G079P90Y Populus cambium cDNA librar... 50 2e-004
gb|BI129335.1|BI129335 G089P30Y Populus cambium cDNA librar... 50 2e-004
gb|BU814263.1|BU814263 N027B09 Populus bark cDNA library Po... 50 2e-004
gb|BU816246.1|BU816246 N062C10 Populus bark cDNA library Po... 50 2e-004
gb|BU887057.1|BU887057 R054A07 Populus root cDNA library Po... 50 2e-004
gb|BU894945.1|BU894945 X017B10 Populus wood cDNA library Po... 50 2e-004
gb|BU895241.1|BU895241 X021B11 Populus wood cDNA library Po... 50 2e-004
gb|BU895561.1|BU895561 X025G10 Populus wood cDNA library Po... 50 2e-004
gb|BU896211.1|BU896211 X037C08 Populus wood cDNA library Po... 50 2e-004
gb|BU897428.1|BU897428 X057F04 Populus wood cDNA library Po... 50 2e-004
gb|BU897810.1|BU897810 X070A10 Populus wood cDNA library Po... 50 2e-004
gb|CK099634.1|CK099634 A078P58.5pR Hybrid aspen plasmid lib... 50 2e-004
gb|DN488120.1|DN488120 R033E06.3pR Populus root cDNA librar... 50 2e-004
gb|DN497801.1|DN497801 R033E06.5pR Populus root cDNA librar... 50 2e-004
gb|BI131426.1|BI131426 G120P71Y Populus cambium cDNA librar... 48 8e-004
gb|CV226183.1|CV226183 WS0163.B21_I13 PT-DX-A-7 Populus tri... 48 8e-004
gb|DT500488.1|DT500488 PX0015.BR_K01 PT-X-FL-A-1 Populus tr... 48 8e-004
gb|AI161842.1|AI161842 A007P68U Hybrid aspen plasmid librar... 44 0.012
gb|AI162256.1|AI162256 A014P71U Hybrid aspen plasmid librar... 44 0.012
gb|AI164538.1|AI164538 A064p08u Hybrid aspen plasmid librar... 44 0.012
gb|AI165676.1|AI165676 A088P66U Hybrid aspen plasmid librar... 44 0.012
gb|AI166314.1|AI166314 xylem.est.159 Poplar xylem Lambda ZA... 44 0.012
gb|AI166464.1|AI166464 xylem.est.294 Poplar xylem Lambda ZA... 44 0.012
gb|BU869356.1|BU869356 M129B05 Populus flower cDNA library ... 44 0.012
gb|BU874994.1|BU874994 V001B12 Populus flower cDNA library ... 44 0.012
gb|BU875316.1|BU875316 V005C03 Populus flower cDNA library ... 44 0.012
gb|BU877332.1|BU877332 V032G08 Populus flower cDNA library ... 44 0.012
gb|BU880028.1|BU880028 UM40TE09 Populus flower cDNA library... 44 0.012
gb|BU880080.1|BU880080 UM41TB11 Populus flower cDNA library... 44 0.012
gb|BU880294.1|BU880294 UM44TA05 Populus flower cDNA library... 44 0.012
gb|BU881459.1|BU881459 UM62TH11 Populus flower cDNA library... 44 0.012
gb|BU881625.1|BU881625 UM65TD03 Populus flower cDNA library... 44 0.012
gb|BU882015.1|BU882015 UM70TE06 Populus flower cDNA library... 44 0.012
gb|BU882154.1|BU882154 UM73TC12 Populus flower cDNA library... 44 0.012
gb|BU882486.1|BU882486 UM77TE08 Populus flower cDNA library... 44 0.012
gb|BU895730.1|BU895730 X030B07 Populus wood cDNA library Po... 44 0.012
gb|BU897247.1|BU897247 X053H07 Populus wood cDNA library Po... 44 0.012
gb|CA821671.1|CA821671 RSH06A03 two-month-old roots from cl... 44 0.012
gb|CA823264.1|CA823264 R23C02 two-month-old roots from clon... 44 0.012
gb|CA824791.1|CA824791 R48E05 two-month-old roots from clon... 44 0.012
gb|CA825402.1|CA825402 R58C10 two-month-old roots from clon... 44 0.012
gb|CA826101.1|CA826101 R72E10 two-month-old roots from clon... 44 0.012
gb|CB239711.1|CB239711 RSH15F08 two-month-old roots from cl... 44 0.012
gb|CF233163.1|CF233163 PtaJXO0020A8A0802 Poplar cDNA librar... 44 0.012
gb|CN517425.1|CN517425 GQ0092.B3_D13 GQ009 Populus trichoca... 44 0.012
gb|CV233832.1|CV233832 WS01212.B21_J02 PT-GT-FL-A-3 Populus... 44 0.012
gb|CV245661.1|CV245661 WS0259.B21_A17 PT-MB-N-A-15 Populus ... 44 0.012
gb|CV248404.1|CV248404 WS01120.B21_J21 PT-P-FL-A-2 Populus ... 44 0.012
gb|CV254677.1|CV254677 WS0241.B21_O01 PTxD-ICC-N-A-14 Popul... 44 0.012
gb|CV271002.1|CV271002 WS0153.B21_I10 PTxN-IB-A-6 Populus t... 44 0.012
gb|CV274834.1|CV274834 WS0174.B21.1_I15 PTxD-NR-A-8 Populus... 44 0.012
gb|CV276203.1|CV276203 WS0178.B21.1_P17 PTxD-NR-A-8 Populus... 44 0.012
gb|DT470611.1|DT470611 WS0121.BR_N05 PT-GT-FL-A-3 Populus t... 44 0.012
gb|DT475614.1|DT475614 WS0127.BR_K17 PT-GT-FL-A-3 Populus t... 44 0.012
gb|DT505305.1|DT505305 WS01810.C21_J03 PTxD-IL-N-A-9 Populu... 44 0.012
gb|DT520728.1|DT520728 WS02448.B21_G02 PTxD-ICC-N-A-14 Popu... 44 0.012
gb|DV463380.1|DV463380 MTUNUL1.P15.B11 NUL Populus fremonti... 44 0.012
gb|DV465698.1|DV465698 MTUNUL1.P42.A05 NUL Populus fremonti... 44 0.012
emb|AJ224895.1|PBTAJ4895 Populus balsamifera subsp. trichoc... 44 0.012
emb|AJ224896.1|PBTAJ4896 Populus balsamifera subsp. trichoc... 44 0.012
emb|AJ223621.1|PTR223621 Populus trichocarpa CCoAOMT1 gene,... 44 0.012
emb|A98904.1| Sequence 1 from Patent WO9909188 44 0.012
gb|BI128797.1|BI128797 G081P58Y Populus cambium cDNA librar... 42 0.048
gb|BI130257.1|BI130257 G102P94Y Populus cambium cDNA librar... 42 0.048
gb|BI132220.1|BI132220 G133P42Y Populus cambium cDNA librar... 42 0.048
gb|BU896110.1|BU896110 X035F09 Populus wood cDNA library Po... 42 0.048
gb|CA927274.1|CA927274 MTU6CR.P7.A08 Aspen root cDNA Librar... 42 0.048
gb|CF227600.1|CF227600 PtaXM0002B3B0303 Poplar cDNA library... 42 0.048
gb|CF229551.1|CF229551 PtaXM0026G9G0913 Poplar cDNA library... 42 0.048
gb|CK116555.1|CK116555 B013P74 Hybrid aspen plasmid library... 42 0.048
gb|DN487239.1|DN487239 Q021B04.3pR Populus dormant bud cDNA... 42 0.048
gb|DN496854.1|DN496854 Q021B04.5pR Populus dormant bud cDNA... 42 0.048
>gb|AF240466.1|AF240466 Populus tomentosa caffeoyl-CoA O-methyltransferase (CCoAOMT) mRNA,
partial cds
Length = 726
Score = 75.8 bits (38), Expect = 3e-012
Identities = 86/102 (84%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | |||||||| ||
Sbjct: 214 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccaccgccctg 273
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 274 gctatccctgaggatggcaagatcttggctatggacatcaac 315
>gb|CF233831.1|CF233831 PtaJXO0028B1B0103 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 584
Score = 73.8 bits (37), Expect = 1e-011
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 321 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 380
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaaccgcgagaacta 496
|| |||| ||||| |||| ||||||||| |||||||||||| | ||||||||
Sbjct: 381 gctatccctgaggatggcaagatcttggctatggacatcaacagagagaacta 433
>gb|BU867666.1|BU867666 M102H06 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 451
Score = 71.9 bits (36), Expect = 5e-011
Identities = 96/116 (82%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 288 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 347
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaaccgcgagaactacga 499
|| |||| ||||| |||| ||||||||| |||||||||||| | || ||||||||
Sbjct: 348 gctatccctgaggatggcaagatcttggctatggacatcaacagagaaaactacga 403
>gb|CV243032.1|CV243032 WS02516.B21.1_L10 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02516_L10 3', mRNA sequence
Length = 851
Score = 71.9 bits (36), Expect = 5e-011
Identities = 96/116 (82%)
Strand = Plus / Minus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 731 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 672
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaaccgcgagaactacga 499
|| |||| ||||| |||| ||||||||| |||||||||||| | || ||||||||
Sbjct: 671 gctatccctgaggatggcaagatcttggctatggacatcaacagagaaaactacga 616
>gb|DT495487.1|DT495487 WS01120.BR_J21 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01120_J21 5', mRNA sequence
Length = 663
Score = 71.9 bits (36), Expect = 5e-011
Identities = 96/116 (82%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 334 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 393
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaaccgcgagaactacga 499
|| |||| ||||| |||| ||||||||| |||||||||||| | || ||||||||
Sbjct: 394 gctatccctgaggatggcaagatcttggctatggacatcaacagagaaaactacga 449
>gb|DT497978.1|DT497978 WS0114.BR_A10 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0114_A10
5', mRNA sequence
Length = 605
Score = 71.9 bits (36), Expect = 5e-011
Identities = 96/116 (82%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 330 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 389
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaaccgcgagaactacga 499
|| |||| ||||| |||| ||||||||| |||||||||||| | || ||||||||
Sbjct: 390 gctatccctgaggatggcaagatcttggctatggacatcaacagagaaaactacga 445
>gb|BU826927.1|BU826927 UK126TD12 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 540
Score = 67.9 bits (34), Expect = 8e-010
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 288 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 347
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 348 gctatccctgaggatggcaagatcttggctatggacatcaac 389
>gb|BU888753.1|BU888753 P012B02 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 635
Score = 67.9 bits (34), Expect = 8e-010
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 288 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 347
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 348 gctatccctgaggatggcaagatcttggctatggacatcaac 389
>gb|BU892643.1|BU892643 P066E08 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 538
Score = 67.9 bits (34), Expect = 8e-010
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 288 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 347
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 348 gctatccctgaggatggcaagatcttggctatggacatcaac 389
>gb|BU897199.1|BU897199 X053A04 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 253
Score = 67.9 bits (34), Expect = 8e-010
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 49 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 108
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 109 gctatccctgaggatggcaagatcttggctatggacatcaac 150
>gb|CA821361.1|CA821361 RSH01H05 two-month-old roots from clone 'Beaupre' grown for 19 days
under restricted irrigation Populus trichocarpa x
Populus deltoides cDNA 5', mRNA sequence
Length = 623
Score = 67.9 bits (34), Expect = 8e-010
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 220 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 279
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 280 gctatccctgaggatggcaagatcttggctatggacatcaac 321
>gb|CF227474.1|CF227474 PtaD6D5D0507 Poplar cDNA library from wood tissues Populus alba x
Populus tremula cDNA 5', mRNA sequence
Length = 649
Score = 67.9 bits (34), Expect = 8e-010
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 201 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 260
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 261 gctatccctgaggatggcaagatcttggctatggacatcaac 302
>gb|CF229708.1|CF229708 PtaXM0028F3F0311 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 586
Score = 67.9 bits (34), Expect = 8e-010
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 328 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 387
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 388 gctatccctgaggatggcaagatcttggctatggacatcaac 429
>gb|CF233240.1|CF233240 PtaJXO0020H6H0616 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 588
Score = 67.9 bits (34), Expect = 8e-010
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 320 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 379
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 380 gctatccctgaggatggcaagatcttggctatggacatcaac 421
>gb|CF233668.1|CF233668 PtaJXO0026C3C0305 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 689
Score = 67.9 bits (34), Expect = 8e-010
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 39 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 98
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 99 gctatccctgaggatggcaagatcttggctatggacatcaac 140
>gb|CF236789.1|CF236789 PtaJXT7B9B0903 Poplar cDNA library from young tension xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 588
Score = 67.9 bits (34), Expect = 8e-010
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 321 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 380
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 381 gctatccctgaggatggcaagatcttggctatggacatcaac 422
>gb|CF236848.1|CF236848 PtaJXT7H9H0915 Poplar cDNA library from young tension xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 581
Score = 67.9 bits (34), Expect = 8e-010
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 320 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 379
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 380 gctatccctgaggatggcaagatcttggctatggacatcaac 421
>gb|CN549757.1|CN549757 GQ0244.B3_K15 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0244_K15 5', mRNA sequence
Length = 704
Score = 67.9 bits (34), Expect = 8e-010
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 139 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 198
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 199 gctatccctgaggatggcaagatcttggctatggacatcaac 240
>gb|CK319292.1|CK319292 X9P09b04 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 594
Score = 67.9 bits (34), Expect = 8e-010
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 17 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 76
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 77 gctatccctgaggatggcaagatcttggctatggacatcaac 118
>gb|CX169215.1|CX169215 F10_69-113_12.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 633
Score = 67.9 bits (34), Expect = 8e-010
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 308 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 367
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 368 gctatccctgaggatggcaagatcttggctatggacatcaac 409
>gb|CX660434.1|CX660434 PO01019C11 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01019C11 5', mRNA sequence
Length = 628
Score = 67.9 bits (34), Expect = 8e-010
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 310 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 369
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 370 gctatccctgaggatggcaagatcttggctatggacatcaac 411
>gb|DV466046.1|DV466046 MTUNUL1.P46.F06 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 811
Score = 67.9 bits (34), Expect = 8e-010
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 361 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 420
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 421 gctatccctgaggatggcaagatcttggctatggacatcaac 462
>gb|U27116.1|PTU27116 Populus tremuloides caffeoyl-CoA 3-O-methyltransferase mRNA,
complete cds
Length = 1046
Score = 67.9 bits (34), Expect = 8e-010
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 312 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 371
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 372 gctatccctgaggatggcaagatcttggctatggacatcaac 413
>emb|AJ130841.1|PBA130841 Populus balsamifera subsp. trichocarpa mRNA for caffeoyl-CoA
3-O-methyltransferase, clone PtCCoAOMT1a, partial
Length = 706
Score = 67.9 bits (34), Expect = 8e-010
Identities = 85/102 (83%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 46 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 105
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 106 gctatccctgaggatggcaagatcttggctatggacatcaac 147
>gb|CF236064.1|CF236064 PtaJXT0030C12C1206 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 654
Score = 61.9 bits (31), Expect = 5e-008
Identities = 84/102 (82%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||| ||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 43 gccaagaacaccanggagatcggtgtttacactggctattctctcttggccactgccctg 102
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 103 gctatccctgaggatggcaagatcttggctatggacatcaac 144
>gb|AI163274.1|AI163274 A039P05U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 410
Score = 60.0 bits (30), Expect = 2e-007
Identities = 85/102 (83%), Gaps = 1/102 (0%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 160 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgc-ctg 218
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 219 gctatccctgaggatggcaagatcttggctatggacatcaac 260
>gb|AI166541.1|AI166541 xylem.est.363 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 585
Score = 60.0 bits (30), Expect = 2e-007
Identities = 84/102 (82%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
||||| || |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 95 gccaaaaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 154
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 155 gctatccctgaggatggcaagatcttggctatggacatcaac 196
>gb|AI166820.1|AI166820 xylem.est.614 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 361
Score = 60.0 bits (30), Expect = 2e-007
Identities = 84/102 (82%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
||||| || |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 98 gccaaaaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 157
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 158 gctatccctgaggatggcaagatcttggctatggacatcaac 199
>gb|CF232683.1|CF232683 PtaJXO0014E2E0210 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 658
Score = 60.0 bits (30), Expect = 2e-007
Identities = 84/102 (82%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 330 gccaagaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 389
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| | ||| |||| ||||||||| ||||||||||||
Sbjct: 390 gctatccctggggatggcaagatcttggctatggacatcaac 431
>gb|AJ769470.1|AJ769470 AJ769470 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0001000001G09F1, mRNA sequence
Length = 358
Score = 60.0 bits (30), Expect = 2e-007
Identities = 162/206 (78%)
Strand = Plus / Plus
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||||| | ||| | || |||||||| || |||||| | |||||||| || |
Sbjct: 29 gcatgaaggagcttagggagttgactgccaagcatccctggaacatcatgaccacatctg 88
Query: 340 ccgacgagggccagttcctcaacatgctcatcaagctcatcggcgccaagaagaccatgg 399
| || || || || ||| | |||||||| | ||||| ||| |||||||| |||||||
Sbjct: 89 ctgatgaagggcaattcttgaacatgcttttaaagcttatcaatgccaagaacaccatgg 148
Query: 400 agatcggcgtctacaccggctactcgctcctcgccaccgcgctcgcactcccggaggacg 459
||||||| || ||||| ||||| || ||| | ||||| || || || |||| ||||| |
Sbjct: 149 agatcggtgtttacactggctattctctcttggccactgctcttgctatccctgaggatg 208
Query: 460 gcacgatcttggccatggacatcaac 485
| | ||||||||| ||||||||||||
Sbjct: 209 gaaagatcttggctatggacatcaac 234
>gb|AJ769529.1|AJ769529 AJ769529 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0001000008H09F1, mRNA sequence
Length = 342
Score = 60.0 bits (30), Expect = 2e-007
Identities = 162/206 (78%)
Strand = Plus / Minus
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||||| | ||| | || |||||||| || |||||| | |||||||| || |
Sbjct: 324 gcatgaaggagcttagggagttgactgccaagcatccttggaacatcatgaccacatctg 265
Query: 340 ccgacgagggccagttcctcaacatgctcatcaagctcatcggcgccaagaagaccatgg 399
| || || || || ||| | |||||||| | ||||| ||| |||||||| |||||||
Sbjct: 264 ctgatgaagggcaattcttgaacatgcttttaaagcttatcaatgccaagaacaccatgg 205
Query: 400 agatcggcgtctacaccggctactcgctcctcgccaccgcgctcgcactcccggaggacg 459
||||||| || ||||| ||||| || ||| | ||||| || || || |||| ||||| |
Sbjct: 204 agatcggtgtttacactggctattctctcttggccactgctcttgctatccctgaggatg 145
Query: 460 gcacgatcttggccatggacatcaac 485
| | ||||||||| ||||||||||||
Sbjct: 144 gaaagatcttggctatggacatcaac 119
>gb|DN494040.1|DN494040 I063P16.5pR Populus senescing leaves cDNA library Populus tremula
cDNA clone I063P16 5', mRNA sequence
Length = 544
Score = 60.0 bits (30), Expect = 2e-007
Identities = 84/102 (82%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
||||| || |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 328 gccaaaaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 387
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 388 gctatccctgaggatggcaagatcttggctatggacatcaac 429
>emb|AJ224894.1|PBTAJ4894 Populus balsamifera subsp. trichocarpa mRNA for caffeoyl-CoA
3-O-methyltransferase, clone PtCCoAOMT1b
Length = 1025
Score = 60.0 bits (30), Expect = 2e-007
Identities = 84/102 (82%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
||||| || |||||||||||||| || ||||| ||||| || ||| | ||||| || ||
Sbjct: 300 gccaaaaacaccatggagatcggtgtttacactggctattctctcttggccactgccctg 359
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaac 485
|| |||| ||||| |||| ||||||||| ||||||||||||
Sbjct: 360 gctatccctgaggatggcaagatcttggctatggacatcaac 401
>gb|AI162427.1|AI162427 A017P38U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 563
Score = 58.0 bits (29), Expect = 8e-007
Identities = 170/217 (78%)
Strand = Plus / Plus
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||||| | ||| | || |||||||| || |||||| | |||||||| || |
Sbjct: 213 gcatgaaggagcttagggagttgactgccaagcatccttggaacatcatgaccacatctg 272
Query: 340 ccgacgagggccagttcctcaacatgctcatcaagctcatcggcgccaagaagaccatgg 399
| || || || || ||| | |||||||| | ||||| ||| |||||||| |||||||
Sbjct: 273 ctgatgaagggcaattcttgaacatgcttttaaagcttatcaatgccaagaacaccatgg 332
Query: 400 agatcggcgtctacaccggctactcgctcctcgccaccgcgctcgcactcccggaggacg 459
|||| || || ||||| ||||| || ||| | ||||| || || || |||| ||||| |
Sbjct: 333 agattggtgtttacactggctattctctcttggccactgctcttgctatccctgaggatg 392
Query: 460 gcacgatcttggccatggacatcaaccgcgagaacta 496
| | ||||||||| |||||||||||| | ||||||||
Sbjct: 393 gaaagatcttggctatggacatcaacagagagaacta 429
>gb|BI127619.1|BI127619 G063P35Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 474
Score = 58.0 bits (29), Expect = 8e-007
Identities = 170/217 (78%)
Strand = Plus / Plus
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||||| | ||| | || |||||||| || |||||| | |||||||| || |
Sbjct: 100 gcatgaaggagcttagggagttgactgccaagcatccttggaacatcatgaccacatctg 159
Query: 340 ccgacgagggccagttcctcaacatgctcatcaagctcatcggcgccaagaagaccatgg 399
| || || || || ||| | |||||||| | ||||| ||| |||||||| |||||||
Sbjct: 160 ctgatgaagggcaattcttgaacatgcttttaaagcttatcaatgccaagaacaccatgg 219
Query: 400 agatcggcgtctacaccggctactcgctcctcgccaccgcgctcgcactcccggaggacg 459
|||| || || ||||| ||||| || ||| | ||||| || || || |||| ||||| |
Sbjct: 220 agattggtgtttacactggctattctctcttggccactgctcttgctatccctgaggatg 279
Query: 460 gcacgatcttggccatggacatcaaccgcgagaacta 496
| | ||||||||| |||||||||||| | ||||||||
Sbjct: 280 gaaagatcttggctatggacatcaacagagagaacta 316
>gb|BI128039.1|BI128039 G070P07Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 482
Score = 58.0 bits (29), Expect = 8e-007
Identities = 170/217 (78%)
Strand = Plus / Plus
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||||| | ||| | || |||||||| || |||||| | |||||||| || |
Sbjct: 86 gcatgaaggagcttagggagttgactgccaagcatccttggaacatcatgaccacatctg 145
Query: 340 ccgacgagggccagttcctcaacatgctcatcaagctcatcggcgccaagaagaccatgg 399
| || || || || ||| | |||||||| | ||||| ||| |||||||| |||||||
Sbjct: 146 ctgatgaagggcaattcttgaacatgcttttaaagcttatcaatgccaagaacaccatgg 205
Query: 400 agatcggcgtctacaccggctactcgctcctcgccaccgcgctcgcactcccggaggacg 459
|||| || || ||||| ||||| || ||| | ||||| || || || |||| ||||| |
Sbjct: 206 agattggtgtttacactggctattctctcttggccactgctcttgctatccctgaggatg 265
Query: 460 gcacgatcttggccatggacatcaaccgcgagaacta 496
| | ||||||||| |||||||||||| | ||||||||
Sbjct: 266 gaaagatcttggctatggacatcaacagagagaacta 302
>gb|BI128371.1|BI128371 G074P87Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 425
Score = 58.0 bits (29), Expect = 8e-007
Identities = 170/217 (78%)
Strand = Plus / Plus
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||||| | ||| | || |||||||| || |||||| | |||||||| || |
Sbjct: 68 gcatgaaggagcttagggagttgactgccaagcatccttggaacatcatgaccacatctg 127
Query: 340 ccgacgagggccagttcctcaacatgctcatcaagctcatcggcgccaagaagaccatgg 399
| || || || || ||| | |||||||| | ||||| ||| |||||||| |||||||
Sbjct: 128 ctgatgaagggcaattcttgaacatgcttttaaagcttatcaatgccaagaacaccatgg 187
Query: 400 agatcggcgtctacaccggctactcgctcctcgccaccgcgctcgcactcccggaggacg 459
|||| || || ||||| ||||| || ||| | ||||| || || || |||| ||||| |
Sbjct: 188 agattggtgtttacactggctattctctcttggccactgctcttgctatccctgaggatg 247
Query: 460 gcacgatcttggccatggacatcaaccgcgagaacta 496
| | ||||||||| |||||||||||| | ||||||||
Sbjct: 248 gaaagatcttggctatggacatcaacagagagaacta 284
>gb|BI132057.1|BI132057 G130P33Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 479
Score = 58.0 bits (29), Expect = 8e-007
Identities = 170/217 (78%)
Strand = Plus / Plus
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||||| | ||| | || |||||||| || |||||| | |||||||| || |
Sbjct: 199 gcatgaaggagcttagggagttgactgccaagcatccttggaacatcatgaccacatctg 258
Query: 340 ccgacgagggccagttcctcaacatgctcatcaagctcatcggcgccaagaagaccatgg 399
| || || || || ||| | |||||||| | ||||| ||| |||||||| |||||||
Sbjct: 259 ctgatgaagggcaattcttgaacatgcttttaaagcttatcaatgccaagaacaccatgg 318
Query: 400 agatcggcgtctacaccggctactcgctcctcgccaccgcgctcgcactcccggaggacg 459
|||| || || ||||| ||||| || ||| | ||||| || || || |||| ||||| |
Sbjct: 319 agattggtgtttacactggctattctctcttggccactgctcttgctatccctgaggatg 378
Query: 460 gcacgatcttggccatggacatcaaccgcgagaacta 496
| | ||||||||| |||||||||||| | ||||||||
Sbjct: 379 gaaagatcttggctatggacatcaacagagagaacta 415
>gb|BU835879.1|BU835879 T079G08 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 735
Score = 58.0 bits (29), Expect = 8e-007
Identities = 170/217 (78%)
Strand = Plus / Plus
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||||| | ||| | || |||||||| || |||||| | |||||||| || |
Sbjct: 228 gcatgaaggagcttagggagttgactgccaagcatccttggaacatcatgaccacatctg 287
Query: 340 ccgacgagggccagttcctcaacatgctcatcaagctcatcggcgccaagaagaccatgg 399
| || || || || ||| | |||||||| | ||||| ||| |||||||| |||||||
Sbjct: 288 ctgatgaagggcaattcttgaacatgcttttaaagcttatcaatgccaagaacaccatgg 347
Query: 400 agatcggcgtctacaccggctactcgctcctcgccaccgcgctcgcactcccggaggacg 459
|||| || || ||||| ||||| || ||| | ||||| || || || |||| ||||| |
Sbjct: 348 agattggtgtttacactggctattctctcttggccactgctcttgctatccctgaggatg 407
Query: 460 gcacgatcttggccatggacatcaaccgcgagaacta 496
| | ||||||||| |||||||||||| | ||||||||
Sbjct: 408 gaaagatcttggctatggacatcaacagagagaacta 444
>gb|BU886756.1|BU886756 R050B04 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 450
Score = 58.0 bits (29), Expect = 8e-007
Identities = 170/217 (78%)
Strand = Plus / Plus
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||||| | ||| | || |||||||| || |||||| | |||||||| || |
Sbjct: 206 gcatgaaggagcttagggagttgactgccaagcatccttggaacatcatgaccacatctg 265
Query: 340 ccgacgagggccagttcctcaacatgctcatcaagctcatcggcgccaagaagaccatgg 399
| || || || || ||| | |||||||| | ||||| ||| |||||||| |||||||
Sbjct: 266 ctgatgaagggcaattcttgaacatgcttttaaagcttatcaatgccaagaacaccatgg 325
Query: 400 agatcggcgtctacaccggctactcgctcctcgccaccgcgctcgcactcccggaggacg 459
|||| || || ||||| ||||| || ||| | ||||| || || || |||| ||||| |
Sbjct: 326 agattggtgtttacactggctattctctcttggccactgctcttgctatccctgaggatg 385
Query: 460 gcacgatcttggccatggacatcaaccgcgagaacta 496
| | ||||||||| |||||||||||| | ||||||||
Sbjct: 386 gaaagatcttggctatggacatcaacagagagaacta 422
>gb|BU889313.1|BU889313 P019C08 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 570
Score = 58.0 bits (29), Expect = 8e-007
Identities = 92/113 (81%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| ||||||||||| || || ||||| ||||| || ||| | ||||| || ||
Sbjct: 330 gccaagaacaccatggagattggtgtttacactggctattctctcttggccactgctctt 389
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaaccgcgagaacta 496
|| |||| ||||| || | ||||||||| |||||||||||| | ||||||||
Sbjct: 390 gctatccctgaggatggaaagatcttggctatggacatcaacagagagaacta 442
>gb|BU893993.1|BU893993 P085F05 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 594
Score = 58.0 bits (29), Expect = 8e-007
Identities = 170/217 (78%)
Strand = Plus / Plus
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||||| | ||| | || |||||||| || |||||| | |||||||| || |
Sbjct: 226 gcatgaaggagcttagggagttgactgccaagcatccttggaacatcatgaccacatctg 285
Query: 340 ccgacgagggccagttcctcaacatgctcatcaagctcatcggcgccaagaagaccatgg 399
| || || || || ||| | |||||||| | ||||| ||| |||||||| |||||||
Sbjct: 286 ctgatgaagggcaattcttgaacatgcttttaaagcttatcaatgccaagaacaccatgg 345
Query: 400 agatcggcgtctacaccggctactcgctcctcgccaccgcgctcgcactcccggaggacg 459
|||| || || ||||| ||||| || ||| | ||||| || || || |||| ||||| |
Sbjct: 346 agattggtgtttacactggctattctctcttggccactgctcttgctatccctgaggatg 405
Query: 460 gcacgatcttggccatggacatcaaccgcgagaacta 496
| | ||||||||| |||||||||||| | ||||||||
Sbjct: 406 gaaagatcttggctatggacatcaacagagagaacta 442
>gb|BU894619.1|BU894619 X012C02 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 641
Score = 58.0 bits (29), Expect = 8e-007
Identities = 92/113 (81%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| ||||||||||| || || ||||| ||||| || ||| | ||||| || ||
Sbjct: 336 gccaagaacaccatggagattggtgtttacactggctattctctcttggccactgctctt 395
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaaccgcgagaacta 496
|| |||| ||||| || | ||||||||| |||||||||||| | ||||||||
Sbjct: 396 gctatccctgaggatggaaagatcttggctatggacatcaacagagagaacta 448
>gb|BU895719.1|BU895719 X030A08 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 594
Score = 58.0 bits (29), Expect = 8e-007
Identities = 170/217 (78%)
Strand = Plus / Plus
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||||| | ||| | || |||||||| || |||||| | |||||||| || |
Sbjct: 226 gcatgaaggagcttagggagttgactgccaagcatccttggaacatcatgaccacatctg 285
Query: 340 ccgacgagggccagttcctcaacatgctcatcaagctcatcggcgccaagaagaccatgg 399
| || || || || ||| | |||||||| | ||||| ||| |||||||| |||||||
Sbjct: 286 ctgatgaagggcaattcttgaacatgcttttaaagcttatcaatgccaagaacaccatgg 345
Query: 400 agatcggcgtctacaccggctactcgctcctcgccaccgcgctcgcactcccggaggacg 459
||||||| || ||||| ||||| || || | ||||| || || || |||| ||||| |
Sbjct: 346 agatcggtgtttacactggctattctcttttggccactgctcttgctatccctgaggatg 405
Query: 460 gcacgatcttggccatggacatcaaccgcgagaacta 496
| | ||||||||| |||||||||||| | ||||||||
Sbjct: 406 gaaagatcttggctatggacatcaacagagagaacta 442
>gb|BU896335.1|BU896335 X039C02 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 626
Score = 58.0 bits (29), Expect = 8e-007
Identities = 170/217 (78%)
Strand = Plus / Plus
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||||| | ||| | || |||||||| || |||||| | |||||||| || |
Sbjct: 227 gcatgaaggagcttagggagttgactgccaagcatccttggaacatcatgaccacatctg 286
Query: 340 ccgacgagggccagttcctcaacatgctcatcaagctcatcggcgccaagaagaccatgg 399
| || || || || ||| | |||||||| | ||||| ||| |||||||| |||||||
Sbjct: 287 ctgatgaagggcaattcttgaacatgcttttaaagcttatcaatgccaagaacaccatgg 346
Query: 400 agatcggcgtctacaccggctactcgctcctcgccaccgcgctcgcactcccggaggacg 459
|||| || || ||||| ||||| || ||| | ||||| || || || |||| ||||| |
Sbjct: 347 agattggtgtttacactggctattctctcttggccactgctcttgctatccctgaggatg 406
Query: 460 gcacgatcttggccatggacatcaaccgcgagaacta 496
| | ||||||||| |||||||||||| | ||||||||
Sbjct: 407 gaaagatcttggctatggacatcaacagagagaacta 443
>gb|BU897453.1|BU897453 X058B03 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 627
Score = 58.0 bits (29), Expect = 8e-007
Identities = 170/217 (78%)
Strand = Plus / Plus
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||||| | ||| | || |||||||| || |||||| | |||||||| || |
Sbjct: 227 gcatgaaggagcttagggagttgactgccaagcatccttggaacatcatgaccacatctg 286
Query: 340 ccgacgagggccagttcctcaacatgctcatcaagctcatcggcgccaagaagaccatgg 399
| || || || || ||| | |||||||| | ||||| ||| |||||||| |||||||
Sbjct: 287 ctgatgaagggcaattcttgaacatgcttttaaagcttatcaatgccaagaacaccatgg 346
Query: 400 agatcggcgtctacaccggctactcgctcctcgccaccgcgctcgcactcccggaggacg 459
|||| || || ||||| ||||| || ||| | ||||| || || || |||| ||||| |
Sbjct: 347 agattggtgtttacactggctattctctcttggccactgctcttgctatccctgaggatg 406
Query: 460 gcacgatcttggccatggacatcaaccgcgagaacta 496
| | ||||||||| |||||||||||| | ||||||||
Sbjct: 407 gaaagatcttggctatggacatcaacagagagaacta 443
>gb|CF227858.1|CF227858 PtaXM0005E9E0909 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 687
Score = 58.0 bits (29), Expect = 8e-007
Identities = 92/113 (81%)
Strand = Plus / Plus
Query: 384 gccaagaagaccatggagatcggcgtctacaccggctactcgctcctcgccaccgcgctc 443
|||||||| ||||||||||| || || ||||| ||||| || ||| | ||||| || ||
Sbjct: 331 gccaagaacaccatggagattggtgtttacactggctattctctcttggccactgctctt 390
Query: 444 gcactcccggaggacggcacgatcttggccatggacatcaaccgcgagaacta 496
|| |||| ||||| || | ||||||||| |||||||||||| | ||||||||
Sbjct: 391 gctatccctgaggatggaaagatcttggctatggacatcaacagagagaacta 443
>gb|CF229531.1|CF229531 PtaXM0026F11F1111 Poplar cDNA library from mature xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 58.0 bits (29), Expect = 8e-007
Identities = 170/217 (78%)
Strand = Plus / Plus
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||||| | ||| | || |||||||| || |||||| | |||||||| || |
Sbjct: 227 gcatgaaggagcttagggagttgactgccaagcatccttggaacatcatgaccacatctg 286
Query: 340 ccgacgagggccagttcctcaacatgctcatcaagctcatcggcgccaagaagaccatgg 399
| || || || || ||| | |||||||| | ||||| ||| |||||||| |||||||
Sbjct: 287 ctgatgaagggcaattcttgaacatgcttttaaagcttatcaatgccaagaacaccatgg 346
Query: 400 agatcggcgtctacaccggctactcgctcctcgccaccgcgctcgcactcccggaggacg 459
|||| || || ||||| ||||| || ||| | ||||| || || || |||| ||||| |
Sbjct: 347 agattggtgtttacactggctattctctcttggccactgctcttgctatccctgaggatg 406
Query: 460 gcacgatcttggccatggacatcaaccgcgagaacta 496
| | ||||||||| |||||||||||| | ||||||||
Sbjct: 407 gaaagatcttggctatggacatcaacagagagaacta 443
>gb|CF232267.1|CF232267 PtaJXO0008D10D1008 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 670
Score = 58.0 bits (29), Expect = 8e-007
Identities = 170/217 (78%)
Strand = Plus / Plus
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||||| | ||| | || |||||||| || |||||| | |||||||| || |
Sbjct: 224 gcatgaaggagcttagggagttgactgccaagcatccttggaacatcatgaccacatctg 283
Query: 340 ccgacgagggccagttcctcaacatgctcatcaagctcatcggcgccaagaagaccatgg 399
| || || || || ||| | |||||||| | ||||| ||| |||||||| |||||||
Sbjct: 284 ctgatgaagggcaattcttgaacatgcttttaaagcttatcaatgccaagaacaccatgg 343
Query: 400 agatcggcgtctacaccggctactcgctcctcgccaccgcgctcgcactcccggaggacg 459
|||| || || ||||| ||||| || ||| | ||||| || || || |||| ||||| |
Sbjct: 344 agattggtgtttacactggctattctctcttggccactgctcttgctatccctgaggatg 403
Query: 460 gcacgatcttggccatggacatcaaccgcgagaacta 496
| | ||||||||| |||||||||||| | ||||||||
Sbjct: 404 gaaagatcttggctatggacatcaacagagagaacta 440
>gb|CF232502.1|CF232502 PtaJXO0011C4C0406 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 705
Score = 58.0 bits (29), Expect = 8e-007
Identities = 170/217 (78%)
Strand = Plus / Plus
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||||| | ||| | || |||||||| || |||||| | |||||||| || |
Sbjct: 226 gcatgaaggagcttagggagttgactgccaagcatccttggaacatcatgaccacatctg 285
Query: 340 ccgacgagggccagttcctcaacatgctcatcaagctcatcggcgccaagaagaccatgg 399
| || || || || ||| | |||||||| | ||||| ||| |||||||| |||||||
Sbjct: 286 ctgatgaagggcaattcttgaacatgcttttaaagcttatcaatgccaagaacaccatgg 345
Query: 400 agatcggcgtctacaccggctactcgctcctcgccaccgcgctcgcactcccggaggacg 459
|||| || || ||||| ||||| || ||| | ||||| || || || |||| ||||| |
Sbjct: 346 agattggtgtttacactggctattctctcttggccactgctcttgctatccctgaggatg 405
Query: 460 gcacgatcttggccatggacatcaaccgcgagaacta 496
| | ||||||||| |||||||||||| | ||||||||
Sbjct: 406 gaaagatcttggctatggacatcaacagagagaacta 442
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 75,551
Number of Sequences: 369679
Number of extensions: 75551
Number of successful extensions: 19961
Number of sequences better than 0.5: 140
Number of HSP's better than 0.5 without gapping: 102
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 19449
Number of HSP's gapped (non-prelim): 492
length of query: 1190
length of database: 203,408,664
effective HSP length: 19
effective length of query: 1171
effective length of database: 196,384,763
effective search space: 229966557473
effective search space used: 229966557473
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)