BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2441542.2.1
(3782 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY055724.2| Populus tremuloides cellulose synthase (CesA... 478 e-133
gb|CN549808.1|CN549808 GQ0241.B3_H11 GQ024 Populus trichoca... 305 7e-081
gb|BP924070.1|BP924070 BP924070 full-length enriched poplar... 303 3e-080
gb|CA931952.1|CA931952 MTU4TA.P25.A10 Aspen apex cDNA Libra... 299 4e-079
gb|CA932078.1|CA932078 MTU4TA.P26.F03 Aspen apex cDNA Libra... 266 6e-069
gb|CX169886.1|CX169886 G10_69-94_14.ab1 leaf inoculated wit... 262 9e-068
gb|CA930801.1|CA930801 MTU2TA.P10.D08 Aspen apex cDNA Libra... 228 1e-057
gb|CN524693.1|CN524693 GQ015M08.T3_H02 GQ015 Populus tricho... 206 5e-051
gb|CA927446.1|CA927446 MTU6CR.P9.B04 Aspen root cDNA Librar... 186 4e-045
gb|CF234438.1|CF234438 Ptajxojxo2F10F1012 Poplar cDNA libra... 168 1e-039
gb|DT473511.1|DT473511 WS01229.BR_N17 PT-GT-FL-A-3 Populus ... 165 2e-038
gb|AY196961.1| Populus tremuloides cellulose synthase 6 (Ce... 165 2e-038
gb|AJ779945.1|AJ779945 AJ779945 Populus euphratica root 3-6... 163 6e-038
gb|AY162181.1| Populus tremuloides cellulose synthase (CesA... 163 6e-038
gb|AJ779545.1|AJ779545 AJ779545 Populus euphratica root 3-6... 155 1e-035
gb|AY330165.1| Populus tremuloides CesA5A-like mRNA, partia... 151 2e-034
gb|BU823358.1|BU823358 UB51DPD11 Populus tremula cambium cD... 147 4e-033
gb|CV244615.1|CV244615 WS0255.B21_C09 PT-MB-N-A-15 Populus ... 145 1e-032
gb|DT489371.1|DT489371 WS02542.B21_A18 PT-MB-N-A-15 Populus... 145 1e-032
gb|AJ778214.1|AJ778214 AJ778214 Populus euphratica root 3-6... 129 9e-028
gb|CA934196.1|CA934196 MTU3TS.P4.D08 Aspen stem cDNA Librar... 125 1e-026
gb|AJ778476.1|AJ778476 AJ778476 Populus euphratica cambium ... 121 2e-025
gb|AY573573.2| Populus tremula x Populus tremuloides cellul... 121 2e-025
gb|CN520281.1|CN520281 GQ0105.B3_A14 GQ010 Populus trichoca... 119 8e-025
gb|DT493580.1|DT493580 WS0111.BR_M17 PT-P-FL-A-2 Populus tr... 119 8e-025
gb|AF081534.1|AF081534 Populus x canescens cellulose syntha... 119 8e-025
gb|AF527387.1| Populus tremuloides xylem-specific cellulose... 119 8e-025
gb|AY573571.1| Populus tremula x Populus tremuloides cellul... 119 8e-025
gb|CF229283.1|CF229283 PtaXM0023E4E0410 Poplar cDNA library... 109 8e-022
gb|CN518195.1|CN518195 GQ0092.B3_P04 GQ009 Populus trichoca... 109 8e-022
gb|AY162180.1| Populus tremuloides cellulose synthase (CesA... 109 8e-022
gb|CN522480.1|CN522480 GQ0123.B3_H17 GQ012 Populus trichoca... 105 1e-020
gb|AY095297.1| Populus tremuloides cellulose synthase (CesA... 105 1e-020
gb|AY573572.1| Populus tremula x Populus tremuloides cellul... 105 1e-020
gb|CV130875.1|CV130875 X9SP07b02 Populus stem seasonal libr... 103 5e-020
gb|DT509821.1|DT509821 WS02424.BR_N10 PTxD-ICC-N-A-14 Popul... 103 5e-020
gb|CA926289.1|CA926289 MTU6CR.P13.C05 Aspen root cDNA Libra... 101 2e-019
gb|AJ777820.1|AJ777820 AJ777820 Populus euphratica root 3-6... 100 8e-019
gb|CF227502.1|CF227502 PtaD6G2G0214 Poplar cDNA library fro... 96 1e-017
gb|CF232388.1|CF232388 PtaJXO0009H2H0216 Poplar cDNA librar... 96 1e-017
gb|CN519879.1|CN519879 GQ0108.B3_I06 GQ010 Populus trichoca... 96 1e-017
gb|CV283069.1|CV283069 WS0186.B21_F15 PTxD-IL-N-A-9 Populus... 96 1e-017
gb|DT470299.1|DT470299 WS01920.C21_H07 PT-DX-N-A-10 Populus... 96 1e-017
gb|DT476519.1|DT476519 WS01229.B21_N17 PT-GT-FL-A-3 Populus... 96 1e-017
gb|CF235713.1|CF235713 PtaJXT0026B7B0703 Poplar cDNA librar... 88 3e-015
gb|AJ774508.1|AJ774508 AJ774508 Populus euphratica shoot 3-... 88 3e-015
gb|AJ775294.1|AJ775294 AJ775294 Populus euphratica shoot 3-... 88 3e-015
gb|AJ775532.1|AJ775532 AJ775532 Populus euphratica shoot 3-... 88 3e-015
gb|CF235321.1|CF235321 PtaJXT0021D9D0907 Poplar cDNA librar... 86 1e-014
gb|AJ771596.1|AJ771596 AJ771596 Populus euphratica root 3-6... 86 1e-014
gb|CV227790.1|CV227790 WS0168.B21_D13 PT-DX-A-7 Populus tri... 86 1e-014
gb|CV252351.1|CV252351 PX0011.B21_G15 PT-X-FL-A-1 Populus t... 86 1e-014
gb|AY573575.1| Populus tremula x Populus tremuloides cellul... 86 1e-014
gb|CK107258.1|CK107258 UB51DPD11.5pR Populus active cambium... 84 5e-014
gb|BI128217.1|BI128217 G072P74Y Populus cambium cDNA librar... 80 7e-013
gb|CK102305.1|CK102305 G072P74.5pR Populus tension wood cDN... 80 7e-013
gb|AJ778410.1|AJ778410 AJ778410 Populus euphratica cambium ... 80 7e-013
gb|DT487943.1|DT487943 WS02535.B21_B11 PT-MB-N-A-15 Populus... 80 7e-013
gb|AF072131.1|AF072131 Populus tremuloides secondary xylem ... 80 7e-013
gb|AF417485.1| Populus tremuloides cellulose synthase (CesA... 80 7e-013
gb|DQ004570.1| Populus tomentosa cellulose synthase (cesa1)... 80 7e-013
gb|CF237106.1|CF237106 Ptajxtjxt2B1B0103 Poplar cDNA librar... 78 3e-012
gb|CV242542.1|CV242542 WS02515.B21_F16 PT-MB-N-A-15 Populus... 78 3e-012
gb|CN550567.1|CN550567 GQ0241.B3_I15 GQ024 Populus trichoca... 76 1e-011
gb|CK318831.1|CK318831 X9P03h01 Populus stem seasonal libra... 76 1e-011
gb|CV268371.1|CV268371 WS0205.B21_E18 PTxN-IB-N-A-11 Populu... 76 1e-011
gb|CV229552.1|CV229552 WS01913.B21_K14 PT-DX-N-A-10 Populus... 74 4e-011
gb|CV275712.1|CV275712 WS0177.B21_F22 PTxD-NR-A-8 Populus t... 74 4e-011
gb|AY573574.1| Populus tremula x Populus tremuloides cellul... 74 4e-011
gb|BU815407.1|BU815407 N041C05 Populus bark cDNA library Po... 72 2e-010
gb|CF237222.1|CF237222 Ptajxtjxt3E10E1010 Poplar cDNA libra... 72 2e-010
gb|CN523759.1|CN523759 GQ015M04.T3_A09 GQ015 Populus tricho... 72 2e-010
gb|CK320732.1|CK320732 X9SP01b11 Populus stem seasonal libr... 72 2e-010
gb|DN495393.1|DN495393 N041C05.5pR Populus bark cDNA librar... 72 2e-010
gb|CK087778.1|CK087778 A020P56.3pR Hybrid aspen plasmid lib... 70 7e-010
gb|CK092703.1|CK092703 G092P25.3pR Populus tension wood cDN... 70 7e-010
gb|CK102806.1|CK102806 G092P25.5pR Populus tension wood cDN... 70 7e-010
gb|CA925680.1|CA925680 MTU7TL.P4.E11 Aspen leaf cDNA Librar... 68 3e-009
gb|CK100621.1|CK100621 C057P32.5pR Populus strain T89 leave... 68 3e-009
gb|CV273968.1|CV273968 WS01712.B21_M13 PTxD-NR-A-8 Populus ... 66 1e-008
gb|BU817734.1|BU817734 UA20CPD09 Populus tremula cambium cD... 64 4e-008
gb|BU897746.1|BU897746 X067G02 Populus wood cDNA library Po... 64 4e-008
gb|DV465848.1|DV465848 MTUNUL1.P43.H11 NUL Populus fremonti... 64 4e-008
gb|DV466748.1|DV466748 MTUNUL1.P9.G02 NUL Populus fremontii... 64 4e-008
gb|BU879588.1|BU879588 V062A11 Populus flower cDNA library ... 62 2e-007
gb|CK097446.1|CK097446 UB51DPD11.3pR Populus active cambium... 62 2e-007
gb|CV262834.1|CV262834 WS0202.B21_K05 PTxN-IB-N-A-11 Populu... 62 2e-007
gb|CV282433.1|CV282433 WS0184.B21_J19 PTxD-IL-N-A-9 Populus... 62 2e-007
gb|DN502245.1|DN502245 V062A11.5pR Populus male catkins cDN... 62 2e-007
gb|DT493063.1|DT493063 WS02553.C21_E11 PT-MB-N-A-15 Populus... 62 2e-007
gb|DT500162.1|DT500162 PX0011.BR_G15 PT-X-FL-A-1 Populus tr... 62 2e-007
gb|DT500468.1|DT500468 PX0015.BR_I21 PT-X-FL-A-1 Populus tr... 62 2e-007
gb|CB239511.1|CB239511 RSH12F10 two-month-old roots from cl... 60 7e-007
gb|CF232701.1|CF232701 PtaJXO0014G1G0113 Poplar cDNA librar... 60 7e-007
gb|BI131187.1|BI131187 G116P69Y Populus cambium cDNA librar... 56 1e-005
gb|CA926496.1|CA926496 MTU6CR.P15.F11 Aspen root cDNA Libra... 56 1e-005
gb|CA926817.1|CA926817 MTU6CR.P1.E04 Aspen root cDNA Librar... 56 1e-005
gb|CF229078.1|CF229078 PtaXM0021A1A0101 Poplar cDNA library... 56 1e-005
gb|CF233149.1|CF233149 PtaJXO0019H4H0416 Poplar cDNA librar... 56 1e-005
gb|CK088138.1|CK088138 A040P09.3pR Hybrid aspen plasmid lib... 56 1e-005
gb|DN485869.1|DN485869 N041C05.3pR Populus bark cDNA librar... 56 1e-005
gb|AY330166.1| Populus tremuloides CesA7A-like mRNA, partia... 56 1e-005
gb|BI130668.1|BI130668 G109P08Y Populus cambium cDNA librar... 54 4e-005
gb|CK091716.1|CK091716 F120P33.3pR Populus flower cDNA libr... 54 4e-005
gb|CK092951.1|CK092951 G101P46.3pR Populus tension wood cDN... 54 4e-005
gb|CK101805.1|CK101805 F120P33.5pR Populus flower cDNA libr... 54 4e-005
gb|CK317759.1|CK317759 B9P01d09 Populus stem seasonal libra... 54 4e-005
gb|BI127228.1|BI127228 G057P27Y Populus cambium cDNA librar... 52 2e-004
gb|BI129538.1|BI129538 G092P15Y Populus cambium cDNA librar... 52 2e-004
gb|BU895617.1|BU895617 X028D07 Populus wood cDNA library Po... 52 2e-004
gb|CF236447.1|CF236447 PtaJXT2H2H0216 Poplar cDNA library f... 52 2e-004
gb|CK102299.1|CK102299 G072P58.5pR Populus tension wood cDN... 52 2e-004
gb|CK107777.1|CK107777 G057P27 Populus tension wood cDNA li... 52 2e-004
gb|CK116718.1|CK116718 B016P26 Hybrid aspen plasmid library... 52 2e-004
gb|BP927588.1|BP927588 BP927588 full-length enriched poplar... 52 2e-004
gb|DN493622.1|DN493622 G071P10.5pR Populus tension wood cDN... 52 2e-004
gb|CF216196.1|CF216196 PT1004 Hybrid aspen xylem up-regulat... 50 6e-004
gb|CF228734.1|CF228734 PtaXM0016G4G0414 Poplar cDNA library... 50 6e-004
gb|CF232837.1|CF232837 PtaJXO0016D5D0507 Poplar cDNA librar... 50 6e-004
gb|CF234212.1|CF234212 PtaJXO3H12H1216 Poplar cDNA library ... 50 6e-004
gb|CN549469.1|CN549469 GQ0241.B3_B20 GQ024 Populus trichoca... 50 6e-004
gb|DV466097.1|DV466097 MTUNUL1.P47.C03 NUL Populus fremonti... 50 6e-004
gb|BI071413.1|BI071413 C057P32U Populus strain T89 leaves P... 48 0.002
gb|BU870116.1|BU870116 Q008I09 Populus flower cDNA library ... 48 0.002
gb|CF227669.1|CF227669 PtaXM0003A12A1202 Poplar cDNA librar... 48 0.002
gb|CF229941.1|CF229941 PtaC0001G4G0414 Poplar cDNA library ... 48 0.002
gb|CK111062.1|CK111062 Q008E05 Populus dormant bud cDNA lib... 48 0.002
gb|AY162183.1| Populus tremuloides cellulose synthase-like ... 48 0.002
gb|BI129778.1|BI129778 G095P49Y Populus cambium cDNA librar... 46 0.010
gb|BU897991.1|BU897991 X073A11 Populus wood cDNA library Po... 46 0.010
gb|CF235639.1|CF235639 PtaJXT0025C12C1206 Poplar cDNA libra... 46 0.010
gb|AJ778868.1|AJ778868 AJ778868 Populus euphratica cambium ... 46 0.010
gb|CV252662.1|CV252662 PX0015.B21_I21 PT-X-FL-A-1 Populus t... 46 0.010
gb|AI163338.1|AI163338 A040P09U Hybrid aspen plasmid librar... 44 0.039
gb|CV273266.1|CV273266 WS01710.B21_E12 PTxD-NR-A-8 Populus ... 44 0.039
gb|CV275252.1|CV275252 WS0175.B21_N18 PTxD-NR-A-8 Populus t... 44 0.039
gb|BI128439.1|BI128439 G076P02Y Populus cambium cDNA librar... 42 0.15
gb|BI138973.1|BI138973 F120P33Y Populus flower cDNA library... 42 0.15
gb|BU869681.1|BU869681 Q003B09 Populus flower cDNA library ... 42 0.15
gb|BU894292.1|BU894292 X005H01 Populus wood cDNA library Po... 42 0.15
gb|BU897587.1|BU897587 X060B01 Populus wood cDNA library Po... 42 0.15
gb|BU897715.1|BU897715 X067B10 Populus wood cDNA library Po... 42 0.15
gb|CF216282.1|CF216282 PT1104 Hybrid aspen xylem up-regulat... 42 0.15
gb|CF227527.1|CF227527 PtaXM0001A6A0602 Poplar cDNA library... 42 0.15
gb|CF228386.1|CF228386 PtaXM0012D12D1208 Poplar cDNA librar... 42 0.15
gb|CF228576.1|CF228576 PtaXM0014G2G0214 Poplar cDNA library... 42 0.15
gb|CF229187.1|CF229187 PtaXM0022D10D1008 Poplar cDNA librar... 42 0.15
gb|CF232848.1|CF232848 PtaJXO0016E6E0610 Poplar cDNA librar... 42 0.15
gb|CF235000.1|CF235000 PtaJXT0017F7F0711 Poplar cDNA librar... 42 0.15
gb|CF236510.1|CF236510 PtaJXT3F6F0612 Poplar cDNA library f... 42 0.15
gb|CF236645.1|CF236645 PtaJXT5D1D0107 Poplar cDNA library f... 42 0.15
gb|CF236856.1|CF236856 PtaJXT8A6A0602 Poplar cDNA library f... 42 0.15
gb|CK092841.1|CK092841 G097P01.3pR Populus tension wood cDN... 42 0.15
gb|CK318662.1|CK318662 X9P01h06 Populus stem seasonal libra... 42 0.15
gb|CK319325.1|CK319325 X9P09e02 Populus stem seasonal libra... 42 0.15
gb|CV228438.1|CV228438 WS01910.B21_B15 PT-DX-N-A-10 Populus... 42 0.15
gb|CF936037.1|CF936037 PO3001A10 Populus tomentiglandulosa ... 42 0.15
>gb|AY055724.2| Populus tremuloides cellulose synthase (CesA5) mRNA, complete cds
Length = 3532
Score = 478 bits (241), Expect = e-133
Identities = 640/773 (82%)
Strand = Plus / Minus
Query: 1609 tcataaccatatagagctgttctgttgaaaacacagccagtgcccacataaactggtcct 1668
||||||||||| | || || ||||| || ||||| ||||| |||||||| || ||||||
Sbjct: 2157 tcataaccatacaatgccgtcctgttaaagacacatccagtacccacatagacaggtcct 2098
Query: 1669 tggatgccatcaagacctctcaagttaatatcgaaaaacacggtgttcctgttggcatat 1728
|| || ||||| ||||| |||||||| ||||| || || || || || | |||||||||
Sbjct: 2097 tgaataccatccagacccctcaagtttatatcaaagaatacagtattgcgattggcatat 2038
Query: 1729 cgatcattcctatcaataccatcgaacctctggggaaactgaacatagcagacactcctt 1788
||||||||||| ||||| ||||| || || || ||||||||||||||||||||| |
Sbjct: 2037 cgatcattcctgtcaatgccatcaaatctttgtggaaactgaacatagcagacatgtttc 1978
Query: 1789 cctaggttaggatccataaggaagcacatagcttccctgagagccttactgttgttgatg 1848
|| |||||||||||| | | ||| ||||||||||| || | |||||| || |||| |||
Sbjct: 1977 ccaaggttaggatccttcatgaaacacatagcttctctcaaagccttgctaatgtttatg 1918
Query: 1849 tagtgatcacaatcaagattcaacatgtattgtccattggtaagcacagctgagacgcgg 1908
||||||||||||||||||||||||| | | | ||||| || ||||| ||||| || ||
Sbjct: 1917 tagtgatcacaatcaagattcaacaagaaaggcccattagttagcacggctgatacacga 1858
Query: 1909 acaagagcattcatggcaccagctttcttgtgatgctggaatccaggacgtttttcacga 1968
||||| | |||||||||||||||||||||||| |||||||| |||||||| |||||||||
Sbjct: 1857 acaagtgaattcatggcaccagctttcttgtggtgctggaagccaggacgcttttcacga 1798
Query: 1969 gaaacatagaccaaacggggtagctcattaccctcagtatcaagaccaccactgtgacca 2028
|||||||| || || || || ||||||||||| |||| |||||| || ||||| || ||
Sbjct: 1797 gaaacataaactaaccgcggaagctcattaccatcagaatcaagccctccactttggccc 1738
Query: 2029 aggaaaacctgaatcattccaggatggtccctggtattgtttcctggccatggtgtgcca 2088
| |||||||||||||||||| |||||||| ||||| || ||||| |||||||| || |||
Sbjct: 1737 aagaaaacctgaatcattcctggatggtctctggtgttatttccaggccatggggtccca 1678
Query: 2089 tcttgcatgatccatccttcctcagggactttttgtgccttagcaacaaggccatttacc 2148
|||||||| ||||||||||| ||||| || ||||| ||||| |||||||| ||||| |
Sbjct: 1677 tcttgcataatccatccttcttcaggcaccttttgcgccttggcaacaagcccattgata 1618
Query: 2149 ctaattttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaaggg 2208
| |||||| ||||||||||||||||||||||| || | |||||||| ||||| || ||
Sbjct: 1617 cgaattttaaattcttcatattctctcttcatagctctacggtctttgacaaaagatggc 1558
Query: 2209 tgcactttgtccttcaagtaatcaattttctgggagaagtaccattcaggagctctaggt 2268
|||||||| ||||||||||| ||||| || || | ||||||||||| ||||| | |||
Sbjct: 1557 tgcactttatccttcaagtagtcaatcttttgtgcaaagtaccattctggagcccgaggc 1498
Query: 2269 tcaatgttgtacttcttaacaaatggcacccattttctagcaaactctgaagtctcagct 2328
|||||| |||||||||| || ||||||||||| || | |||||||||||||||||
Sbjct: 1497 tcaatgctgtacttcttgcagaagggcacccatttcctggaaaactctgaagtctcagac 1438
Query: 2329 agtgcatcaaatgtcagcatagcagctccatcatcagatacatagcaagagac 2381
| || |||||||||| ||| ||||| ||||||||||| |||||||| |||||
Sbjct: 1437 aaagcttcaaatgtcaacattgcagcaccatcatcagagacatagcatgagac 1385
Score = 321 bits (162), Expect = 1e-085
Identities = 357/422 (84%)
Strand = Plus / Minus
Query: 1045 caatgccggctgaaaaggatttccactgaaccgagagcccaccggagcacctggttcaga 1104
|||||||| |||| ||| ||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 2733 caatgccgactgagaagaatttcaacagaacccagagcccatcgaagcacttggttcaga 2674
Query: 1105 cggtctgagagattgatgggagccgatcccttgaaggccggccgcttaggcatgcagtag 1164
|| || || ||||| || ||||| || || || ||||| || ||||| ||||| || ||
Sbjct: 2673 cgatcagaaagattaataggagcagaccctttaaaggctgggcgcttgggcatacaataa 2614
Query: 1165 atcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatcttccgtcacagaa 1224
|| |||||||| || || || |||||||| |||||||| ||||||||||| || ||||||
Sbjct: 2613 attgaccgccaaccccgggcatgcatcttaaacccagtaagaatatcttctgtaacagaa 2554
Query: 1225 ccatagatccacccaatctcagttccccattcaatcttgtcctcgtagccacaacttatg 1284
||||||||||| |||||||||| |||||| || | |||||||| || |||||||| |||
Sbjct: 2553 ccatagatccatccaatctcagatccccaatctgttttgtcctcatacccacaactaatg 2494
Query: 1285 acatggatagcttctttcagaagagattccggagtcgcagactgaggaacaccaccatat 1344
||||| ||||||||||| ||||||| ||| || || ||||||||||||||||||||||
Sbjct: 2493 acatgaatagcttctttaagaagagtttctggtgttgcagactgaggaacaccaccattc 2434
Query: 1345 tccatcagagtggacgcaacaaaagctgcagattggccaaatctcttctccaagctcatt 1404
||||| || ||||| ||||||||| | || || |||||||| |||||||||| |||||||
Sbjct: 2433 tccataagtgtggaagcaacaaaaacagctgactggccaaacctcttctccaggctcatt 2374
Query: 1405 tgagacataagaagtgatttctcatcatcaaatccagcgccttcaactccctcctctata 1464
|||||||| |||||||| |||||||||||||||||||| |||||||| || || ||||||
Sbjct: 2373 tgagacatgagaagtgacttctcatcatcaaatccagctccttcaacgccttcttctata 2314
Query: 1465 tc 1466
||
Sbjct: 2313 tc 2312
Score = 155 bits (78), Expect = 1e-035
Identities = 318/398 (79%)
Strand = Plus / Minus
Query: 436 cggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatcacccagaag 495
|||||||| |||||||| | ||| || ||||| || || || || ||||||||||||||
Sbjct: 3342 cggttctggcgacccatcaaaccttttaggaaaggatagagatggacgatcacccagaaa 3283
Query: 496 gcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgttgatggcgtag 555
|||||||| |||||||| ||||| |||||||| ||||| || || |||||||| || | |
Sbjct: 3282 gcgaagaaaagcttgccaaagagtggaccccatgactgataaccactgttgattgcatgg 3223
Query: 556 gagatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgggcgggatcaga 615
|| || ||||||||||| || |||| ||| | ||| |||| || || |||||||| ||
Sbjct: 3222 gatatcccggcaacaacacccaccaagttaacgatgaggagagttgttggcgggataagt 3163
Query: 616 agtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcatccgaggccttg 675
|| || ||||| ||||||| ||| || || || | || ||||| || || || ||||||
Sbjct: 3162 agagttgtccatttgaacaagtatagttcagcagaatcaccgtcctcgtctgatgccttg 3103
Query: 676 gaggtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggccctggaagacg 735
|| || || |||||||||||||| ||||| ||||| || ||||| | ||| ||||| ||
Sbjct: 3102 gacgtaacagtgaagttggtgtcaatgccagcaagtactttgagcaagccttggaaaaca 3043
Query: 736 gcgaagaggtgggcggagatgcctccgatgacccagaactgctcgttcctccaccactcg 795
|| || || ||||| || | || ||||||||||| ||||| || ||||||||||||||
Sbjct: 3042 gcaaaaagatgggctgaaacaccaccgatgacccaaaactgttcattcctccaccactca 2983
Query: 796 tcgatgcccacgccgctccacctcatctccaggatacc 833
|| || || || || |||||||||||||||| ||||||
Sbjct: 2982 tcaatcccaacaccactccacctcatctccaagatacc 2945
Score = 61.9 bits (31), Expect = 2e-007
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 2644 gcattacgcacaggatttgtgatccggtagtgcaagaagatgc 2686
|||||||||||||||||||| || |||||||||||||| ||||
Sbjct: 1122 gcattacgcacaggatttgttattcggtagtgcaagaaaatgc 1080
Score = 61.9 bits (31), Expect = 2e-007
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 2892 cttgtcctgcttcattttccagccatcaaccctctctttccaggcaacatt 2942
||||||||||||||| |||||||||||||| || || |||||||| |||||
Sbjct: 883 cttgtcctgcttcatcttccagccatcaactctttccttccaggccacatt 833
Score = 42.1 bits (21), Expect = 0.15
Identities = 63/77 (81%)
Strand = Plus / Minus
Query: 2707 acaatgaccatcctgtatggatttatcctggaggaaggaagtggaactttcctagataga 2766
||||| ||||||||||||||||| ||| | || ||||||| | ||| ||||| || |||
Sbjct: 1059 acaataaccatcctgtatggattaatcttagaagaaggaatggaaaccttcctcgaaaga 1000
Query: 2767 ggctggcgagtttcatc 2783
|| || |||| ||||||
Sbjct: 999 ggttgccgagcttcatc 983
>gb|CN549808.1|CN549808 GQ0241.B3_H11 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0241_H11 5', mRNA sequence
Length = 840
Score = 305 bits (154), Expect = 7e-081
Identities = 355/422 (84%)
Strand = Plus / Minus
Query: 1045 caatgccggctgaaaaggatttccactgaaccgagagcccaccggagcacctggttcaga 1104
|||||||| |||| ||| ||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 692 caatgccgactgagaagaatttcaacagaacccagagcccatcgaagcacttggttcaga 633
Query: 1105 cggtctgagagattgatgggagccgatcccttgaaggccggccgcttaggcatgcagtag 1164
|| || || ||||| || ||||| || || || ||||| || ||||| ||||| || ||
Sbjct: 632 cgatcagaaagattaataggagcagaccctttaaaggctgggcgcttgggcatacaataa 573
Query: 1165 atcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatcttccgtcacagaa 1224
|| |||||||| || || || |||||||| || ||||| ||||||||||| || ||||||
Sbjct: 572 attgaccgccaaccacgggcatgcatcttaaaaccagtaagaatatcttctgtaacagaa 513
Query: 1225 ccatagatccacccaatctcagttccccattcaatcttgtcctcgtagccacaacttatg 1284
||||||||||| |||||||||| |||||| || | |||||||| || |||||||| |||
Sbjct: 512 ccatagatccatccaatctcagatccccaatctgttttgtcctcatacccacaactaatg 453
Query: 1285 acatggatagcttctttcagaagagattccggagtcgcagactgaggaacaccaccatat 1344
||||| ||||||||||| ||||||| ||| || || ||||||||||||||||| ||||
Sbjct: 452 acatgaatagcttctttaagaagagtttctggtgttgcagactgaggaacaccgccattc 393
Query: 1345 tccatcagagtggacgcaacaaaagctgcagattggccaaatctcttctccaagctcatt 1404
||||| || ||||| ||||||||| | || || |||||||| |||||||||| |||||||
Sbjct: 392 tccataagtgtggaagcaacaaaaacagctgactggccaaacctcttctccaggctcatt 333
Query: 1405 tgagacataagaagtgatttctcatcatcaaatccagcgccttcaactccctcctctata 1464
|||||||| |||||||| |||||||||||||||||||| |||||||| || || ||||||
Sbjct: 332 tgagacatgagaagtgacttctcatcatcaaatccagctccttcaacgccttcttctata 273
Query: 1465 tc 1466
||
Sbjct: 272 tc 271
Score = 56.0 bits (28), Expect = 1e-005
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 1609 tcataaccatatagagctgttctgttgaaaacacagccagtgcccacataaactggtcct 1668
||||||||||| | || || ||||| || ||||| ||||| |||||||| || ||||||
Sbjct: 116 tcataaccatacaatgccgtcctgttaaagacacatccagtacccacatagacaggtcct 57
Query: 1669 tggatgccatcaagacctctcaagttaatatc 1700
|| || ||||| ||||| |||||||| |||||
Sbjct: 56 tgaataccatccagacccctcaagtttatatc 25
>gb|BP924070.1|BP924070 BP924070 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-027_K15.f 5', mRNA sequence
Length = 535
Score = 303 bits (153), Expect = 3e-080
Identities = 357/425 (84%)
Strand = Plus / Minus
Query: 1045 caatgccggctgaaaaggatttccactgaaccgagagcccaccggagcacctggttcaga 1104
|||||||| |||| ||| ||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 520 caatgccgactgagaagaatttcaacagaacctagagcccatcgaagcacttggttcaga 461
Query: 1105 cggtctgagagattgatgggagccgatcccttgaaggccggccgcttaggcatgcagtag 1164
|| || || ||||| || ||||| || || || ||||| || || || |||||||||||
Sbjct: 460 cgatcagaaagattaataggagcagaccctttaaaggctgggcgtttgggcatgcagtaa 401
Query: 1165 atcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatcttccgtcacagaa 1224
|| |||||||| || || || ||||||||||| ||||| ||||||||||| || ||||||
Sbjct: 400 attgaccgccaaccacgggcatgcatcttgaatccagtaagaatatcttctgtaacagaa 341
Query: 1225 ccatagatccacccaatctcagttccccattcaatcttgtcctcgtagccacaacttatg 1284
||||||||||| || ||||||| |||||| || | ||||||||||| ||||| || |||
Sbjct: 340 ccatagatccatcctatctcagatccccaatctgttttgtcctcgtaaccacagctgatg 281
Query: 1285 acatggatagcttctttcagaagagattccggagtcgcagactgaggaacaccaccatat 1344
||||| ||||| ||||| ||||||| ||| ||||| ||||||||||||||||| ||||
Sbjct: 280 acatgaatagcctctttaagaagagtttctggagttgcagactgaggaacaccgccattc 221
Query: 1345 tccatcagagtggacgcaacaaaagctgcagattggccaaatctcttctccaagctcatt 1404
||||| || ||||| ||||||||| | || || |||||||| |||||||||| |||| |
Sbjct: 220 tccatgagtgtggaagcaacaaaaacagctgactggccaaacctcttctccaggctcgtc 161
Query: 1405 tgagacataagaagtgatttctcatcatcaaatccagcgccttcaactccctcctctata 1464
|| ||||| |||||||| |||||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 160 tgtgacatgagaagtgacttctcatcatcaaatccagctccttcaacgccctcttctata 101
Query: 1465 tcttc 1469
|||||
Sbjct: 100 tcttc 96
>gb|CA931952.1|CA931952 MTU4TA.P25.A10 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 629
Score = 299 bits (151), Expect = 4e-079
Identities = 387/466 (83%)
Strand = Plus / Plus
Query: 1639 acacagccagtgcccacataaactggtccttggatgccatcaagacctctcaagttaata 1698
||||| ||||||||| |||| || |||||||| || ||||| | ||| | |||||| |||
Sbjct: 164 acacatccagtgcccgcatagacaggtccttgaataccatccaaaccccccaagtttata 223
Query: 1699 tcgaaaaacacggtgttcctgttggcatatcgatcattcctatcaataccatcgaacctc 1758
|| || ||||| || || | |||||||||||||||||| | ||||| ||||| || ||
Sbjct: 224 tcaaagaacacagtattgcgattggcatatcgatcattcttgtcaatgccatcaaatctt 283
Query: 1759 tggggaaactgaacatagcagacactccttcctaggttaggatccataaggaagcacata 1818
|| ||||| ||||||||||||||| |||| || ||||||||||| | ||| ||||||
Sbjct: 284 tgtggaaattgaacatagcagacatgttttccaagattaggatccatcatgaaacacata 343
Query: 1819 gcttccctgagagccttactgttgttgatgtagtgatcacaatcaagattcaacatgtat 1878
||||| || | |||||| || ||||| | |||||||||||| ||||||||||||| | |
Sbjct: 344 gcttctctcaaagccttgctattgtttacgtagtgatcacagtcaagattcaacaagaaa 403
Query: 1879 tgtccattggtaagcacagctgagacgcggacaagagcattcatggcaccagctttcttg 1938
| ||||| || ||||||||||| || || ||||| ||||||||||||||||||||||||
Sbjct: 404 ggcccattagttagcacagctgatacacgaacaagtgcattcatggcaccagctttcttg 463
Query: 1939 tgatgctggaatccaggacgtttttcacgagaaacatagaccaaacggggtagctcatta 1998
|| |||||||| || ||||| ||||||||||||||||| || || || || |||||||||
Sbjct: 464 tggtgctggaagcctggacgcttttcacgagaaacataaactaaccgtggcagctcatta 523
Query: 1999 ccctcagtatcaagaccaccactgtgaccaaggaaaacctgaatcattccaggatggtcc 2058
|| ||||||||||| || ||||| || || | |||||||||||||||||| ||||||||
Sbjct: 524 ccatcagtatcaagccctccactttgccctaagaaaacctgaatcattcctggatggtct 583
Query: 2059 ctggtattgtttcctggccatggtgtgccatcttgcatgatccatc 2104
||||| || ||| | |||||||| || ||||||||||| |||||||
Sbjct: 584 ctggtgttatttncaggccatggggtcccatcttgcataatccatc 629
>gb|CA932078.1|CA932078 MTU4TA.P26.F03 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 596
Score = 266 bits (134), Expect = 6e-069
Identities = 360/434 (82%), Gaps = 1/434 (0%)
Strand = Plus / Plus
Query: 1639 acacagccagtgcccacataaactggtccttggatgccatcaagacctctcaagttaata 1698
||||| |||||||||||||| || |||||||| || ||||| | ||| | |||||| |||
Sbjct: 161 acacatccagtgcccacatagacaggtccttgaataccatccaaaccccccaagtttata 220
Query: 1699 tcgaaaaacacggtgttcctgttggcatatcgatcattcctatcaataccatcgaacctc 1758
|| || ||||| || || | |||||||||||||||||| | ||||| ||||| || ||
Sbjct: 221 tcaaagaacacagtattgcgattggcatatcgatcattcttgtcaatgccatcaaatctt 280
Query: 1759 tggggaaactgaacatagcagacactccttcctaggttaggatccataaggaagcacata 1818
|| ||||| ||||||||||||||| |||| || ||||||||||| | ||| ||||||
Sbjct: 281 tgtggaaattgaacatagcagacatgttttccaagattaggatccatcatgaaacacata 340
Query: 1819 gcttccctgagagccttactgttgttgatgtagtgatcacaatcaagattcaacatgtat 1878
||||| || | |||||| || ||||| | |||||||||||| ||||||||||||| | |
Sbjct: 341 gcttctctcaaagccttgctattgtttacgtagtgatcacagtcaagattcaacaagaaa 400
Query: 1879 tgtccattggtaagcacagctgagacgcggacaagagcattcatggcaccagctttcttg 1938
| ||||| || ||||||||||| || || ||||| ||||||||||||||||||||||||
Sbjct: 401 ggcccattagttagcacagctgatacacgaacaagtgcattcatggcaccagctttcttg 460
Query: 1939 tgatgctggaatccaggacgtttttcacgagaaacatagaccaaacggggtagctcatta 1998
|| |||||||| || ||||| ||||||||||||||||| || || || || |||||||||
Sbjct: 461 tggtgctggaagcctggacgcttttcacgagaaacataaactaaccgtggcagctcatta 520
Query: 1999 ccctcagtatcaagaccaccactgtgaccaaggaaaacctgaatcattccaggatggtcc 2058
|| ||||||||||| || ||||| || || | | |||||||||||||||| ||||||||
Sbjct: 521 ccatcagtatcaagccctccactttgccctaag-aaacctgaatcattcctggatggtct 579
Query: 2059 ctggtattgtttcc 2072
||||| || |||||
Sbjct: 580 ctggtgttatttcc 593
>gb|CX169886.1|CX169886 G10_69-94_14.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 620
Score = 262 bits (132), Expect = 9e-068
Identities = 369/448 (82%)
Strand = Plus / Minus
Query: 1609 tcataaccatatagagctgttctgttgaaaacacagccagtgcccacataaactggtcct 1668
||||||||||| | || || ||||| || ||||| ||||| |||||||| || ||||||
Sbjct: 463 tcataaccatacaatgccgtcctgttaaagacacatccagtacccacatagacaggtcct 404
Query: 1669 tggatgccatcaagacctctcaagttaatatcgaaaaacacggtgttcctgttggcatat 1728
|| || ||||| ||||| |||||||| ||||| || || || || || | |||||||||
Sbjct: 403 tgaataccatccagacccctcaagtttatatcaaagaatacagtattgcgattggcatat 344
Query: 1729 cgatcattcctatcaataccatcgaacctctggggaaactgaacatagcagacactcctt 1788
||||||||||| ||||| ||||| || || || ||||||||||||||||||||| |
Sbjct: 343 cgatcattcctgtcaatgccatcaaatctttgtggaaactgaacatagcagacatgtttc 284
Query: 1789 cctaggttaggatccataaggaagcacatagcttccctgagagccttactgttgttgatg 1848
|| |||||||||||||| | ||| ||||||||||| || | |||||| || ||||| |||
Sbjct: 283 ccaaggttaggatccatcatgaaacacatagcttctctcaaagccttgctattgtttatg 224
Query: 1849 tagtgatcacaatcaagattcaacatgtattgtccattggtaagcacagctgagacgcgg 1908
|| |||||||||||||||||||||| | | | ||||| || || || ||||| || ||
Sbjct: 223 taatgatcacaatcaagattcaacaagaaaggcccattagttagaacggctgatacacga 164
Query: 1909 acaagagcattcatggcaccagctttcttgtgatgctggaatccaggacgtttttcacga 1968
||||| | |||||||||||| ||||||||||| |||||||| || ||||| |||||||||
Sbjct: 163 acaagtgaattcatggcaccggctttcttgtggtgctggaagcccggacgcttttcacga 104
Query: 1969 gaaacatagaccaaacggggtagctcattaccctcagtatcaagaccaccactgtgacca 2028
|||||||| || || || || ||||||||||| |||| |||||| || ||||| || ||
Sbjct: 103 gaaacataaactaaccgcggaagctcattaccatcagaatcaagccctccactttggccc 44
Query: 2029 aggaaaacctgaatcattccaggatggt 2056
| |||||||||||||||||| |||||||
Sbjct: 43 aagaaaacctgaatcattcctggatggt 16
>gb|CA930801.1|CA930801 MTU2TA.P10.D08 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 530
Score = 228 bits (115), Expect = 1e-057
Identities = 304/367 (82%)
Strand = Plus / Plus
Query: 1639 acacagccagtgcccacataaactggtccttggatgccatcaagacctctcaagttaata 1698
||||| |||||||||||||| || |||||||| || ||||| | ||| |||||||| |||
Sbjct: 164 acacatccagtgcccacatagacaggtccttgaataccatccaaacccctcaagtttata 223
Query: 1699 tcgaaaaacacggtgttcctgttggcatatcgatcattcctatcaataccatcgaacctc 1758
|| || ||||| || || | |||||||||||||||||| | ||||| ||||| || ||
Sbjct: 224 tcaaagaacacagtattgcgattggcatatcgatcattcttgtcaatgccatcaaatctt 283
Query: 1759 tggggaaactgaacatagcagacactccttcctaggttaggatccataaggaagcacata 1818
|| ||||| ||||||||||||||| |||| || ||||||||||| | ||| ||||||
Sbjct: 284 tgtggaaattgaacatagcagacatgttttccaagattaggatccatcatgaaacacata 343
Query: 1819 gcttccctgagagccttactgttgttgatgtagtgatcacaatcaagattcaacatgtat 1878
||||| || | ||||| || ||||| | |||||||||||| ||||||||||||| | |
Sbjct: 344 gcttctctcaaagcctcgctattgtttacgtagtgatcacagtcaagattcaacaagaaa 403
Query: 1879 tgtccattggtaagcacagctgagacgcggacaagagcattcatggcaccagctttcttg 1938
| ||||| || ||||||||||| || || ||||| ||||||||||||||||||||||||
Sbjct: 404 ggcccattagttagcacagctgatacacgaacaagtgcattcatggcaccagctttcttg 463
Query: 1939 tgatgctggaatccaggacgtttttcacgagaaacatagaccaaacggggtagctcatta 1998
|| |||||||| || ||||| ||||||||||||||||| || || || || |||||||||
Sbjct: 464 tggtgctggaagcctggacgcttttcacgagaaacataaactaaccgtggcagctcatta 523
Query: 1999 ccctcag 2005
|| ||||
Sbjct: 524 ccatcag 530
>gb|CN524693.1|CN524693 GQ015M08.T3_H02 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M08_H02 5', mRNA sequence
Length = 770
Score = 206 bits (104), Expect = 5e-051
Identities = 371/460 (80%)
Strand = Plus / Minus
Query: 1027 tagccgtaccatagggggcaatgccggctgaaaaggatttccactgaaccgagagcccac 1086
||||| ||||||| |||||| || || |||| ||| ||||| || ||||| | ||||||
Sbjct: 597 tagccataccatatggggcagtgacgactgagaagaatttcaacggaacccaaggcccac 538
Query: 1087 cggagcacctggttcagacggtctgagagattgatgggagccgatcccttgaaggccggc 1146
|| ||||| || || ||||| || || ||||| |||||||| |||||||| ||||| ||
Sbjct: 537 cgaagcacttgatttagacgatcagaaagattaatgggagcagatcccttaaaggcagga 478
Query: 1147 cgcttaggcatgcagtagatcgaccgccagcctcgtgcgtgcatcttgaacccagtgaga 1206
||||| |||||||| ||||| || | ||| || || || ||||||||||| || || ||
Sbjct: 477 cgctttggcatgcaatagattgatctccacccacgagcatgcatcttgaatcctgtaagg 418
Query: 1207 atatcttccgtcacagaaccatagatccacccaatctcagttccccattcaatcttgtcc 1266
||||||||||| ||||||||||| ||||| || || ||| ||||||| || ||||||
Sbjct: 417 atatcttccgtaacagaaccatatatccatcctatttcacttccccagtctgacttgtct 358
Query: 1267 tcgtagccacaacttatgacatggatagcttctttcagaagagattccggagtcgcagac 1326
||||| ||||| || |||||||| ||||||||||| |||||||| || || || || |||
Sbjct: 357 tcgtatccacagctgatgacatgaatagcttctttgagaagagactctggggtggcggac 298
Query: 1327 tgaggaacaccaccatattccatcagagtggacgcaacaaaagctgcagattggccaaat 1386
| ||||||||||| | ||||| || ||||| |||||||| | | ||||||||||||
Sbjct: 297 tctggaacaccaccgttctccataagggtggaagcaacaaacacagttgattggccaaat 238
Query: 1387 ctcttctccaagctcatttgagacataagaagtgatttctcatcatcaaatccagcgcct 1446
|| ||||| | ||||||||||||| || | |||||| |||||||| ||||||| |||
Sbjct: 237 cttttctcaagtgtcatttgagacatgagcaatgatttttcatcatcgaatccagtacct 178
Query: 1447 tcaactccctcctctatatcttcaagattgaatactggca 1486
||||| || || ||||||||||| | ||||||||| ||||
Sbjct: 177 tcaaccccttcttctatatcttctaaattgaataccggca 138
>gb|CA927446.1|CA927446 MTU6CR.P9.B04 Aspen root cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 648
Score = 186 bits (94), Expect = 4e-045
Identities = 247/298 (82%)
Strand = Plus / Plus
Query: 1045 caatgccggctgaaaaggatttccactgaaccgagagcccaccggagcacctggttcaga 1104
|||||||| |||| ||| ||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 332 caatgccgactgagaagaatttcaacagaacccagagcccatcgaagcacttggttcaga 391
Query: 1105 cggtctgagagattgatgggagccgatcccttgaaggccggccgcttaggcatgcagtag 1164
|| || || ||||| || ||||| || || || |||||||| ||||| ||||| || ||
Sbjct: 392 cgatcagaaagattaataggagcagaccctttaaaggccgggcgcttgggcatacaataa 451
Query: 1165 atcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatcttccgtcacagaa 1224
|| |||||||| || || || |||||||| || ||||| ||||||||||| || ||||||
Sbjct: 452 attgaccgccaaccacgggcatgcatcttaaaaccagtaagaatatcttctgtaacagaa 511
Query: 1225 ccatagatccacccaatctcagttccccattcaatcttgtcctcgtagccacaacttatg 1284
||||||||||| |||||||||| |||||| || | |||| ||| || |||||||| |||
Sbjct: 512 ccatagatccatccaatctcagatccccaatctgttttgttctcatacccacaactaatg 571
Query: 1285 acatggatagcttctttcagaagagattccggagtcgcagactgaggaacaccaccat 1342
||||| ||||||||||| |||||| ||| || || ||||||||||||||||| ||||
Sbjct: 572 acatgaatagcttctttaagaagaagttctggtgttgcagactgaggaacaccgccat 629
Score = 67.9 bits (34), Expect = 3e-009
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 760 ccgatgacccagaactgctcgttcctccaccactcgtcgatgcccacgccgctccacctc 819
||||||||||| ||||| || |||||||||||||| || || || || || |||||||||
Sbjct: 47 ccgatgacccaaaactgttcattcctccaccactcatcaatcccaacaccactccacctc 106
Query: 820 atctccaggatacc 833
||||||| ||||||
Sbjct: 107 atctccaagatacc 120
>gb|CF234438.1|CF234438 Ptajxojxo2F10F1012 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 168 bits (85), Expect = 1e-039
Identities = 355/445 (79%)
Strand = Plus / Minus
Query: 436 cggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatcacccagaag 495
|||||||| |||||||| | ||| |||||||| ||||| || || |||||||||||||||
Sbjct: 465 cggttctggcgacccatcaaacctttgaggaaagggtagagatggacgatcacccagaag 406
Query: 496 gcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgttgatggcgtag 555
|| ||||| |||||||| ||||| || ||||||||||| || || ||||||||||||| |
Sbjct: 405 gcaaagaaaagcttgccaaagagtgggccccacgactgataaccactgttgatggcgtgg 346
Query: 556 gagatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgggcgggatcaga 615
|| || ||||||||||| || |||| ||| | ||| |||| || || || ||||| ||
Sbjct: 345 gatatcccggcaacaacacctaccaagttaacgatgaggagagttgttggtgggataagc 286
Query: 616 agtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcatccgaggccttg 675
|| || ||||| || ||||||||||| |||| ||| || ||||| || || || | ||||
Sbjct: 285 agagttgtccatttaaacatgtacagttccgtgaaatcaccgtcctcgtctgatgacttg 226
Query: 676 gaggtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggccctggaagacg 735
|| ||||| |||||| ||||||| ||||| || || || ||||| | ||| ||||| ||
Sbjct: 225 gacgtgacagtgaagctggtgtcaatgccagcgagtactttgagcaagccttggaaaaca 166
Query: 736 gcgaagaggtgggcggagatgcctccgatgacccagaactgctcgttcctccaccactcg 795
|| || || ||||| || | || || || ||||| ||||| |||||||||||||| ||
Sbjct: 165 gcaaaaagatgggctgaaacaccaccaataacccaaaactgttcgttcctccaccattca 106
Query: 796 tcgatgcccacgccgctccacctcatctccaggatacccgtggcgaagatcgagatgaag 855
|| || || || || |||||||||||||||| ||||| || || ||||| || | |||
Sbjct: 105 tcaatcccaacaccactccacctcatctccaaaataccggttgcaaagatggaaagaaag 46
Query: 856 agagagatgaaccagatactagcga 880
||||| || ||||| ||||| ||||
Sbjct: 45 agagaaataaaccatatacttgcga 21
>gb|DT473511.1|DT473511 WS01229.BR_N17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_N17 5', mRNA sequence
Length = 912
Score = 165 bits (83), Expect = 2e-038
Identities = 269/331 (81%)
Strand = Plus / Minus
Query: 2296 acccattttctagcaaactctgaagtctcagctagtgcatcaaatgtcagcatagcagct 2355
||||||||||||||||| || || || |||| || || |||||||||| ||||||||||
Sbjct: 816 acccattttctagcaaattcagacgtttcagatatggcttcaaatgtcaacatagcagct 757
Query: 2356 ccatcatcagatacatagcaagagaccttatccacaggatagtccacagcgagaatggat 2415
|||||||| || |||||||||||||| || || || || || || || || ||||| |||
Sbjct: 756 ccatcatctgaaacatagcaagagactttgtcgactgggtaatctactgcaagaatagat 697
Query: 2416 agcacggtattggcagtgacaagaggaggctccttcattgggtcgacagtactgacaaaa 2475
||||| |||||||| ||||| || ||||| ||||| | |||||||| ||||||||||||
Sbjct: 696 agcacagtattggctgtgaccagtggaggttcctttaaagggtcgactgtactgacaaaa 637
Query: 2476 atgtcaacagcagccaactgagatggctcaccttcccggtcataccttaatgcgagtcta 2535
||||||||||||||||| ||||| ||||| ||||| ||||| || | | || ||
Sbjct: 636 atgtcaacagcagccaattgagacggctctccttctttctcatatctgagagatagcctg 577
Query: 2536 tcaaggtaagtctcgcggttgattggaaaccactttggaaactgatccaatatccaggaa 2595
||||| || ||||| || || | ||||| ||| || || || |||||||||||||| ||
Sbjct: 576 tcaagatatgtctcacgattcactggaagccatttagggaattgatccaatatccatgat 517
Query: 2596 agagcaaaccagatctcacatataacagata 2626
| |||||||| |||||||| ||||||||||
Sbjct: 516 attgcaaaccatatctcacagataacagata 486
Score = 56.0 bits (28), Expect = 1e-005
Identities = 79/96 (82%)
Strand = Plus / Minus
Query: 2710 atgaccatcctgtatggatttatcctggaggaaggaagtggaactttcctagatagaggc 2769
|||||||||||||| || || ||||| |||||||||| || ||| ||||| || || |||
Sbjct: 402 atgaccatcctgtaagggttaatcctagaggaaggaattgaaaccttccttgagaggggc 343
Query: 2770 tggcgagtttcatcgtttaataaggcatcttccatg 2805
||||| | |||||| |||| ||| | ||| ||||||
Sbjct: 342 tggcgggcttcatcatttagtaaagaatcatccatg 307
>gb|AY196961.1| Populus tremuloides cellulose synthase 6 (CesA6) mRNA, complete cds
Length = 3773
Score = 165 bits (83), Expect = 2e-038
Identities = 431/547 (78%)
Strand = Plus / Minus
Query: 1634 tgaaaacacagccagtgcccacataaactggtccttggatgccatcaagacctctcaagt 1693
|||||||||| ||||| || ||||| | |||||||| |||||||| | |||||||| |
Sbjct: 1982 tgaaaacacatccagtcccgacatatataggtccttgaatgccatctaaacctctcatat 1923
Query: 1694 taatatcgaaaaacacggtgttcctgttggcatatcgatcattcctatcaataccatcga 1753
| ||||| || || || || |||| |||||||||||||||| |||| ||||| ||||| |
Sbjct: 1922 tgatatcaaagaatacagtattccggttggcatatcgatcactcctgtcaatgccatcaa 1863
Query: 1754 acctctggggaaactgaacatagcagacactccttcctaggttaggatccataaggaagc 1813
||||||| || ||||| |||||||| || ||| | || || |||||||| | ||| |
Sbjct: 1862 acctctgtgggaactggacatagcacactctcttcccaagcaatggatccatcatgaaac 1803
Query: 1814 acatagcttccctgagagccttactgttgttgatgtagtgatcacaatcaagattcaaca 1873
|||| ||||| || |||||||||||||| |||||||||||||||||||| | |||||| |
Sbjct: 1802 acattgcttctctaagagccttactgttattgatgtagtgatcacaatccaaattcaaaa 1743
Query: 1874 tgtattgtccattggtaagcacagctgagacgcggacaagagcattcatggcaccagctt 1933
||| | |||| || ||||| || ||||| | ||| | ||||||||| || ||||| |
Sbjct: 1742 gatatggagcatttgttagcacggcagagactctgaccaaagcattcatagctccagcct 1683
Query: 1934 tcttgtgatgctggaatccaggacgtttttcacgagaaacatagaccaaacggggtagct 1993
| ||||| || | |||||||| | ||||| | |||||||| |||| ||| |||| |
Sbjct: 1682 ttttgtggtgattaaatccaggtctcttttctctggaaacatataccagacgtggtaatt 1623
Query: 1994 cattaccctcagtatcaagaccaccactgtgaccaaggaaaacctgaatcattccaggat 2053
| || || ||||| ||| | || ||||| || |||||||||||||||||||||||||| |
Sbjct: 1622 cgtttccatcagtgtcatgccctccactttggccaaggaaaacctgaatcattccagggt 1563
Query: 2054 ggtccctggtattgtttcctggccatggtgtgccatcttgcatgatccatccttcctcag 2113
| || | | ||| || || |||||||| || ||||| ||||| ||||||| || || |
Sbjct: 1562 gatcacggacattattcccaggccatggagtaccatcctgcattgtccatccatcttctg 1503
Query: 2114 ggactttttgtgccttagcaacaaggccatttaccctaattttgaattcttcatattctc 2173
|||| || || ||||| ||||| | |||| | || |||||| || |||||||| ||||
Sbjct: 1502 ggaccttatgagccttggcaaccaaagcattgatccgaattttaaactcttcatactctc 1443
Query: 2174 tcttcat 2180
|||||||
Sbjct: 1442 tcttcat 1436
Score = 65.9 bits (33), Expect = 1e-008
Identities = 120/149 (80%)
Strand = Plus / Minus
Query: 2335 tcaaatgtcagcatagcagctccatcatcagatacatagcaagagaccttatccacagga 2394
|||||||||||||||||||| ||||||||||| ||||| || || ||||| || |||||
Sbjct: 1281 tcaaatgtcagcatagcagcaccatcatcagaaacataacatgaaaccttgtcaacaggg 1222
Query: 2395 tagtccacagcgagaatggatagcacggtattggcagtgacaagaggaggctccttcatt 2454
|| || || || |||||||| || || || || || || || ||||| ||||| |||| |
Sbjct: 1221 taatcaactgcaagaatggacagaaccgtgtttgcggtcaccagagggggctctttcaat 1162
Query: 2455 gggtcgacagtactgacaaaaatgtcaac 2483
|| || || ||||| ||| | ||||||||
Sbjct: 1161 ggatcaacggtactaacatatatgtcaac 1133
Score = 56.0 bits (28), Expect = 1e-005
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 757 cctccgatgacccagaactgctcgttcctccaccactcgtcgatgcccacgccgctccac 816
|||||||| |||||||| || ||||| |||||||||||||| || || || || |||||
Sbjct: 2877 cctccgatcacccagaattgttcgtttctccaccactcgtcaataccaaccccactccat 2818
Query: 817 ctcatctccaggatac 832
||||| ||||| ||||
Sbjct: 2817 ctcatttccagtatac 2802
Score = 48.1 bits (24), Expect = 0.002
Identities = 75/92 (81%)
Strand = Plus / Minus
Query: 1219 acagaaccatagatccacccaatctcagttccccattcaatcttgtcctcgtagccacaa 1278
||||||||||| |||||||| | ||| | |||||||| | || || || ||||||||
Sbjct: 2415 acagaaccataaatccaccctacctctttgccccattctgttttatcttcatagccacag 2356
Query: 1279 cttatgacatggatagcttctttcagaagaga 1310
|| ||||||||||| |||||||| || |||||
Sbjct: 2355 ctaatgacatggatggcttctttaagcagaga 2324
>gb|AJ779945.1|AJ779945 AJ779945 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000800009G06F1, mRNA sequence
Length = 735
Score = 163 bits (82), Expect = 6e-038
Identities = 391/494 (79%)
Strand = Plus / Minus
Query: 1882 ccattggtaagcacagctgagacgcggacaagagcattcatggcaccagctttcttgtga 1941
|||||||| || |||||||| || || | || |||||||| || || ||||||||||||
Sbjct: 524 ccattggtcagtacagctgaaactcgaatcagtgcattcattgctccggctttcttgtga 465
Query: 1942 tgctggaatccaggacgtttttcacgagaaacatagaccaaacggggtagctcattaccc 2001
|||||||||||||| | ||||||||||||||||| || | ||| ||||||||||| ||
Sbjct: 464 tgctggaatccaggtctcttttcacgagaaacatatacaagacgaggtagctcatttcca 405
Query: 2002 tcagtatcaagaccaccactgtgaccaaggaaaacctgaatcattccaggatggtccctg 2061
|| ||||| || || ||||||||||| | ||| ||||| |||||||| || || ||||||
Sbjct: 404 tctgtatcgagccccccactgtgacctaagaacacctggatcattcctgggtgatccctg 345
Query: 2062 gtattgtttcctggccatggtgtgccatcttgcatgatccatccttcctcagggactttt 2121
| ||| ||||| ||||| || || ||||| ||||| |||| ||||| || || | ||
Sbjct: 344 ggattatttccaggccacggagttccatcctgcattgtccaaccttcttctggcatcttc 285
Query: 2122 tgtgccttagcaacaaggccatttaccctaattttgaattcttcatattctctcttcatg 2181
|| || || |||||||| |||| | || | ||||||||||||||||||||||||||
Sbjct: 284 tgagctttggcaacaagagcattgatccgcaccttgaattcttcatattctctcttcatt 225
Query: 2182 gcccggcggtctttaacaaatgaagggtgcactttgtccttcaagtaatcaattttctgg 2241
|| ||||| ||||| ||||| ||||| || | |||||||||| |||||||| || |||
Sbjct: 224 gctcggcgctctttcacaaaagaaggctgtatcttgtccttcagataatcaatcttttgg 165
Query: 2242 gagaagtaccattcaggagctctaggttcaatgttgtacttcttaacaaatggcacccat 2301
|| || || | || || || || || ||||| |||| |||||| || ||||||||
Sbjct: 164 gaaaaataaaactcgggggccctgggctcaatattgtgcttcttgcagaaaggcacccac 105
Query: 2302 tttctagcaaactctgaagtctcagctagtgcatcaaatgtcagcatagcagctccatca 2361
|| || |||||||||| ||| |||| || || |||||||||| |||||| | ||||||
Sbjct: 104 ttccttgcaaactctgcagtttcagaaagggcttcaaatgtcaacatagctgaaccatca 45
Query: 2362 tcagatacatagca 2375
|| || ||||||||
Sbjct: 44 tctgaaacatagca 31
>gb|AY162181.1| Populus tremuloides cellulose synthase (CesA4) mRNA, complete cds
Length = 3640
Score = 163 bits (82), Expect = 6e-038
Identities = 265/326 (81%)
Strand = Plus / Minus
Query: 1882 ccattggtaagcacagctgagacgcggacaagagcattcatggcaccagctttcttgtga 1941
|||||||| || |||||||| || || | || |||||||| || || ||||||||||||
Sbjct: 1703 ccattggtcagtacagctgaaactcgaatcagtgcattcattgctccggctttcttgtga 1644
Query: 1942 tgctggaatccaggacgtttttcacgagaaacatagaccaaacggggtagctcattaccc 2001
|||||||||||||| | ||||||||||||||||| || | ||| ||||||||||| ||
Sbjct: 1643 tgctggaatccaggtctcttttcacgagaaacatatacaagacgaggtagctcatttcca 1584
Query: 2002 tcagtatcaagaccaccactgtgaccaaggaaaacctgaatcattccaggatggtccctg 2061
|| ||||| || || ||||||||||| | ||| |||||||||||||| || || ||||||
Sbjct: 1583 tccgtatcgagccccccactgtgacctaagaacacctgaatcattcctgggtgatccctg 1524
Query: 2062 gtattgtttcctggccatggtgtgccatcttgcatgatccatccttcctcagggactttt 2121
| ||| ||||| |||||||| || ||||| ||||| |||| ||||| || || | |||
Sbjct: 1523 ggattatttccaggccatggagttccatcctgcattgtccaaccttcttctggcatcttt 1464
Query: 2122 tgtgccttagcaacaaggccatttaccctaattttgaattcttcatattctctcttcatg 2181
|| || || |||||||| |||| | || | |||||||||||||||||||| |||||
Sbjct: 1463 tgagctttggcaacaagagcattgatccgcaccttgaattcttcatattctcttttcatt 1404
Query: 2182 gcccggcggtctttaacaaatgaagg 2207
|| ||||| ||||| ||||| |||||
Sbjct: 1403 gctcggcgctctttcacaaaagaagg 1378
Score = 117 bits (59), Expect = 3e-024
Identities = 233/291 (80%)
Strand = Plus / Minus
Query: 2335 tcaaatgtcagcatagcagctccatcatcagatacatagcaagagaccttatccacagga 2394
|||||||||| |||||| | |||||||| || |||||||| || || || || |||||
Sbjct: 1250 tcaaatgtcaacatagctgaaccatcatctgaaacatagcatgatactttgtcgacaggg 1191
Query: 2395 tagtccacagcgagaatggatagcacggtattggcagtgacaagaggaggctccttcatt 2454
|| || ||||| |||||||| | ||| || || || || |||| |||||| || |||||
Sbjct: 1190 taatcaacagcaagaatggacaacacagtgtttgctgttacaataggaggttctttcatg 1131
Query: 2455 gggtcgacagtactgacaaaaatgtcaacagcagccaactgagatggctcaccttcccgg 2514
|| || || ||||| ||||| ||||||| || ||| ||||| ||||| || || || ||
Sbjct: 1130 ggatccactgtactaacaaagatgtcaataggagctaactgtgatggttctccatcacga 1071
Query: 2515 tcataccttaatgcgagtctatcaaggtaagtctcgcggttgattggaaaccactttgga 2574
||||| |||||||| || || || |||||||||||||| ||||| || | ||| ||||||
Sbjct: 1070 tcatatcttaatgctagcctgtcgaggtaagtctcgcgattgataggcatccattttgga 1011
Query: 2575 aactgatccaatatccaggaaagagcaaaccagatctcacatataacagat 2625
|||||||||| | |||||| | |||||||| |||||||| |||||||||
Sbjct: 1010 aactgatccagaagccaggacaaggcaaaccaaatctcacagataacagat 960
Score = 95.6 bits (48), Expect = 1e-017
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 1186 tgcatcttgaacccagtgagaatatcttccgtcacagaaccatagatccacccaatctca 1245
|||||||| |||||||| | ||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 2402 tgcatcttaaacccagtcaaaatatcttctgtaacagacccatagatccatccaatctct 2343
Query: 1246 gttccccattcaatcttgtcctcgtagccacaacttatgacatggatagcttctttcaga 1305
| |||||||| ||||||| || || ||||| || || ||||||||||||||||||| |
Sbjct: 2342 ttggcccattcagtcttgtcttcatatccacagctaataacatggatagcttctttcaaa 2283
Query: 1306 agag 1309
||||
Sbjct: 2282 agag 2279
Score = 61.9 bits (31), Expect = 2e-007
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 499 aagaagagcttgccgaagagcggaccccacgactggtacccgctgttgatggcgtagga 557
|||||||||||||| ||||| |||||||| |||||||| || ||||| ||||| |||||
Sbjct: 3089 aagaagagcttgccaaagagaggaccccatgactggtatccactgtttatggcatagga 3031
Score = 52.0 bits (26), Expect = 2e-004
Identities = 107/134 (79%)
Strand = Plus / Minus
Query: 658 tcttcatccgaggccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttg 717
|||||||| || ||||| || ||||| ||||||||||| || || || |||||||||||
Sbjct: 2930 tcttcatcagatgcctttgaagtgacagtgaagttggtatcaatacctgcaagcaccttc 2871
Query: 718 aggaggccctggaagacggcgaagaggtgggcggagatgcctccgatgacccagaactgc 777
| || || || |||||||| ||||| || || || | || || ||||||||||| ||
Sbjct: 2870 aaaagtccttgaaagacggcaaagagatgagctgatgtaccaccaatgacccagaattgt 2811
Query: 778 tcgttcctccacca 791
|| |||||||||||
Sbjct: 2810 tcattcctccacca 2797
>gb|AJ779545.1|AJ779545 AJ779545 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000800003H02F1, mRNA sequence
Length = 713
Score = 155 bits (78), Expect = 1e-035
Identities = 390/494 (78%)
Strand = Plus / Minus
Query: 1882 ccattggtaagcacagctgagacgcggacaagagcattcatggcaccagctttcttgtga 1941
|||||||| || |||||||| || || | || |||||||| || || ||||||||||||
Sbjct: 501 ccattggtcagtacagctgaaactcgaatcagtgcattcattgctccggctttcttgtga 442
Query: 1942 tgctggaatccaggacgtttttcacgagaaacatagaccaaacggggtagctcattaccc 2001
|||||||||||||| | ||||||||||||||||| || | ||| ||||||||||| ||
Sbjct: 441 tgctggaatccaggtctcttttcacgagaaacatatacaagacgaggtagctcatttcca 382
Query: 2002 tcagtatcaagaccaccactgtgaccaaggaaaacctgaatcattccaggatggtccctg 2061
|| ||||| || || ||||||||||| | ||| ||||| |||||||| || || ||||||
Sbjct: 381 tctgtatcgagccccccactgtgacctaagaacacctggatcattcctgggtgatccctg 322
Query: 2062 gtattgtttcctggccatggtgtgccatcttgcatgatccatccttcctcagggactttt 2121
| ||| ||||| ||||| || || || || ||||| |||| ||||| || || | ||
Sbjct: 321 ggattatttccaggccacggagttccgtcctgcattgtccaaccttcttctggcatcttc 262
Query: 2122 tgtgccttagcaacaaggccatttaccctaattttgaattcttcatattctctcttcatg 2181
|| || || |||||||| |||| | || | ||||||||||||||||||||||||||
Sbjct: 261 tgagctttggcaacaagagcattgatccgcaccttgaattcttcatattctctcttcatt 202
Query: 2182 gcccggcggtctttaacaaatgaagggtgcactttgtccttcaagtaatcaattttctgg 2241
|| ||||| ||||| ||||| ||||| || | |||||||||| |||||||| || |||
Sbjct: 201 gctcggcgctctttcacaaaagaaggctgtatcttgtccttcagataatcaatcttttgg 142
Query: 2242 gagaagtaccattcaggagctctaggttcaatgttgtacttcttaacaaatggcacccat 2301
|| || || | || || || || || ||||| |||| |||||| || ||||||||
Sbjct: 141 gaaaaataaaactcgggggccctgggctcaatattgtgcttcttgcagaaaggcacccac 82
Query: 2302 tttctagcaaactctgaagtctcagctagtgcatcaaatgtcagcatagcagctccatca 2361
|| || |||||||||| ||| |||| || || |||||||||| |||||| | ||||||
Sbjct: 81 ttccttgcaaactctgcagtttcagaaagggcctcaaatgtcaacatagctgaaccatca 22
Query: 2362 tcagatacatagca 2375
|| || ||||||||
Sbjct: 21 tctgaaacatagca 8
>gb|AY330165.1| Populus tremuloides CesA5A-like mRNA, partial cds
Length = 566
Score = 151 bits (76), Expect = 2e-034
Identities = 211/256 (82%)
Strand = Plus / Minus
Query: 1231 atccacccaatctcagttccccattcaatcttgtcctcgtagccacaacttatgacatgg 1290
|||||||| || ||| ||||||| || ||||||| ||||| ||||| || ||||||||
Sbjct: 557 atccaccctatttcacttccccagtctgtcttgtcttcgtatccacagctgatgacatga 498
Query: 1291 atagcttctttcagaagagattccggagtcgcagactgaggaacaccaccatattccatc 1350
||||||||||| |||||||| || || || ||||||| ||||||||| |||| |||||
Sbjct: 497 atagcttctttgagaagagactctggggtggcagactcaggaacaccgccattctccata 438
Query: 1351 agagtggacgcaacaaaagctgcagattggccaaatctcttctccaagctcatttgagac 1410
|||||||| |||||||| | | |||||||||||||| ||||| | |||||||||||
Sbjct: 437 agagtggaagcaacaaacacagttgattggccaaatcttttctcaagtgtcatttgagac 378
Query: 1411 ataagaagtgatttctcatcatcaaatccagcgccttcaactccctcctctatatcttca 1470
|| || | |||||| |||||||| ||||||| |||||||| || || |||||||||||
Sbjct: 377 atgagcaatgatttttcatcatcgaatccagtaccttcaaccccttcttctatatcttct 318
Query: 1471 agattgaatactggca 1486
| ||||||||| ||||
Sbjct: 317 aaattgaataccggca 302
Score = 89.7 bits (45), Expect = 7e-016
Identities = 141/173 (81%)
Strand = Plus / Minus
Query: 1606 ggctcataaccatatagagctgttctgttgaaaacacagccagtgcccacataaactggt 1665
|||||||| ||||| | || ||||| ||||||||||| || || |||||||| || ||
Sbjct: 173 ggctcatagccatacaaggccgttctattgaaaacacaccctgtacccacatatacaggg 114
Query: 1666 ccttggatgccatcaagacctctcaagttaatatcgaaaaacacggtgttcctgttggca 1725
|||||||| ||||| | ||||| || || ||||| || || || ||||| | |||||||
Sbjct: 113 ccttggattccatccaatcctcttaaatttatatcaaagaaaacagtgttacggttggca 54
Query: 1726 tatcgatcattcctatcaataccatcgaacctctggggaaactgaacatagca 1778
|||||||| || |||||||| ||||| || ||||| || ||||||||||||||
Sbjct: 53 tatcgatcgtttctatcaatcccatcaaatctctgagggaactgaacatagca 1
>gb|BU823358.1|BU823358 UB51DPD11 Populus tremula cambium cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 609
Score = 147 bits (74), Expect = 4e-033
Identities = 389/494 (78%)
Strand = Plus / Minus
Query: 1882 ccattggtaagcacagctgagacgcggacaagagcattcatggcaccagctttcttgtga 1941
|||||||| || |||||||| || || | || |||||||| || || ||||||||||||
Sbjct: 516 ccattggtcagtacagctgaaactcgaatcagtgcattcattgctccggctttcttgtga 457
Query: 1942 tgctggaatccaggacgtttttcacgagaaacatagaccaaacggggtagctcattaccc 2001
|||||||||||||| | ||||||||||| ||||| || | ||| ||||||||||| ||
Sbjct: 456 tgctggaatccaggcctcttttcacgagatacatatacaagacgaggtagctcatttcca 397
Query: 2002 tcagtatcaagaccaccactgtgaccaaggaaaacctgaatcattccaggatggtccctg 2061
|| ||||| || || || |||||||| | ||| ||||| |||||||| || || ||||||
Sbjct: 396 tccgtatcgagccccccgctgtgacctaagaacacctggatcattcctgggtgatccctg 337
Query: 2062 gtattgtttcctggccatggtgtgccatcttgcatgatccatccttcctcagggactttt 2121
| ||| ||||| |||||||| || ||||| ||||| |||| ||||| || || | ||
Sbjct: 336 ggattatttccaggccatggagttccatcctgcattgtccaaccttcttctggcatcttc 277
Query: 2122 tgtgccttagcaacaaggccatttaccctaattttgaattcttcatattctctcttcatg 2181
|| || || |||||||| |||| | || | ||||||||||||||||||||||||||
Sbjct: 276 tgagctttggcaacaagagcattgatccgcaccttgaattcttcatattctctcttcatt 217
Query: 2182 gcccggcggtctttaacaaatgaagggtgcactttgtccttcaagtaatcaattttctgg 2241
|| ||||| ||||| ||||| ||||| || | |||||||||| |||||||| || |||
Sbjct: 216 gctcggcgctctttcacaaaagaaggctgtatcttgtccttcagataatcaatcttttgg 157
Query: 2242 gagaagtaccattcaggagctctaggttcaatgttgtacttcttaacaaatggcacccat 2301
| || || | ||||| || ||||| ||||| |||| |||||| || ||||||||
Sbjct: 156 gcaaaataaaactcaggggccctaggctcaatattgtgcttcttgcagaaaggcacccac 97
Query: 2302 tttctagcaaactctgaagtctcagctagtgcatcaaatgtcagcatagcagctccatca 2361
|| || |||||||| | ||| |||| || || ||||| |||| |||||| | ||||||
Sbjct: 96 ttccttgcaaactccgcagtttcagaaagggcttcaaacgtcaacatagctgaaccatca 37
Query: 2362 tcagatacatagca 2375
|| || ||||||||
Sbjct: 36 tctgaaacatagca 23
>gb|CV244615.1|CV244615 WS0255.B21_C09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0255_C09
3', mRNA sequence
Length = 402
Score = 145 bits (73), Expect = 1e-032
Identities = 190/229 (82%)
Strand = Plus / Minus
Query: 1634 tgaaaacacagccagtgcccacataaactggtccttggatgccatcaagacctctcaagt 1693
|||||||||| ||||| || ||||| | |||||||| |||||||| | |||||||| |
Sbjct: 237 tgaaaacacatccagtcccgacatatataggtccttgaatgccatccaaacctctcatat 178
Query: 1694 taatatcgaaaaacacggtgttcctgttggcatatcgatcattcctatcaataccatcga 1753
| ||||| || || || ||||||| |||||||||||||||| |||| ||||| ||||| |
Sbjct: 177 tgatatcaaagaatacagtgttccggttggcatatcgatcactcctgtcaatgccatcaa 118
Query: 1754 acctctggggaaactgaacatagcagacactccttcctaggttaggatccataaggaagc 1813
||||||| || ||||| |||||||| || ||| |||| || |||||||| | ||| |
Sbjct: 117 acctctgtgggaactggacatagcacactctctttccaagtaatggatccatcatgaaac 58
Query: 1814 acatagcttccctgagagccttactgttgttgatgtagtgatcacaatc 1862
|||| ||||| || |||||||||||||| ||||||||||||||||||||
Sbjct: 57 acattgcttctctaagagccttactgttattgatgtagtgatcacaatc 9
>gb|DT489371.1|DT489371 WS02542.B21_A18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02542_A18 3', mRNA sequence
Length = 402
Score = 145 bits (73), Expect = 1e-032
Identities = 190/229 (82%)
Strand = Plus / Minus
Query: 1634 tgaaaacacagccagtgcccacataaactggtccttggatgccatcaagacctctcaagt 1693
|||||||||| ||||| || ||||| | |||||||| |||||||| | |||||||| |
Sbjct: 237 tgaaaacacatccagtcccgacatatataggtccttgaatgccatccaaacctctcatat 178
Query: 1694 taatatcgaaaaacacggtgttcctgttggcatatcgatcattcctatcaataccatcga 1753
| ||||| || || || ||||||| |||||||||||||||| |||| ||||| ||||| |
Sbjct: 177 tgatatcaaagaatacagtgttccggttggcatatcgatcactcctgtcaatgccatcaa 118
Query: 1754 acctctggggaaactgaacatagcagacactccttcctaggttaggatccataaggaagc 1813
||||||| || ||||| |||||||| || ||| |||| || |||||||| | ||| |
Sbjct: 117 acctctgtgggaactggacatagcacactctctttccaagtaatggatccatcatgaaac 58
Query: 1814 acatagcttccctgagagccttactgttgttgatgtagtgatcacaatc 1862
|||| ||||| || |||||||||||||| ||||||||||||||||||||
Sbjct: 57 acattgcttctctaagagccttactgttattgatgtagtgatcacaatc 9
>gb|AJ778214.1|AJ778214 AJ778214 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400040H10F1, mRNA sequence
Length = 612
Score = 129 bits (65), Expect = 9e-028
Identities = 323/409 (78%)
Strand = Plus / Minus
Query: 1826 tgagagccttactgttgttgatgtagtgatcacaatcaagattcaacatgtattgtccat 1885
||||||| |||||||| |||| ||||||||||||||| | ||||| | || ||||
Sbjct: 578 tgagagctttactgttattgaagtagtgatcacaatcgacattcagaagataagcaccat 519
Query: 1886 tggtaagcacagctgagacgcggacaagagcattcatggcaccagctttcttgtgatgct 1945
|||| || |||||||| || || | | |||||||| || || ||||||||||||||||
Sbjct: 518 tggtcagtacagctgaaactcgaatcaacgcattcattgctccggctttcttgtgatgct 459
Query: 1946 ggaatccaggacgtttttcacgagaaacatagaccaaacggggtagctcattaccctcag 2005
|||||||||| | |||||||| |||||||| || | || ||||||||||| || || |
Sbjct: 458 ggaatccaggtctcttttcacgggaaacatatacaagtcgaggtagctcatttccatccg 399
Query: 2006 tatcaagaccaccactgtgaccaaggaaaacctgaatcattccaggatggtccctggtat 2065
| ||||| || ||||||||||| | || ||||| |||||||| || || ||||| | ||
Sbjct: 398 tgtcaagccccccactgtgacccaaaaacacctggatcattcctgggtgatcccttggat 339
Query: 2066 tgtttcctggccatggtgtgccatcttgcatgatccatccttcctcagggactttttgtg 2125
| ||||| |||||||| || ||||| ||||| |||| ||||| ||||| | || || |
Sbjct: 338 tatttccaggccatggagttccatcctgcatcgtccaaccttcttcaggcatcttctgag 279
Query: 2126 ccttagcaacaaggccatttaccctaattttgaattcttcatattctctcttcatggccc 2185
| || |||||||| |||| | | | |||||||||||||||||||||||||| || |
Sbjct: 278 ctttggcaacaagagcattgattcgcaccttgaattcttcatattctctcttcattgctc 219
Query: 2186 ggcggtctttaacaaatgaagggtgcactttgtccttcaagtaatcaat 2234
|||| ||||| ||||| ||||| || | |||||||||| ||||||||
Sbjct: 218 ggcgctctttgacaaaagaaggctgtatcttgtccttcagataatcaat 170
>gb|CA934196.1|CA934196 MTU3TS.P4.D08 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 482
Score = 125 bits (63), Expect = 1e-026
Identities = 222/275 (80%)
Strand = Plus / Plus
Query: 436 cggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatcacccagaag 495
|||||||| |||||||| | ||| |||||||| ||||| || || |||||||||||||||
Sbjct: 207 cggttctggcgacccatcaaacctttgaggaaagggtagagatggacgatcacccagaag 266
Query: 496 gcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgttgatggcgtag 555
|| ||||| |||||||| || || || ||||||||||| || || ||||||||||| | |
Sbjct: 267 gcaaagaaaagcttgccaaaaagtgggccccacgactgataaccactgttgatggcatgg 326
Query: 556 gagatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgggcgggatcaga 615
|| || ||||||||||| || |||| ||| | ||| |||| || || |||||||| ||
Sbjct: 327 gatatcccggcaacaacacccaccaagttaacgatgaggagagttgttggcgggataagt 386
Query: 616 agtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcatccgaggccttg 675
|| || ||||| ||||||| ||| | || || | || ||||| || || || ||||||
Sbjct: 387 agagttgtccatttgaacaagtataattcagcagaatcaccgtcctcgtctgatgccttg 446
Query: 676 gaggtgacggtgaagttggtgtcgatgccggcaag 710
|| || || |||||||||||||||||||| |||||
Sbjct: 447 gacgtaacagtgaagttggtgtcgatgccagcaag 481
>gb|AJ778476.1|AJ778476 AJ778476 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000600001D07F1, mRNA sequence
Length = 677
Score = 121 bits (61), Expect = 2e-025
Identities = 178/217 (82%)
Strand = Plus / Minus
Query: 1093 acctggttcagacggtctgagagattgatgggagccgatcccttgaaggccggccgctta 1152
|||||||||| ||| || || |||||||| ||||| || ||||| || || || || |
Sbjct: 229 acctggttcaaacgatcagaaagattgataggagcagagcccttaaatgcagggcgagga 170
Query: 1153 ggcatgcagtagatcgaccgccagcctcgtgcgtgcatcttgaacccagtgagaatatct 1212
|||||||| ||||| || ||| || || || ||||||||||||||||| | |||||||
Sbjct: 169 ggcatgcaatagattgatatccaaccacgagcatgcatcttgaacccagtcaaaatatct 110
Query: 1213 tccgtcacagaaccatagatccacccaatctcagttccccattcaatcttgtcctcgtag 1272
|| || ||||||||||||||||| |||||||| | ||||||||| ||||||| || ||
Sbjct: 109 tctgtaacagaaccatagatccatccaatctctttgccccattcagtcttgtcttcatat 50
Query: 1273 ccacaacttatgacatggatagcttctttcagaagag 1309
||||| || || ||||||||||||||||||| |||||
Sbjct: 49 ccacagctaataacatggatagcttctttcaaaagag 13
>gb|AY573573.2| Populus tremula x Populus tremuloides cellulose synthase (CesA3-1)
mRNA, complete cds
Length = 3250
Score = 121 bits (61), Expect = 2e-025
Identities = 145/173 (83%)
Strand = Plus / Minus
Query: 2335 tcaaatgtcagcatagcagctccatcatcagatacatagcaagagaccttatccacagga 2394
|||||||| ||||||||||| ||||||||||| |||||||| || || |||||||| |||
Sbjct: 951 tcaaatgtaagcatagcagcaccatcatcagacacatagcaggaaactttatccacggga 892
Query: 2395 tagtccacagcgagaatggatagcacggtattggcagtgacaagaggaggctccttcatt 2454
||||||||||| || ||||| || || ||||||||||||| | |||||||| |||| |
Sbjct: 891 tagtccacagcaaggatggaaaggactgtattggcagtgatcaatggaggctctttcagt 832
Query: 2455 gggtcgacagtactgacaaaaatgtcaacagcagccaactgagatggctcacc 2507
|| || |||||||| || |||| || |||||||| | |||||| ||||||||
Sbjct: 831 ggatcaacagtactcacgaaaaaatccacagcagcaagctgagaaggctcacc 779
Score = 67.9 bits (34), Expect = 3e-009
Identities = 118/146 (80%)
Strand = Plus / Minus
Query: 1633 ttgaaaacacagccagtgcccacataaactggtccttggatgccatcaagacctctcaag 1692
||||||||||| ||||| |||||||| | ||||||||| |||||||| | ||| ||| |
Sbjct: 1653 ttgaaaacacaaccagttcccacatacattggtccttgaatgccatccaatcctttcatg 1594
Query: 1693 ttaatatcgaaaaacacggtgttcctgttggcatatcgatcattcctatcaataccatcg 1752
|||| ||| || || || |||| | ||||| || |||||| ||||||| || |||||
Sbjct: 1593 ttaacatcaaagaaaactatgttacgattggcgtagcgatcactcctatctatgccatca 1534
Query: 1753 aacctctggggaaactgaacatagca 1778
|||||||| || ||||| ||||||||
Sbjct: 1533 aacctctgagggaactgcacatagca 1508
Score = 63.9 bits (32), Expect = 4e-008
Identities = 176/224 (78%)
Strand = Plus / Minus
Query: 2026 ccaaggaaaacctgaatcattccaggatggtccctggtattgtttcctggccatggtgtg 2085
|||||||| ||||||||||| ||||| || || | || || ||||||||||| |||||
Sbjct: 1260 ccaaggaatacctgaatcatgccagggtgatcacgtgtgttatttcctggccaaggtgtt 1201
Query: 2086 ccatcttgcatgatccatccttcctcagggactttttgtgccttagcaacaaggccattt 2145
|| |||||||| ||||||| || ||||| ||| |||||||| | || ||| ||||
Sbjct: 1200 ccgtcttgcatagtccatccctcgtcaggtgttttctgtgcctttggtaccagggcatta 1141
Query: 2146 accctaattttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaa 2205
|| | | |||| | |||||||| || || ||||| || | ||| ||||| || || |||
Sbjct: 1140 actcggactttgtactcttcatagtcccttttcatcgctctgcgttctttcacgaaagaa 1081
Query: 2206 gggtgcactttgtccttcaagtaatcaattttctgggagaagta 2249
|| || || || || |||||||||||||||||||| ||||||||
Sbjct: 1080 ggctgaaccttatctttcaagtaatcaattttctgtgagaagta 1037
Score = 56.0 bits (28), Expect = 1e-005
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 436 cggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatcacccagaag 495
||||| || |||||||| ||||| || ||||| || || || |||| ||||||||||||
Sbjct: 2847 cggttttggcgacccatcagacctttaaggaatggatagagatgaagaatcacccagaag 2788
Query: 496 gcgaagaagagcttgccgaagagcggacccca 527
|| ||||||| |||||| ||||| || |||||
Sbjct: 2787 gcaaagaagaccttgccaaagagaggtcccca 2756
Score = 56.0 bits (28), Expect = 1e-005
Identities = 184/236 (77%)
Strand = Plus / Minus
Query: 1063 atttccactgaaccgagagcccaccggagcacctggttcagacggtctgagagattgatg 1122
|||||||| || || |||||||||||||| ||||||| || | || || |||||||||
Sbjct: 2220 atttccacagatccaagagcccaccggagaacctggtgcaatctatcagacagattgatg 2161
Query: 1123 ggagccgatcccttgaaggccggccgcttaggcatgcagtagatcgaccgccagcctcgt 1182
|| || ||||| ||||| || |||| ||||||||||| || || | ||| |||||
Sbjct: 2160 ggtgcagatcctttgaatgctggccttacgggcatgcagtatattgatctccatcctcgg 2101
Query: 1183 gcgtgcatcttgaacccagtgagaatatcttccgtcacagaaccatagatccacccaatc 1242
|||||||||||| ||| | | ||||| || || || || ||||| ||||| ||||||
Sbjct: 2100 cagtgcatcttgaatccacttaagatatcctcagtgaccgacccataaatccaaccaatc 2041
Query: 1243 tcagttccccattcaatcttgtcctcgtagccacaacttatgacatggatagcttc 1298
|| ||||||||||| |||| || || ||||||| | |||||||| ||||||||
Sbjct: 2040 tcttttccccattcagtcttctcttcaaagccacagccgatgacatgaatagcttc 1985
Score = 56.0 bits (28), Expect = 1e-005
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 2565 ccactttggaaactgatccaatatccaggaaagagcaaaccagatctcacatataacaga 2624
|||||| ||||| |||||||| | ||| |||| |||||||||||||||||||| |||||
Sbjct: 721 ccacttgggaaattgatccaacacccaagaaaacgcaaaccagatctcacatatgacaga 662
Score = 50.1 bits (25), Expect = 6e-004
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 724 ccctggaagacggcgaagaggtgggcggagatgcctccgatgacccagaactg 776
|||||||||||||| ||||| ||||| || | |||||||| |||||||||||
Sbjct: 2562 ccctggaagacggcaaagagatgggctgaaacacctccgatcacccagaactg 2510
Score = 42.1 bits (21), Expect = 0.15
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 610 atcagaagtgtcgtccacttgaacatgtacagctccgcgaa 650
||||||||||| |||||||||| ||| || |||||| ||||
Sbjct: 2673 atcagaagtgttgtccacttgaccatatagagctccccgaa 2633
>gb|CN520281.1|CN520281 GQ0105.B3_A14 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0105_A14 5', mRNA sequence
Length = 783
Score = 119 bits (60), Expect = 8e-025
Identities = 278/348 (79%), Gaps = 2/348 (0%)
Strand = Plus / Minus
Query: 1630 ctgttgaaaacacagccagtgcccacataaactggtccttggatgccatcaagacctctc 1689
|||||||| ||||| ||||| || ||||| ||||| ||||| | ||||| |||||| ||
Sbjct: 611 ctgttgaagacacatccagtaccaacatatactggcccttgaaccccatctagacctttc 552
Query: 1690 aagttaatatcgaaaaacacggtgttcctgttggcatatcgatcattcctatcaatacca 1749
| ||| ||||| || ||||| || | || ||||||| ||||| | ||||||||||
Sbjct: 551 atgtttatatcaaagaacacaacattgcgattagcatatctatcatggcgatcaatacca 492
Query: 1750 tcgaacctctggggaaactgaacatagcagacactccttcctaggttagg-atccataag 1808
|| |||||||| |||||||| |||||||||| || ||||| | ||| || |||||| |
Sbjct: 491 tcaaacctctgcggaaactggacatagcagag-cttcttcccaagttggggatccatcaa 433
Query: 1809 gaagcacatagcttccctgagagccttactgttgttgatgtagtgatcacaatcaagatt 1868
|||||||| ||||| || | |||||| ||||| |||||||| || |||||||| | |||
Sbjct: 432 aaagcacatggcttctcttacagccttgctgttattgatgtaatggtcacaatccaaatt 373
Query: 1869 caacatgtattgtccattggtaagcacagctgagacgcggacaagagcattcatggcacc 1928
|||||| | || ||||||| ||||| |||||||| || | |||||||||||||||||
Sbjct: 372 caacataaaaggtgcattggtgagcactgctgagactcgaatcagagcattcatggcacc 313
Query: 1929 agctttcttgtgatgctggaatccaggacgtttttcacgagaaacata 1976
||||||||||| || | ||||||| ||||| ||||| ||||||||
Sbjct: 312 tgctttcttgtggtggttatatccaggtcgtttctcacgggaaacata 265
>gb|DT493580.1|DT493580 WS0111.BR_M17 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0111_M17
5', mRNA sequence
Length = 514
Score = 119 bits (60), Expect = 8e-025
Identities = 102/116 (87%)
Strand = Plus / Minus
Query: 436 cggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatcacccagaag 495
|||||||| |||||||| | ||| |||||||| ||||| || || |||||||||||||||
Sbjct: 117 cggttctggcgacccatcaaacctttgaggaaagggtagagatggacgatcacccagaag 58
Query: 496 gcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgttgatggc 551
|| ||||| |||||||| ||||| ||||||||||||||||| || |||||||||||
Sbjct: 57 gcaaagaaaagcttgccaaagagtggaccccacgactggtaaccactgttgatggc 2
>gb|AF081534.1|AF081534 Populus x canescens cellulose synthase (cel1) mRNA, complete cds
Length = 3395
Score = 119 bits (60), Expect = 8e-025
Identities = 278/348 (79%), Gaps = 2/348 (0%)
Strand = Plus / Minus
Query: 1630 ctgttgaaaacacagccagtgcccacataaactggtccttggatgccatcaagacctctc 1689
|||||||| ||||| ||||| || ||||| ||||| ||||| | ||||| |||||| ||
Sbjct: 1780 ctgttgaagacacatccagtaccaacatatactggcccttgaaccccatctagacctttc 1721
Query: 1690 aagttaatatcgaaaaacacggtgttcctgttggcatatcgatcattcctatcaatacca 1749
| ||| ||||| || ||||| ||| | || ||||||| ||||| | ||| ||||||
Sbjct: 1720 atgtttatatcaaagaacacaacgttgcgattagcatatctatcatggcgatcgatacca 1661
Query: 1750 tcgaacctctggggaaactgaacatagcagacactccttcctaggttagg-atccataag 1808
|| |||||||| |||||||| |||||||||| || ||||| | ||| || |||||| |
Sbjct: 1660 tcaaacctctgcggaaactggacatagcagag-cttcttcccaagttggggatccatcaa 1602
Query: 1809 gaagcacatagcttccctgagagccttactgttgttgatgtagtgatcacaatcaagatt 1868
|||||||| ||||| || | |||||| ||||| |||||||| || |||||||| | |||
Sbjct: 1601 aaagcacatggcttctcttacagccttgctgttattgatgtaatggtcacaatccaaatt 1542
Query: 1869 caacatgtattgtccattggtaagcacagctgagacgcggacaagagcattcatggcacc 1928
|||||| | || ||||||| ||||| ||||||||| | | |||||||||||||||||
Sbjct: 1541 caacataaaaggtgcattggtgagcactgctgagacgagaatcagagcattcatggcacc 1482
Query: 1929 agctttcttgtgatgctggaatccaggacgtttttcacgagaaacata 1976
||||||||||| || | ||||||| ||||| ||||| ||||||||
Sbjct: 1481 tgctttcttgtggtggttatatccaggtcgtttctcacgggaaacata 1434
Score = 83.8 bits (42), Expect = 5e-014
Identities = 132/162 (81%)
Strand = Plus / Minus
Query: 2154 tttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaagggtgcac 2213
||||||||||||||||||||| ||||| || | ||| || || ||||| || |||||
Sbjct: 1256 tttgaattcttcatattctcttttcatagctctgcgctccttcacaaagttgggatgcac 1197
Query: 2214 tttgtccttcaagtaatcaattttctgggagaagtaccattcaggagctctaggttcaat 2273
|||||| |||||||| ||||| ||||| | |||||| | |||||||| || || |||||
Sbjct: 1196 tttgtctttcaagtagtcaatcttctgagtgaagtagaactcaggagcccttggctcaat 1137
Query: 2274 gttgtacttcttaacaaatggcacccattttctagcaaactc 2315
||| | |||||| |||||| ||||| ||||||||||||||
Sbjct: 1136 gttatgcttcttgcaaaatggaacccactttctagcaaactc 1095
Score = 52.0 bits (26), Expect = 2e-004
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 2035 acctgaatcattccaggatggtccctggtattgtttcctggccatggtgtgccatcttgc 2094
|||||||||||||||||||| || | || ||||||| |||||||| || ||||| |||
Sbjct: 1375 acctgaatcattccaggatgatcacgtgtgatgtttccaggccatggggtaccatcctgc 1316
Query: 2095 atgatccatccttc 2108
|| | |||||||||
Sbjct: 1315 atcacccatccttc 1302
Score = 46.1 bits (23), Expect = 0.010
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 1186 tgcatcttgaacccagtgagaatatcttccgtcacagaaccatagatccacccaa 1240
||||||||||| || || || |||||||| || ||||||||||| ||||| ||||
Sbjct: 2278 tgcatcttgaagcctgtcaggatatcttctgtaacagaaccataaatccatccaa 2224
>gb|AF527387.1| Populus tremuloides xylem-specific cellulose synthase (CesA3) mRNA,
complete cds
Length = 3401
Score = 119 bits (60), Expect = 8e-025
Identities = 278/348 (79%), Gaps = 2/348 (0%)
Strand = Plus / Minus
Query: 1630 ctgttgaaaacacagccagtgcccacataaactggtccttggatgccatcaagacctctc 1689
|||||||| ||||| ||||| || ||||| ||||| ||||| | ||||| |||||| ||
Sbjct: 1792 ctgttgaagacacatccagtaccaacatatactggcccttgaaccccatctagacctttc 1733
Query: 1690 aagttaatatcgaaaaacacggtgttcctgttggcatatcgatcattcctatcaatacca 1749
| ||| ||||| || ||||| ||| | || ||||||| ||||| | ||| ||||||
Sbjct: 1732 atgtttatatcaaagaacacaacgttgcgattagcatatctatcatggcgatcgatacca 1673
Query: 1750 tcgaacctctggggaaactgaacatagcagacactccttcctaggttagg-atccataag 1808
|| |||||||| |||||||| |||||||||| || ||||| | ||| || |||||| |
Sbjct: 1672 tcaaacctctgcggaaactggacatagcagag-cttcttcccaagttggggatccatcaa 1614
Query: 1809 gaagcacatagcttccctgagagccttactgttgttgatgtagtgatcacaatcaagatt 1868
|||||||| ||||| || | |||||| ||||| |||||||| || |||||||| | |||
Sbjct: 1613 aaagcacatggcttctcttacagccttgctgttattgatgtaatggtcacaatccaaatt 1554
Query: 1869 caacatgtattgtccattggtaagcacagctgagacgcggacaagagcattcatggcacc 1928
|||||| | || ||||||| ||||| |||||||| || | |||||||||||||||||
Sbjct: 1553 caacataaaaggtgcattggtgagcactgctgagactcgaatcagagcattcatggcacc 1494
Query: 1929 agctttcttgtgatgctggaatccaggacgtttttcacgagaaacata 1976
||||||||||| || | ||||||| ||||| ||||| ||||||||
Sbjct: 1493 tgctttcttgtggtggttatatccaggtcgtttctcacgggaaacata 1446
Score = 75.8 bits (38), Expect = 1e-011
Identities = 131/162 (80%)
Strand = Plus / Minus
Query: 2154 tttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaagggtgcac 2213
||||||||||||||||||||| ||||| || | ||| || || ||||| || |||||
Sbjct: 1268 tttgaattcttcatattctcttttcatagctctgcgctccttcacaaagttgggatgcac 1209
Query: 2214 tttgtccttcaagtaatcaattttctgggagaagtaccattcaggagctctaggttcaat 2273
|||||| |||||||| ||||| ||||| | |||||| | |||||||| || || |||||
Sbjct: 1208 tttgtctttcaagtagtcaatcttctgagtgaagtagaactcaggagcccttggctcaat 1149
Query: 2274 gttgtacttcttaacaaatggcacccattttctagcaaactc 2315
||| | |||||| |||||| ||||| |||||||||||||
Sbjct: 1148 gttatgcttcttgcaaaatggaacccaccttctagcaaactc 1107
Score = 60.0 bits (30), Expect = 7e-007
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 2035 acctgaatcattccaggatggtccctggtattgtttcctggccatggtgtgccatcttgc 2094
|||||||||||||||||||| || | ||| ||||||| |||||||| || ||||| |||
Sbjct: 1387 acctgaatcattccaggatgatcacgggtgatgtttccaggccatggggtaccatcctgc 1328
Query: 2095 atgatccatccttc 2108
|| | |||||||||
Sbjct: 1327 atcacccatccttc 1314
Score = 50.1 bits (25), Expect = 6e-004
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 685 gtgaagttggtgtcgatgccggcaagcaccttgaggaggccctggaagacggc 737
|||||||| ||||| | || ||||| |||||||||||||| |||||||||||
Sbjct: 2791 gtgaagttagtgtcaactcctgcaaggaccttgaggaggccttggaagacggc 2739
Score = 46.1 bits (23), Expect = 0.010
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 1186 tgcatcttgaacccagtgagaatatcttccgtcacagaaccatagatccacccaa 1240
||||||||||| || || || |||||||| || ||||||||||| ||||| ||||
Sbjct: 2290 tgcatcttgaagcctgtcaggatatcttctgtaacagaaccataaatccatccaa 2236
>gb|AY573571.1| Populus tremula x Populus tremuloides cellulose synthase (CesA1)
mRNA, complete cds
Length = 3472
Score = 119 bits (60), Expect = 8e-025
Identities = 278/348 (79%), Gaps = 2/348 (0%)
Strand = Plus / Minus
Query: 1630 ctgttgaaaacacagccagtgcccacataaactggtccttggatgccatcaagacctctc 1689
|||||||| ||||| ||||| || ||||| ||||| ||||| | ||||| |||||| ||
Sbjct: 1864 ctgttgaagacacatccagtaccaacatatactggcccttgaaccccatctagacctttc 1805
Query: 1690 aagttaatatcgaaaaacacggtgttcctgttggcatatcgatcattcctatcaatacca 1749
| ||| ||||| || ||||| ||| | || ||||||| ||||| | ||| ||||||
Sbjct: 1804 atgtttatatcaaagaacacaacgttgcgattagcatatctatcatggcgatcgatacca 1745
Query: 1750 tcgaacctctggggaaactgaacatagcagacactccttcctaggttagg-atccataag 1808
|| |||||||| |||||||| |||||||||| || ||||| | ||| || |||||| |
Sbjct: 1744 tcaaacctctgcggaaactggacatagcagag-cttcttcccaagttggggatccatcaa 1686
Query: 1809 gaagcacatagcttccctgagagccttactgttgttgatgtagtgatcacaatcaagatt 1868
|||||||| ||||| || | |||||| ||||| |||||||| || |||||||| | |||
Sbjct: 1685 aaagcacatggcttctcttacagccttgctgttattgatgtaatggtcacaatccaaatt 1626
Query: 1869 caacatgtattgtccattggtaagcacagctgagacgcggacaagagcattcatggcacc 1928
|||||| | || ||||||| ||||| |||||||| || | |||||||||||||||||
Sbjct: 1625 caacataaaaggtgcattggtgagcactgctgagactcgaatcagagcattcatggcacc 1566
Query: 1929 agctttcttgtgatgctggaatccaggacgtttttcacgagaaacata 1976
||||||||||| || | ||||||| ||||| ||||| ||||||||
Sbjct: 1565 tgctttcttgtggtggttatatccaggtcgtttctcacgggaaacata 1518
Score = 75.8 bits (38), Expect = 1e-011
Identities = 131/162 (80%)
Strand = Plus / Minus
Query: 2154 tttgaattcttcatattctctcttcatggcccggcggtctttaacaaatgaagggtgcac 2213
||||||||||||||||||||| ||||| || | ||| || || ||||| || |||||
Sbjct: 1340 tttgaattcttcatattctcttttcatagctctgcgctccttcacaaagttgggatgcac 1281
Query: 2214 tttgtccttcaagtaatcaattttctgggagaagtaccattcaggagctctaggttcaat 2273
|||||| |||||||| ||||| ||||| | |||||| | |||||||| || || |||||
Sbjct: 1280 tttgtctttcaagtagtcaatcttctgagtgaagtagaactcaggagcccttggctcaat 1221
Query: 2274 gttgtacttcttaacaaatggcacccattttctagcaaactc 2315
||| | |||||| |||||| ||||| |||||||||||||
Sbjct: 1220 gttatgcttcttgcaaaatggaacccaccttctagcaaactc 1179
Score = 52.0 bits (26), Expect = 2e-004
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 2035 acctgaatcattccaggatggtccctggtattgtttcctggccatggtgtgccatcttgc 2094
|||||||||||||||||||| || | || ||||||| |||||||| || ||||| |||
Sbjct: 1459 acctgaatcattccaggatgatcacgtgtgatgtttccaggccatggggtaccatcctgc 1400
Query: 2095 atgatccatccttc 2108
|| | |||||||||
Sbjct: 1399 atcacccatccttc 1386
Score = 46.1 bits (23), Expect = 0.010
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 1186 tgcatcttgaacccagtgagaatatcttccgtcacagaaccatagatccacccaa 1240
||||||||||| || || || |||||||| || ||||||||||| ||||| ||||
Sbjct: 2362 tgcatcttgaagcctgtcaggatatcttctgtaacagaaccataaatccatccaa 2308
>gb|CF229283.1|CF229283 PtaXM0023E4E0410 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 642
Score = 109 bits (55), Expect = 8e-022
Identities = 274/347 (78%), Gaps = 1/347 (0%)
Strand = Plus / Minus
Query: 488 cccagaaggcgaagaagagcttgccgaagagcggaccccacgactggta-cccgctgttg 546
||||||| | |||||| |||||||| ||||| |||||||| || || || ||| ||||||
Sbjct: 642 cccagaaagngaagaaaagcttgccaaagagtggaccccatgantgataacccactgttg 583
Query: 547 atggcgtaggagatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgggc 606
|| || | ||| || ||||||||||| || |||| ||| | ||| |||| || || |||
Sbjct: 582 attgcatgggatatcccggcaacaacacccaccaagttaangatgaggagagttgttggc 523
Query: 607 gggatcagaagtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtcttcatcc 666
||||| || || || ||||| ||||||| ||| | || || | || | ||| || ||
Sbjct: 522 gggataagtagagttgtccatttgaacaagtataattcagcagaatcacngtcctcgtct 463
Query: 667 gaggccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttgaggaggccc 726
|| |||||||| || || |||||||||||||||||||| ||||| || ||||| | |||
Sbjct: 462 gatgccttggacgtaacagtgaagttggtgtcgatgccagcaagtactttgagcaagcct 403
Query: 727 tggaagacggcgaagaggtgggcggagatgcctccgatgacccagaactgctcgttcctc 786
||||| || || || || ||||| || | || ||||||||||| ||||| || ||||||
Sbjct: 402 tggaaaacagcaaaaagatgggctgaaacaccaccgatgacccaaaactgttcattcctc 343
Query: 787 caccactcgtcgatgcccacgccgctccacctcatctccaggatacc 833
|||||||| || || || || || |||||||||||||||| ||||||
Sbjct: 342 caccactcatcaatcccaacaccactccacctcatctccaagatacc 296
Score = 56.0 bits (28), Expect = 1e-005
Identities = 70/84 (83%)
Strand = Plus / Minus
Query: 1045 caatgccggctgaaaaggatttccactgaaccgagagcccaccggagcacctggttcaga 1104
|||||||| |||| ||| ||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 84 caatgccgactgagaagaatttcaacagaacccagagcccatcgaagcacttggttcaga 25
Query: 1105 cggtctgagagattgatgggagcc 1128
|| || || ||||| || ||||||
Sbjct: 24 cgatcagaaagattaataggagcc 1
>gb|CN518195.1|CN518195 GQ0092.B3_P04 GQ009 Populus trichocarpa x Populus deltoides cDNA
clone GQ0092_P04 5', mRNA sequence
Length = 491
Score = 109 bits (55), Expect = 8e-022
Identities = 184/227 (81%)
Strand = Plus / Minus
Query: 1260 cttgtcctcgtagccacaacttatgacatggatagcttctttcagaagagattccggagt 1319
|||||| || || ||||| || |||||||| ||||||||||| |||||||| || || ||
Sbjct: 423 cttgtcttcatatccacagctgatgacatgaatagcttctttgagaagagactctggggt 364
Query: 1320 cgcagactgaggaacaccaccatattccatcagagtggacgcaacaaaagctgcagattg 1379
|| |||| ||||||||||| | ||||| || ||||| |||||||| | | |||||
Sbjct: 363 ggcggactccggaacaccaccgttctccataagggtggaagcaacaaacacggttgattg 304
Query: 1380 gccaaatctcttctccaagctcatttgagacataagaagtgatttctcatcatcaaatcc 1439
||||||||| ||||| | ||||||||||||| || | |||||| |||||||| |||||
Sbjct: 303 gccaaatcttttctcaagtgtcatttgagacatgagcaatgatttttcatcatcgaatcc 244
Query: 1440 agcgccttcaactccctcctctatatcttcaagattgaatactggca 1486
|| |||||||| || || ||||||||||| | ||||||||| ||||
Sbjct: 243 agtaccttcaaccccttcttctatatcttctaaattgaataccggca 197
>gb|AY162180.1| Populus tremuloides cellulose synthase (CesA7) mRNA, complete cds
Length = 3809
Score = 109 bits (55), Expect = 8e-022
Identities = 139/167 (83%)
Strand = Plus / Minus
Query: 2017 ccactgtgaccaaggaaaacctgaatcattccaggatggtccctggtattgtttcctggc 2076
||||| ||||||||||||||||||||||| ||||||||||| | ||||||||| |||
Sbjct: 1738 ccactttgaccaaggaaaacctgaatcatgccaggatggtctcgtacattgtttccaggc 1679
Query: 2077 catggtgtgccatcttgcatgatccatccttcctcagggactttttgtgccttagcaaca 2136
||||| || ||||||||||| |||| || || || || || |||||||| | | |||
Sbjct: 1678 catggagttccatcttgcattgtccaaccatcttccggaaccttttgtgctgtggaaacc 1619
Query: 2137 aggccatttaccctaattttgaattcttcatattctctcttcatggc 2183
| ||||||| ||| | ||||||||||||||||||||||||||||||
Sbjct: 1618 aacccatttatcctcactttgaattcttcatattctctcttcatggc 1572
Score = 63.9 bits (32), Expect = 4e-008
Identities = 77/92 (83%)
Strand = Plus / Minus
Query: 1072 gaaccgagagcccaccggagcacctggttcagacggtctgagagattgatgggagccgat 1131
|||||||| |||||||| || ||||||| ||||| ||||| || || || ||||| ||
Sbjct: 2692 gaaccgagggcccaccgaagaacctggtgtagacgatctgacaggttaattggagctgac 2633
Query: 1132 cccttgaaggccggccgcttaggcatgcagta 1163
|||||||| || ||||||||||| ||||||||
Sbjct: 2632 cccttgaatgcaggccgcttaggtatgcagta 2601
Score = 48.1 bits (24), Expect = 0.002
Identities = 147/188 (78%)
Strand = Plus / Minus
Query: 2289 aaatggcacccattttctagcaaactctgaagtctcagctagtgcatcaaatgtcagcat 2348
|||||| ||||| || |||||||| || || ||||| | || || |||||||| |||||
Sbjct: 1466 aaatggaacccacttcctagcaaattcagacgtctcggagagagcttcaaatgtaagcat 1407
Query: 2349 agcagctccatcatcagatacatagcaagagaccttatccacaggatagtccacagcgag 2408
|| || ||||| || || |||||||| | || |||||||||||||| || || |||||
Sbjct: 1406 ggcggcaccatcgtctgacacatagcatgcaactttatccacaggataatcaaccgcgag 1347
Query: 2409 aatggatagcacggtattggcagtgacaagaggaggctccttcattgggtcgacagtact 2468
||| || || || || || ||||||| || ||||| || ||||| || || || |||||
Sbjct: 1346 aatagagagaacagtgttcgcagtgatcagcggaggttctttcataggatcaactgtact 1287
Query: 2469 gacaaaaa 2476
|||||||
Sbjct: 1286 tacaaaaa 1279
>gb|CN522480.1|CN522480 GQ0123.B3_H17 GQ012 Populus trichocarpa x Populus deltoides cDNA
clone GQ0123_H17 5', mRNA sequence
Length = 411
Score = 105 bits (53), Expect = 1e-020
Identities = 117/139 (84%)
Strand = Plus / Minus
Query: 1304 gaagagattccggagtcgcagactgaggaacaccaccatattccatcagagtggacgcaa 1363
|||||| ||| ||||| |||||||||||||||||||||| ||||| || ||||| ||||
Sbjct: 363 gaagagtttctggagttgcagactgaggaacaccaccattctccatgagtgtggaagcaa 304
Query: 1364 caaaagctgcagattggccaaatctcttctccaagctcatttgagacataagaagtgatt 1423
||||| | || || | ||||| |||||||| | |||| | || ||||| |||||||| |
Sbjct: 303 caaaaacagctgactnnccaaacctcttctctaggctcgtctgtgacatgagaagtgact 244
Query: 1424 tctcatcatcaaatccagc 1442
|||||||||||||||||||
Sbjct: 243 tctcatcatcaaatccagc 225
>gb|AY095297.1| Populus tremuloides cellulose synthase (CesA2) mRNA, complete cds
Length = 3277
Score = 105 bits (53), Expect = 1e-020
Identities = 176/217 (81%)
Strand = Plus / Minus
Query: 2017 ccactgtgaccaaggaaaacctgaatcattccaggatggtccctggtattgtttcctggc 2076
||||||||||| || || || |||||||| ||||| || ||||| ||||||||||| |||
Sbjct: 1471 ccactgtgaccgagaaatacttgaatcataccagggtgatccctcgtattgtttccaggc 1412
Query: 2077 catggtgtgccatcttgcatgatccatccttcctcagggactttttgtgccttagcaaca 2136
|||||||| ||||||||||| ||||| || || ||| || || ||||| || || |||
Sbjct: 1411 catggtgttccatcttgcataatccacccctctgtaggaaccttctgtgcttttgctaca 1352
Query: 2137 aggccatttaccctaattttgaattcttcatattctctcttcatggcccggcggtcttta 2196
| |||||| || || |||||||||||||||||||||||||| || || || || |||
Sbjct: 1351 atcgcatttatccgaaccttgaattcttcatattctctcttcatagctcgacgttcctta 1292
Query: 2197 acaaatgaagggtgcactttgtccttcaagtaatcaa 2233
||||| | || || ||||||||||| | ||||||||
Sbjct: 1291 acaaaggttggctgaactttgtccttgaggtaatcaa 1255
Score = 93.7 bits (47), Expect = 5e-017
Identities = 191/239 (79%)
Strand = Plus / Minus
Query: 373 acccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacgatggtcggg 432
||||| |||||||||||||| || ||||| || | | ||| | |||||| || |||||
Sbjct: 3052 acccaaagcaaggagaagatggaagccaggagcactgaccatataaccacaatagtcggt 2993
Query: 433 gtgcggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatcacccag 492
|| | ||| |||| ||||| ||||| |||||||| ||||| || || || |||||||||
Sbjct: 2992 gtcctgttttgcctccccattagacctttgaggaatgggtagagatggacaatcacccag 2933
Query: 493 aaggcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgttgatggcg 552
||||| ||||||||||| ||||| || || ||||| ||||||||||| |||| |||||
Sbjct: 2932 aaggcaaagaagagcttcccgaatagaggtccccatgactggtacccattgtttatggca 2873
Query: 553 taggagatgccggcaacaacgccgaccaggttgatgatcaggatggtggtgggcgggat 611
| |||| || |||||||| || || ||||||||||| | ||| ||||| || |||||
Sbjct: 2872 tctgagactccagcaacaactccaacaaggttgatgattaagatagtggttggagggat 2814
Score = 69.9 bits (35), Expect = 7e-010
Identities = 86/103 (83%)
Strand = Plus / Minus
Query: 1633 ttgaaaacacagccagtgcccacataaactggtccttggatgccatcaagacctctcaag 1692
|||||||| || || ||||||||||| ||||| || || || ||||| ||||| ||| |
Sbjct: 1855 ttgaaaacgcatcctgtgcccacatacactggaccctgaattccatctagacccttcatg 1796
Query: 1693 ttaatatcgaaaaacacggtgttcctgttggcatatcgatcat 1735
||||||||||| || || ||||| |||||||| ||||||||||
Sbjct: 1795 ttaatatcgaagaaaacagtgtttctgttggcgtatcgatcat 1753
Score = 58.0 bits (29), Expect = 3e-006
Identities = 173/221 (78%)
Strand = Plus / Minus
Query: 1078 agagcccaccggagcacctggttcagacggtctgagagattgatgggagccgatcccttg 1137
|||||||| |||||||| ||||| || || ||||| |||||||||||||| || |||||
Sbjct: 2347 agagcccagcggagcacttggtttagccgatctgatagattgatgggagctgaaccctta 2288
Query: 1138 aaggccggccgcttaggcatgcagtagatcgaccgccagcctcgtgcgtgcatcttgaac 1197
|| || | | ||| ||||| ||||| || |||| |||||| || |||||||| ||
Sbjct: 2287 aatgcagctctctttggcatacagtaaatagacctccagccacgacaatgcatcttaaaa 2228
Query: 1198 ccagtgagaatatcttccgtcacagaaccatagatccacccaatctcagttccccattca 1257
|| || |||||||| ||||| | ||||| || ||||| || | ||| ||||||||||
Sbjct: 2227 cctgtcagaatatcctccgtgatcgaaccgtaaatccagcccagctcgagtccccattca 2168
Query: 1258 atcttgtcctcgtagccacaacttatgacatggatagcttc 1298
| ||||| || || |||||||| || |||||||| |||||
Sbjct: 2167 gttttgtcttcatatccacaactgatcacatggatggcttc 2127
>gb|AY573572.1| Populus tremula x Populus tremuloides cellulose synthase (CesA2)
mRNA, complete cds
Length = 3991
Score = 105 bits (53), Expect = 1e-020
Identities = 134/161 (83%)
Strand = Plus / Minus
Query: 2023 tgaccaaggaaaacctgaatcattccaggatggtccctggtattgtttcctggccatggt 2082
||||||||||| |||||||||||||||||||| || ||| ||| || |||||||||||
Sbjct: 2013 tgaccaaggaagacctgaatcattccaggatgatctctgacattattccctggccatgga 1954
Query: 2083 gtgccatcttgcatgatccatccttcctcagggactttttgtgccttagcaacaaggcca 2142
|||||||| ||||| |||| || |||||||| || || |||||| | ||||| | |||
Sbjct: 1953 gtgccatcctgcattgtccaaccatcctcaggaaccttctgtgccgtggcaactaaccca 1894
Query: 2143 tttaccctaattttgaattcttcatattctctcttcatggc 2183
|||| | || |||||| |||||||| ||||||||||||||
Sbjct: 1893 tttattcgaactttgaactcttcatactctctcttcatggc 1853
Score = 75.8 bits (38), Expect = 1e-011
Identities = 98/118 (83%)
Strand = Plus / Minus
Query: 1186 tgcatcttgaacccagtgagaatatcttccgtcacagaaccatagatccacccaatctca 1245
||||||||||| ||||| | ||||| || || ||||| ||||| ||||||||||||||
Sbjct: 2862 tgcatcttgaagccagttaatatatcctcagtaacagagccataaatccacccaatctct 2803
Query: 1246 gttccccattcaatcttgtcctcgtagccacaacttatgacatggatagcttctttca 1303
||||||||||| | || || || || |||||||| |||||||| || ||||||||||
Sbjct: 2802 tttccccattcagttttatcttcataaccacaactaatgacatgaatggcttctttca 2745
Score = 69.9 bits (35), Expect = 7e-010
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 457 cccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagcttgccgaag 516
||||||||||||||||| ||||| || || ||||| || || ||||| ||||| ||||||
Sbjct: 3588 cccttgaggaacgggtaaaggtggacaattacccacaacgcaaagaatagcttaccgaag 3529
Query: 517 agcggacccca 527
|||||||||||
Sbjct: 3528 agcggacccca 3518
Score = 61.9 bits (31), Expect = 2e-007
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 2557 attggaaaccactttggaaactgatccaatatccaggaaagagcaaaccagatctcaca 2615
|||||| ||||||||||||||||||| |||||||| |||| |||||||| || |||||
Sbjct: 1479 attggataccactttggaaactgatctaatatccaagaaacggcaaaccatatttcaca 1421
Score = 50.1 bits (25), Expect = 6e-004
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 1809 gaagcacatagcttccctgagagccttactgttgttgatgtagtgatcacaatcaagatt 1868
||||||||| ||||| | || |||||||| ||||| || || ||||||||||||| |||
Sbjct: 2227 gaagcacatggcttcgcgaagtgccttactattgtttatataatgatcacaatcaacatt 2168
Query: 1869 caacatgta 1877
|| ||||||
Sbjct: 2167 cagcatgta 2159
Score = 42.1 bits (21), Expect = 0.15
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 763 atgacccagaactgctcgttcctccacca 791
||||||||||||||||| || ||||||||
Sbjct: 3285 atgacccagaactgctcatttctccacca 3257
>gb|CV130875.1|CV130875 X9SP07b02 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 882
Score = 103 bits (52), Expect = 5e-020
Identities = 106/124 (85%)
Strand = Plus / Minus
Query: 1186 tgcatcttgaacccagtgagaatatcttccgtcacagaaccatagatccacccaatctca 1245
|||||||||||||| || | ||||||||| || || |||||||||||||| ||||||||
Sbjct: 366 tgcatcttgaacccggtcaaaatatcttctgtaacggaaccatagatccatccaatctct 307
Query: 1246 gttccccattcaatcttgtcctcgtagccacaacttatgacatggatagcttctttcaga 1305
| ||||||||| ||||||| || || ||||| || || ||||||||||||||||||| |
Sbjct: 306 ttgccccattcagtcttgtcttcatatccacagctaataacatggatagcttctttcaaa 247
Query: 1306 agag 1309
||||
Sbjct: 246 agag 243
Score = 61.9 bits (31), Expect = 2e-007
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 499 aagaagagcttgccgaagagcggaccccacgactggtacccgctgttgatggcgtagga 557
|||||||||||||| ||||| |||||||| |||||||| || ||||| ||||| |||||
Sbjct: 710 aagaagagcttgccaaagagaggaccccatgactggtatccactgtttatggcatagga 652
>gb|DT509821.1|DT509821 WS02424.BR_N10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02424_N10 5', mRNA sequence
Length = 723
Score = 103 bits (52), Expect = 5e-020
Identities = 169/208 (81%)
Strand = Plus / Minus
Query: 1027 tagccgtaccatagggggcaatgccggctgaaaaggatttccactgaaccgagagcccac 1086
||||| ||||||| |||||| || || |||| ||| ||||| || ||||| | ||||||
Sbjct: 209 tagccataccatatggggcagtgacgactgagaagaatttcaacggaacccaaggcccac 150
Query: 1087 cggagcacctggttcagacggtctgagagattgatgggagccgatcccttgaaggccggc 1146
|| ||||| || || ||||| || || ||||| |||||||| |||||||| ||||| ||
Sbjct: 149 cgaagcacttgatttagacgatcagaaagattaatgggagcagatcccttaaaggcagga 90
Query: 1147 cgcttaggcatgcagtagatcgaccgccagcctcgtgcgtgcatcttgaacccagtgaga 1206
||||| |||||||| ||||| || | ||| || || || ||||||||||| || || ||
Sbjct: 89 cgcttcggcatgcaatagattgatctccaaccacgagcatgcatcttgaatcctgtaagg 30
Query: 1207 atatcttccgtcacagaaccatagatcc 1234
||||||||||| ||||||||||| ||||
Sbjct: 29 atatcttccgtaacagaaccatatatcc 2
Score = 67.9 bits (34), Expect = 3e-009
Identities = 142/178 (79%)
Strand = Plus / Minus
Query: 757 cctccgatgacccagaactgctcgttcctccaccactcgtcgatgcccacgccgctccac 816
||||| || ||||||||||| || ||||||||||| || ||||| || || || |||||
Sbjct: 479 cctccaataacccagaactgttcattcctccaccattcatcgatcccaacaccactccat 420
Query: 817 ctcatctccaggatacccgtggcgaagatcgagatgaagagagagatgaaccagatacta 876
||||| |||| ||||| || || ||||| || | ||||| || ||||||||||||||
Sbjct: 419 ctcatttccaaaataccagttgcaaagattgaaagaaagagggatatgaaccagatactg 360
Query: 877 gcgaagttgctgatctctgggatgatgaacttccccgtgagcaggcagatggcaggca 934
|| | ||| || |||| ||| || |||||||| ||||| || ||||| | ||||||||
Sbjct: 359 gcaatgttactaatctgtggaataatgaactttcccgtaagaaggcacacggcaggca 302
>gb|CA926289.1|CA926289 MTU6CR.P13.C05 Aspen root cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 429
Score = 101 bits (51), Expect = 2e-019
Identities = 206/255 (80%), Gaps = 2/255 (0%)
Strand = Plus / Minus
Query: 1723 gcatatcgatcattcctatcaataccatcgaacctctggggaaactgaacatagcagaca 1782
||||||| ||||| | ||| |||||||| |||||||| |||||||| ||||||||||
Sbjct: 359 gcatatctatcatggcgatcgataccatcaaacctctgcggaaactggacatagcagag- 301
Query: 1783 ctccttcctaggttagg-atccataaggaagcacatagcttccctgagagccttactgtt 1841
|| ||||| | ||| || |||||| | |||||||| ||||| || | |||||| |||||
Sbjct: 300 cttcttcccaagttggggatccatcaaaaagcacatggcttctcttacagccttgctgtt 241
Query: 1842 gttgatgtagtgatcacaatcaagattcaacatgtattgtccattggtaagcacagctga 1901
|||||||| || |||||||| | ||||||||| | || ||||||| ||||| |||||
Sbjct: 240 attgatgtaatggtcacaatccaaattcaacataaaaggtgcattggtgagcactgctga 181
Query: 1902 gacgcggacaagagcattcatggcaccagctttcttgtgatgctggaatccaggacgttt 1961
||| || | || |||||||||||||| ||||||||||| || | ||||||| |||||
Sbjct: 180 gactcgaatcagggcattcatggcacctgctttcttgtggtggttatatccaggtcgttt 121
Query: 1962 ttcacgagaaacata 1976
||||| ||||||||
Sbjct: 120 ctcacgggaaacata 106
>gb|AJ777820.1|AJ777820 AJ777820 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400035F01F1, mRNA sequence
Length = 658
Score = 99.6 bits (50), Expect = 8e-019
Identities = 272/345 (78%), Gaps = 1/345 (0%)
Strand = Plus / Minus
Query: 483 gatcacccagaaggcgaagaagagcttgccgaagagcggaccccacgactggtacccgct 542
|||||||||||| |||||||| |||||||| ||||| |||||||| ||||| || || ||
Sbjct: 638 gatcacccagaatgcgaagaaaagcttgccaaagagtggaccccatgactgataaccact 579
Query: 543 gttgatggcgtaggagatgccggcaacaacgccgaccaggtt-gatgatcaggatggtgg 601
|||||| || | ||| || || |||||||| || |||| ||| | ||| |||| || |
Sbjct: 578 gttgattgcatgggatatcccagcaacaacacccaccaagttanacgatgaggagagttg 519
Query: 602 tgggcgggatcagaagtgtcgtccacttgaacatgtacagctccgcgaagtcgccgtctt 661
| ||||||| || || || ||||| ||||||| ||| | || || || || ||||| |
Sbjct: 518 ttggcgggacaagtagagttgtccatttgaacaagtataattcagcaaaatcaccgtcct 459
Query: 662 catccgaggccttggaggtgacggtgaagttggtgtcgatgccggcaagcaccttgagga 721
| || || |||||||| || || |||||||||||||| ||||| ||||| || ||||| |
Sbjct: 458 cgtctgatgccttggacgtaacagtgaagttggtgtcaatgccagcaagtactttgagca 399
Query: 722 ggccctggaagacggcgaagaggtgggcggagatgcctccgatgacccagaactgctcgt 781
||| ||||| || || || || ||||| || | || ||||| ||||| ||||| || |
Sbjct: 398 agccttggaaaacagcaaaaagatgggctgaaacaccaccgataacccaaaactgttcat 339
Query: 782 tcctccaccactcgtcgatgcccacgccgctccacctcatctcca 826
||||||||||||| || || || || || ||||||||||||||||
Sbjct: 338 tcctccaccactcatcaatcccaacaccactccacctcatctcca 294
Score = 52.0 bits (26), Expect = 2e-004
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 1045 caatgccggctgaaaaggatttccactgaaccgagagcccaccggagcacctggttcaga 1104
|||||||| |||| ||| ||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 75 caatgccgactgagaagaatttcaacagaacccagagcccatcgaagcacttggttcaga 16
Query: 1105 cg 1106
||
Sbjct: 15 cg 14
>gb|CF227502.1|CF227502 PtaD6G2G0214 Poplar cDNA library from wood tissues Populus alba x
Populus tremula cDNA 5', mRNA sequence
Length = 747
Score = 95.6 bits (48), Expect = 1e-017
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 436 cggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatcacccagaag 495
|||||||| || ||||| |||||||||||||| ||||| || |||| |||||||||||
Sbjct: 230 cggttctggcgtcccatcagacccttgaggaaagggtaaagatgaataatcacccagaaa 171
Query: 496 gcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgttgatggcgtag 555
|| ||||| |||||||| ||||| |||||||| || || || || ||||| |||||||||
Sbjct: 170 gcaaagaaaagcttgccaaagaggggaccccaagattgataaccactgtttatggcgtag 111
Query: 556 gaga 559
||||
Sbjct: 110 gaga 107
>gb|CF232388.1|CF232388 PtaJXO0009H2H0216 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 629
Score = 95.6 bits (48), Expect = 1e-017
Identities = 200/251 (79%)
Strand = Plus / Minus
Query: 361 ggatcgatgcgaacccacagcaaggagaagatcgacgccagcaggatcgcccagacaacc 420
||||| || |||||||| |||||||||||||| || ||||| || | ||| | ||||
Sbjct: 601 ggatcaatccgaacccaaagcaaggagaagatggaagccaggagcnctgaccatataacc 542
Query: 421 acgatggtcggggtgcggttctgccgacccatgagacccttgaggaacgggtacaggtga 480
|| || ||||| || | ||| |||| ||||| ||||| |||||||| ||||| || ||
Sbjct: 541 acaatagtcggtgtcctgttttgcctccccattagacctttgaggaatgggtagagatgg 482
Query: 481 acgatcacccagaaggcgaagaagagcttgccgaagagcggaccccacgactggtacccg 540
|| |||||||||||||| ||||||||||| ||||| || || ||||| |||||||||||
Sbjct: 481 acaatcacccagaaggcaaagaagagcttcccgaatagaggtccccatgactggtaccca 422
Query: 541 ctgttgatggcgtaggagatgccggcaacaacgccgaccaggttgatgatcaggatggtg 600
|||| ||||| | |||| || |||||||| || || ||||||||||| | ||| |||
Sbjct: 421 ttgtttatggcatctgagactccagcaacaactccaacaaggttgatgattaagatagtg 362
Query: 601 gtgggcgggat 611
|| || |||||
Sbjct: 361 gttggagggat 351
>gb|CN519879.1|CN519879 GQ0108.B3_I06 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_I06 5', mRNA sequence
Length = 780
Score = 95.6 bits (48), Expect = 1e-017
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 436 cggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatcacccagaag 495
|||||||| || ||||| |||||||||||||| ||||| || |||| |||||||||||
Sbjct: 366 cggttctggcgtcccatcagacccttgaggaaagggtaaagatgaataatcacccagaaa 307
Query: 496 gcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgttgatggcgtag 555
|| ||||| |||||||| ||||| |||||||| || || || || ||||| |||||||||
Sbjct: 306 gcaaagaaaagcttgccaaagaggggaccccaagattgataaccactgtttatggcgtag 247
Query: 556 gaga 559
||||
Sbjct: 246 gaga 243
>gb|CV283069.1|CV283069 WS0186.B21_F15 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0186_F15 3', mRNA sequence
Length = 450
Score = 95.6 bits (48), Expect = 1e-017
Identities = 132/160 (82%)
Strand = Plus / Plus
Query: 436 cggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatcacccagaag 495
|||||||| |||||||| | ||| |||||||| || || || || | ||||||||||||
Sbjct: 191 cggttctggcgacccatcaaacctttgaggaaaggatagagatggatgatcacccagaaa 250
Query: 496 gcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgttgatggcgtag 555
|||||||| |||||||| ||||| |||||||| ||||| || || |||||||| || | |
Sbjct: 251 gcgaagaaaagcttgccaaagagtggaccccatgactgataaccactgttgattgcatgg 310
Query: 556 gagatgccggcaacaacgccgaccaggttgatgatcagga 595
|| || ||||||||||| || |||| ||||| ||| ||||
Sbjct: 311 gatatcccggcaacaacacccaccaagttgacgatgagga 350
>gb|DT470299.1|DT470299 WS01920.C21_H07 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01920_H07 3', mRNA sequence
Length = 439
Score = 95.6 bits (48), Expect = 1e-017
Identities = 132/160 (82%)
Strand = Plus / Plus
Query: 436 cggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatcacccagaag 495
|||||||| |||||||| | ||| |||||||| || || || || | ||||||||||||
Sbjct: 191 cggttctggcgacccatcaaacctttgaggaaaggatagagatggatgatcacccagaaa 250
Query: 496 gcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgttgatggcgtag 555
|||||||| |||||||| ||||| |||||||| ||||| || || |||||||| || | |
Sbjct: 251 gcgaagaaaagcttgccaaagagtggaccccatgactgataaccactgttgattgcatgg 310
Query: 556 gagatgccggcaacaacgccgaccaggttgatgatcagga 595
|| || ||||||||||| || |||| ||||| ||| ||||
Sbjct: 311 gatatcccggcaacaacacccaccaagttgacgatgagga 350
>gb|DT476519.1|DT476519 WS01229.B21_N17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_N17 3', mRNA sequence
Length = 853
Score = 95.6 bits (48), Expect = 1e-017
Identities = 105/124 (84%)
Strand = Plus / Plus
Query: 436 cggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatcacccagaag 495
|||||||| || ||||| |||||||||||||| ||||| || |||| |||||||||||
Sbjct: 453 cggttctggcgtcccatcagacccttgaggaaagggtaaagatgaataatcacccagaaa 512
Query: 496 gcgaagaagagcttgccgaagagcggaccccacgactggtacccgctgttgatggcgtag 555
|| ||||| |||||||| ||||| |||||||| || || || || ||||| |||||||||
Sbjct: 513 gcaaagaaaagcttgccaaagaggggaccccaagattgataaccactgtttatggcgtag 572
Query: 556 gaga 559
||||
Sbjct: 573 gaga 576
Score = 44.1 bits (22), Expect = 0.039
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 757 cctccgatgacccagaactgctcgttcctccaccactcgtcgatgcccacgccgctccac 816
||||| || |||||||||||||| || |||||||| ||||| || || || || |||||
Sbjct: 775 cctccaataacccagaactgctcatttctccaccattcgtcaatcccaacaccactccat 834
Query: 817 ctcatctcca 826
||||| ||||
Sbjct: 835 ctcatttcca 844
>gb|CF235713.1|CF235713 PtaJXT0026B7B0703 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 639
Score = 87.7 bits (44), Expect = 3e-015
Identities = 134/164 (81%)
Strand = Plus / Minus
Query: 2017 ccactgtgaccaaggaaaacctgaatcattccaggatggtccctggtattgtttcctggc 2076
||||||||||| || || || |||||||| ||||| || ||||| ||||||||||| |||
Sbjct: 180 ccactgtgaccgagaaatacttgaatcataccagggtgatccctcgtattgtttccaggc 121
Query: 2077 catggtgtgccatcttgcatgatccatccttcctcagggactttttgtgccttagcaaca 2136
|||||||| ||||||||||| ||||| || || ||| || || ||||| || || |||
Sbjct: 120 catggtgttccatcttgcataatccacccctctgtaggaaccttctgtgcttttgctaca 61
Query: 2137 aggccatttaccctaattttgaattcttcatattctctcttcat 2180
| |||||| || || ||||||||||| ||||||||||||||
Sbjct: 60 atcgcatttatccgaaccttgaattcttcgtattctctcttcat 17
Score = 65.9 bits (33), Expect = 1e-008
Identities = 120/149 (80%)
Strand = Plus / Minus
Query: 1633 ttgaaaacacagccagtgcccacataaactggtccttggatgccatcaagacctctcaag 1692
|||||||| || || ||||||||||| ||||| || || || ||||| ||||| ||| |
Sbjct: 564 ttgaaaacgcatcctgtgcccacatacactggaccctgaattccatctagacccttcatg 505
Query: 1693 ttaatatcgaaaaacacggtgttcctgttggcatatcgatcattcctatcaataccatcg 1752
|||||||| || || || ||||| |||||||| |||||||||| ||||||| |||||
Sbjct: 504 ttaatatcaaagaaaacagtgtttctgttggcgtatcgatcatgtgtatcaatgccatca 445
Query: 1753 aacctctggggaaactgaacatagcagac 1781
|| || || ||||| || || ||||||||
Sbjct: 444 aatctttgaggaaattgcacgtagcagac 416
>gb|AJ774508.1|AJ774508 AJ774508 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300021B12F1, mRNA sequence
Length = 655
Score = 87.7 bits (44), Expect = 3e-015
Identities = 134/164 (81%)
Strand = Plus / Minus
Query: 448 cccatgagacccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagc 507
||||| ||||| |||||||| ||||| || || || |||||||||||||| |||||||||
Sbjct: 488 cccattagacctttgaggaatgggtagagatggacaatcacccagaaggcaaagaagagc 429
Query: 508 ttgccgaagagcggaccccacgactggtacccgctgttgatggcgtaggagatgccggca 567
|| ||||| || || ||||| ||||||||||| |||| ||||| | |||| || |||
Sbjct: 428 ttcccgaatagaggtccccatgactggtacccattgtttatggcatctgagactccagca 369
Query: 568 acaacgccgaccaggttgatgatcaggatggtggtgggcgggat 611
||||| || || ||||||||||| | ||| ||||| || |||||
Sbjct: 368 acaactccaacaaggttgatgattaagatagtggttggagggat 325
>gb|AJ775294.1|AJ775294 AJ775294 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300030F05F1, mRNA sequence
Length = 385
Score = 87.7 bits (44), Expect = 3e-015
Identities = 134/164 (81%)
Strand = Plus / Minus
Query: 448 cccatgagacccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagc 507
||||| ||||| |||||||| ||||| || || || |||||||||||||| |||||||||
Sbjct: 219 cccattagacctttgaggaatgggtagagatggacaatcacccagaaggcaaagaagagc 160
Query: 508 ttgccgaagagcggaccccacgactggtacccgctgttgatggcgtaggagatgccggca 567
|| ||||| || || ||||| ||||||||||| |||| ||||| | |||| || |||
Sbjct: 159 ttcccgaatagaggtccccatgactggtacccattgtttatggcatctgagactccagca 100
Query: 568 acaacgccgaccaggttgatgatcaggatggtggtgggcgggat 611
||||| || || ||||||||||| | ||| ||||| || |||||
Sbjct: 99 acaactccaacaaggttgatgattaagatagtggttggagggat 56
>gb|AJ775532.1|AJ775532 AJ775532 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300033F04F1, mRNA sequence
Length = 589
Score = 87.7 bits (44), Expect = 3e-015
Identities = 134/164 (81%)
Strand = Plus / Minus
Query: 448 cccatgagacccttgaggaacgggtacaggtgaacgatcacccagaaggcgaagaagagc 507
||||| ||||| |||||||| ||||| || || || |||||||||||||| |||||||||
Sbjct: 343 cccattagacctttgaggaatgggtagagatggacaatcacccagaaggcaaagaagagc 284
Query: 508 ttgccgaagagcggaccccacgactggtacccgctgttgatggcgtaggagatgccggca 567
|| ||||| || || ||||| ||||||||||| |||| ||||| | |||| || |||
Sbjct: 283 ttcccgaatagaggtccccatgactggtacccattgtttatggcatctgagactccagca 224
Query: 568 acaacgccgaccaggttgatgatcaggatggtggtgggcgggat 611
||||| || || ||||||||||| | ||| ||||| || |||||
Sbjct: 223 acaactccaacaaggttgatgattaagatagtggttggagggat 180
>gb|CF235321.1|CF235321 PtaJXT0021D9D0907 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 486
Score = 85.7 bits (43), Expect = 1e-014
Identities = 136/167 (81%)
Strand = Plus / Minus
Query: 373 acccacagcaaggagaagatcgacgccagcaggatcgcccagacaaccacgatggtcggg 432
||||| |||||||||||||| || ||||| || | | ||| | |||||| || |||||
Sbjct: 206 acccaaagcaaggagaagatggaagccaggagcactgaccatataaccacaatagtcggt 147
Query: 433 gtgcggttctgccgacccatgagacccttgaggaacgggtacaggtgaacgatcacccag 492
|| | ||| |||| ||||| ||||| |||||||| ||||| || || || |||||||||
Sbjct: 146 gtcctgttttgcctccccattagacctttgaggaatgggtagagatggacaatcacccag 87
Query: 493 aaggcgaagaagagcttgccgaagagcggaccccacgactggtaccc 539
||||| ||||||||||| ||||| || || ||||| |||||||||||
Sbjct: 86 aaggcaaagaagagcttcccgaatagaggtccccatgactggtaccc 40
>gb|AJ771596.1|AJ771596 AJ771596 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600003B06F1, mRNA sequence
Length = 575
Score = 85.7 bits (43), Expect = 1e-014
Identities = 79/91 (86%)
Strand = Plus / Minus
Query: 1219 acagaaccatagatccacccaatctcagttccccattcaatcttgtcctcgtagccacaa 1278
||||||||||||||||| |||||||| | ||||||||| ||||||| || || |||||
Sbjct: 569 acagaaccatagatccatccaatctctttgccccattcagtcttgtcttcatatccacag 510
Query: 1279 cttatgacatggatagcttctttcagaagag 1309
|| || ||||||||||||||||||| |||||
Sbjct: 509 ctaataacatggatagcttctttcaaaagag 479
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 428,551
Number of Sequences: 369679
Number of extensions: 428551
Number of successful extensions: 117955
Number of sequences better than 0.5: 157
Number of HSP's better than 0.5 without gapping: 155
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 117370
Number of HSP's gapped (non-prelim): 524
length of query: 3782
length of database: 203,408,664
effective HSP length: 20
effective length of query: 3762
effective length of database: 196,015,084
effective search space: 737408746008
effective search space used: 737408746008
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)