BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440568.2.1
(1135 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU834455.1|BU834455 T061D07 Populus apical shoot cDNA li... 174 5e-042
gb|BU898126.1|BU898126 X075B09 Populus wood cDNA library Po... 174 5e-042
gb|DT470212.1|DT470212 WS01920.C21_D06 PT-DX-N-A-10 Populus... 174 5e-042
gb|CV241540.1|CV241540 WS02512.B21_I02 PT-MB-N-A-15 Populus... 167 1e-039
gb|CV260392.1|CV260392 WS02013.B21_P07 PTxN-IB-N-A-11 Popul... 167 1e-039
gb|BP935485.1|BP935485 BP935485 full-length enriched poplar... 157 1e-036
gb|CV255278.1|CV255278 WS02412.B21_J04 PTxD-ICC-N-A-14 Popu... 155 4e-036
gb|CX654383.1|CX654383 PO02003B12 Poplar SC cDNA library Po... 141 7e-032
gb|CF230605.1|CF230605 PtaC0010F10F1012 Poplar cDNA library... 135 4e-030
gb|BU818975.1|BU818975 UA37BPG11 Populus tremula cambium cD... 113 2e-023
gb|CK095944.1|CK095944 UA37BPG11.3pR Populus dormant cambiu... 113 2e-023
gb|BP930922.1|BP930922 BP930922 full-length enriched poplar... 100 2e-019
gb|BP934179.1|BP934179 BP934179 full-length enriched poplar... 100 2e-019
gb|DN486406.1|DN486406 P024F04.3pR Populus petioles cDNA li... 98 9e-019
gb|DT476984.1|DT476984 WS01231.B21_I17 PT-GT-FL-A-3 Populus... 92 6e-017
gb|AJ767677.1|AJ767677 AJ767677 Populus euphratica leaf adu... 84 1e-014
gb|CV251514.1|CV251514 WS0117.B21_E22 PT-P-FL-A-2 Populus t... 84 1e-014
gb|DT489644.1|DT489644 WS02542.B21_M16 PT-MB-N-A-15 Populus... 84 1e-014
gb|CV231925.1|CV231925 WS0195.B21_P13 PT-DX-N-A-10 Populus ... 74 1e-011
gb|CV232680.1|CV232680 WS0198.B21_F11 PT-DX-N-A-10 Populus ... 74 1e-011
gb|CK105764.1|CK105764 UA37BPG11.5pR Populus dormant cambiu... 70 2e-010
gb|CN523293.1|CN523293 GQ015M01.B3_K20 GQ015 Populus tricho... 70 2e-010
gb|CV244302.1|CV244302 WS0254.B21_E15 PT-MB-N-A-15 Populus ... 70 2e-010
gb|DT488013.1|DT488013 WS02535.B21_E10 PT-MB-N-A-15 Populus... 70 2e-010
gb|CV258775.1|CV258775 WS0201.B21_H18 PTxN-IB-N-A-11 Populu... 68 8e-010
gb|CV262321.1|CV262321 WS02019.B21_D21 PTxN-IB-N-A-11 Popul... 68 8e-010
gb|DT525036.1|DT525036 WS02044.C21_E07 PTxN-IB-N-A-11 Popul... 68 8e-010
gb|CN517317.1|CN517317 GQ0093.B3_N13 GQ009 Populus trichoca... 66 3e-009
gb|CN522037.1|CN522037 GQ0121.B3_I20 GQ012 Populus trichoca... 66 3e-009
gb|CV265894.1|CV265894 WS02028.B21_I18 PTxN-IB-N-A-11 Popul... 66 3e-009
gb|CX657984.1|CX657984 PO01007G09 Poplar SC cDNA library Po... 62 5e-008
gb|BP933971.1|BP933971 BP933971 full-length enriched poplar... 62 5e-008
gb|CK097189.1|CK097189 UB42BPH03.3pR Populus active cambium... 58 8e-007
gb|CX653816.1|CX653816 PO02007F04 Poplar SC cDNA library Po... 58 8e-007
gb|CX655265.1|CX655265 PO02032C07 Poplar SC cDNA library Po... 58 8e-007
gb|DT474321.1|DT474321 WS01231.BR_I17 PT-GT-FL-A-3 Populus ... 58 8e-007
gb|BU892887.1|BU892887 P070G01 Populus petioles cDNA librar... 56 3e-006
gb|CF231067.1|CF231067 PtaC0016H5H0515 Poplar cDNA library ... 56 3e-006
gb|CV227313.1|CV227313 WS0166.B21_N04 PT-DX-A-7 Populus tri... 56 3e-006
gb|CV227501.1|CV227501 WS0167.B21_F20 PT-DX-A-7 Populus tri... 56 3e-006
gb|DN486879.1|DN486879 P070G01.3pR Populus petioles cDNA li... 56 3e-006
gb|CK094925.1|CK094925 I061P45.3pR Populus senescing leaves... 54 1e-005
gb|DN495965.1|DN495965 P024F04.5pR Populus petioles cDNA li... 54 1e-005
gb|AJ777714.1|AJ777714 AJ777714 Populus euphratica root 3-6... 52 5e-005
gb|DV465858.1|DV465858 MTUNUL1.P44.A10 NUL Populus fremonti... 52 5e-005
gb|BI129134.1|BI129134 G086P40Y Populus cambium cDNA librar... 50 2e-004
gb|BU889088.1|BU889088 P016E10 Populus petioles cDNA librar... 50 2e-004
gb|CA926665.1|CA926665 MTU6CR.P17.G03 Aspen root cDNA Libra... 50 2e-004
gb|CK106998.1|CK106998 UB42BPH03.5pR Populus active cambium... 50 2e-004
gb|CN524284.1|CN524284 GQ015M15.T3_G10 GQ015 Populus tricho... 50 2e-004
gb|CK319701.1|CK319701 B9SP10a12 Populus stem seasonal libr... 50 2e-004
gb|AJ774048.1|AJ774048 AJ774048 Populus euphratica shoot 3-... 50 2e-004
gb|CV262787.1|CV262787 WS0202.B21_I06 PTxN-IB-N-A-11 Populu... 50 2e-004
gb|CV272599.1|CV272599 WS0158.B21_B21 PTxN-IB-A-6 Populus t... 50 2e-004
gb|BP927973.1|BP927973 BP927973 full-length enriched poplar... 50 2e-004
gb|DT499103.1|DT499103 WS0117.BR_E22 PT-P-FL-A-2 Populus tr... 50 2e-004
gb|DT523716.1|DT523716 WS02040.B21_H06 PTxN-IB-N-A-11 Popul... 50 2e-004
gb|AJ771987.1|AJ771987 AJ771987 Populus euphratica root 3-6... 46 0.003
gb|CV254194.1|CV254194 WS0224.B21_F13 PTxD-ICC-A-12 Populus... 46 0.003
gb|BP923172.1|BP923172 BP923172 full-length enriched poplar... 46 0.003
gb|DT480813.1|DT480813 WS02530.BR_A05 PT-MB-N-A-15 Populus ... 46 0.003
gb|DT486092.1|DT486092 WS02530.B21_A05 PT-MB-N-A-15 Populus... 46 0.003
gb|BI125462.1|BI125462 I061P45P Populus leaf cDNA library P... 42 0.046
gb|BU892721.1|BU892721 P068E11 Populus petioles cDNA librar... 42 0.046
gb|BU896893.1|BU896893 X047D09 Populus wood cDNA library Po... 42 0.046
gb|CF227940.1|CF227940 PtaXM0006F8F0812 Poplar cDNA library... 42 0.046
gb|CF231155.1|CF231155 PtaC0018A8A0802 Poplar cDNA library ... 42 0.046
gb|CK104876.1|CK104876 I061P45.5pR Populus senescing leaves... 42 0.046
gb|CV237060.1|CV237060 WS01226.B21.1_J14 PT-GT-FL-A-3 Popul... 42 0.046
gb|CV260481.1|CV260481 WS02014.B21_D03 PTxN-IB-N-A-11 Popul... 42 0.046
gb|CV263090.1|CV263090 WS02020.B21_F06 PTxN-IB-N-A-11 Popul... 42 0.046
gb|CV265054.1|CV265054 WS02026.B21_D07 PTxN-IB-N-A-11 Popul... 42 0.046
gb|DN496444.1|DN496444 P068E11.5pR Populus petioles cDNA li... 42 0.046
gb|DT488699.1|DT488699 WS02537.B21_C18 PT-MB-N-A-15 Populus... 42 0.046
gb|AI161531.1|AI161531 A002P20U Hybrid aspen plasmid librar... 40 0.18
gb|BI122738.1|BI122738 I012P28P Populus leaf cDNA library P... 40 0.18
gb|BU894276.1|BU894276 X005E10 Populus wood cDNA library Po... 40 0.18
gb|CN520839.1|CN520839 GQ0107.B3_B08 GQ010 Populus trichoca... 40 0.18
gb|AJ770092.1|AJ770092 AJ770092 Populus euphratica leaf 3-6... 40 0.18
gb|CX658932.1|CX658932 PO01024C07 Poplar SC cDNA library Po... 40 0.18
gb|CX659066.1|CX659066 PO01026B04 Poplar SC cDNA library Po... 40 0.18
>gb|BU834455.1|BU834455 T061D07 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 718
Score = 174 bits (88), Expect = 5e-042
Identities = 262/320 (81%)
Strand = Plus / Minus
Query: 399 tcaacacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactc 458
||||||||||| |||||||||| || || ||| ||||||||||||| ||||| ||||||
Sbjct: 474 tcaacacactgcttaaccttgtcctcactgagttttggtgtagcccatgtcactagactc 415
Query: 459 tgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaaga 518
|||||||| | ||| || || || || ||||||||||||||||||| |||||||| ||
Sbjct: 414 tgctgtccacgtggtaaagtgtgatcaacaggtttcctcccagtcagaagctcaagcagg 355
Query: 519 acaaccccaaaactatatacatcactcttagagctgagttgcccagtcatcgcatactca 578
|||| ||||||||| || ||||||||||| | | | ||| |||||||| ||||| ||
Sbjct: 354 acaaacccaaaactgtacacatcactctttgcattcaattgtccagtcattgcatattcg 295
Query: 579 ggcgcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctgccatgtca 638
|| ||||| || || |||||||| ||||| | ||| || ||||| || |||||||| |||
Sbjct: 294 ggagcatgataaccaaatgttcccagaactcgagtggaatgaagacgtgctgccatatca 235
Query: 639 ggagcttggttcgacagatcaaagtcagcgatcttagctacatcgtcatcgaaaagaagg 698
|||||||| || |||| ||||||||| || || || || ||||| |||||||||| |||
Sbjct: 234 ggagcttgatttgacaaatcaaagtcggcaatttttgcaacatcatcatcgaaaataaga 175
Query: 699 acgttgctagacttgatgtc 718
|| ||||| ||||| |||||
Sbjct: 174 acattgctggacttaatgtc 155
Score = 81.8 bits (41), Expect = 5e-014
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 261 gcattcagcaggggttgtagcgccttgacaacaatgctcatgttcggccggaagtccgct 320
||||| |||||||| ||||| || || || |||||||||||||| |||||||| || |||
Sbjct: 612 gcatttagcaggggctgtagggctttaaccacaatgctcatgtttggccggaaatcagct 553
Query: 321 tcgtattgaacacacaaggcggcgacagc 349
|||||||| ||||||||||| || |||||
Sbjct: 552 tcgtattgcacacacaaggcagcaacagc 524
>gb|BU898126.1|BU898126 X075B09 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 666
Score = 174 bits (88), Expect = 5e-042
Identities = 262/320 (81%)
Strand = Plus / Minus
Query: 399 tcaacacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactc 458
||||||||||| |||||||||| || || ||| ||||||||||||| ||||| ||||||
Sbjct: 531 tcaacacactgcttaaccttgtcctcactgagttttggtgtagcccatgtcactagactc 472
Query: 459 tgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaaga 518
|||||||| | ||| || || || || ||||||||||||||||||| |||||||| ||
Sbjct: 471 tgctgtccacgtggtaaagtgtgatcaacaggtttcctcccagtcagaagctcaagcagg 412
Query: 519 acaaccccaaaactatatacatcactcttagagctgagttgcccagtcatcgcatactca 578
||||| |||||||| || ||||||||||| | | | ||| |||||||| ||||| ||
Sbjct: 411 acaacaccaaaactgtacacatcactctttgcattcaattgtccagtcattgcatattcg 352
Query: 579 ggcgcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctgccatgtca 638
|| ||||| || || |||||||| ||||| | ||| || ||||| || |||||||| |||
Sbjct: 351 ggagcatgataaccaaatgttcccagaactcgagtggaatgaagacgtgctgccatatca 292
Query: 639 ggagcttggttcgacagatcaaagtcagcgatcttagctacatcgtcatcgaaaagaagg 698
|||||||| || |||| ||||||||| || || || || ||||| |||||||||| |||
Sbjct: 291 ggagcttgatttgacaaatcaaagtcggcaatttttgcaacatcatcatcgaaaataaga 232
Query: 699 acgttgctagacttgatgtc 718
|| ||||| ||||| |||||
Sbjct: 231 acattgctggacttaatgtc 212
Score = 77.8 bits (39), Expect = 8e-013
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 267 agcaggggttgtagcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtat 326
|||||||| ||||| || || || |||||||||||||| |||||||| || |||||||||
Sbjct: 663 agcaggggctgtagggctttaaccacaatgctcatgtttggccggaaatcagcttcgtat 604
Query: 327 tgaacacacaaggcggcgacagc 349
|| ||||||||||| || |||||
Sbjct: 603 tgcacacacaaggcagcaacagc 581
Score = 60.0 bits (30), Expect = 2e-007
Identities = 75/90 (83%)
Strand = Plus / Minus
Query: 816 ggaccgggttgagcccctttaacccctttccttccatgaagcatatcatgaagggaaccc 875
||||| ||||| || |||||||| |||||||| |||||||| ||||||||||| || ||
Sbjct: 114 ggaccaggttgtgctcctttaacacctttcctcccatgaagaatatcatgaagagatcca 55
Query: 876 attgtagcgaactcataagcaaggacgcgg 905
| | ||| || ||||||||||| ||||||
Sbjct: 54 ttagaagcaaattcataagcaagtacgcgg 25
>gb|DT470212.1|DT470212 WS01920.C21_D06 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01920_D06 3', mRNA sequence
Length = 862
Score = 174 bits (88), Expect = 5e-042
Identities = 262/320 (81%)
Strand = Plus / Plus
Query: 399 tcaacacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactc 458
||||||||||| |||||||||| || || ||| ||||||||||||| ||||| ||||||
Sbjct: 438 tcaacacactgcttaaccttgtcctcactgagttttggtgtagcccatgtcactagactc 497
Query: 459 tgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaaga 518
|||||||| | ||| || || || || ||||||||||||||||||| |||||||| ||
Sbjct: 498 tgctgtccacgtggtaaagtgtgatcaacaggtttcctcccagtcagaagctcaagcagg 557
Query: 519 acaaccccaaaactatatacatcactcttagagctgagttgcccagtcatcgcatactca 578
||||| |||||||| || ||||||||||| | | | ||| |||||||| ||||| ||
Sbjct: 558 acaacaccaaaactgtacacatcactctttgcattcaattgtccagtcattgcatattcg 617
Query: 579 ggcgcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctgccatgtca 638
|| ||||| || || |||||||| ||||| | ||| || ||||| || |||||||| |||
Sbjct: 618 ggagcatgataaccaaatgttcccagaactcgagtggaatgaagacgtgctgccatatca 677
Query: 639 ggagcttggttcgacagatcaaagtcagcgatcttagctacatcgtcatcgaaaagaagg 698
|||||||| || |||| ||||||||| || || || || ||||| |||||||||| |||
Sbjct: 678 ggagcttgatttgacaaatcaaagtcggcaatttttgcaacatcatcatcgaaaataaga 737
Query: 699 acgttgctagacttgatgtc 718
|| ||||| ||||| |||||
Sbjct: 738 acattgctggacttaatgtc 757
Score = 73.8 bits (37), Expect = 1e-011
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 261 gcattcagcaggggttgtagcgccttgacaacaatgctcatgttcggccggaagtccgct 320
||||| |||||||| || || || || || |||||||||||||| |||||||| || |||
Sbjct: 300 gcatttagcaggggctggagagctttaaccacaatgctcatgtttggccggaaatcagct 359
Query: 321 tcgtattgaacacacaaggcggcgacagc 349
|||||||| ||||||||||| || |||||
Sbjct: 360 tcgtattgcacacacaaggcagcaacagc 388
>gb|CV241540.1|CV241540 WS02512.B21_I02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02512_I02 3', mRNA sequence
Length = 714
Score = 167 bits (84), Expect = 1e-039
Identities = 261/320 (81%)
Strand = Plus / Plus
Query: 399 tcaacacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactc 458
||||||||||| |||||||||| || || ||| ||||||||||||| ||||| ||||||
Sbjct: 304 tcaacacactgcttaaccttgtcctcactgagttttggtgtagcccatgtcactagactc 363
Query: 459 tgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaaga 518
|||||||| | ||| || || || || ||||||||||||||||||| |||||||| ||
Sbjct: 364 tgctgtccacgtggtaaagtgtgatcaacaggtttcctcccagtcagaagctcaagcagg 423
Query: 519 acaaccccaaaactatatacatcactcttagagctgagttgcccagtcatcgcatactca 578
||||| |||||||| || ||||||||||| | | | ||| |||||||| ||||| ||
Sbjct: 424 acaacaccaaaactgtacacatcactctttgcattcaattgtccagtcattgcatattcg 483
Query: 579 ggcgcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctgccatgtca 638
|| ||||| || || |||||||| ||||| | ||| || ||||| || |||||||| |||
Sbjct: 484 ggagcatgataaccaaatgttcccagaactcgagtggaatgaagacgtgctgccatatca 543
Query: 639 ggagcttggttcgacagatcaaagtcagcgatcttagctacatcgtcatcgaaaagaagg 698
|||||||| || |||| ||||||||| || || || || ||||| ||||| |||| |||
Sbjct: 544 ggagcttgatttgacaaatcaaagtcggcaatttttgcaacatcatcatcaaaaataaga 603
Query: 699 acgttgctagacttgatgtc 718
|| ||||| ||||| |||||
Sbjct: 604 acattgctggacttaatgtc 623
Score = 73.8 bits (37), Expect = 1e-011
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 261 gcattcagcaggggttgtagcgccttgacaacaatgctcatgttcggccggaagtccgct 320
||||| |||||||| || || || || || |||||||||||||| |||||||| || |||
Sbjct: 166 gcatttagcaggggctggagggctttaaccacaatgctcatgtttggccggaaatcagct 225
Query: 321 tcgtattgaacacacaaggcggcgacagc 349
|||||||| ||||||||||| || |||||
Sbjct: 226 tcgtattgcacacacaaggcagcaacagc 254
>gb|CV260392.1|CV260392 WS02013.B21_P07 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02013_P07 3', mRNA sequence
Length = 877
Score = 167 bits (84), Expect = 1e-039
Identities = 306/380 (80%)
Strand = Plus / Plus
Query: 264 ttcagcaggggttgtagcgccttgacaacaatgctcatgttcggccggaagtccgcttcg 323
||||| || ||||| ||||||||||||||||||||||| || |||||||| || |||||
Sbjct: 334 ttcagaagtggttggagcgccttgacaacaatgctcatatttggccggaactcagcttca 393
Query: 324 tattgaacacacaaggcggcgacagccgcaaacttcgcaacagctttaggaggatagtcc 383
|| || ||||| || || || ||||| || | ||| ||||| ||||||| ||||| ||
Sbjct: 394 tactgcacacataacgctgccacagctgccagcttggcaactcctttagggggatattct 453
Query: 384 cctccaagtcttgagtcaacacactgtctaaccttgtcttcgctaagtcttggtgtagcc 443
||| || ||| || ||||| ||| |||| |||||||| || |||||||||||||||
Sbjct: 454 cctttcagctttggatctacacattgtttaactttgtcttcactcagtcttggtgtagcc 513
Query: 444 caggtcacaagactctgctgtccccttggcaatgtatggtcgacaggtttcctcccagtc 503
|| || ||||||||||||||||| | ||||| ||||| || |||||||||||||||||
Sbjct: 514 catgtaacaagactctgctgtccgcgtggcatggtatgatcaacaggtttcctcccagta 573
Query: 504 aacagctcaagaagaacaaccccaaaactatatacatcactcttagagctgagttgccca 563
| ||||| || ||||| || |||||||| || ||||||||||| | | ||| |||
Sbjct: 574 agaagctctaggagaactactccaaaactgtaaacatcactcttctgtgtcaattgtcca 633
Query: 564 gtcatcgcatactcaggcgcatggtatccgaatgttccgagaaccctagttgagtgaagc 623
||||| ||||||||||| ||||| || || || ||||| | ||| | |||||| |||||
Sbjct: 634 gtcattgcatactcaggagcatgataaccaaaggttcctaaaactcgagttgaatgaagg 693
Query: 624 cgagctgccatgtcaggagc 643
||||| ||||||||||||||
Sbjct: 694 cgagcagccatgtcaggagc 713
>gb|BP935485.1|BP935485 BP935485 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-077_K05.r 3', mRNA sequence
Length = 641
Score = 157 bits (79), Expect = 1e-036
Identities = 238/291 (81%)
Strand = Plus / Plus
Query: 399 tcaacacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactc 458
||||||||||| |||||||||| || || ||| ||||||||||||| ||||| ||||||
Sbjct: 351 tcaacacactgcttaaccttgtcctcactgagttttggtgtagcccatgtcactagactc 410
Query: 459 tgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaaga 518
|||||||| | ||| || || || || ||||||||||||||||||| |||||||| ||
Sbjct: 411 tgctgtccacgtggtaaagtgtgatcaacaggtttcctcccagtcagaagctcaagcagg 470
Query: 519 acaaccccaaaactatatacatcactcttagagctgagttgcccagtcatcgcatactca 578
||||| |||||||| || ||||||||||| | | | ||| |||||||| ||||| ||
Sbjct: 471 acaacaccaaaactgtacacatcactctttgcattcaattgtccagtcattgcatattcg 530
Query: 579 ggcgcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctgccatgtca 638
|| ||||| || || |||||||| ||||| | ||| || ||||| || |||||||| |||
Sbjct: 531 ggagcatgataaccaaatgttcccagaactcgagtggaatgaagacgtgctgccatatca 590
Query: 639 ggagcttggttcgacagatcaaagtcagcgatcttagctacatcgtcatcg 689
|||||||| || |||| ||||||||| || || || || ||||| ||||||
Sbjct: 591 ggagcttgatttgacaaatcaaagtcggcaatttttgcaacatcatcatcg 641
Score = 65.9 bits (33), Expect = 3e-009
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 261 gcattcagcaggggttgtagcgccttgacaacaatgctcatgttcggccggaagtccgct 320
||||| |||||||| || || || || || ||||| |||||||| |||||||| || |||
Sbjct: 213 gcatttagcaggggctggagggctttaaccacaatactcatgtttggccggaaatcagct 272
Query: 321 tcgtattgaacacacaaggcggcgacagc 349
|||||||| ||||||||||| || |||||
Sbjct: 273 tcgtattgcacacacaaggcagcaacagc 301
>gb|CV255278.1|CV255278 WS02412.B21_J04 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02412_J04 3', mRNA sequence
Length = 708
Score = 155 bits (78), Expect = 4e-036
Identities = 219/266 (82%)
Strand = Plus / Plus
Query: 399 tcaacacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactc 458
||||||||||| |||||||||| || || ||| ||||||||||||| ||||| ||||||
Sbjct: 428 tcaacacactgcttaaccttgtcctcactgagttttggtgtagcccatgtcactagactc 487
Query: 459 tgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaaga 518
|||||||| | ||| || || || || ||||||||||||||||||| |||||||| ||
Sbjct: 488 tgctgtccacgtggtaaagtgtgatcaacaggtttcctcccagtcagaagctcaagcagg 547
Query: 519 acaaccccaaaactatatacatcactcttagagctgagttgcccagtcatcgcatactca 578
||||| |||||||| || ||||||||||| | | | ||| |||||||| ||||| ||
Sbjct: 548 acaacaccaaaactgtacacatcactctttgcattcaattgtccagtcattgcatattcg 607
Query: 579 ggcgcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctgccatgtca 638
|| ||||| || || |||||||| ||||| | ||| || ||||| || |||||||| |||
Sbjct: 608 ggagcatgataaccaaatgttcccagaactcgagtggaatgaagacgtgctgccatatca 667
Query: 639 ggagcttggttcgacagatcaaagtc 664
|||||||| || |||| |||||||||
Sbjct: 668 ggagcttgatttgacaaatcaaagtc 693
Score = 73.8 bits (37), Expect = 1e-011
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 261 gcattcagcaggggttgtagcgccttgacaacaatgctcatgttcggccggaagtccgct 320
||||| |||||||| || || || || || |||||||||||||| |||||||| || |||
Sbjct: 290 gcatttagcaggggctggagggctttaaccacaatgctcatgtttggccggaaatcagct 349
Query: 321 tcgtattgaacacacaaggcggcgacagc 349
|||||||| ||||||||||| || |||||
Sbjct: 350 tcgtattgcacacacaaggcagcaacagc 378
>gb|CX654383.1|CX654383 PO02003B12 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02003B12 5', mRNA sequence
Length = 584
Score = 141 bits (71), Expect = 7e-032
Identities = 284/355 (80%)
Strand = Plus / Minus
Query: 285 ttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaaggcggcg 344
||||| |||||||||||||| |||||||| || || || ||||| ||||||||||| ||
Sbjct: 355 ttgaccacaatgctcatgtttggccggaaatcagcctcatattgcacacacaaggcagca 296
Query: 345 acagccgcaaacttcgcaacagctttaggaggatagtcccctccaagtcttgagtcaaca 404
|| || || | ||| ||||| || || || || || || ||| | ||||| ||||||
Sbjct: 295 acggcagccatctttgcaactgccttgggtgggtactctccttgtaatcttgcatcaaca 236
Query: 405 cactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgctgt 464
||||| |||||||||| ||||||||| ||||||| ||||| ||||| ||||||||||||
Sbjct: 235 cactgcttaaccttgtcctcgctaagttttggtgttgcccatgtcactagactctgctgt 176
Query: 465 ccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaagaacaacc 524
|| | ||| || || || || ||||||||||||||||||| |||||||| || |||||
Sbjct: 175 ccacgtggtaaagtgtgatcaacaggtttcctcccagtcagaagctcaagcaggacaaca 116
Query: 525 ccaaaactatatacatcactcttagagctgagttgcccagtcatcgcatactcaggcgca 584
|||||||| || || |||||||| | | | ||| |||||||| ||||| ||||| |||
Sbjct: 115 ccaaaactgtacacgtcactctttgcattcaattgtccagtcattgcatattcaggagca 56
Query: 585 tggtatccgaatgttccgagaaccctagttgagtgaagccgagctgccatgtcag 639
|| || || |||||||| | ||| | ||| || ||||| || |||||||| ||||
Sbjct: 55 tgataaccaaatgttcccaaaactcgagtggaatgaagacgtgctgccatatcag 1
>gb|CF230605.1|CF230605 PtaC0010F10F1012 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 645
Score = 135 bits (68), Expect = 4e-030
Identities = 302/380 (79%)
Strand = Plus / Minus
Query: 264 ttcagcaggggttgtagcgccttgacaacaatgctcatgttcggccggaagtccgcttcg 323
||||| || ||||| || ||||||||||| |||||||| || |||||||| || | |||
Sbjct: 457 ttcagaagtggttggagagccttgacaacgatgctcatatttggccggaactcagattca 398
Query: 324 tattgaacacacaaggcggcgacagccgcaaacttcgcaacagctttaggaggatagtcc 383
|| || ||||| ||||| || ||||| || ||||| ||||| |||||||||| || ||
Sbjct: 397 tactgcacacataaggctgccacagctgccaacttggcaactcctttaggagggtattct 338
Query: 384 cctccaagtcttgagtcaacacactgtctaaccttgtcttcgctaagtcttggtgtagcc 443
||| || ||| || ||||| ||| |||| |||||||| || |||||||||||||||
Sbjct: 337 cctttcagctttggatctacacattgtttaactttgtcttcactcagtcttggtgtagcc 278
Query: 444 caggtcacaagactctgctgtccccttggcaatgtatggtcgacaggtttcctcccagtc 503
|| || ||||| ||||||||||| | ||||| ||||| || |||||||||||||||||
Sbjct: 277 catgtaacaaggctctgctgtccacgtggcatggtatgatcaacaggtttcctcccagta 218
Query: 504 aacagctcaagaagaacaaccccaaaactatatacatcactcttagagctgagttgccca 563
| ||||| || ||||| || || ||||| || ||||||||||| | | ||| |||
Sbjct: 217 agaagctctaggagaactactccgaaactgtaaacatcactcttctgtgtcaattgtcca 158
Query: 564 gtcatcgcatactcaggcgcatggtatccgaatgttccgagaaccctagttgagtgaagc 623
||||| ||||||||||| ||||| || || || ||||| | ||| | ||| || |||||
Sbjct: 157 gtcattgcatactcaggagcatgataaccaaaggttcctaaaactcgagtagaatgaagg 98
Query: 624 cgagctgccatgtcaggagc 643
||||| ||||||||||||||
Sbjct: 97 cgagcagccatgtcaggagc 78
>gb|BU818975.1|BU818975 UA37BPG11 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 487
Score = 113 bits (57), Expect = 2e-023
Identities = 126/149 (84%)
Strand = Plus / Minus
Query: 399 tcaacacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactc 458
||||||||||| |||||||||| || || ||| ||||||||||||| ||||| ||||||
Sbjct: 202 tcaacacactgcttaaccttgtcctcactgagttttggtgtagcccatgtcactagactc 143
Query: 459 tgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaaga 518
|||||||| | ||| || || || || ||||||||||||||||||| | |||||| ||
Sbjct: 142 tgctgtccacgtggtaaagtgtgatcaacaggtttcctcccagtcagaaactcaagcagg 83
Query: 519 acaaccccaaaactatatacatcactctt 547
||||| |||||||| || |||||||||||
Sbjct: 82 acaacaccaaaactgtacacatcactctt 54
Score = 81.8 bits (41), Expect = 5e-014
Identities = 77/89 (86%)
Strand = Plus / Minus
Query: 261 gcattcagcaggggttgtagcgccttgacaacaatgctcatgttcggccggaagtccgct 320
||||| |||||||| ||||| || || || |||||||||||||| |||||||| || |||
Sbjct: 340 gcatttagcaggggctgtagggctttaaccacaatgctcatgtttggccggaaatcagct 281
Query: 321 tcgtattgaacacacaaggcggcgacagc 349
|||||||| ||||||||||| || |||||
Sbjct: 280 tcgtattgcacacacaaggcagcaacagc 252
>gb|CK095944.1|CK095944 UA37BPG11.3pR Populus dormant cambium cDNA library Populus tremula
cDNA clone UA37BPG11 3', mRNA sequence
Length = 483
Score = 113 bits (57), Expect = 2e-023
Identities = 126/149 (84%)
Strand = Plus / Plus
Query: 399 tcaacacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactc 458
||||||||||| |||||||||| || || ||| ||||||||||||| ||||| ||||||
Sbjct: 280 tcaacacactgcttaaccttgtcctcactgagttttggtgtagcccatgtcactagactc 339
Query: 459 tgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaaga 518
|||||||| | ||| || || || || ||||||||||||||||||| | |||||| ||
Sbjct: 340 tgctgtccacgtggtaaagtgtgatcaacaggtttcctcccagtcagaaactcaagcagg 399
Query: 519 acaaccccaaaactatatacatcactctt 547
||||| |||||||| || |||||||||||
Sbjct: 400 acaacaccaaaactgtacacatcactctt 428
Score = 81.8 bits (41), Expect = 5e-014
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 261 gcattcagcaggggttgtagcgccttgacaacaatgctcatgttcggccggaagtccgct 320
||||| |||||||| ||||| || || || |||||||||||||| |||||||| || |||
Sbjct: 142 gcatttagcaggggctgtagggctttaaccacaatgctcatgtttggccggaaatcagct 201
Query: 321 tcgtattgaacacacaaggcggcgacagc 349
|||||||| ||||||||||| || |||||
Sbjct: 202 tcgtattgcacacacaaggcagcaacagc 230
>gb|BP930922.1|BP930922 BP930922 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-016_I08.r 3', mRNA sequence
Length = 523
Score = 99.6 bits (50), Expect = 2e-019
Identities = 149/182 (81%)
Strand = Plus / Plus
Query: 285 ttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaaggcggcg 344
||||| |||||||||||||| |||||||| || || || ||||| ||||||||||| ||
Sbjct: 333 ttgaccacaatgctcatgtttggccggaaatcagcctcatattgcacacacaaggcagca 392
Query: 345 acagccgcaaacttcgcaacagctttaggaggatagtcccctccaagtcttgagtcaaca 404
|| || || | ||| ||||| || || || || || || ||| | ||||| ||||||
Sbjct: 393 acggcagccatctttgcaactgccttgggtgggtactctccttgtaatcttgcatcaaca 452
Query: 405 cactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgctgt 464
||||| |||||||||| ||||||||| ||||||||||||| ||||| ||||||||||||
Sbjct: 453 cactgcttaaccttgtcctcgctaagttttggtgtagcccatgtcactagactctgctgt 512
Query: 465 cc 466
||
Sbjct: 513 cc 514
>gb|BP934179.1|BP934179 BP934179 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-061_F22.r 3', mRNA sequence
Length = 553
Score = 99.6 bits (50), Expect = 2e-019
Identities = 126/150 (84%), Gaps = 1/150 (0%)
Strand = Plus / Plus
Query: 399 tcaacacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactc 458
||||||||||| |||||||||| || || ||| ||||||||||||| ||||| ||||||
Sbjct: 350 tcaacacactgcttaaccttgtcctcactgagttttggtgtagcccatgtcactagactc 409
Query: 459 tgctgtcc-ccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaag 517
|||||||| | ||| || || | || ||||||||||||||||||| |||||||| ||
Sbjct: 410 tgctgtccacgctggtaaagtgcgatcaacaggtttcctcccagtcagaagctcaagcag 469
Query: 518 aacaaccccaaaactatatacatcactctt 547
||||| |||||||| || |||||||||||
Sbjct: 470 gacaacaccaaaactgtacacatcactctt 499
Score = 65.9 bits (33), Expect = 3e-009
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 261 gcattcagcaggggttgtagcgccttgacaacaatgctcatgttcggccggaagtccgct 320
||||| |||||||| || || || || || ||||| |||||||| |||||||| || |||
Sbjct: 212 gcatttagcaggggctggagggctttaaccacaatactcatgtttggccggaaatcagct 271
Query: 321 tcgtattgaacacacaaggcggcgacagc 349
|||||||| ||||||||||| || |||||
Sbjct: 272 tcgtattgcacacacaaggcagcaacagc 300
>gb|DN486406.1|DN486406 P024F04.3pR Populus petioles cDNA library Populus tremula cDNA
clone P024F04 3', mRNA sequence
Length = 751
Score = 97.6 bits (49), Expect = 9e-019
Identities = 227/285 (79%), Gaps = 1/285 (0%)
Strand = Plus / Plus
Query: 264 ttcagcaggggttgtagcgccttgacaacaatgctcatgttcggccggaagtccgcttcg 323
||||| || ||||| || ||||||||||| |||||||| || |||||||| || | |||
Sbjct: 327 ttcagaagtggttggagagccttgacaacgatgctcatatttggccggaactcagattca 386
Query: 324 tattgaacacacaaggcggcgacagccgcaaacttcgcaacagctttaggaggatagtcc 383
|| || ||||| ||||| || ||||| || ||||| ||||| |||||||||| || ||
Sbjct: 387 tactgcacacataaggctgccacagctgccaacttggcaactcctttaggagggtattct 446
Query: 384 cctccaagtcttgagtcaacacactgtctaaccttgtcttcgctaagtcttggtgtagcc 443
||| || ||| || ||||| ||| |||| |||||||| || |||||||||||||||
Sbjct: 447 cctttcagctttggatctacacattgtttaactttgtcttcactcagtcttggtgtagcc 506
Query: 444 caggtcacaagactctgctgtccccttggcaat-gtatggtcgacaggtttcctcccagt 502
|| || ||||| ||||||||||| | |||| | ||||| || ||||||||||||||| |
Sbjct: 507 catgtaacaaggctctgctgtccacgtggcggtggtatgatcaacaggtttcctcccaat 566
Query: 503 caacagctcaagaagaacaaccccaaaactatatacatcactctt 547
| ||||| || ||||| || || ||||| || |||||||||||
Sbjct: 567 aagaagctctaggagaactactccgaaactgtaaacatcactctt 611
>gb|DT476984.1|DT476984 WS01231.B21_I17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01231_I17 3', mRNA sequence
Length = 938
Score = 91.7 bits (46), Expect = 6e-017
Identities = 193/242 (79%)
Strand = Plus / Plus
Query: 402 acacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgc 461
||||| ||| |||| |||||||| || |||||||| || ||||| || |||||||||||
Sbjct: 295 acacattgtttaactttgtcttcactcagtcttggagttgcccaagtaacaagactctgt 354
Query: 462 tgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaagaaca 521
|| || | ||||| || || || ||||||||||||||||| | ||||| || |||||
Sbjct: 355 tgcccacgtggcatggtgtgatcaacaggtttcctcccagtaagaagctctaggagaact 414
Query: 522 accccaaaactatatacatcactcttagagctgagttgcccagtcatcgcatactcaggc 581
|| |||||||| || ||||| ||||| | | ||| |||||||| |||||||||||
Sbjct: 415 actccaaaactgtaaacatcgctcttctgtgtcaattgtccagtcattgcatactcagga 474
Query: 582 gcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctgccatgtcagga 641
||||| || || || ||||| | ||| | |||||| ||||| ||||| ||||||||||||
Sbjct: 475 gcatgataaccaaaggttcctaaaactcgagttgaatgaaggcgagcagccatgtcagga 534
Query: 642 gc 643
||
Sbjct: 535 gc 536
Score = 69.9 bits (35), Expect = 2e-010
Identities = 98/119 (82%)
Strand = Plus / Plus
Query: 861 tcatgaagggaacccattgtagcgaactcataagcaaggacgcggagtgtcccatcagca 920
||||| ||||| |||||||| || |||||||| ||||| || ||||| | || || ||
Sbjct: 754 tcatgtagggatcccattgttgcaaactcatatgcaagcactcggagatttccttctaca 813
Query: 921 cagtaaccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctg 979
||||| || |||||||| ||||||||||||| ||||| |||||| ||||| || |||||
Sbjct: 814 cagtacccgagcaactccacaacattttcattcttcaaccttgagaccatggaaacctg 872
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 273 ggttgtagcgccttgacaacaatgctcatgttcggccggaa 313
||||| || |||||||||||||||||||| || ||||||||
Sbjct: 166 ggttggagagccttgacaacaatgctcatatttggccggaa 206
>gb|AJ767677.1|AJ767677 AJ767677 Populus euphratica leaf adult Populus euphratica cDNA
clone P0000100009A05F1, mRNA sequence
Length = 668
Score = 83.8 bits (42), Expect = 1e-014
Identities = 192/242 (79%)
Strand = Plus / Minus
Query: 402 acacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgc 461
||||| ||| |||| |||||||| || |||||||| |||||||| || |||||||||||
Sbjct: 637 acacattgtttaactttgtcttcactcagtcttggagtagcccaagtaacaagactctgt 578
Query: 462 tgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaagaaca 521
|| || | ||||| || || || |||||||||||||| || | ||||| || |||||
Sbjct: 577 tgcccacgtggcatggtgtgatcaacaggtttcctcccggtaagaagctctaggagaact 518
Query: 522 accccaaaactatatacatcactcttagagctgagttgcccagtcatcgcatactcaggc 581
|| |||||||| || || || ||||| | | ||| |||||||| |||||||||||
Sbjct: 517 actccaaaactgtaaacgtcgctcttctgtgtcaattgtccagtcattgcatactcagga 458
Query: 582 gcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctgccatgtcagga 641
||||| || ||||| ||||| | ||| | |||||| ||||| || || ||||||||||||
Sbjct: 457 gcatgataaccgaaggttcctaaaactcgagttgaatgaaggcgggcagccatgtcagga 398
Query: 642 gc 643
||
Sbjct: 397 gc 396
Score = 61.9 bits (31), Expect = 5e-008
Identities = 97/119 (81%)
Strand = Plus / Minus
Query: 861 tcatgaagggaacccattgtagcgaactcataagcaaggacgcggagtgtcccatcagca 920
||||| ||||| |||||||| || |||||||| ||||| || ||||| | || || ||
Sbjct: 178 tcatgtagggatcccattgttgcaaactcatatgcaagcactcggagatttccttctaca 119
Query: 921 cagtaaccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctg 979
||||| || || ||||| ||||||||||||| ||||| |||||| ||||| || |||||
Sbjct: 118 cagtacccgagtaactccacaacattttcattcttcaaccttgagaccatggaaacctg 60
>gb|CV251514.1|CV251514 WS0117.B21_E22 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0117_E22 3', mRNA sequence
Length = 655
Score = 83.8 bits (42), Expect = 1e-014
Identities = 129/158 (81%)
Strand = Plus / Plus
Query: 561 ccagtcatcgcatactcaggcgcatggtatccgaatgttccgagaaccctagttgagtga 620
|||||||| ||||| || || ||||| || || |||||||| ||||| | ||| || |||
Sbjct: 422 ccagtcattgcatattcgggagcatgataaccaaatgttcccagaactcgagtggaatga 481
Query: 621 agccgagctgccatgtcaggagcttggttcgacagatcaaagtcagcgatcttagctaca 680
|| || |||||||| ||||||||||| || |||| ||||||||| || || || || |||
Sbjct: 482 agacgtgctgccatatcaggagcttgatttgacaaatcaaagtcggcaatttttgcaaca 541
Query: 681 tcgtcatcgaaaagaaggacgttgctagacttgatgtc 718
|| |||||||||| ||| || ||||| ||||| |||||
Sbjct: 542 tcatcatcgaaaataagaacattgctggacttaatgtc 579
Score = 73.8 bits (37), Expect = 1e-011
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 261 gcattcagcaggggttgtagcgccttgacaacaatgctcatgttcggccggaagtccgct 320
||||| |||||||| || || || || || |||||||||||||| |||||||| || |||
Sbjct: 236 gcatttagcaggggctggagggctttaaccacaatgctcatgtttggccggaaatcagct 295
Query: 321 tcgtattgaacacacaaggcggcgacagc 349
|||||||| ||||||||||| || |||||
Sbjct: 296 tcgtattgcacacacaaggcagcaacagc 324
>gb|DT489644.1|DT489644 WS02542.B21_M16 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02542_M16 3', mRNA sequence
Length = 810
Score = 83.8 bits (42), Expect = 1e-014
Identities = 189/238 (79%)
Strand = Plus / Plus
Query: 402 acacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgc 461
||||| ||| |||| |||||||| || |||||||| |||||||| || |||||||||||
Sbjct: 572 acacattgtttaactttgtcttcactcagtcttggagtagcccaagtaacaagactctgt 631
Query: 462 tgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaagaaca 521
|| || | ||||| || || || ||||||||||||||||| | ||||| || |||||
Sbjct: 632 tgcccacgtggcatggtgtgatcaacaggtttcctcccagtaagaagctctaggagaact 691
Query: 522 accccaaaactatatacatcactcttagagctgagttgcccagtcatcgcatactcaggc 581
|| |||||||| || || || ||||| | | ||| |||||||| |||||||||||
Sbjct: 692 actccaaaactgtaaacgtcgctcttctgtgtcaattgtccagtcattgcatactcagga 751
Query: 582 gcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctgccatgtcag 639
||||| || || || ||||| | ||| | |||||| ||||| ||||| ||||||||||
Sbjct: 752 gcatgataaccaaaggttcctaaaactcgagttgaatgaaggcgagcagccatgtcag 809
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 273 ggttgtagcgccttgacaacaatgctcatgttcggccggaa 313
||||| || |||||||||||||||||||| || ||||||||
Sbjct: 443 ggttggagagccttgacaacaatgctcatatttggccggaa 483
>gb|CV231925.1|CV231925 WS0195.B21_P13 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0195_P13 3', mRNA sequence
Length = 384
Score = 73.8 bits (37), Expect = 1e-011
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 261 gcattcagcaggggttgtagcgccttgacaacaatgctcatgttcggccggaagtccgct 320
||||| |||||||| || || || || || |||||||||||||| |||||||| || |||
Sbjct: 241 gcatttagcaggggctggagagctttaaccacaatgctcatgtttggccggaaatcagct 300
Query: 321 tcgtattgaacacacaaggcggcgacagc 349
|||||||| ||||||||||| || |||||
Sbjct: 301 tcgtattgcacacacaaggcagcaacagc 329
>gb|CV232680.1|CV232680 WS0198.B21_F11 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0198_F11 3', mRNA sequence
Length = 384
Score = 73.8 bits (37), Expect = 1e-011
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 261 gcattcagcaggggttgtagcgccttgacaacaatgctcatgttcggccggaagtccgct 320
||||| |||||||| || || || || || |||||||||||||| |||||||| || |||
Sbjct: 241 gcatttagcaggggctggagagctttaaccacaatgctcatgtttggccggaaatcagct 300
Query: 321 tcgtattgaacacacaaggcggcgacagc 349
|||||||| ||||||||||| || |||||
Sbjct: 301 tcgtattgcacacacaaggcagcaacagc 329
>gb|CK105764.1|CK105764 UA37BPG11.5pR Populus dormant cambium cDNA library Populus tremula
cDNA clone UA37BPG11 5', mRNA sequence
Length = 321
Score = 69.9 bits (35), Expect = 2e-010
Identities = 53/59 (89%)
Strand = Plus / Minus
Query: 291 acaatgctcatgttcggccggaagtccgcttcgtattgaacacacaaggcggcgacagc 349
|||||||||||||| |||||||| || ||||||||||| ||||||||||| || |||||
Sbjct: 283 acaatgctcatgtttggccggaaatcagcttcgtattgcacacacaaggcagcaacagc 225
Score = 65.9 bits (33), Expect = 3e-009
Identities = 123/149 (82%), Gaps = 3/149 (2%)
Strand = Plus / Minus
Query: 399 tcaacacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactc 458
||||||||||| |||||||||| || | ||| ||||||||||||| |||| | ||||
Sbjct: 174 tcaacacactgcttaaccttgtcctca-tgagttttggtgtagcccatgtcata-gact- 118
Query: 459 tgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaaga 518
|||||||| | ||| || || || || ||||||||||||||||||| | |||||| ||
Sbjct: 117 tgctgtccacgtggtaaagtgtgatcaacaggtttcctcccagtcagaaactcaagcagg 58
Query: 519 acaaccccaaaactatatacatcactctt 547
||||| |||||||| || |||||||||||
Sbjct: 57 acaacaccaaaactgtacacatcactctt 29
>gb|CN523293.1|CN523293 GQ015M01.B3_K20 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M01_K20 5', mRNA sequence
Length = 816
Score = 69.9 bits (35), Expect = 2e-010
Identities = 98/119 (82%)
Strand = Plus / Minus
Query: 861 tcatgaagggaacccattgtagcgaactcataagcaaggacgcggagtgtcccatcagca 920
||||| ||||| |||||||| || |||||||| ||||| || ||||| | || || ||
Sbjct: 668 tcatgtagggatcccattgttgcaaactcatatgcaagcactcggagatttccttctaca 609
Query: 921 cagtaaccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctg 979
||||| || |||||||| ||||||||||||| ||||| |||||| ||||| || |||||
Sbjct: 608 cagtacccgagcaactccacaacattttcattcttcaaccttgagaccatggaaacctg 550
>gb|CV244302.1|CV244302 WS0254.B21_E15 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0254_E15 3', mRNA sequence
Length = 733
Score = 69.9 bits (35), Expect = 2e-010
Identities = 107/131 (81%)
Strand = Plus / Minus
Query: 402 acacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgc 461
||||| ||| |||| |||||||| || |||||||| |||||||| || |||||||||||
Sbjct: 205 acacattgtttaactttgtcttcactcagtcttggagtagcccaagtaacaagactctgt 146
Query: 462 tgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaagaaca 521
|| || | ||||| || || || ||||||||||||||||| | ||||| || |||||
Sbjct: 145 tgcccacgtggcatggtgtgatcaacaggtttcctcccagtaagaagctctaggagaact 86
Query: 522 accccaaaact 532
|| ||||||||
Sbjct: 85 actccaaaact 75
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 273 ggttgtagcgccttgacaacaatgctcatgttcggccggaa 313
||||| || |||||||||||||||||||| || ||||||||
Sbjct: 334 ggttggagagccttgacaacaatgctcatatttggccggaa 294
>gb|DT488013.1|DT488013 WS02535.B21_E10 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02535_E10 3', mRNA sequence
Length = 694
Score = 69.9 bits (35), Expect = 2e-010
Identities = 107/131 (81%)
Strand = Plus / Plus
Query: 402 acacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgc 461
||||| ||| |||| |||||||| || |||||||| |||||||| || |||||||||||
Sbjct: 549 acacattgtttaactttgtcttcactcagtcttggagtagcccaagtaacaagactctgt 608
Query: 462 tgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaagaaca 521
|| || | ||||| || || || ||||||||||||||||| | ||||| || |||||
Sbjct: 609 tgcccacgtggcatggtgtgatcaacaggtttcctcccagtaagaagctctaggagaact 668
Query: 522 accccaaaact 532
|| ||||||||
Sbjct: 669 actccaaaact 679
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 273 ggttgtagcgccttgacaacaatgctcatgttcggccggaa 313
||||| || |||||||||||||||||||| || ||||||||
Sbjct: 420 ggttggagagccttgacaacaatgctcatatttggccggaa 460
>gb|CV258775.1|CV258775 WS0201.B21_H18 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0201_H18 3', mRNA sequence
Length = 429
Score = 67.9 bits (34), Expect = 8e-010
Identities = 106/130 (81%)
Strand = Plus / Plus
Query: 402 acacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgc 461
||||| ||| |||| |||||||| || |||||||| |||||||| || |||||||||||
Sbjct: 300 acacattgtttaactttgtcttcactcagtcttggagtagcccaagtaacaagactctgt 359
Query: 462 tgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaagaaca 521
|| || | ||||| || || || ||||||||||||||||| | ||||| || |||||
Sbjct: 360 tgcccacgtggcatggtgtgatcaacaggtttcctcccagtaagaagctctaggagaact 419
Query: 522 accccaaaac 531
|| |||||||
Sbjct: 420 actccaaaac 429
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 273 ggttgtagcgccttgacaacaatgctcatgttcggccggaa 313
||||| || |||||||||||||||||||| || ||||||||
Sbjct: 171 ggttggagagccttgacaacaatgctcatatttggccggaa 211
>gb|CV262321.1|CV262321 WS02019.B21_D21 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02019_D21 3', mRNA sequence
Length = 429
Score = 67.9 bits (34), Expect = 8e-010
Identities = 106/130 (81%)
Strand = Plus / Plus
Query: 402 acacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgc 461
||||| ||| |||| |||||||| || |||||||| |||||||| || |||||||||||
Sbjct: 300 acacattgtttaactttgtcttcactcagtcttggagtagcccaagtaacaagactctgt 359
Query: 462 tgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaagaaca 521
|| || | ||||| || || || ||||||||||||||||| | ||||| || |||||
Sbjct: 360 tgcccacgtggcatggtgtgatcaacaggtttcctcccagtaagaagctctaggagaact 419
Query: 522 accccaaaac 531
|| |||||||
Sbjct: 420 actccaaaac 429
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 273 ggttgtagcgccttgacaacaatgctcatgttcggccggaa 313
||||| || |||||||||||||||||||| || ||||||||
Sbjct: 171 ggttggagagccttgacaacaatgctcatatttggccggaa 211
>gb|DT525036.1|DT525036 WS02044.C21_E07 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02044_E07 3', mRNA sequence
Length = 429
Score = 67.9 bits (34), Expect = 8e-010
Identities = 106/130 (81%)
Strand = Plus / Plus
Query: 402 acacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgc 461
||||| ||| |||| |||||||| || |||||||| |||||||| || |||||||||||
Sbjct: 300 acacattgtttaactttgtcttcactcagtcttggagtagcccaagtaacaagactctgt 359
Query: 462 tgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaagaaca 521
|| || | ||||| || || || ||||||||||||||||| | ||||| || |||||
Sbjct: 360 tgcccacgtggcatggtgtgatcaacaggtttcctcccagtaagaagctctaggagaact 419
Query: 522 accccaaaac 531
|| |||||||
Sbjct: 420 actccaaaac 429
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 273 ggttgtagcgccttgacaacaatgctcatgttcggccggaa 313
||||| || |||||||||||||||||||| || ||||||||
Sbjct: 171 ggttggagagccttgacaacaatgctcatatttggccggaa 211
>gb|CN517317.1|CN517317 GQ0093.B3_N13 GQ009 Populus trichocarpa x Populus deltoides cDNA
clone GQ0093_N13 5', mRNA sequence
Length = 517
Score = 65.9 bits (33), Expect = 3e-009
Identities = 84/101 (83%)
Strand = Plus / Minus
Query: 618 tgaagccgagctgccatgtcaggagcttggttcgacagatcaaagtcagcgatcttagct 677
||||| || |||||||| ||||||||||| || |||| ||||||||| || || || ||
Sbjct: 434 tgaagacgtgctgccatatcaggagcttgatttgacaaatcaaagtcggcaatttttgca 375
Query: 678 acatcgtcatcgaaaagaaggacgttgctagacttgatgtc 718
||||| |||||||||| ||| || ||||| ||||| |||||
Sbjct: 374 acatcatcatcgaaaataagaacattgctggacttaatgtc 334
Score = 58.0 bits (29), Expect = 8e-007
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 816 ggaccgggttgagcccctttaacccctttccttccatgaagcatatcatgaag 868
||||| ||||| || |||||||| |||||||| |||||||| |||||||||||
Sbjct: 236 ggaccaggttgtgctcctttaacacctttcctcccatgaagaatatcatgaag 184
Score = 50.1 bits (25), Expect = 2e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 944 attttcatgcttcagccttgacaccatagacacctgggccaagaa 988
|||||||||||||| |||||| ||||| || |||||||| |||||
Sbjct: 108 attttcatgcttcaaccttgaaaccatggagacctgggctaagaa 64
>gb|CN522037.1|CN522037 GQ0121.B3_I20 GQ012 Populus trichocarpa x Populus deltoides cDNA
clone GQ0121_I20 5', mRNA sequence
Length = 278
Score = 65.9 bits (33), Expect = 3e-009
Identities = 99/121 (81%)
Strand = Plus / Minus
Query: 861 tcatgaagggaacccattgtagcgaactcataagcaaggacgcggagtgtcccatcagca 920
||||| ||||| |||||||| ||||||||||| ||||| || || || | || || ||
Sbjct: 179 tcatggagggatcccattgttgcgaactcatatgcaagcactcgaagatttccttctaca 120
Query: 921 cagtaaccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgg 980
|||||||| || ||||| |||| ||||||||| |||| ||||||||||| || ||||||
Sbjct: 119 cagtaaccgagtaactccacaaaattttcatgtttcaatcttgacaccatggaaacctgg 60
Query: 981 g 981
|
Sbjct: 59 g 59
>gb|CV265894.1|CV265894 WS02028.B21_I18 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02028_I18 3', mRNA sequence
Length = 381
Score = 65.9 bits (33), Expect = 3e-009
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 261 gcattcagcaggggttgtagcgccttgacaacaatgctcatgttcggccggaagtccgct 320
||||| |||||||| || || || || || ||||| |||||||| |||||||| || |||
Sbjct: 216 gcatttagcaggggctggagggctttaaccacaatactcatgtttggccggaaatcagct 275
Query: 321 tcgtattgaacacacaaggcggcgacagc 349
|||||||| ||||||||||| || |||||
Sbjct: 276 tcgtattgcacacacaaggcagcaacagc 304
>gb|CX657984.1|CX657984 PO01007G09 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01007G09 5', mRNA sequence
Length = 683
Score = 61.9 bits (31), Expect = 5e-008
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 498 ccagtcaacagctcaagaagaacaaccccaaaactatatacatcactcttagagctgagt 557
|||||||||| ||||| |||||||||||||| ||||| ||||||||||| || ||||
Sbjct: 98 ccagtcaacatttcaagtagaacaaccccaaagctatagacatcactcttggatgtgaga 39
Query: 558 tgcccagtcatcgcatactcagg 580
|| || ||||| ||||||||||
Sbjct: 38 tgacctgtcattacatactcagg 16
>gb|BP933971.1|BP933971 BP933971 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-058_M01.r 3', mRNA sequence
Length = 579
Score = 61.9 bits (31), Expect = 5e-008
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 264 ttcagcaggggttgtagcgccttgacaacaatgctcatgttcggccggaagtccgcttc 322
||||| || ||||| ||||||||||||||||||||||| || |||||||| || |||||
Sbjct: 487 ttcagaagtggttggagcgccttgacaacaatgctcatatttggccggaactcagcttc 545
>gb|CK097189.1|CK097189 UB42BPH03.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB42BPH03 3', mRNA sequence
Length = 431
Score = 58.0 bits (29), Expect = 8e-007
Identities = 92/113 (81%)
Strand = Plus / Plus
Query: 264 ttcagcaggggttgtagcgccttgacaacaatgctcatgttcggccggaagtccgcttcg 323
||||| || ||||| || ||||||||||| |||||||| || |||||||| || | |||
Sbjct: 272 ttcagaagtggttggagagccttgacaacgatgctcatatttggccggaactcagattca 331
Query: 324 tattgaacacacaaggcggcgacagccgcaaacttcgcaacagctttaggagg 376
|| || ||||| ||||| || ||||| || ||||| ||||| ||||||||||
Sbjct: 332 tactgcacacataaggctgccacagctgccaacttggcaactcctttaggagg 384
>gb|CX653816.1|CX653816 PO02007F04 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02007F04 5', mRNA sequence
Length = 520
Score = 58.0 bits (29), Expect = 8e-007
Identities = 98/121 (80%)
Strand = Plus / Minus
Query: 861 tcatgaagggaacccattgtagcgaactcataagcaaggacgcggagtgtcccatcagca 920
||||| ||||| |||||||| ||||| ||||| ||||| || || || | || || ||
Sbjct: 236 tcatggagggatcccattgttgcgaattcatatgcaagcactcgaagatttccttctaca 177
Query: 921 cagtaaccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgg 980
|||||||| || ||||| |||| ||||||||| |||| ||||||||||| || ||||||
Sbjct: 176 cagtaaccgagtaactccacaaaattttcatgtttcaatcttgacaccatggaaacctgg 117
Query: 981 g 981
|
Sbjct: 116 g 116
>gb|CX655265.1|CX655265 PO02032C07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02032C07 5', mRNA sequence
Length = 575
Score = 58.0 bits (29), Expect = 8e-007
Identities = 98/121 (80%)
Strand = Plus / Minus
Query: 861 tcatgaagggaacccattgtagcgaactcataagcaaggacgcggagtgtcccatcagca 920
||||| ||||| |||||||| ||||| ||||| ||||| || || || | || || ||
Sbjct: 236 tcatggagggatcccattgttgcgaattcatatgcaagcactcgaagatttccttctaca 177
Query: 921 cagtaaccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgg 980
|||||||| || ||||| |||| ||||||||| |||| ||||||||||| || ||||||
Sbjct: 176 cagtaaccgagtaactccacaaaattttcatgtttcaatcttgacaccatggaaacctgg 117
Query: 981 g 981
|
Sbjct: 116 g 116
Score = 52.0 bits (26), Expect = 5e-005
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 562 cagtcatcgcatactcaggcgcatggtatccgaatgttccgagaaccctagttgagtgaa 621
||||||| ||||||||||| ||||| || || || ||||| | ||| | ||| || ||||
Sbjct: 535 cagtcattgcatactcaggagcatgataaccaaaggttcctaaaactcgagtagaatgaa 476
Query: 622 gccgagctgccatgtcaggagc 643
| ||||| ||||||||||||||
Sbjct: 475 ggcgagcagccatgtcaggagc 454
>gb|DT474321.1|DT474321 WS01231.BR_I17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01231_I17 5', mRNA sequence
Length = 747
Score = 58.0 bits (29), Expect = 8e-007
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 919 cacagtaaccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacct 978
||||||| || |||||||| ||||||||||||| ||||| |||||| ||||| || ||||
Sbjct: 717 cacagtacccgagcaactccacaacattttcattcttcaaccttgagaccatggaaacct 658
Query: 979 g 979
|
Sbjct: 657 g 657
>gb|BU892887.1|BU892887 P070G01 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 605
Score = 56.0 bits (28), Expect = 3e-006
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 516 agaacaaccccaaaactatatacatcactctt 547
|||||||| |||||||||||||||||||||||
Sbjct: 309 agaacaacaccaaaactatatacatcactctt 278
>gb|CF231067.1|CF231067 PtaC0016H5H0515 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 319
Score = 56.0 bits (28), Expect = 3e-006
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 261 gcattcagcaggggttgtagcgccttgacaacaatgctcatgttcggccggaagtccgct 320
||||| |||||||| || || || || || |||||||||||||| |||||||| || |||
Sbjct: 69 gcatttagcaggggctgaagggctttaaccacaatgctcatgtttggccggaaatcagct 10
Query: 321 tcgtattg 328
||||||||
Sbjct: 9 tcgtattg 2
>gb|CV227313.1|CV227313 WS0166.B21_N04 PT-DX-A-7 Populus trichocarpa cDNA clone WS0166_N04
3', mRNA sequence
Length = 423
Score = 56.0 bits (28), Expect = 3e-006
Identities = 94/116 (81%)
Strand = Plus / Plus
Query: 264 ttcagcaggggttgtagcgccttgacaacaatgctcatgttcggccggaagtccgcttcg 323
||||| || ||||| || |||||||||||||||||||| || |||||||| || |||||
Sbjct: 290 ttcagaagtggttggagagccttgacaacaatgctcatatttggccggaactcagcttca 349
Query: 324 tattgaacacacaaggcggcgacagccgcaaacttcgcaacagctttaggaggata 379
|| || ||||| || || || ||||| || | ||| ||||| ||||||| |||||
Sbjct: 350 tactgcacacataacgctgccacagctgccagcttggcaactcctttagggggata 405
>gb|CV227501.1|CV227501 WS0167.B21_F20 PT-DX-A-7 Populus trichocarpa cDNA clone WS0167_F20
3', mRNA sequence
Length = 825
Score = 56.0 bits (28), Expect = 3e-006
Identities = 94/116 (81%)
Strand = Plus / Plus
Query: 264 ttcagcaggggttgtagcgccttgacaacaatgctcatgttcggccggaagtccgcttcg 323
||||| || ||||| || |||||||||||||||||||| || |||||||| || |||||
Sbjct: 336 ttcagaagtggttggagagccttgacaacaatgctcatatttggccggaactcagcttca 395
Query: 324 tattgaacacacaaggcggcgacagccgcaaacttcgcaacagctttaggaggata 379
|| || ||||| || || || ||||| || | ||| ||||| ||||||| |||||
Sbjct: 396 tactgcacacataacgctgccacagctgccagcttggcaactcctttagggggata 451
>gb|DN486879.1|DN486879 P070G01.3pR Populus petioles cDNA library Populus tremula cDNA
clone P070G01 3', mRNA sequence
Length = 606
Score = 56.0 bits (28), Expect = 3e-006
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 516 agaacaaccccaaaactatatacatcactctt 547
|||||||| |||||||||||||||||||||||
Sbjct: 464 agaacaacaccaaaactatatacatcactctt 495
>gb|CK094925.1|CK094925 I061P45.3pR Populus senescing leaves cDNA library Populus tremula
cDNA clone I061P45 3', mRNA sequence
Length = 668
Score = 54.0 bits (27), Expect = 1e-005
Identities = 201/259 (77%)
Strand = Plus / Plus
Query: 435 ggtgtagcccaggtcacaagactctgctgtccccttggcaatgtatggtcgacaggtttc 494
||||| ||||| |||||||| ||||||||||| | ||| | |||||| || ||||||||
Sbjct: 310 ggtgtggcccatgtcacaaggctctgctgtcctcgtggtagtgtatgatctacaggttta 369
Query: 495 ctcccagtcaacagctcaagaagaacaaccccaaaactatatacatcactcttagagctg 554
| ||||| || || || || || | || ||||| || || | || |||||| || ||
Sbjct: 370 cggccagttaagagttccagcaggatgacaccaaagctgtaaatattactctttgaacta 429
Query: 555 agttgcccagtcatcgcatactcaggcgcatggtatccgaatgttccgagaaccctagtt 614
|| || |||||||| | |||||| || ||||| || ||||| |||| ||||| | |||
Sbjct: 430 agctgtccagtcattgtatactctggagcatgataaccgaagtttccaagaacacgagtg 489
Query: 615 gagtgaagccgagctgccatgtcaggagcttggttcgacagatcaaagtcagcgatctta 674
|| | ||| || || ||||||||||| ||||| || |||| ||| || ||||| ||||||
Sbjct: 490 gaataaagacgtgcagccatgtcaggggcttgatttgacaaatcgaaatcagcaatctta 549
Query: 675 gctacatcgtcatcgaaaa 693
|| ||||| ||||| ||||
Sbjct: 550 gcaacatcatcatcaaaaa 568
>gb|DN495965.1|DN495965 P024F04.5pR Populus petioles cDNA library Populus tremula cDNA
clone P024F04 5', mRNA sequence
Length = 864
Score = 54.0 bits (27), Expect = 1e-005
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 919 cacagtaaccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacct 978
|||||||||| || ||||| |||| ||||||||| |||| ||||||||||| || ||||
Sbjct: 581 cacagtaaccgagtaactccacaaaattttcatgtttcaatcttgacaccatggaaacct 522
Query: 979 ggg 981
|||
Sbjct: 521 ggg 519
>gb|AJ777714.1|AJ777714 AJ777714 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400034A12F1, mRNA sequence
Length = 498
Score = 52.0 bits (26), Expect = 5e-005
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 831 cctttaacccctttccttccatgaagcatatcatgaag 868
|||||||| |||||||| |||||||| |||||||||||
Sbjct: 350 cctttaacacctttcctcccatgaagaatatcatgaag 313
Score = 50.1 bits (25), Expect = 2e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 944 attttcatgcttcagccttgacaccatagacacctgggccaagaa 988
|||||||||||||| |||||| ||||| || |||||||| |||||
Sbjct: 237 attttcatgcttcaaccttgaaaccatggagacctgggctaagaa 193
>gb|DV465858.1|DV465858 MTUNUL1.P44.A10 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 896
Score = 52.0 bits (26), Expect = 5e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 498 ccagtcaacagctcaagaagaacaaccccaaaactatatacatcactctt 547
|||||||||| ||||| | |||||||||||| ||||| |||||||||||
Sbjct: 892 ccagtcaacatttcaagtaaaacaaccccaaagctatagacatcactctt 843
>gb|BI129134.1|BI129134 G086P40Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 494
Score = 50.1 bits (25), Expect = 2e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 944 attttcatgcttcagccttgacaccatagacacctgggccaagaa 988
|||||||||||||| |||||| ||||| || |||||||| |||||
Sbjct: 487 attttcatgcttcaaccttgaaaccatggagacctgggctaagaa 443
>gb|BU889088.1|BU889088 P016E10 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 594
Score = 50.1 bits (25), Expect = 2e-004
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 944 attttcatgcttcagccttgacaccatagacacctgggccaagaa 988
|||||||||||||| |||||| ||||| || |||||||| |||||
Sbjct: 502 attttcatgcttcaaccttgaaaccatggagacctgggctaagaa 458
>gb|CA926665.1|CA926665 MTU6CR.P17.G03 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 431
Score = 50.1 bits (25), Expect = 2e-004
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 944 attttcatgcttcagccttgacaccatagacacctgggccaagaa 988
|||||||||||||| |||||| ||||| || |||||||| |||||
Sbjct: 4 attttcatgcttcaaccttgaaaccatggagacctgggctaagaa 48
>gb|CK106998.1|CK106998 UB42BPH03.5pR Populus active cambium cDNA library Populus tremula
cDNA clone UB42BPH03 5', mRNA sequence
Length = 236
Score = 50.1 bits (25), Expect = 2e-004
Identities = 92/113 (81%), Gaps = 1/113 (0%)
Strand = Plus / Minus
Query: 264 ttcagcaggggttgtagcgccttgacaacaatgctcatgttcggccggaagtccgcttcg 323
||||| || ||||| || ||||||||||| |||||||| || |||||||| || | |||
Sbjct: 145 ttcagaagtggttggagagccttgacaacgatgctcatatttggccggaactcagattca 86
Query: 324 tattgaacacacaaggcggcgacagccgcaaacttcgcaacagctttaggagg 376
|| || ||||| ||||| || ||||| || ||||| ||||| ||||||||||
Sbjct: 85 tactgcacacataaggctgccacagctgccaactt-gcaactcctttaggagg 34
>gb|CN524284.1|CN524284 GQ015M15.T3_G10 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M15_G10 5', mRNA sequence
Length = 848
Score = 50.1 bits (25), Expect = 2e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 507 agctcaagaagaacaaccccaaaactatatacatcac 543
||||||||||||||||| |||||||| || |||||||
Sbjct: 342 agctcaagaagaacaacaccaaaactgtaaacatcac 306
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 119,767
Number of Sequences: 369679
Number of extensions: 119767
Number of successful extensions: 33232
Number of sequences better than 0.5: 81
Number of HSP's better than 0.5 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 33083
Number of HSP's gapped (non-prelim): 139
length of query: 1135
length of database: 203,408,664
effective HSP length: 19
effective length of query: 1116
effective length of database: 196,384,763
effective search space: 219165395508
effective search space used: 219165395508
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)