BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2437779.2.1
(3727 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY055724.2| Populus tremuloides cellulose synthase (CesA... 474 e-131
gb|CN549808.1|CN549808 GQ0241.B3_H11 GQ024 Populus trichoca... 327 2e-087
gb|BP924070.1|BP924070 BP924070 full-length enriched poplar... 315 7e-084
gb|CN524693.1|CN524693 GQ015M08.T3_H02 GQ015 Populus tricho... 313 3e-083
gb|DT509821.1|DT509821 WS02424.BR_N10 PTxD-ICC-N-A-14 Popul... 297 2e-078
gb|CA931952.1|CA931952 MTU4TA.P25.A10 Aspen apex cDNA Libra... 291 1e-076
gb|CX169886.1|CX169886 G10_69-94_14.ab1 leaf inoculated wit... 281 9e-074
gb|CA927446.1|CA927446 MTU6CR.P9.B04 Aspen root cDNA Librar... 268 1e-069
gb|CA932078.1|CA932078 MTU4TA.P26.F03 Aspen apex cDNA Libra... 268 1e-069
gb|CA930801.1|CA930801 MTU2TA.P10.D08 Aspen apex cDNA Libra... 248 1e-063
gb|CF229283.1|CF229283 PtaXM0023E4E0410 Poplar cDNA library... 190 3e-046
gb|AJ778476.1|AJ778476 AJ778476 Populus euphratica cambium ... 182 6e-044
gb|CV130875.1|CV130875 X9SP07b02 Populus stem seasonal libr... 182 6e-044
gb|AY573572.1| Populus tremula x Populus tremuloides cellul... 176 4e-042
gb|DT473511.1|DT473511 WS01229.BR_N17 PT-GT-FL-A-3 Populus ... 172 6e-041
gb|BU823358.1|BU823358 UB51DPD11 Populus tremula cambium cD... 170 2e-040
gb|AJ779945.1|AJ779945 AJ779945 Populus euphratica root 3-6... 170 2e-040
gb|CF234438.1|CF234438 Ptajxojxo2F10F1012 Poplar cDNA libra... 163 6e-038
gb|AJ777820.1|AJ777820 AJ777820 Populus euphratica root 3-6... 163 6e-038
gb|AJ779545.1|AJ779545 AJ779545 Populus euphratica root 3-6... 159 9e-037
gb|AY162181.1| Populus tremuloides cellulose synthase (CesA... 159 9e-037
gb|AY330165.1| Populus tremuloides CesA5A-like mRNA, partia... 149 9e-034
gb|AJ778214.1|AJ778214 AJ778214 Populus euphratica root 3-6... 137 3e-030
gb|DT476519.1|DT476519 WS01229.B21_N17 PT-GT-FL-A-3 Populus... 133 5e-029
gb|AY095297.1| Populus tremuloides cellulose synthase (CesA... 133 5e-029
gb|AY162180.1| Populus tremuloides cellulose synthase (CesA... 133 5e-029
gb|CF232388.1|CF232388 PtaJXO0009H2H0216 Poplar cDNA librar... 131 2e-028
gb|AJ774508.1|AJ774508 AJ774508 Populus euphratica shoot 3-... 129 8e-028
gb|CA925680.1|CA925680 MTU7TL.P4.E11 Aspen leaf cDNA Librar... 127 3e-027
gb|CK100621.1|CK100621 C057P32.5pR Populus strain T89 leave... 127 3e-027
gb|CF235713.1|CF235713 PtaJXT0026B7B0703 Poplar cDNA librar... 123 5e-026
gb|CK320732.1|CK320732 X9SP01b11 Populus stem seasonal libr... 123 5e-026
gb|AY196961.1| Populus tremuloides cellulose synthase 6 (Ce... 123 5e-026
gb|CF234212.1|CF234212 PtaJXO3H12H1216 Poplar cDNA library ... 121 2e-025
gb|CK107258.1|CK107258 UB51DPD11.5pR Populus active cambium... 121 2e-025
gb|CF235321.1|CF235321 PtaJXT0021D9D0907 Poplar cDNA librar... 119 8e-025
gb|AJ775294.1|AJ775294 AJ775294 Populus euphratica shoot 3-... 117 3e-024
gb|AJ775532.1|AJ775532 AJ775532 Populus euphratica shoot 3-... 117 3e-024
gb|DT500468.1|DT500468 PX0015.BR_I21 PT-X-FL-A-1 Populus tr... 115 1e-023
gb|CV252351.1|CV252351 PX0011.B21_G15 PT-X-FL-A-1 Populus t... 113 5e-023
gb|AJ778410.1|AJ778410 AJ778410 Populus euphratica cambium ... 111 2e-022
gb|CB239511.1|CB239511 RSH12F10 two-month-old roots from cl... 109 8e-022
gb|CV244615.1|CV244615 WS0255.B21_C09 PT-MB-N-A-15 Populus ... 107 3e-021
gb|DT489371.1|DT489371 WS02542.B21_A18 PT-MB-N-A-15 Populus... 107 3e-021
gb|BI071413.1|BI071413 C057P32U Populus strain T89 leaves P... 105 1e-020
gb|BI128217.1|BI128217 G072P74Y Populus cambium cDNA librar... 105 1e-020
gb|CK102305.1|CK102305 G072P74.5pR Populus tension wood cDN... 105 1e-020
gb|BU897746.1|BU897746 X067G02 Populus wood cDNA library Po... 103 5e-020
gb|CF237222.1|CF237222 Ptajxtjxt3E10E1010 Poplar cDNA libra... 103 5e-020
gb|CN550567.1|CN550567 GQ0241.B3_I15 GQ024 Populus trichoca... 103 5e-020
gb|DT487943.1|DT487943 WS02535.B21_B11 PT-MB-N-A-15 Populus... 103 5e-020
gb|CN518195.1|CN518195 GQ0092.B3_P04 GQ009 Populus trichoca... 101 2e-019
gb|DT493063.1|DT493063 WS02553.C21_E11 PT-MB-N-A-15 Populus... 100 8e-019
gb|AJ771596.1|AJ771596 AJ771596 Populus euphratica root 3-6... 98 3e-018
gb|AF081534.1|AF081534 Populus x canescens cellulose syntha... 98 3e-018
gb|CN520281.1|CN520281 GQ0105.B3_A14 GQ010 Populus trichoca... 96 1e-017
gb|AF527387.1| Populus tremuloides xylem-specific cellulose... 96 1e-017
gb|AY573571.1| Populus tremula x Populus tremuloides cellul... 96 1e-017
gb|AY573575.1| Populus tremula x Populus tremuloides cellul... 96 1e-017
gb|CK318831.1|CK318831 X9P03h01 Populus stem seasonal libra... 90 7e-016
gb|AF417485.1| Populus tremuloides cellulose synthase (CesA... 88 3e-015
gb|AY573574.1| Populus tremula x Populus tremuloides cellul... 88 3e-015
gb|CN519879.1|CN519879 GQ0108.B3_I06 GQ010 Populus trichoca... 86 1e-014
gb|DV466097.1|DV466097 MTUNUL1.P47.C03 NUL Populus fremonti... 86 1e-014
gb|CA926289.1|CA926289 MTU6CR.P13.C05 Aspen root cDNA Libra... 84 4e-014
gb|CF236447.1|CF236447 PtaJXT2H2H0216 Poplar cDNA library f... 84 4e-014
gb|DT500162.1|DT500162 PX0011.BR_G15 PT-X-FL-A-1 Populus tr... 84 4e-014
gb|AF072131.1|AF072131 Populus tremuloides secondary xylem ... 82 2e-013
gb|DQ004570.1| Populus tomentosa cellulose synthase (cesa1)... 82 2e-013
gb|CK102299.1|CK102299 G072P58.5pR Populus tension wood cDN... 80 7e-013
gb|CV228438.1|CV228438 WS01910.B21_B15 PT-DX-N-A-10 Populus... 80 7e-013
gb|AY330166.1| Populus tremuloides CesA7A-like mRNA, partia... 80 7e-013
gb|BU895617.1|BU895617 X028D07 Populus wood cDNA library Po... 76 1e-011
gb|AY573573.2| Populus tremula x Populus tremuloides cellul... 76 1e-011
gb|DV465848.1|DV465848 MTUNUL1.P43.H11 NUL Populus fremonti... 74 4e-011
gb|DV466748.1|DV466748 MTUNUL1.P9.G02 NUL Populus fremontii... 74 4e-011
gb|BU897991.1|BU897991 X073A11 Populus wood cDNA library Po... 72 2e-010
gb|CK087778.1|CK087778 A020P56.3pR Hybrid aspen plasmid lib... 72 2e-010
gb|AI163338.1|AI163338 A040P09U Hybrid aspen plasmid librar... 70 7e-010
gb|BI131187.1|BI131187 G116P69Y Populus cambium cDNA librar... 70 7e-010
gb|CA934196.1|CA934196 MTU3TS.P4.D08 Aspen stem cDNA Librar... 70 7e-010
gb|CF229078.1|CF229078 PtaXM0021A1A0101 Poplar cDNA library... 70 7e-010
gb|BP927588.1|BP927588 BP927588 full-length enriched poplar... 70 7e-010
gb|BI130668.1|BI130668 G109P08Y Populus cambium cDNA librar... 66 1e-008
gb|CF227502.1|CF227502 PtaD6G2G0214 Poplar cDNA library fro... 66 1e-008
gb|DT493580.1|DT493580 WS0111.BR_M17 PT-P-FL-A-2 Populus tr... 66 1e-008
gb|BI127228.1|BI127228 G057P27Y Populus cambium cDNA librar... 64 4e-008
gb|BU815407.1|BU815407 N041C05 Populus bark cDNA library Po... 64 4e-008
gb|CF235639.1|CF235639 PtaJXT0025C12C1206 Poplar cDNA libra... 64 4e-008
gb|CN522480.1|CN522480 GQ0123.B3_H17 GQ012 Populus trichoca... 64 4e-008
gb|DN495393.1|DN495393 N041C05.5pR Populus bark cDNA librar... 64 4e-008
gb|BI128968.1|BI128968 G084P20Y Populus cambium cDNA librar... 62 2e-007
gb|CV283069.1|CV283069 WS0186.B21_F15 PTxD-IL-N-A-9 Populus... 62 2e-007
gb|DT470299.1|DT470299 WS01920.C21_H07 PT-DX-N-A-10 Populus... 62 2e-007
gb|CF227669.1|CF227669 PtaXM0003A12A1202 Poplar cDNA librar... 60 6e-007
gb|CK092703.1|CK092703 G092P25.3pR Populus tension wood cDN... 60 6e-007
gb|CK102806.1|CK102806 G092P25.5pR Populus tension wood cDN... 60 6e-007
gb|BI138973.1|BI138973 F120P33Y Populus flower cDNA library... 58 3e-006
gb|CK091716.1|CK091716 F120P33.3pR Populus flower cDNA libr... 58 3e-006
gb|CK101805.1|CK101805 F120P33.5pR Populus flower cDNA libr... 58 3e-006
gb|CK117417.1|CK117417 B050P68 Hybrid aspen plasmid library... 58 3e-006
gb|DT475055.1|DT475055 WS0125.BR_N16 PT-GT-FL-A-3 Populus t... 58 3e-006
gb|DT475135.1|DT475135 WS0126.BR_C03 PT-GT-FL-A-3 Populus t... 58 3e-006
gb|BI129778.1|BI129778 G095P49Y Populus cambium cDNA librar... 56 1e-005
gb|CK097446.1|CK097446 UB51DPD11.3pR Populus active cambium... 56 1e-005
gb|AJ778868.1|AJ778868 AJ778868 Populus euphratica cambium ... 56 1e-005
gb|CV262834.1|CV262834 WS0202.B21_K05 PTxN-IB-N-A-11 Populu... 56 1e-005
gb|CV275712.1|CV275712 WS0177.B21_F22 PTxD-NR-A-8 Populus t... 56 1e-005
gb|CV282433.1|CV282433 WS0184.B21_J19 PTxD-IL-N-A-9 Populus... 56 1e-005
gb|BP923622.1|BP923622 BP923622 full-length enriched poplar... 56 1e-005
gb|CF237106.1|CF237106 Ptajxtjxt2B1B0103 Poplar cDNA librar... 54 4e-005
gb|CK088138.1|CK088138 A040P09.3pR Hybrid aspen plasmid lib... 54 4e-005
gb|CK116718.1|CK116718 B016P26 Hybrid aspen plasmid library... 54 4e-005
gb|CN523759.1|CN523759 GQ015M04.T3_A09 GQ015 Populus tricho... 54 4e-005
gb|CK317759.1|CK317759 B9P01d09 Populus stem seasonal libra... 54 4e-005
gb|CV227790.1|CV227790 WS0168.B21_D13 PT-DX-A-7 Populus tri... 52 2e-004
gb|CV242542.1|CV242542 WS02515.B21_F16 PT-MB-N-A-15 Populus... 52 2e-004
gb|CV273266.1|CV273266 WS01710.B21_E12 PTxD-NR-A-8 Populus ... 52 2e-004
gb|CV275252.1|CV275252 WS0175.B21_N18 PTxD-NR-A-8 Populus t... 52 2e-004
gb|AY162184.1| Populus tremuloides cellulose synthase-like ... 52 2e-004
gb|BI129892.1|BI129892 G097P01Y Populus cambium cDNA librar... 50 6e-004
gb|BU830997.1|BU830997 T015G10 Populus apical shoot cDNA li... 50 6e-004
gb|CA822704.1|CA822704 R12D03 two-month-old roots from clon... 50 6e-004
gb|CF233149.1|CF233149 PtaJXO0019H4H0416 Poplar cDNA librar... 50 6e-004
gb|CK102947.1|CK102947 G097P01.5pR Populus tension wood cDN... 50 6e-004
gb|CV252662.1|CV252662 PX0015.B21_I21 PT-X-FL-A-1 Populus t... 50 6e-004
gb|AI162302.1|AI162302 A015P47U Hybrid aspen plasmid librar... 48 0.002
gb|CF216282.1|CF216282 PT1104 Hybrid aspen xylem up-regulat... 48 0.002
gb|CK107777.1|CK107777 G057P27 Populus tension wood cDNA li... 48 0.002
gb|CN549469.1|CN549469 GQ0241.B3_B20 GQ024 Populus trichoca... 48 0.002
gb|BI138150.1|BI138150 F099P76Y Populus flower cDNA library... 46 0.010
gb|BU879588.1|BU879588 V062A11 Populus flower cDNA library ... 46 0.010
gb|CK101560.1|CK101560 F099P76.5pR Populus flower cDNA libr... 46 0.010
gb|CN524029.1|CN524029 GQ015M07.T3_H06 GQ015 Populus tricho... 46 0.010
gb|CN524680.1|CN524680 GQ015M13.T3_D10 GQ015 Populus tricho... 46 0.010
gb|CK318639.1|CK318639 X9P01f01 Populus stem seasonal libra... 46 0.010
gb|CV225435.1|CV225435 WS0161.B21_G07 PT-DX-A-7 Populus tri... 46 0.010
gb|CV225888.1|CV225888 WS0162.B21_K19 PT-DX-A-7 Populus tri... 46 0.010
gb|CV226017.1|CV226017 WS0163.B21_A20 PT-DX-A-7 Populus tri... 46 0.010
gb|CV226195.1|CV226195 WS0163.B21_J02 PT-DX-A-7 Populus tri... 46 0.010
gb|CV227633.1|CV227633 WS0167.B21_M03 PT-DX-A-7 Populus tri... 46 0.010
gb|CV232087.1|CV232087 WS0196.B21_I06 PT-DX-N-A-10 Populus ... 46 0.010
gb|CV234604.1|CV234604 WS01215.B21.1_I11 PT-GT-FL-A-3 Popul... 46 0.010
gb|DN502245.1|DN502245 V062A11.5pR Populus male catkins cDN... 46 0.010
gb|BU817734.1|BU817734 UA20CPD09 Populus tremula cambium cD... 44 0.038
gb|BU836690.1|BU836690 T089G02 Populus apical shoot cDNA li... 44 0.038
gb|CF216196.1|CF216196 PT1004 Hybrid aspen xylem up-regulat... 44 0.038
gb|CF232837.1|CF232837 PtaJXO0016D5D0507 Poplar cDNA librar... 44 0.038
gb|CF233490.1|CF233490 PtaJXO0024C12C1206 Poplar cDNA libra... 44 0.038
gb|CV229552.1|CV229552 WS01913.B21_K14 PT-DX-N-A-10 Populus... 44 0.038
gb|CV268371.1|CV268371 WS0205.B21_E18 PTxN-IB-N-A-11 Populu... 44 0.038
gb|CV273968.1|CV273968 WS01712.B21_M13 PTxD-NR-A-8 Populus ... 44 0.038
gb|BP923939.1|BP923939 BP923939 full-length enriched poplar... 44 0.038
gb|BP928099.1|BP928099 BP928099 full-length enriched poplar... 44 0.038
gb|AI163409.1|AI163409 A041P33U Hybrid aspen plasmid librar... 42 0.15
gb|BI132304.1|BI132304 G135P11Y Populus cambium cDNA librar... 42 0.15
gb|BU896705.1|BU896705 X044E08 Populus wood cDNA library Po... 42 0.15
gb|CF216199.1|CF216199 PT1009 Hybrid aspen xylem up-regulat... 42 0.15
gb|CF232642.1|CF232642 PtaJXO0013H5H0515 Poplar cDNA librar... 42 0.15
gb|CK319336.1|CK319336 X9P09f03 Populus stem seasonal libra... 42 0.15
gb|CV268970.1|CV268970 WS0206.B21_P09 PTxN-IB-N-A-11 Populu... 42 0.15
>gb|AY055724.2| Populus tremuloides cellulose synthase (CesA5) mRNA, complete cds
Length = 3532
Score = 474 bits (239), Expect = e-131
Identities = 650/787 (82%)
Strand = Plus / Minus
Query: 1541 ggaggctcataaccatataaggccgttctgttaaacacacaaccagttcccacataaact 1600
||||| ||||||||||| || ||||| |||||||| ||||| ||||| |||||||| ||
Sbjct: 2163 ggaggttcataaccatacaatgccgtcctgttaaagacacatccagtacccacatagaca 2104
Query: 1601 ggcccttgaatgccatcaagacctctcaagttaatatcgaaaaacacagtgttcctgttt 1660
|| |||||||| ||||| ||||| |||||||| ||||| || || ||||| || | ||
Sbjct: 2103 ggtccttgaataccatccagacccctcaagtttatatcaaagaatacagtattgcgattg 2044
Query: 1661 gcatatcggtcattcctatcaataccatcaaacctctgaggaaattggacataacagaca 1720
|||||||| |||||||| ||||| |||||||| || || ||||| || ||||| ||||||
Sbjct: 2043 gcatatcgatcattcctgtcaatgccatcaaatctttgtggaaactgaacatagcagaca 1984
Query: 1721 ttccttcctaggtttgggtccataaggaagcacatagcttctcgaagagccttgctatta 1780
| | || ||||| || ||| | | ||| ||||||||||||| | |||||||||| |
Sbjct: 1983 tgtttcccaaggttaggatccttcatgaaacacatagcttctctcaaagccttgctaatg 1924
Query: 1781 ttgatgtagtggtcacagtcaagattcaacatgtattgcccattagtaaggacagctgat 1840
|| |||||||| ||||| ||||||||||||| | | |||||||||| || || ||||||
Sbjct: 1923 tttatgtagtgatcacaatcaagattcaacaagaaaggcccattagttagcacggctgat 1864
Query: 1841 acacgaacaagtgcattcatggcaccagccttcttgtgatgttggaatccaggacgtttt 1900
||||||||||||| ||||||||||||||| |||||||| || ||||| |||||||| |||
Sbjct: 1863 acacgaacaagtgaattcatggcaccagctttcttgtggtgctggaagccaggacgcttt 1804
Query: 1901 tcacgagacacataaaccaaacgaggaagttcattgccttcaacgtcaagccctccactg 1960
|||||||| |||||||| || || ||||| ||||| || ||| ||||||||||||||
Sbjct: 1803 tcacgagaaacataaactaaccgcggaagctcattaccatcagaatcaagccctccactt 1744
Query: 1961 tgacccaggaaaacctgaatcattccaggatggtccctagtattgttcccaggccaaggt 2020
|| |||| |||||||||||||||||| |||||||| || || || || |||||||| ||
Sbjct: 1743 tggcccaagaaaacctgaatcattcctggatggtctctggtgttatttccaggccatggg 1684
Query: 2021 gtaccatcttgcatgatccatccctcctcgggaactttttgtgcattggctacaagacca 2080
|| ||||||||||| |||||||| || || || || ||||| || ||||| ||||| |||
Sbjct: 1683 gtcccatcttgcataatccatccttcttcaggcaccttttgcgccttggcaacaagccca 1624
Query: 2081 ttgatacgaactttgaattcttcatattctctcttcatggcccggcgttctttcacaaat 2140
|||||||||| ||| ||||||||||||||||||||||| || | || ||||| |||||
Sbjct: 1623 ttgatacgaattttaaattcttcatattctctcttcatagctctacggtctttgacaaaa 1564
Query: 2141 gaagtttgaactttgtctttcaagtaatcaattttctgagcaaagtaccattccggagcc 2200
|| | || ||||| || |||||||| ||||| || || |||||||||||||| ||||||
Sbjct: 1563 gatggctgcactttatccttcaagtagtcaatcttttgtgcaaagtaccattctggagcc 1504
Query: 2201 ctaggctctatgttgtacttcttacagaacggaacccattttctagcaaactctgaagtt 2260
| |||||| ||| |||||||||| ||||| || |||||||| || | ||||||||||||
Sbjct: 1503 cgaggctcaatgctgtacttcttgcagaagggcacccatttcctggaaaactctgaagtc 1444
Query: 2261 tcagagagagcatcaaaagtcagcatagcagctccatcatccgaaacatagcaagatacc 2320
||||| | ||| ||||| |||| ||| ||||| |||||||| || |||||||| || ||
Sbjct: 1443 tcagacaaagcttcaaatgtcaacattgcagcaccatcatcagagacatagcatgagact 1384
Query: 2321 ttgtcaa 2327
|||||||
Sbjct: 1383 ttgtcaa 1377
Score = 335 bits (169), Expect = 7e-090
Identities = 397/473 (83%)
Strand = Plus / Minus
Query: 902 gtgagtggataaattgttgtgttgatataagcaaatctctccaggaatttaagccgacct 961
|||| ||||||||| || ||||| | ||| ||||| ||||| || |||| |||| |||
Sbjct: 2814 gtgattggataaatggtagtgtttacatatgcaaacctctcgagccatttcagcctacca 2755
Query: 962 ccatagccataccatatgggacaatgcctgctgaaaagaatttcaatggaaccaagagcc 1021
|||||||||||||| || |||||||||| |||| ||||||||||| ||||| ||||||
Sbjct: 2754 ccatagccataccaaattggacaatgccgactgagaagaatttcaacagaacccagagcc 2695
Query: 1022 caccgaagcacttgattcaaacgatccgaaaggttgataggagcagatcccttgaaagct 1081
|| ||||||||||| |||| |||||| ||||| || ||||||||||| || || || |||
Sbjct: 2694 catcgaagcacttggttcagacgatcagaaagattaataggagcagaccctttaaaggct 2635
Query: 1082 ggtcgcttaggcatgcagtagattgatcgccagcctcgagcatgcatcttgaatccggtg 1141
|| ||||| ||||| || || ||||| ||||| || || ||||||||||| || || ||
Sbjct: 2634 gggcgcttgggcatacaataaattgaccgccaaccccgggcatgcatcttaaacccagta 2575
Query: 1142 agaatgtcttctgtaacagaaccatagatccacccaatctcagttccccagtcagttttg 1201
||||| |||||||||||||||||||||||||| |||||||||| |||||| || ||||||
Sbjct: 2574 agaatatcttctgtaacagaaccatagatccatccaatctcagatccccaatctgttttg 2515
Query: 1202 tcctcatagccacagctgatgacatgaatagcttctttcagaagagactctggagttgca 1261
|||||||| ||||| || |||||||||||||||||||| ||||||| ||||| ||||||
Sbjct: 2514 tcctcatacccacaactaatgacatgaatagcttctttaagaagagtttctggtgttgca 2455
Query: 1262 gattgtggaacaccgccatattccatcagagtagaggctacaaaaacactggactggcca 1321
|| || |||||||| |||| ||||| || || || || ||||||||| |||||||||
Sbjct: 2454 gactgaggaacaccaccattctccataagtgtggaagcaacaaaaacagctgactggcca 2395
Query: 1322 aatctcttctccaagctcatttgagacataatcagcgatttctcatcatcaaa 1374
|| |||||||||| ||||||||||||||| | || || ||||||||||||||
Sbjct: 2394 aacctcttctccaggctcatttgagacatgagaagtgacttctcatcatcaaa 2342
Score = 153 bits (77), Expect = 6e-035
Identities = 392/497 (78%)
Strand = Plus / Minus
Query: 311 acccacatcagggaaaagatcgacgcaaggaggatagcccagacaacgacaatggtcggc 370
||||||| || ||||||||| || |||||||| |||| ||| || || |||||||| ||
Sbjct: 3405 acccacaacaaggaaaagattgaagcaaggagaatagaccacacgacaacaatggtgggt 3346
Query: 371 gtgcggttctgcttccccatgaggcccttgaggaaggggtacaggtggacaatcacccag 430
|| |||||||| ||||| | || || ||||| || || || ||||| |||||||||
Sbjct: 3345 gtccggttctggcgacccatcaaaccttttaggaaaggatagagatggacgatcacccag 3286
Query: 431 aacgcaaagaagagcttcccgaaaagaggtccccatgactggtaaccgctattgattgcg 490
|| || ||||| ||||| || || || || ||||||||||| ||||| || ||||||||
Sbjct: 3285 aaagcgaagaaaagcttgccaaagagtggaccccatgactgataaccactgttgattgca 3226
Query: 491 taggaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtggttggtgggatc 550
| ||| || || || || || || |||| ||| | ||| | | ||| ||||| |||||
Sbjct: 3225 tgggatatcccggcaacaacacccaccaagttaacgatgaggagagttgttggcgggata 3166
Query: 551 agaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttcgtcagtggcc 610
|| || |||||||| ||||||| ||| || || ||| ||||||| || ||||| | |||
Sbjct: 3165 agtagagttgtccatttgaacaagtatagttcagcagaatcaccgtcctcgtctgatgcc 3106
Query: 611 ttagaggtgacagtgaagctcgtgtcgataccagcaagcaccttcaggagaccctggaag 670
|| || || ||||||||| | ||||| || |||||||| || || || | || |||||
Sbjct: 3105 ttggacgtaacagtgaagttggtgtcaatgccagcaagtactttgagcaagccttggaaa 3046
Query: 671 acggcaaataaatgcgcagaaataccaccaatgacccagaactgctcgttcctccaccat 730
|| ||||| | ||| || |||| |||||| |||||||| ||||| || |||||||||||
Sbjct: 3045 acagcaaaaagatgggctgaaacaccaccgatgacccaaaactgttcattcctccaccac 2986
Query: 731 tcatcaatgccaacaccactccacctcatctcaaggataccagtggcaaagattgagata 790
|||||||| ||||||||||||||||||||||| | |||||| || |||||||| || | |
Sbjct: 2985 tcatcaatcccaacaccactccacctcatctccaagataccggttgcaaagatggaaaga 2926
Query: 791 aagagcgatataaacca 807
||||| || ||||||||
Sbjct: 2925 aagagagaaataaacca 2909
Score = 50.1 bits (25), Expect = 6e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 2702 agaggttgccgagtttcatcattcagtaa 2730
||||||||||||| |||||||||||||||
Sbjct: 1002 agaggttgccgagcttcatcattcagtaa 974
>gb|CN549808.1|CN549808 GQ0241.B3_H11 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0241_H11 5', mRNA sequence
Length = 840
Score = 327 bits (165), Expect = 2e-087
Identities = 351/413 (84%)
Strand = Plus / Minus
Query: 962 ccatagccataccatatgggacaatgcctgctgaaaagaatttcaatggaaccaagagcc 1021
|||||||||||||| || |||||||||| |||| ||||||||||| ||||| ||||||
Sbjct: 713 ccatagccataccaaattggacaatgccgactgagaagaatttcaacagaacccagagcc 654
Query: 1022 caccgaagcacttgattcaaacgatccgaaaggttgataggagcagatcccttgaaagct 1081
|| ||||||||||| |||| |||||| ||||| || ||||||||||| || || || |||
Sbjct: 653 catcgaagcacttggttcagacgatcagaaagattaataggagcagaccctttaaaggct 594
Query: 1082 ggtcgcttaggcatgcagtagattgatcgccagcctcgagcatgcatcttgaatccggtg 1141
|| ||||| ||||| || || ||||| ||||| || || ||||||||||| || || ||
Sbjct: 593 gggcgcttgggcatacaataaattgaccgccaaccacgggcatgcatcttaaaaccagta 534
Query: 1142 agaatgtcttctgtaacagaaccatagatccacccaatctcagttccccagtcagttttg 1201
||||| |||||||||||||||||||||||||| |||||||||| |||||| || ||||||
Sbjct: 533 agaatatcttctgtaacagaaccatagatccatccaatctcagatccccaatctgttttg 474
Query: 1202 tcctcatagccacagctgatgacatgaatagcttctttcagaagagactctggagttgca 1261
|||||||| ||||| || |||||||||||||||||||| ||||||| ||||| ||||||
Sbjct: 473 tcctcatacccacaactaatgacatgaatagcttctttaagaagagtttctggtgttgca 414
Query: 1262 gattgtggaacaccgccatattccatcagagtagaggctacaaaaacactggactggcca 1321
|| || ||||||||||||| ||||| || || || || ||||||||| |||||||||
Sbjct: 413 gactgaggaacaccgccattctccataagtgtggaagcaacaaaaacagctgactggcca 354
Query: 1322 aatctcttctccaagctcatttgagacataatcagcgatttctcatcatcaaa 1374
|| |||||||||| ||||||||||||||| | || || ||||||||||||||
Sbjct: 353 aacctcttctccaggctcatttgagacatgagaagtgacttctcatcatcaaa 301
Score = 83.8 bits (42), Expect = 4e-014
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 1541 ggaggctcataaccatataaggccgttctgttaaacacacaaccagttcccacataaact 1600
||||| ||||||||||| || ||||| |||||||| ||||| ||||| |||||||| ||
Sbjct: 122 ggaggttcataaccatacaatgccgtcctgttaaagacacatccagtacccacatagaca 63
Query: 1601 ggcccttgaatgccatcaagacctctcaagttaatatc 1638
|| |||||||| ||||| ||||| |||||||| |||||
Sbjct: 62 ggtccttgaataccatccagacccctcaagtttatatc 25
>gb|BP924070.1|BP924070 BP924070 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-027_K15.f 5', mRNA sequence
Length = 535
Score = 315 bits (159), Expect = 7e-084
Identities = 345/407 (84%)
Strand = Plus / Minus
Query: 968 ccataccatatgggacaatgcctgctgaaaagaatttcaatggaaccaagagcccaccga 1027
|||||||| || |||||||||| |||| ||||||||||| ||||| |||||||| |||
Sbjct: 535 ccataccaaattggacaatgccgactgagaagaatttcaacagaacctagagcccatcga 476
Query: 1028 agcacttgattcaaacgatccgaaaggttgataggagcagatcccttgaaagctggtcgc 1087
|||||||| |||| |||||| ||||| || ||||||||||| || || || ||||| ||
Sbjct: 475 agcacttggttcagacgatcagaaagattaataggagcagaccctttaaaggctgggcgt 416
Query: 1088 ttaggcatgcagtagattgatcgccagcctcgagcatgcatcttgaatccggtgagaatg 1147
|| ||||||||||| ||||| ||||| || || ||||||||||||||||| || |||||
Sbjct: 415 ttgggcatgcagtaaattgaccgccaaccacgggcatgcatcttgaatccagtaagaata 356
Query: 1148 tcttctgtaacagaaccatagatccacccaatctcagttccccagtcagttttgtcctca 1207
|||||||||||||||||||||||||| || ||||||| |||||| || |||||||||||
Sbjct: 355 tcttctgtaacagaaccatagatccatcctatctcagatccccaatctgttttgtcctcg 296
Query: 1208 tagccacagctgatgacatgaatagcttctttcagaagagactctggagttgcagattgt 1267
|| ||||||||||||||||||||||| ||||| ||||||| |||||||||||||| ||
Sbjct: 295 taaccacagctgatgacatgaatagcctctttaagaagagtttctggagttgcagactga 236
Query: 1268 ggaacaccgccatattccatcagagtagaggctacaaaaacactggactggccaaatctc 1327
||||||||||||| ||||| || || || || ||||||||| ||||||||||| |||
Sbjct: 235 ggaacaccgccattctccatgagtgtggaagcaacaaaaacagctgactggccaaacctc 176
Query: 1328 ttctccaagctcatttgagacataatcagcgatttctcatcatcaaa 1374
||||||| |||| | || ||||| | || || ||||||||||||||
Sbjct: 175 ttctccaggctcgtctgtgacatgagaagtgacttctcatcatcaaa 129
>gb|CN524693.1|CN524693 GQ015M08.T3_H02 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M08_H02 5', mRNA sequence
Length = 770
Score = 313 bits (158), Expect = 3e-083
Identities = 421/509 (82%)
Strand = Plus / Minus
Query: 899 gatgtgagtggataaattgttgtgttgatataagcaaatctctccaggaatttaagccga 958
||||||| ||||||||| || ||||||||||||||||||||||| || |||| ||||
Sbjct: 663 gatgtgattggataaatggtggtgttgatataagcaaatctctcgagccattttagcctt 604
Query: 959 cctccatagccataccatatgggacaatgcctgctgaaaagaatttcaatggaaccaaga 1018
|| | |||||||||||||||||| || || | |||| ||||||||||| |||||| |
Sbjct: 603 ccacnatagccataccatatggggcagtgacgactgagaagaatttcaacggaacccaag 544
Query: 1019 gcccaccgaagcacttgattcaaacgatccgaaaggttgataggagcagatcccttgaaa 1078
|||||||||||||||||||| | |||||| ||||| || || |||||||||||||| ||
Sbjct: 543 gcccaccgaagcacttgatttagacgatcagaaagattaatgggagcagatcccttaaag 484
Query: 1079 gctggtcgcttaggcatgcagtagattgatcgccagcctcgagcatgcatcttgaatccg 1138
|| || ||||| |||||||| |||||||||| ||| || ||||||||||||||||||||
Sbjct: 483 gcaggacgctttggcatgcaatagattgatctccacccacgagcatgcatcttgaatcct 424
Query: 1139 gtgagaatgtcttctgtaacagaaccatagatccacccaatctcagttccccagtcagtt 1198
|| || || ||||| |||||||||||||| ||||| || || ||| |||||||||| |
Sbjct: 423 gtaaggatatcttccgtaacagaaccatatatccatcctatttcacttccccagtctgac 364
Query: 1199 ttgtcctcatagccacagctgatgacatgaatagcttctttcagaagagactctggagtt 1258
||||| || || ||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 363 ttgtcttcgtatccacagctgatgacatgaatagcttctttgagaagagactctggggtg 304
Query: 1259 gcagattgtggaacaccgccatattccatcagagtagaggctacaaaaacactggactgg 1318
|| || | ||||||||| || | ||||| || || || || ||||| ||| | || |||
Sbjct: 303 gcggactctggaacaccaccgttctccataagggtggaagcaacaaacacagttgattgg 244
Query: 1319 ccaaatctcttctccaagctcatttgagacataatcagcgatttctcatcatcaaactga 1378
|||||||| ||||| | ||||||||||||| | || ||||| |||||||| || |
Sbjct: 243 ccaaatcttttctcaagtgtcatttgagacatgagcaatgatttttcatcatcgaatcca 184
Query: 1379 gaaccttcaatcccttcctctatatcttc 1407
| |||||||| |||||| |||||||||||
Sbjct: 183 gtaccttcaaccccttcttctatatcttc 155
>gb|DT509821.1|DT509821 WS02424.BR_N10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02424_N10 5', mRNA sequence
Length = 723
Score = 297 bits (150), Expect = 2e-078
Identities = 513/634 (80%)
Strand = Plus / Minus
Query: 539 gttggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttct 598
||||||||||| || | || ||||| |||||||| || ||||||| ||||||||| |||
Sbjct: 635 gttggtgggataagtaaagtggtccatttgaacatatatagctcggtaaaatcaccatct 576
Query: 599 tcgtcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcaccttcagg 658
|| |||| || || || ||||| || || | || || || |||||||| || |||||
Sbjct: 575 tcatcagatgcttttgaagtgactgtaaaatttgtatctattccagcaaggactttcagc 516
Query: 659 agaccctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaactgctcg 718
|| || |||||||| ||||| | ||| || || | ||| ||||| ||||||||||| ||
Sbjct: 515 aggccttggaagacagcaaagagatgagctgacacacctccaataacccagaactgttca 456
Query: 719 ttcctccaccattcatcaatgccaacaccactccacctcatctcaaggataccagtggca 778
||||||||||||||||| || |||||||||||||| ||||| || | |||||||| |||
Sbjct: 455 ttcctccaccattcatcgatcccaacaccactccatctcatttccaaaataccagttgca 396
Query: 779 aagattgagataaagagcgatataaaccaaacactctctaggttactaatctttgggatg 838
|||||||| | |||||| ||||| ||||| | ||| | | ||||||||||| ||| ||
Sbjct: 395 aagattgaaagaaagagggatatgaaccagatactggcaatgttactaatctgtggaata 336
Query: 839 atgaacttcccagtgagaagacaaactgctggcaatatgcagtacaggaggagcgggatt 898
|||||||| || || ||||| || || || |||||| | || || || || || ||
Sbjct: 335 atgaactttcccgtaagaaggcacacggcaggcaatgtacaataggcaagaagaggaatg 276
Query: 899 gatgtgagtggataaattgttgtgttgatataagcaaatctctccaggaatttaagccga 958
||||||| ||||||||| || ||||||||||||||||||||||| || |||| ||||
Sbjct: 275 gatgtgattggataaatggtggtgttgatataagcaaatctctcgagccattttagcctt 216
Query: 959 cctccatagccataccatatgggacaatgcctgctgaaaagaatttcaatggaaccaaga 1018
|| | |||||||||||||||||| || || | |||| ||||||||||| |||||| |
Sbjct: 215 ccactatagccataccatatggggcagtgacgactgagaagaatttcaacggaacccaag 156
Query: 1019 gcccaccgaagcacttgattcaaacgatccgaaaggttgataggagcagatcccttgaaa 1078
|||||||||||||||||||| | |||||| ||||| || || |||||||||||||| ||
Sbjct: 155 gcccaccgaagcacttgatttagacgatcagaaagattaatgggagcagatcccttaaag 96
Query: 1079 gctggtcgcttaggcatgcagtagattgatcgccagcctcgagcatgcatcttgaatccg 1138
|| || ||||| |||||||| |||||||||| ||| || ||||||||||||||||||||
Sbjct: 95 gcaggacgcttcggcatgcaatagattgatctccaaccacgagcatgcatcttgaatcct 36
Query: 1139 gtgagaatgtcttctgtaacagaaccatagatcc 1172
|| || || ||||| |||||||||||||| ||||
Sbjct: 35 gtaaggatatcttccgtaacagaaccatatatcc 2
>gb|CA931952.1|CA931952 MTU4TA.P25.A10 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 629
Score = 291 bits (147), Expect = 1e-076
Identities = 413/502 (82%)
Strand = Plus / Plus
Query: 1541 ggaggctcataaccatataaggccgttctgttaaacacacaaccagttcccacataaact 1600
||||| ||||||||||| || ||||| || ||||| ||||| ||||| ||| |||| ||
Sbjct: 128 ggaggttcataaccatacaatgccgtcctattaaagacacatccagtgcccgcatagaca 187
Query: 1601 ggcccttgaatgccatcaagacctctcaagttaatatcgaaaaacacagtgttcctgttt 1660
|| |||||||| ||||| | ||| | |||||| ||||| || |||||||| || | ||
Sbjct: 188 ggtccttgaataccatccaaaccccccaagtttatatcaaagaacacagtattgcgattg 247
Query: 1661 gcatatcggtcattcctatcaataccatcaaacctctgaggaaattggacataacagaca 1720
|||||||| |||||| | ||||| |||||||| || || |||||||| ||||| ||||||
Sbjct: 248 gcatatcgatcattcttgtcaatgccatcaaatctttgtggaaattgaacatagcagaca 307
Query: 1721 ttccttcctaggtttgggtccataaggaagcacatagcttctcgaagagccttgctatta 1780
| |||| || || || ||||| | ||| ||||||||||||| | ||||||||||||
Sbjct: 308 tgttttccaagattaggatccatcatgaaacacatagcttctctcaaagccttgctattg 367
Query: 1781 ttgatgtagtggtcacagtcaagattcaacatgtattgcccattagtaaggacagctgat 1840
|| | |||||| ||||||||||||||||||| | | |||||||||| || |||||||||
Sbjct: 368 tttacgtagtgatcacagtcaagattcaacaagaaaggcccattagttagcacagctgat 427
Query: 1841 acacgaacaagtgcattcatggcaccagccttcttgtgatgttggaatccaggacgtttt 1900
||||||||||||||||||||||||||||| |||||||| || ||||| || ||||| |||
Sbjct: 428 acacgaacaagtgcattcatggcaccagctttcttgtggtgctggaagcctggacgcttt 487
Query: 1901 tcacgagacacataaaccaaacgaggaagttcattgccttcaacgtcaagccctccactg 1960
|||||||| |||||||| || || || || ||||| || ||| ||||||||||||||
Sbjct: 488 tcacgagaaacataaactaaccgtggcagctcattaccatcagtatcaagccctccactt 547
Query: 1961 tgacccaggaaaacctgaatcattccaggatggtccctagtattgttcccaggccaaggt 2020
|| || | |||||||||||||||||| |||||||| || || || || ||||||| ||
Sbjct: 548 tgccctaagaaaacctgaatcattcctggatggtctctggtgttatttncaggccatggg 607
Query: 2021 gtaccatcttgcatgatccatc 2042
|| ||||||||||| |||||||
Sbjct: 608 gtcccatcttgcataatccatc 629
>gb|CX169886.1|CX169886 G10_69-94_14.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 620
Score = 281 bits (142), Expect = 9e-074
Identities = 376/454 (82%)
Strand = Plus / Minus
Query: 1541 ggaggctcataaccatataaggccgttctgttaaacacacaaccagttcccacataaact 1600
||||| ||||||||||| || ||||| |||||||| ||||| ||||| |||||||| ||
Sbjct: 469 ggaggttcataaccatacaatgccgtcctgttaaagacacatccagtacccacatagaca 410
Query: 1601 ggcccttgaatgccatcaagacctctcaagttaatatcgaaaaacacagtgttcctgttt 1660
|| |||||||| ||||| ||||| |||||||| ||||| || || ||||| || | ||
Sbjct: 409 ggtccttgaataccatccagacccctcaagtttatatcaaagaatacagtattgcgattg 350
Query: 1661 gcatatcggtcattcctatcaataccatcaaacctctgaggaaattggacataacagaca 1720
|||||||| |||||||| ||||| |||||||| || || ||||| || ||||| ||||||
Sbjct: 349 gcatatcgatcattcctgtcaatgccatcaaatctttgtggaaactgaacatagcagaca 290
Query: 1721 ttccttcctaggtttgggtccataaggaagcacatagcttctcgaagagccttgctatta 1780
| | || ||||| || ||||| | ||| ||||||||||||| | ||||||||||||
Sbjct: 289 tgtttcccaaggttaggatccatcatgaaacacatagcttctctcaaagccttgctattg 230
Query: 1781 ttgatgtagtggtcacagtcaagattcaacatgtattgcccattagtaaggacagctgat 1840
|| ||||| || ||||| ||||||||||||| | | |||||||||| || || ||||||
Sbjct: 229 tttatgtaatgatcacaatcaagattcaacaagaaaggcccattagttagaacggctgat 170
Query: 1841 acacgaacaagtgcattcatggcaccagccttcttgtgatgttggaatccaggacgtttt 1900
||||||||||||| |||||||||||| || |||||||| || ||||| || ||||| |||
Sbjct: 169 acacgaacaagtgaattcatggcaccggctttcttgtggtgctggaagcccggacgcttt 110
Query: 1901 tcacgagacacataaaccaaacgaggaagttcattgccttcaacgtcaagccctccactg 1960
|||||||| |||||||| || || ||||| ||||| || ||| ||||||||||||||
Sbjct: 109 tcacgagaaacataaactaaccgcggaagctcattaccatcagaatcaagccctccactt 50
Query: 1961 tgacccaggaaaacctgaatcattccaggatggt 1994
|| |||| |||||||||||||||||| |||||||
Sbjct: 49 tggcccaagaaaacctgaatcattcctggatggt 16
>gb|CA927446.1|CA927446 MTU6CR.P9.B04 Aspen root cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 648
Score = 268 bits (135), Expect = 1e-069
Identities = 318/379 (83%)
Strand = Plus / Plus
Query: 902 gtgagtggataaattgttgtgttgatataagcaaatctctccaggaatttaagccgacct 961
|||| ||||||||| || ||||| | ||| ||||| ||||| || |||| |||| |||
Sbjct: 251 gtgattggataaatggtagtgtttacatatgcaaacctctcgagctatttcagcctacca 310
Query: 962 ccatagccataccatatgggacaatgcctgctgaaaagaatttcaatggaaccaagagcc 1021
|||||||||||||| || |||||||||| |||| ||||||||||| ||||| ||||||
Sbjct: 311 ccatagccataccaaattggacaatgccgactgagaagaatttcaacagaacccagagcc 370
Query: 1022 caccgaagcacttgattcaaacgatccgaaaggttgataggagcagatcccttgaaagct 1081
|| ||||||||||| |||| |||||| ||||| || ||||||||||| || || || ||
Sbjct: 371 catcgaagcacttggttcagacgatcagaaagattaataggagcagaccctttaaaggcc 430
Query: 1082 ggtcgcttaggcatgcagtagattgatcgccagcctcgagcatgcatcttgaatccggtg 1141
|| ||||| ||||| || || ||||| ||||| || || ||||||||||| || || ||
Sbjct: 431 gggcgcttgggcatacaataaattgaccgccaaccacgggcatgcatcttaaaaccagta 490
Query: 1142 agaatgtcttctgtaacagaaccatagatccacccaatctcagttccccagtcagttttg 1201
||||| |||||||||||||||||||||||||| |||||||||| |||||| || ||||||
Sbjct: 491 agaatatcttctgtaacagaaccatagatccatccaatctcagatccccaatctgttttg 550
Query: 1202 tcctcatagccacagctgatgacatgaatagcttctttcagaagagactctggagttgca 1261
| |||||| ||||| || |||||||||||||||||||| |||||| ||||| ||||||
Sbjct: 551 ttctcatacccacaactaatgacatgaatagcttctttaagaagaagttctggtgttgca 610
Query: 1262 gattgtggaacaccgccat 1280
|| || |||||||||||||
Sbjct: 611 gactgaggaacaccgccat 629
Score = 103 bits (52), Expect = 5e-020
Identities = 100/116 (86%)
Strand = Plus / Plus
Query: 689 gaaataccaccaatgacccagaactgctcgttcctccaccattcatcaatgccaacacca 748
|||| |||||| |||||||| ||||| || ||||||||||| |||||||| |||||||||
Sbjct: 38 gaaacaccaccgatgacccaaaactgttcattcctccaccactcatcaatcccaacacca 97
Query: 749 ctccacctcatctcaaggataccagtggcaaagattgagataaagagcgatataaa 804
|||||||||||||| | |||||| || |||||||| || | |||||| || |||||
Sbjct: 98 ctccacctcatctccaagataccggttgcaaagatggaaagaaagagagaaataaa 153
>gb|CA932078.1|CA932078 MTU4TA.P26.F03 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 596
Score = 268 bits (135), Expect = 1e-069
Identities = 376/455 (82%), Gaps = 1/455 (0%)
Strand = Plus / Plus
Query: 1541 ggaggctcataaccatataaggccgttctgttaaacacacaaccagttcccacataaact 1600
||||| ||||||||||| || ||||| || ||||| ||||| ||||| |||||||| ||
Sbjct: 125 ggaggttcataaccatacaatgccgtcctattaaagacacatccagtgcccacatagaca 184
Query: 1601 ggcccttgaatgccatcaagacctctcaagttaatatcgaaaaacacagtgttcctgttt 1660
|| |||||||| ||||| | ||| | |||||| ||||| || |||||||| || | ||
Sbjct: 185 ggtccttgaataccatccaaaccccccaagtttatatcaaagaacacagtattgcgattg 244
Query: 1661 gcatatcggtcattcctatcaataccatcaaacctctgaggaaattggacataacagaca 1720
|||||||| |||||| | ||||| |||||||| || || |||||||| ||||| ||||||
Sbjct: 245 gcatatcgatcattcttgtcaatgccatcaaatctttgtggaaattgaacatagcagaca 304
Query: 1721 ttccttcctaggtttgggtccataaggaagcacatagcttctcgaagagccttgctatta 1780
| |||| || || || ||||| | ||| ||||||||||||| | ||||||||||||
Sbjct: 305 tgttttccaagattaggatccatcatgaaacacatagcttctctcaaagccttgctattg 364
Query: 1781 ttgatgtagtggtcacagtcaagattcaacatgtattgcccattagtaaggacagctgat 1840
|| | |||||| ||||||||||||||||||| | | |||||||||| || |||||||||
Sbjct: 365 tttacgtagtgatcacagtcaagattcaacaagaaaggcccattagttagcacagctgat 424
Query: 1841 acacgaacaagtgcattcatggcaccagccttcttgtgatgttggaatccaggacgtttt 1900
||||||||||||||||||||||||||||| |||||||| || ||||| || ||||| |||
Sbjct: 425 acacgaacaagtgcattcatggcaccagctttcttgtggtgctggaagcctggacgcttt 484
Query: 1901 tcacgagacacataaaccaaacgaggaagttcattgccttcaacgtcaagccctccactg 1960
|||||||| |||||||| || || || || ||||| || ||| ||||||||||||||
Sbjct: 485 tcacgagaaacataaactaaccgtggcagctcattaccatcagtatcaagccctccactt 544
Query: 1961 tgacccaggaaaacctgaatcattccaggatggtc 1995
|| || | | |||||||||||||||| ||||||||
Sbjct: 545 tgccctaag-aaacctgaatcattcctggatggtc 578
>gb|CA930801.1|CA930801 MTU2TA.P10.D08 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 530
Score = 248 bits (125), Expect = 1e-063
Identities = 314/377 (83%)
Strand = Plus / Plus
Query: 1541 ggaggctcataaccatataaggccgttctgttaaacacacaaccagttcccacataaact 1600
||||| ||||||||||| || ||||| || ||||| ||||| ||||| |||||||| ||
Sbjct: 128 ggaggttcataaccatacaatgccgtcctattaaagacacatccagtgcccacatagaca 187
Query: 1601 ggcccttgaatgccatcaagacctctcaagttaatatcgaaaaacacagtgttcctgttt 1660
|| |||||||| ||||| | ||| |||||||| ||||| || |||||||| || | ||
Sbjct: 188 ggtccttgaataccatccaaacccctcaagtttatatcaaagaacacagtattgcgattg 247
Query: 1661 gcatatcggtcattcctatcaataccatcaaacctctgaggaaattggacataacagaca 1720
|||||||| |||||| | ||||| |||||||| || || |||||||| ||||| ||||||
Sbjct: 248 gcatatcgatcattcttgtcaatgccatcaaatctttgtggaaattgaacatagcagaca 307
Query: 1721 ttccttcctaggtttgggtccataaggaagcacatagcttctcgaagagccttgctatta 1780
| |||| || || || ||||| | ||| ||||||||||||| | ||||| ||||||
Sbjct: 308 tgttttccaagattaggatccatcatgaaacacatagcttctctcaaagcctcgctattg 367
Query: 1781 ttgatgtagtggtcacagtcaagattcaacatgtattgcccattagtaaggacagctgat 1840
|| | |||||| ||||||||||||||||||| | | |||||||||| || |||||||||
Sbjct: 368 tttacgtagtgatcacagtcaagattcaacaagaaaggcccattagttagcacagctgat 427
Query: 1841 acacgaacaagtgcattcatggcaccagccttcttgtgatgttggaatccaggacgtttt 1900
||||||||||||||||||||||||||||| |||||||| || ||||| || ||||| |||
Sbjct: 428 acacgaacaagtgcattcatggcaccagctttcttgtggtgctggaagcctggacgcttt 487
Query: 1901 tcacgagacacataaac 1917
|||||||| ||||||||
Sbjct: 488 tcacgagaaacataaac 504
>gb|CF229283.1|CF229283 PtaXM0023E4E0410 Poplar cDNA library from mature xylem Populus alba x
Populus tremula cDNA 5', mRNA sequence
Length = 642
Score = 190 bits (96), Expect = 3e-046
Identities = 419/527 (79%)
Strand = Plus / Minus
Query: 539 gttggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttct 598
||||| ||||| || || |||||||| ||||||| ||| | || ||| |||||| ||
Sbjct: 528 gttggcgggataagtagagttgtccatttgaacaagtataattcagcagaatcacngtcc 469
Query: 599 tcgtcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcaccttcagg 658
||||| | ||||| || || ||||||||| | |||||||| |||||||| || || ||
Sbjct: 468 tcgtctgatgccttggacgtaacagtgaagttggtgtcgatgccagcaagtactttgagc 409
Query: 659 agaccctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaactgctcg 718
| || ||||| || ||||| | ||| || |||| |||||| |||||||| ||||| ||
Sbjct: 408 aagccttggaaaacagcaaaaagatgggctgaaacaccaccgatgacccaaaactgttca 349
Query: 719 ttcctccaccattcatcaatgccaacaccactccacctcatctcaaggataccagtggca 778
||||||||||| |||||||| ||||||||||||||||||||||| | |||||| || |||
Sbjct: 348 ttcctccaccactcatcaatcccaacaccactccacctcatctccaagataccggttgca 289
Query: 779 aagattgagataaagagcgatataaaccaaacactctctaggttactaatctttgggatg 838
||||| || | |||||| || |||||||| | || | | ||||||||||| ||| ||
Sbjct: 288 aagatggaaagaaagagagaaataaaccatatgcttgcgatgttactaatctgtggaata 229
Query: 839 atgaacttcccagtgagaagacaaactgctggcaatatgcagtacaggaggagcgggatt 898
||||| || | ||||| ||||| | ||||| | | |||| |||||||| || || ||
Sbjct: 228 atgaatttgtctgtgagtagacagatagctggaagtgtgcaatacaggagaagaggaatg 169
Query: 899 gatgtgagtggataaattgttgtgttgatataagcaaatctctccaggaatttaagccga 958
| |||| ||||||||| || ||||| | ||| ||||| ||||| || |||| ||||
Sbjct: 168 gcggtgattggataaatggtagtgtttacatatgcaaacctctcaagccatttcagcctg 109
Query: 959 cctccatagccataccatatgggacaatgcctgctgaaaagaatttcaatggaaccaaga 1018
|| |||||||||||||| || |||||||||| |||| ||||||||||| ||||| |||
Sbjct: 108 ccaccatagccataccaaattggacaatgccgactgagaagaatttcaacagaacccaga 49
Query: 1019 gcccaccgaagcacttgattcaaacgatccgaaaggttgataggagc 1065
||||| ||||||||||| |||| |||||| ||||| || ||||||||
Sbjct: 48 gcccatcgaagcacttggttcagacgatcagaaagattaataggagc 2
>gb|AJ778476.1|AJ778476 AJ778476 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000600001D07F1, mRNA sequence
Length = 677
Score = 182 bits (92), Expect = 6e-044
Identities = 233/280 (83%)
Strand = Plus / Minus
Query: 968 ccataccatatgggacaatgcctgctgaaaagaatttcaatggaaccaagagcccaccga 1027
|||||||||||||| ||||||||||| | | ||| ||||| || || | ||||| |||
Sbjct: 292 ccataccatatggggcaatgcctgctcagtaaaatctcaatagatcccaaggcccatcga 233
Query: 1028 agcacttgattcaaacgatccgaaaggttgataggagcagatcccttgaaagctggtcgc 1087
|| || || ||||||||||| ||||| |||||||||||||| ||||| || || || ||
Sbjct: 232 agaacctggttcaaacgatcagaaagattgataggagcagagcccttaaatgcagggcga 173
Query: 1088 ttaggcatgcagtagattgatcgccagcctcgagcatgcatcttgaatccggtgagaatg 1147
||||||||| ||||||||| ||| || ||||||||||||||||| || || | |||
Sbjct: 172 ggaggcatgcaatagattgatatccaaccacgagcatgcatcttgaacccagtcaaaata 113
Query: 1148 tcttctgtaacagaaccatagatccacccaatctcagttccccagtcagttttgtcctca 1207
|||||||||||||||||||||||||| |||||||| | ||||| ||||| ||||| |||
Sbjct: 112 tcttctgtaacagaaccatagatccatccaatctctttgccccattcagtcttgtcttca 53
Query: 1208 tagccacagctgatgacatgaatagcttctttcagaagag 1247
|| |||||||| || ||||| ||||||||||||| |||||
Sbjct: 52 tatccacagctaataacatggatagcttctttcaaaagag 13
Score = 93.7 bits (47), Expect = 5e-017
Identities = 167/207 (80%)
Strand = Plus / Minus
Query: 583 ggcaaaatcaccttcttcgtcagtggccttagaggtgacagtgaagctcgtgtcgatacc 642
||||||||| || ||||| |||| ||||| || | |||||||||| | || || |||||
Sbjct: 677 ggcaaaatccccatcttcatcagatgcctttgaagggacagtgaagttggtatcaatacc 618
Query: 643 agcaagcaccttcaggagaccctggaagacggcaaataaatgcgcagaaataccaccaat 702
||||||||||||| || || || ||||||||||| ||||| || || |||| || ||
Sbjct: 617 tgcaagcaccttcaaaagtccttgaaagacggcaaagaaatgagctgatgtaccgccgat 558
Query: 703 gacccagaactgctcgttcctccaccattcatcaatgccaacaccactccacctcatctc 762
||||||||| || || ||||||||||| || ||||| ||||| |||||||| || | |||
Sbjct: 557 gacccagaattgttcattcctccaccagtcttcaataccaactccactccatctaagctc 498
Query: 763 aaggataccagtggcaaagattgagat 789
||| || ||||| ||||| || |||||
Sbjct: 497 aagtattccagtagcaaaaatggagat 471
>gb|CV130875.1|CV130875 X9SP07b02 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 882
Score = 182 bits (92), Expect = 6e-044
Identities = 233/280 (83%)
Strand = Plus / Minus
Query: 968 ccataccatatgggacaatgcctgctgaaaagaatttcaatggaaccaagagcccaccga 1027
|||||||||||||| ||||||||||| | | ||| ||||| || || | ||||| |||
Sbjct: 522 ccataccatatggggcaatgcctgctcagtaaaatctcaatagatcccaaggcccatcga 463
Query: 1028 agcacttgattcaaacgatccgaaaggttgataggagcagatcccttgaaagctggtcgc 1087
|| || || ||||||||||| ||||| |||||||||||||| ||||| | ||||| ||
Sbjct: 462 agaacctggttcaaacgatcagaaagattgataggagcagaccccttaagtgctgggcga 403
Query: 1088 ttaggcatgcagtagattgatcgccagcctcgagcatgcatcttgaatccggtgagaatg 1147
||||||||| ||||||||| ||| || ||||||||||||||||| ||||| | |||
Sbjct: 402 ggaggcatgcaatagattgatatccaaccacgagcatgcatcttgaacccggtcaaaata 343
Query: 1148 tcttctgtaacagaaccatagatccacccaatctcagttccccagtcagttttgtcctca 1207
||||||||||| |||||||||||||| |||||||| | ||||| ||||| ||||| |||
Sbjct: 342 tcttctgtaacggaaccatagatccatccaatctctttgccccattcagtcttgtcttca 283
Query: 1208 tagccacagctgatgacatgaatagcttctttcagaagag 1247
|| |||||||| || ||||| ||||||||||||| |||||
Sbjct: 282 tatccacagctaataacatggatagcttctttcaaaagag 243
Score = 56.0 bits (28), Expect = 1e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 395 cccttgaggaaggggtacaggtggacaatcacccagaacgcaaagaagagcttcccgaaa 454
||||||||||| || |||| ||| |||| ||||| | |||||||||||||| || ||
Sbjct: 752 cccttgaggaaaggatacaaatgggcaatgacccaaatagcaaagaagagcttgccaaag 693
Query: 455 agaggtccccatgactggta 474
||||| ||||||||||||||
Sbjct: 692 agaggaccccatgactggta 673
>gb|AY573572.1| Populus tremula x Populus tremuloides cellulose synthase (CesA2)
mRNA, complete cds
Length = 3991
Score = 176 bits (89), Expect = 4e-042
Identities = 395/497 (79%)
Strand = Plus / Minus
Query: 1901 tcacgagacacataaaccaaacgaggaagttcattgccttcaacgtcaagccctccactg 1960
||||||||||| ||||| | |||||| | |||||| || ||||| ||| | ||||| |
Sbjct: 2073 tcacgagacacgtaaactagacgaggcaattcatttccctcaacatcatgaactccatta 2014
Query: 1961 tgacccaggaaaacctgaatcattccaggatggtccctagtattgttcccaggccaaggt 2020
||||| ||||| |||||||||||||||||||| || || ||| ||||| ||||| ||
Sbjct: 2013 tgaccaaggaagacctgaatcattccaggatgatctctgacattattccctggccatgga 1954
Query: 2021 gtaccatcttgcatgatccatccctcctcgggaactttttgtgcattggctacaagacca 2080
|| ||||| ||||| |||| || ||||| ||||| || ||||| |||| || | |||
Sbjct: 1953 gtgccatcctgcattgtccaaccatcctcaggaaccttctgtgccgtggcaactaaccca 1894
Query: 2081 ttgatacgaactttgaattcttcatattctctcttcatggcccggcgttctttcacaaat 2140
|| || ||||||||||| |||||||| |||||||||||||| || ||||| | | ||||
Sbjct: 1893 tttattcgaactttgaactcttcatactctctcttcatggcacgacgttccctgataaat 1834
Query: 2141 gaagtttgaactttgtctttcaagtaatcaattttctgagcaaagtaccattccggagcc 2200
| | | ||| |||||||||| || |||| ||||||||||| |||||||| |||||
Sbjct: 1833 gctggatctactctgtctttcaaatagtcaaccttctgagcaaaataccattctggagct 1774
Query: 2201 ctaggctctatgttgtacttcttacagaacggaacccattttctagcaaactctgaagtt 2260
| ||| || ||| || || |||| ||||| || ||||| ||||| ||||| || || ||
Sbjct: 1773 cgaggttcaatgctgaacctcttgcagaaagggacccactttcttgcaaattcagatgtc 1714
Query: 2261 tcagagagagcatcaaaagtcagcatagcagctccatcatccgaaacatagcaagatacc 2320
||||||| ||| |||||||| ||||| ||||| |||||||| || |||||||| | ||
Sbjct: 1713 tcagagatagcttcaaaagtaagcatggcagcaccatcatctgagacatagcatgcaact 1654
Query: 2321 ttgtcaaccggataatcgacagcaaggatggaaagcacagtatttgcagtgacaagagga 2380
|| || || |||||||| |||||||||||||| | || || |||||||||| ||| |||
Sbjct: 1653 ttttcgactggataatctacagcaaggatggacaagactgtgtttgcagtgataagtgga 1594
Query: 2381 ggctccttcataggatc 2397
|| || |||||||||||
Sbjct: 1593 ggttctttcataggatc 1577
Score = 87.7 bits (44), Expect = 3e-015
Identities = 77/88 (87%)
Strand = Plus / Minus
Query: 1154 gtaacagaaccatagatccacccaatctcagttccccagtcagttttgtcctcatagcca 1213
|||||||| ||||| |||||||||||||| ||||||| |||||||| || ||||| |||
Sbjct: 2832 gtaacagagccataaatccacccaatctcttttccccattcagttttatcttcataacca 2773
Query: 1214 cagctgatgacatgaatagcttctttca 1241
|| || ||||||||||| ||||||||||
Sbjct: 2772 caactaatgacatgaatggcttctttca 2745
Score = 73.8 bits (37), Expect = 4e-011
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 694 accaccaatgacccagaactgctcgttcctccaccattcatcaatgccaacaccactcca 753
|||||||||||||||||||||||| || |||||||| |||| ||||||||||| | |||
Sbjct: 3292 accaccaatgacccagaactgctcatttctccaccagtcatggatgccaacacctcccca 3233
Query: 754 cctcatctcaaggataccagt 774
| ||| || |||||||||||
Sbjct: 3232 ctgcatttcgaggataccagt 3212
Score = 71.9 bits (36), Expect = 2e-010
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 395 cccttgaggaaggggtacaggtggacaatcacccagaacgcaaagaagagcttcccgaaa 454
||||||||||| ||||| ||||||||||| ||||| ||||||||||| ||||| |||||
Sbjct: 3588 cccttgaggaacgggtaaaggtggacaattacccacaacgcaaagaatagcttaccgaag 3529
Query: 455 agaggtccccatgactggtaaccgctattgat 486
|| || ||||| | || |||||| |||||||
Sbjct: 3528 agcggaccccaagtctcgtaaccattattgat 3497
>gb|DT473511.1|DT473511 WS01229.BR_N17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_N17 5', mRNA sequence
Length = 912
Score = 172 bits (87), Expect = 6e-041
Identities = 249/303 (82%)
Strand = Plus / Minus
Query: 2147 tgaactttgtctttcaagtaatcaattttctgagcaaagtaccattccggagccctaggc 2206
||||| |||||||| ||||| ||||| || ||||| ||||||||||| ||||| | |||
Sbjct: 903 tgaaccttgtcttttaagtagtcaatcttttgagcgaagtaccattctggagctcgcggc 844
Query: 2207 tctatgttgtacttcttacagaacggaacccattttctagcaaactctgaagtttcagag 2266
|| || | || ||||| ||||| |||||||||||||||||||| || || ||||||||
Sbjct: 843 tcaatatcatatttcttgcagaaaggaacccattttctagcaaattcagacgtttcagat 784
Query: 2267 agagcatcaaaagtcagcatagcagctccatcatccgaaacatagcaagataccttgtca 2326
| || ||||| |||| |||||||||||||||||| |||||||||||||| || |||||
Sbjct: 783 atggcttcaaatgtcaacatagcagctccatcatctgaaacatagcaagagactttgtcg 724
Query: 2327 accggataatcgacagcaaggatggaaagcacagtatttgcagtgacaagaggaggctcc 2386
|| || ||||| || ||||| || || ||||||||||| || ||||| || ||||| |||
Sbjct: 723 actgggtaatctactgcaagaatagatagcacagtattggctgtgaccagtggaggttcc 664
Query: 2387 ttcataggatccacagtactgacaaagatatcaacaggagctaattgagatggttcacct 2446
|| | ||| || || ||||||||||| || ||||||| ||| |||||||| || || |||
Sbjct: 663 tttaaagggtcgactgtactgacaaaaatgtcaacagcagccaattgagacggctctcct 604
Query: 2447 tct 2449
|||
Sbjct: 603 tct 601
>gb|BU823358.1|BU823358 UB51DPD11 Populus tremula cambium cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 609
Score = 170 bits (86), Expect = 2e-040
Identities = 392/494 (79%)
Strand = Plus / Minus
Query: 1832 acagctgatacacgaacaagtgcattcatggcaccagccttcttgtgatgttggaatcca 1891
|||||||| || |||| ||||||||||| || || || ||||||||||| |||||||||
Sbjct: 504 acagctgaaactcgaatcagtgcattcattgctccggctttcttgtgatgctggaatcca 445
Query: 1892 ggacgtttttcacgagacacataaaccaaacgaggaagttcattgccttcaacgtcaagc 1951
|| | ||||||||||| ||||| || | |||||| || ||||| || || || |||
Sbjct: 444 ggcctcttttcacgagatacatatacaagacgaggtagctcatttccatccgtatcgagc 385
Query: 1952 cctccactgtgacccaggaaaacctgaatcattccaggatggtccctagtattgttccca 2011
|| || |||||||| | ||| ||||| |||||||| || || ||||| | ||| || |||
Sbjct: 384 cccccgctgtgacctaagaacacctggatcattcctgggtgatccctgggattatttcca 325
Query: 2012 ggccaaggtgtaccatcttgcatgatccatccctcctcgggaactttttgtgcattggct 2071
||||| || || ||||| ||||| |||| || || || || | || || || |||||
Sbjct: 324 ggccatggagttccatcctgcattgtccaaccttcttctggcatcttctgagctttggca 265
Query: 2072 acaagaccattgatacgaactttgaattcttcatattctctcttcatggcccggcgttct 2131
|||||| ||||||| || || |||||||||||||||||||||||||| || ||||| |||
Sbjct: 264 acaagagcattgatccgcaccttgaattcttcatattctctcttcattgctcggcgctct 205
Query: 2132 ttcacaaatgaagtttgaactttgtctttcaagtaatcaattttctgagcaaagtaccat 2191
|||||||| |||| || | ||||| |||| |||||||| || || ||||| || |
Sbjct: 204 ttcacaaaagaaggctgtatcttgtccttcagataatcaatcttttgggcaaaataaaac 145
Query: 2192 tccggagccctaggctctatgttgtacttcttacagaacggaacccattttctagcaaac 2251
|| || ||||||||||| || |||| |||||| ||||| || ||||| || || ||||||
Sbjct: 144 tcaggggccctaggctcaatattgtgcttcttgcagaaaggcacccacttccttgcaaac 85
Query: 2252 tctgaagtttcagagagagcatcaaaagtcagcatagcagctccatcatccgaaacatag 2311
|| | ||||||||| || || ||||| |||| |||||| | |||||||| |||||||||
Sbjct: 84 tccgcagtttcagaaagggcttcaaacgtcaacatagctgaaccatcatctgaaacatag 25
Query: 2312 caagataccttgtc 2325
|| ||||| |||||
Sbjct: 24 catgatactttgtc 11
>gb|AJ779945.1|AJ779945 AJ779945 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000800009G06F1, mRNA sequence
Length = 735
Score = 170 bits (86), Expect = 2e-040
Identities = 392/494 (79%)
Strand = Plus / Minus
Query: 1832 acagctgatacacgaacaagtgcattcatggcaccagccttcttgtgatgttggaatcca 1891
|||||||| || |||| ||||||||||| || || || ||||||||||| |||||||||
Sbjct: 512 acagctgaaactcgaatcagtgcattcattgctccggctttcttgtgatgctggaatcca 453
Query: 1892 ggacgtttttcacgagacacataaaccaaacgaggaagttcattgccttcaacgtcaagc 1951
|| | ||||||||||| ||||| || | |||||| || ||||| || || || |||
Sbjct: 452 ggtctcttttcacgagaaacatatacaagacgaggtagctcatttccatctgtatcgagc 393
Query: 1952 cctccactgtgacccaggaaaacctgaatcattccaggatggtccctagtattgttccca 2011
|| ||||||||||| | ||| ||||| |||||||| || || ||||| | ||| || |||
Sbjct: 392 cccccactgtgacctaagaacacctggatcattcctgggtgatccctgggattatttcca 333
Query: 2012 ggccaaggtgtaccatcttgcatgatccatccctcctcgggaactttttgtgcattggct 2071
||||| || || ||||| ||||| |||| || || || || | || || || |||||
Sbjct: 332 ggccacggagttccatcctgcattgtccaaccttcttctggcatcttctgagctttggca 273
Query: 2072 acaagaccattgatacgaactttgaattcttcatattctctcttcatggcccggcgttct 2131
|||||| ||||||| || || |||||||||||||||||||||||||| || ||||| |||
Sbjct: 272 acaagagcattgatccgcaccttgaattcttcatattctctcttcattgctcggcgctct 213
Query: 2132 ttcacaaatgaagtttgaactttgtctttcaagtaatcaattttctgagcaaagtaccat 2191
|||||||| |||| || | ||||| |||| |||||||| || || | ||| || |
Sbjct: 212 ttcacaaaagaaggctgtatcttgtccttcagataatcaatcttttgggaaaaataaaac 153
Query: 2192 tccggagccctaggctctatgttgtacttcttacagaacggaacccattttctagcaaac 2251
|| || ||||| ||||| || |||| |||||| ||||| || ||||| || || ||||||
Sbjct: 152 tcgggggccctgggctcaatattgtgcttcttgcagaaaggcacccacttccttgcaaac 93
Query: 2252 tctgaagtttcagagagagcatcaaaagtcagcatagcagctccatcatccgaaacatag 2311
|||| ||||||||| || || ||||| |||| |||||| | |||||||| |||||||||
Sbjct: 92 tctgcagtttcagaaagggcttcaaatgtcaacatagctgaaccatcatctgaaacatag 33
Query: 2312 caagataccttgtc 2325
|| ||||| |||||
Sbjct: 32 catgatactttgtc 19
>gb|CF234438.1|CF234438 Ptajxojxo2F10F1012 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 163 bits (82), Expect = 6e-038
Identities = 328/410 (80%)
Strand = Plus / Minus
Query: 398 ttgaggaaggggtacaggtggacaatcacccagaacgcaaagaagagcttcccgaaaaga 457
|||||||| ||||| || ||||| ||||||||||| |||||||| ||||| || || ||
Sbjct: 441 ttgaggaaagggtagagatggacgatcacccagaaggcaaagaaaagcttgccaaagagt 382
Query: 458 ggtccccatgactggtaaccgctattgattgcgtaggaaatgccagcgaccacgccgacc 517
|| ||||| ||||| ||||| || ||||| |||| ||| || || || || || || |||
Sbjct: 381 gggccccacgactgataaccactgttgatggcgtgggatatcccggcaacaacacctacc 322
Query: 518 aggttgatgatcaaaatagtggttggtgggatcagaagcgttgtccacttgaacatgtag 577
| ||| | ||| | | ||| ||||||||||| || || |||||||| || ||||||||
Sbjct: 321 aagttaacgatgaggagagttgttggtgggataagcagagttgtccatttaaacatgtac 262
Query: 578 agctcggcaaaatcaccttcttcgtcagtggccttagaggtgacagtgaagctcgtgtcg 637
|| || | |||||||| || ||||| | | ||| || |||||||||||||| |||||
Sbjct: 261 agttccgtgaaatcaccgtcctcgtctgatgacttggacgtgacagtgaagctggtgtca 202
Query: 638 ataccagcaagcaccttcaggagaccctggaagacggcaaataaatgcgcagaaatacca 697
|| ||||| || || || || | || ||||| || ||||| | ||| || |||| ||||
Sbjct: 201 atgccagcgagtactttgagcaagccttggaaaacagcaaaaagatgggctgaaacacca 142
Query: 698 ccaatgacccagaactgctcgttcctccaccattcatcaatgccaacaccactccacctc 757
||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 141 ccaataacccaaaactgttcgttcctccaccattcatcaatcccaacaccactccacctc 82
Query: 758 atctcaaggataccagtggcaaagattgagataaagagcgatataaacca 807
||||| | ||||| || |||||||| || | |||||| || ||||||||
Sbjct: 81 atctccaaaataccggttgcaaagatggaaagaaagagagaaataaacca 32
>gb|AJ777820.1|AJ777820 AJ777820 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400035F01F1, mRNA sequence
Length = 658
Score = 163 bits (82), Expect = 6e-038
Identities = 496/633 (78%), Gaps = 1/633 (0%)
Strand = Plus / Minus
Query: 422 atcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactggtaaccgcta 481
||||||||||| || ||||| ||||| || || || || ||||||||||| ||||| ||
Sbjct: 637 atcacccagaatgcgaagaaaagcttgccaaagagtggaccccatgactgataaccactg 578
Query: 482 ttgattgcgtaggaaatgccagcgaccacgccgaccaggtt-gatgatcaaaatagtggt 540
|||||||| | ||| || ||||| || || || |||| ||| | ||| | | ||| ||
Sbjct: 577 ttgattgcatgggatatcccagcaacaacacccaccaagttanacgatgaggagagttgt 518
Query: 541 tggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttcttc 600
||| |||| || || |||||||| ||||||| ||| | || ||||||||||| || ||
Sbjct: 517 tggcgggacaagtagagttgtccatttgaacaagtataattcagcaaaatcaccgtcctc 458
Query: 601 gtcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcaccttcaggag 660
||| | ||||| || || ||||||||| | ||||| || |||||||| || || || |
Sbjct: 457 gtctgatgccttggacgtaacagtgaagttggtgtcaatgccagcaagtactttgagcaa 398
Query: 661 accctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaactgctcgtt 720
|| ||||| || ||||| | ||| || |||| |||||| || ||||| ||||| || ||
Sbjct: 397 gccttggaaaacagcaaaaagatgggctgaaacaccaccgataacccaaaactgttcatt 338
Query: 721 cctccaccattcatcaatgccaacaccactccacctcatctcaaggataccagtggcaaa 780
||||||||| |||||||| ||||||||||||||||||||||| | ||| || || |||||
Sbjct: 337 cctccaccactcatcaatcccaacaccactccacctcatctccaagatgccggttgcaaa 278
Query: 781 gattgagataaagagcgatataaaccaaacactctctaggttactaatctttgggatgat 840
||| || | |||||| || |||||||| | || | | ||||||||||| ||| || ||
Sbjct: 277 gatggaaagaaagagagaaataaaccatatgcttgcgatgttactaatctgtggaataat 218
Query: 841 gaacttcccagtgagaagacaaactgctggcaatatgcagtacaggaggagcgggattga 900
||| || | || || ||||| | ||||| | | |||| |||||||| || || || |
Sbjct: 217 gaatttgtctgtaagtagacagatagctggaagtgtgcaatacaggagaagaggaatggc 158
Query: 901 tgtgagtggataaattgttgtgttgatataagcaaatctctccaggaatttaagccgacc 960
|||| ||||||||| || ||||| | ||| ||||| ||||| || |||| | || |||
Sbjct: 157 ggtgattggataaatggtagtgtttacatatgcaaacctctcaagccatttcaacctacc 98
Query: 961 tccatagccataccatatgggacaatgcctgctgaaaagaatttcaatggaaccaagagc 1020
|||||||||||||| || |||||||||| |||| ||||||||||| ||||| |||||
Sbjct: 97 accatagccataccaaattggacaatgccgactgagaagaatttcaacagaacccagagc 38
Query: 1021 ccaccgaagcacttgattcaaacgatccgaaag 1053
||| ||||||||||| |||| |||||| |||||
Sbjct: 37 ccatcgaagcacttggttcagacgatcagaaag 5
>gb|AJ779545.1|AJ779545 AJ779545 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000800003H02F1, mRNA sequence
Length = 713
Score = 159 bits (80), Expect = 9e-037
Identities = 386/488 (79%)
Strand = Plus / Minus
Query: 1832 acagctgatacacgaacaagtgcattcatggcaccagccttcttgtgatgttggaatcca 1891
|||||||| || |||| ||||||||||| || || || ||||||||||| |||||||||
Sbjct: 489 acagctgaaactcgaatcagtgcattcattgctccggctttcttgtgatgctggaatcca 430
Query: 1892 ggacgtttttcacgagacacataaaccaaacgaggaagttcattgccttcaacgtcaagc 1951
|| | ||||||||||| ||||| || | |||||| || ||||| || || || |||
Sbjct: 429 ggtctcttttcacgagaaacatatacaagacgaggtagctcatttccatctgtatcgagc 370
Query: 1952 cctccactgtgacccaggaaaacctgaatcattccaggatggtccctagtattgttccca 2011
|| ||||||||||| | ||| ||||| |||||||| || || ||||| | ||| || |||
Sbjct: 369 cccccactgtgacctaagaacacctggatcattcctgggtgatccctgggattatttcca 310
Query: 2012 ggccaaggtgtaccatcttgcatgatccatccctcctcgggaactttttgtgcattggct 2071
||||| || || || || ||||| |||| || || || || | || || || |||||
Sbjct: 309 ggccacggagttccgtcctgcattgtccaaccttcttctggcatcttctgagctttggca 250
Query: 2072 acaagaccattgatacgaactttgaattcttcatattctctcttcatggcccggcgttct 2131
|||||| ||||||| || || |||||||||||||||||||||||||| || ||||| |||
Sbjct: 249 acaagagcattgatccgcaccttgaattcttcatattctctcttcattgctcggcgctct 190
Query: 2132 ttcacaaatgaagtttgaactttgtctttcaagtaatcaattttctgagcaaagtaccat 2191
|||||||| |||| || | ||||| |||| |||||||| || || | ||| || |
Sbjct: 189 ttcacaaaagaaggctgtatcttgtccttcagataatcaatcttttgggaaaaataaaac 130
Query: 2192 tccggagccctaggctctatgttgtacttcttacagaacggaacccattttctagcaaac 2251
|| || ||||| ||||| || |||| |||||| ||||| || ||||| || || ||||||
Sbjct: 129 tcgggggccctgggctcaatattgtgcttcttgcagaaaggcacccacttccttgcaaac 70
Query: 2252 tctgaagtttcagagagagcatcaaaagtcagcatagcagctccatcatccgaaacatag 2311
|||| ||||||||| || || ||||| |||| |||||| | |||||||| |||||||||
Sbjct: 69 tctgcagtttcagaaagggcctcaaatgtcaacatagctgaaccatcatctgaaacatag 10
Query: 2312 caagatac 2319
|| |||||
Sbjct: 9 catgatac 2
>gb|AY162181.1| Populus tremuloides cellulose synthase (CesA4) mRNA, complete cds
Length = 3640
Score = 159 bits (80), Expect = 9e-037
Identities = 230/280 (82%)
Strand = Plus / Minus
Query: 968 ccataccatatgggacaatgcctgctgaaaagaatttcaatggaaccaagagcccaccga 1027
|||||||||||||| ||||||||||| | | ||| ||||| || || | ||||| |||
Sbjct: 2558 ccataccatatggggcaatgcctgctcagtaaaatctcaatagatcccaaggcccatcga 2499
Query: 1028 agcacttgattcaaacgatccgaaaggttgataggagcagatcccttgaaagctggtcgc 1087
|| || || ||||||||||| ||||| || ||||||||||| ||||| || ||||| ||
Sbjct: 2498 agaacctggttcaaacgatcagaaagattaataggagcagaccccttaaatgctgggcga 2439
Query: 1088 ttaggcatgcagtagattgatcgccagcctcgagcatgcatcttgaatccggtgagaatg 1147
||||||||| ||||||||| ||| || |||||||||||||| || || || | |||
Sbjct: 2438 ggaggcatgcaatagattgatatccaaccacgagcatgcatcttaaacccagtcaaaata 2379
Query: 1148 tcttctgtaacagaaccatagatccacccaatctcagttccccagtcagttttgtcctca 1207
|||||||||||||| ||||||||||| |||||||| | |||| ||||| ||||| |||
Sbjct: 2378 tcttctgtaacagacccatagatccatccaatctctttggcccattcagtcttgtcttca 2319
Query: 1208 tagccacagctgatgacatgaatagcttctttcagaagag 1247
|| |||||||| || ||||| ||||||||||||| |||||
Sbjct: 2318 tatccacagctaataacatggatagcttctttcaaaagag 2279
Score = 153 bits (77), Expect = 6e-035
Identities = 242/297 (81%)
Strand = Plus / Minus
Query: 2257 agtttcagagagagcatcaaaagtcagcatagcagctccatcatccgaaacatagcaaga 2316
||||||||| || || ||||| |||| |||||| | |||||||| ||||||||||| ||
Sbjct: 1266 agtttcagaaagggcttcaaatgtcaacatagctgaaccatcatctgaaacatagcatga 1207
Query: 2317 taccttgtcaaccggataatcgacagcaaggatggaaagcacagtatttgcagtgacaag 2376
||| ||||| || || ||||| |||||||| ||||| | |||||| ||||| || ||||
Sbjct: 1206 tactttgtcgacagggtaatcaacagcaagaatggacaacacagtgtttgctgttacaat 1147
Query: 2377 aggaggctccttcataggatccacagtactgacaaagatatcaacaggagctaattgaga 2436
|||||| || ||||| |||||||| ||||| |||||||| |||| ||||||||| || ||
Sbjct: 1146 aggaggttctttcatgggatccactgtactaacaaagatgtcaataggagctaactgtga 1087
Query: 2437 tggttcaccttctcggtcataccttaaagccagtctatcaaggtatgtttcacggttgat 2496
|||||| || || || ||||| ||||| || || || || ||||| || || || |||||
Sbjct: 1086 tggttctccatcacgatcatatcttaatgctagcctgtcgaggtaagtctcgcgattgat 1027
Query: 2497 tggggaccactttgggaactgatccaaaatccaggacaaagcaaaccagatctcaca 2553
|| ||| ||||| |||||||||| || ||||||||| |||||||| ||||||||
Sbjct: 1026 aggcatccattttggaaactgatccagaagccaggacaaggcaaaccaaatctcaca 970
Score = 137 bits (69), Expect = 3e-030
Identities = 252/313 (80%)
Strand = Plus / Minus
Query: 1832 acagctgatacacgaacaagtgcattcatggcaccagccttcttgtgatgttggaatcca 1891
|||||||| || |||| ||||||||||| || || || ||||||||||| |||||||||
Sbjct: 1691 acagctgaaactcgaatcagtgcattcattgctccggctttcttgtgatgctggaatcca 1632
Query: 1892 ggacgtttttcacgagacacataaaccaaacgaggaagttcattgccttcaacgtcaagc 1951
|| | ||||||||||| ||||| || | |||||| || ||||| || || || |||
Sbjct: 1631 ggtctcttttcacgagaaacatatacaagacgaggtagctcatttccatccgtatcgagc 1572
Query: 1952 cctccactgtgacccaggaaaacctgaatcattccaggatggtccctagtattgttccca 2011
|| ||||||||||| | ||| |||||||||||||| || || ||||| | ||| || |||
Sbjct: 1571 cccccactgtgacctaagaacacctgaatcattcctgggtgatccctgggattatttcca 1512
Query: 2012 ggccaaggtgtaccatcttgcatgatccatccctcctcgggaactttttgtgcattggct 2071
||||| || || ||||| ||||| |||| || || || || | ||||| || |||||
Sbjct: 1511 ggccatggagttccatcctgcattgtccaaccttcttctggcatcttttgagctttggca 1452
Query: 2072 acaagaccattgatacgaactttgaattcttcatattctctcttcatggcccggcgttct 2131
|||||| ||||||| || || |||||||||||||||||||| ||||| || ||||| |||
Sbjct: 1451 acaagagcattgatccgcaccttgaattcttcatattctcttttcattgctcggcgctct 1392
Query: 2132 ttcacaaatgaag 2144
|||||||| ||||
Sbjct: 1391 ttcacaaaagaag 1379
Score = 131 bits (66), Expect = 2e-028
Identities = 207/254 (81%)
Strand = Plus / Minus
Query: 536 gtggttggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcacct 595
|||||||| ||||| ||||| | |||||| ||||||| || ||||| |||||||| ||
Sbjct: 2990 gtggttggagggatgagaagagatgtccatttgaacacataaagctctgcaaaatcccca 2931
Query: 596 tcttcgtcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcaccttc 655
||||| |||| ||||| || |||||||||||| | || || ||||| ||||||||||||
Sbjct: 2930 tcttcatcagatgcctttgaagtgacagtgaagttggtatcaatacctgcaagcaccttc 2871
Query: 656 aggagaccctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaactgc 715
| || || || ||||||||||| | ||| || || ||||||||||||||||||| ||
Sbjct: 2870 aaaagtccttgaaagacggcaaagagatgagctgatgtaccaccaatgacccagaattgt 2811
Query: 716 tcgttcctccaccattcatcaatgccaacaccactccacctcatctcaaggataccagtg 775
|| ||||||||||| || ||||| ||||| |||||||| || | |||||| || |||||
Sbjct: 2810 tcattcctccaccagtcttcaataccaactccactccatctaagctcaagtattccagta 2751
Query: 776 gcaaagattgagat 789
||||| || |||||
Sbjct: 2750 gcaaaaatggagat 2737
Score = 56.0 bits (28), Expect = 1e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 395 cccttgaggaaggggtacaggtggacaatcacccagaacgcaaagaagagcttcccgaaa 454
||||||||||| || |||| ||| |||| ||||| | |||||||||||||| || ||
Sbjct: 3131 cccttgaggaaaggatacaaatgggcaatgacccaaatagcaaagaagagcttgccaaag 3072
Query: 455 agaggtccccatgactggta 474
||||| ||||||||||||||
Sbjct: 3071 agaggaccccatgactggta 3052
>gb|AY330165.1| Populus tremuloides CesA5A-like mRNA, partial cds
Length = 566
Score = 149 bits (75), Expect = 9e-034
Identities = 198/239 (82%)
Strand = Plus / Minus
Query: 1169 atccacccaatctcagttccccagtcagttttgtcctcatagccacagctgatgacatga 1228
|||||||| || ||| |||||||||| || ||||| || || ||||||||||||||||||
Sbjct: 557 atccaccctatttcacttccccagtctgtcttgtcttcgtatccacagctgatgacatga 498
Query: 1229 atagcttctttcagaagagactctggagttgcagattgtggaacaccgccatattccatc 1288
||||||||||| |||||||||||||| || ||||| | ||||||||||||| |||||
Sbjct: 497 atagcttctttgagaagagactctggggtggcagactcaggaacaccgccattctccata 438
Query: 1289 agagtagaggctacaaaaacactggactggccaaatctcttctccaagctcatttgagac 1348
||||| || || ||||| ||| | || ||||||||||| ||||| | |||||||||||
Sbjct: 437 agagtggaagcaacaaacacagttgattggccaaatcttttctcaagtgtcatttgagac 378
Query: 1349 ataatcagcgatttctcatcatcaaactgagaaccttcaatcccttcctctatatcttc 1407
|| | || ||||| |||||||| || || |||||||| |||||| |||||||||||
Sbjct: 377 atgagcaatgatttttcatcatcgaatccagtaccttcaaccccttcttctatatcttc 319
Score = 81.8 bits (41), Expect = 2e-013
Identities = 131/161 (81%)
Strand = Plus / Minus
Query: 1541 ggaggctcataaccatataaggccgttctgttaaacacacaaccagttcccacataaact 1600
||||||||||| ||||| ||||||||||| || || ||||| || || |||||||| ||
Sbjct: 176 ggaggctcatagccatacaaggccgttctattgaaaacacaccctgtacccacatataca 117
Query: 1601 ggcccttgaatgccatcaagacctctcaagttaatatcgaaaaacacagtgttcctgttt 1660
|| ||||| || ||||| | ||||| || || ||||| || || |||||||| | |||
Sbjct: 116 gggccttggattccatccaatcctcttaaatttatatcaaagaaaacagtgttacggttg 57
Query: 1661 gcatatcggtcattcctatcaataccatcaaacctctgagg 1701
|||||||| || || |||||||| |||||||| ||||||||
Sbjct: 56 gcatatcgatcgtttctatcaatcccatcaaatctctgagg 16
>gb|AJ778214.1|AJ778214 AJ778214 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400040H10F1, mRNA sequence
Length = 612
Score = 137 bits (69), Expect = 3e-030
Identities = 372/473 (78%)
Strand = Plus / Minus
Query: 1853 gcattcatggcaccagccttcttgtgatgttggaatccaggacgtttttcacgagacaca 1912
|||||||| || || || ||||||||||| ||||||||||| | |||||||| || |||
Sbjct: 489 gcattcattgctccggctttcttgtgatgctggaatccaggtctcttttcacgggaaaca 430
Query: 1913 taaaccaaacgaggaagttcattgccttcaacgtcaagccctccactgtgacccaggaaa 1972
|| || | ||||| || ||||| || || ||||||||| ||||||||||||| ||
Sbjct: 429 tatacaagtcgaggtagctcatttccatccgtgtcaagccccccactgtgacccaaaaac 370
Query: 1973 acctgaatcattccaggatggtccctagtattgttcccaggccaaggtgtaccatcttgc 2032
||||| |||||||| || || ||||| | ||| || |||||||| || || ||||| |||
Sbjct: 369 acctggatcattcctgggtgatcccttggattatttccaggccatggagttccatcctgc 310
Query: 2033 atgatccatccctcctcgggaactttttgtgcattggctacaagaccattgatacgaact 2092
|| |||| || || || || | || || || ||||| |||||| ||||||| || ||
Sbjct: 309 atcgtccaaccttcttcaggcatcttctgagctttggcaacaagagcattgattcgcacc 250
Query: 2093 ttgaattcttcatattctctcttcatggcccggcgttctttcacaaatgaagtttgaact 2152
|||||||||||||||||||||||||| || ||||| ||||| ||||| |||| || |
Sbjct: 249 ttgaattcttcatattctctcttcattgctcggcgctctttgacaaaagaaggctgtatc 190
Query: 2153 ttgtctttcaagtaatcaattttctgagcaaagtaccattccggagccctaggctctatg 2212
||||| |||| |||||||| || || ||||| || | || || ||||||||||| ||
Sbjct: 189 ttgtccttcagataatcaatcttttgggcaaaataaaactcaggggccctaggctcaata 130
Query: 2213 ttgtacttcttacagaacggaacccattttctagcaaactctgaagtttcagagagagca 2272
||| |||||| ||||| || ||||| || || |||||||| | ||||||||| || ||
Sbjct: 129 ctgtgcttcttgcagaaaggcacccacttccttgcaaactccgcagtttcagaaagggct 70
Query: 2273 tcaaaagtcagcatagcagctccatcatccgaaacatagcaagataccttgtc 2325
||||| |||| ||| || | |||||||| || |||||||| ||||| |||||
Sbjct: 69 tcaaatgtcaacattgctgaaccatcatctgagacatagcatgatactttgtc 17
>gb|DT476519.1|DT476519 WS01229.B21_N17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_N17 3', mRNA sequence
Length = 853
Score = 133 bits (67), Expect = 5e-029
Identities = 299/375 (79%), Gaps = 1/375 (0%)
Strand = Plus / Plus
Query: 386 cccatgaggcccttgaggaaggggtacaggtggacaatcacccagaacgcaaagaagagc 445
||||| || ||||||||||| ||||| || || | |||||||||||| |||||||| |||
Sbjct: 465 cccatcagacccttgaggaaagggtaaagatgaataatcacccagaaagcaaagaaaagc 524
Query: 446 ttcccgaaaagaggtccccatgactggtaaccgctattgattgcgtaggaaatgccagcg 505
|| || || || || ||||| || || ||||| || || || |||||||| | |||||
Sbjct: 525 ttgccaaagaggggaccccaagattgataaccactgtttatggcgtaggagactccagca 584
Query: 506 accacgccgaccaggttgatgatcaaaatagtggttggtgggatcaga-agcgttgtcca 564
||||| || || || ||||| || | | ||| ||||||||||| || | ||||||||
Sbjct: 585 accactccaactagattgattatgaggagagtagttggtgggataagttaaagttgtcca 644
Query: 565 cttgaacatgtagagctcggcaaaatcaccttcttcgtcagtggccttagaggtgacagt 624
||||||||| || ||||||| ||||||||| ||||| || | || || || ||||||||
Sbjct: 645 cttgaacatatatagctcggtaaaatcaccatcttcatcggatgcttttgaagtgacagt 704
Query: 625 gaagctcgtgtcgataccagcaagcaccttcaggagaccctggaagacggcaaataaatg 684
|| | || || || |||||||| || ||||| || || |||||||| ||||||| |||
Sbjct: 705 aaaattggtatctattccagcaaggactttcagcaggccttggaagacagcaaatagatg 764
Query: 685 cgcagaaataccaccaatgacccagaactgctcgttcctccaccattcatcaatgccaac 744
|| || | ||| ||||| |||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 765 agctgacacacctccaataacccagaactgctcatttctccaccattcgtcaatcccaac 824
Query: 745 accactccacctcat 759
||||||||| |||||
Sbjct: 825 accactccatctcat 839
>gb|AY095297.1| Populus tremuloides cellulose synthase (CesA2) mRNA, complete cds
Length = 3277
Score = 133 bits (67), Expect = 5e-029
Identities = 193/235 (82%)
Strand = Plus / Minus
Query: 1937 ccttcaacgtcaagccctccactgtgacccaggaaaacctgaatcattccaggatggtcc 1996
|||||||||||| | |||||||||||||| || || || |||||||| ||||| || |||
Sbjct: 1489 ccttcaacgtcatgtcctccactgtgaccgagaaatacttgaatcataccagggtgatcc 1430
Query: 1997 ctagtattgttcccaggccaaggtgtaccatcttgcatgatccatccctcctcgggaact 2056
|| |||||||| |||||||| ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 1429 ctcgtattgtttccaggccatggtgttccatcttgcataatccacccctctgtaggaacc 1370
Query: 2057 ttttgtgcattggctacaagaccattgatacgaactttgaattcttcatattctctcttc 2116
|| ||||| || ||||||| |||| || ||||| ||||||||||||||||||||||||
Sbjct: 1369 ttctgtgcttttgctacaatcgcatttatccgaaccttgaattcttcatattctctcttc 1310
Query: 2117 atggcccggcgttctttcacaaatgaagtttgaactttgtctttcaagtaatcaa 2171
|| || || ||||| || ||||| | | ||||||||||| || | ||||||||
Sbjct: 1309 atagctcgacgttccttaacaaaggttggctgaactttgtccttgaggtaatcaa 1255
Score = 123 bits (62), Expect = 5e-026
Identities = 337/428 (78%), Gaps = 3/428 (0%)
Strand = Plus / Minus
Query: 359 acaatggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaggtgg 418
||||| ||||| || | ||| ||| ||||||| || || |||||||| ||||| || |||
Sbjct: 3004 acaatagtcggtgtcctgttttgcctccccattagacctttgaggaatgggtagagatgg 2945
Query: 419 acaatcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactggtaaccg 478
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 2944 acaatcacccagaaggcaaagaagagcttcccgaatagaggtccccatgactggtaccca 2885
Query: 479 ctattgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtg 538
| || || || | || | ||||| || || || || ||||||||||| || ||||||
Sbjct: 2884 ttgtttatggcatctgagactccagcaacaactccaacaaggttgatgattaagatagtg 2825
Query: 539 gttggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttct 598
||||| ||||| || || |||||||| || || || ||||| |||||| | ||
Sbjct: 2824 gttggagggataagcagggttgtccatttaaaggcataaagctctccaaaat---cgtca 2768
Query: 599 tcgtcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcaccttcagg 658
||||| || ||||| || |||||||||||| | ||||||||| || | || |||||
Sbjct: 2767 tcgtctgtagccttggatgtgacagtgaagtttaggtcgatacctgctaaaactttcaga 2708
Query: 659 agaccctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaactgctcg 718
||||| |||| || ||||| | || ||||| | |||||| || |||||||| ||||||
Sbjct: 2707 agaccttggacaacagcaaagaggtgagcagacacaccacctataacccagaattgctcg 2648
Query: 719 ttcctccaccattcatcaatgccaacaccactccacctcatctcaaggataccagtggca 778
|| ||||||||||| ||||||| || || ||||| || | |||||| || || |||| |
Sbjct: 2647 tttctccaccattcctcaatgcttactccgctccatctgagctcaagaatgcccgtggaa 2588
Query: 779 aagattga 786
||||||||
Sbjct: 2587 aagattga 2580
Score = 83.8 bits (42), Expect = 4e-014
Identities = 156/194 (80%)
Strand = Plus / Minus
Query: 1589 cccacataaactggcccttgaatgccatcaagacctctcaagttaatatcgaaaaacaca 1648
|||||||| ||||| || ||||| ||||| ||||| ||| |||||||||||| || |||
Sbjct: 1837 cccacatacactggaccctgaattccatctagacccttcatgttaatatcgaagaaaaca 1778
Query: 1649 gtgttcctgtttgcatatcggtcattcctatcaataccatcaaacctctgaggaaattgg 1708
||||| ||||| || ||||| |||| ||||||| |||||||| || |||||||||||
Sbjct: 1777 gtgtttctgttggcgtatcgatcatgtgtatcaatgccatcaaatctttgaggaaattgc 1718
Query: 1709 acataacagacattccttcctaggtttgggtccataaggaagcacatagcttctcgaaga 1768
|| || || || || |||| | | |||||||| | ||| |||||||| |||||||
Sbjct: 1717 acgtagcaaactctctttccaatctgggggtccatcaagaaacacatagcctctcgaacg 1658
Query: 1769 gccttgctattatt 1782
||||||||||||||
Sbjct: 1657 gccttgctattatt 1644
Score = 50.1 bits (25), Expect = 6e-004
Identities = 190/245 (77%)
Strand = Plus / Minus
Query: 992 ctgaaaagaatttcaatggaaccaagagcccaccgaagcacttgattcaaacgatccgaa 1051
||||||| |||||||| || ||||||||||| || |||||||| || | ||||| ||
Sbjct: 2371 ctgaaaaaaatttcaacagatccaagagcccagcggagcacttggtttagccgatctgat 2312
Query: 1052 aggttgataggagcagatcccttgaaagctggtcgcttaggcatgcagtagattgatcgc 1111
|| ||||| ||||| || ||||| || || | || ||| ||||| ||||| || || | |
Sbjct: 2311 agattgatgggagctgaacccttaaatgcagctctctttggcatacagtaaatagacctc 2252
Query: 1112 cagcctcgagcatgcatcttgaatccggtgagaatgtcttctgtaacagaaccatagatc 1171
||||| ||| ||||||||| || || || ||||| || || || | ||||| || |||
Sbjct: 2251 cagccacgacaatgcatcttaaaacctgtcagaatatcctccgtgatcgaaccgtaaatc 2192
Query: 1172 cacccaatctcagttccccagtcagttttgtcctcatagccacagctgatgacatgaata 1231
|| || | ||| |||||| ||||||||||| ||||| ||||| ||||| ||||| ||
Sbjct: 2191 cagcccagctcgagtccccattcagttttgtcttcatatccacaactgatcacatggatg 2132
Query: 1232 gcttc 1236
|||||
Sbjct: 2131 gcttc 2127
Score = 46.1 bits (23), Expect = 0.010
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 2369 gtgacaagaggaggctccttcataggatccacagtactgacaaagatatcaacaggagc 2427
||||| ||||| || || ||||| |||||||| ||||||||||||| ||| || |||||
Sbjct: 1057 gtgactagagggggttctttcattggatccacggtactgacaaagacatccactggagc 999
>gb|AY162180.1| Populus tremuloides cellulose synthase (CesA7) mRNA, complete cds
Length = 3809
Score = 133 bits (67), Expect = 5e-029
Identities = 439/563 (77%)
Strand = Plus / Minus
Query: 1850 agtgcattcatggcaccagccttcttgtgatgttggaatccaggacgtttttcacgagac 1909
|||| ||||||||| ||||||||||| || |||| ||| || || | || ||||||||
Sbjct: 1843 agtgaattcatggccccagccttcttatggtgttcgaaccctggtctcttctcacgagaa 1784
Query: 1910 acataaaccaaacgaggaagttcattgccttcaacgtcaagccctccactgtgacccagg 1969
|||||||||| |||||| | || ||||| |||||| | ||||||| ||||| |||
Sbjct: 1783 acataaaccagacgaggtaactcgcatccttccacgtcacgtactccactttgaccaagg 1724
Query: 1970 aaaacctgaatcattccaggatggtccctagtattgttcccaggccaaggtgtaccatct 2029
|||||||||||||| ||||||||||| | |||||| |||||||| || || ||||||
Sbjct: 1723 aaaacctgaatcatgccaggatggtctcgtacattgtttccaggccatggagttccatct 1664
Query: 2030 tgcatgatccatccctcctcgggaactttttgtgcattggctacaagaccattgatacga 2089
||||| |||| || || || ||||| |||||||| ||| || | ||||| || |
Sbjct: 1663 tgcattgtccaaccatcttccggaaccttttgtgctgtggaaaccaacccatttatcctc 1604
Query: 2090 actttgaattcttcatattctctcttcatggcccggcgttctttcacaaatgaagtttga 2149
|||||||||||||||||||||||||||||||| || | ||| | ||||||| | |||
Sbjct: 1603 actttgaattcttcatattctctcttcatggcacgcctttccctgacaaatgctggatga 1544
Query: 2150 actttgtctttcaagtaatcaattttctgagcaaagtaccattccggagccctaggctct 2209
||||| | |||||| || ||||| ||||||| ||| ||||| || || || | |||||
Sbjct: 1543 actttatttttcaaatagtcaatcttctgagaaaaataccactcaggggcacggggctcg 1484
Query: 2210 atgttgtacttcttacagaacggaacccattttctagcaaactctgaagtttcagagaga 2269
||||| | ||||| || || |||||||| || |||||||| || || || || ||||||
Sbjct: 1483 atgttaaatttcttgcaaaatggaacccacttcctagcaaattcagacgtctcggagaga 1424
Query: 2270 gcatcaaaagtcagcatagcagctccatcatccgaaacatagcaagataccttgtcaacc 2329
|| ||||| || ||||| || || ||||| || || |||||||| | || || || ||
Sbjct: 1423 gcttcaaatgtaagcatggcggcaccatcgtctgacacatagcatgcaactttatccaca 1364
Query: 2330 ggataatcgacagcaaggatggaaagcacagtatttgcagtgacaagaggaggctccttc 2389
|||||||| || || || || || || ||||| || ||||||| || ||||| || |||
Sbjct: 1363 ggataatcaaccgcgagaatagagagaacagtgttcgcagtgatcagcggaggttctttc 1304
Query: 2390 ataggatccacagtactgacaaa 2412
|||||||| || ||||| |||||
Sbjct: 1303 ataggatcaactgtacttacaaa 1281
Score = 60.0 bits (30), Expect = 6e-007
Identities = 221/282 (78%), Gaps = 2/282 (0%)
Strand = Plus / Minus
Query: 962 ccatagccataccatatgggacaatgcctgctgaaaagaatttcaatggaaccaagagcc 1021
||||| |||||||| || ||||| || || ||||| | ||| |||| ||||| || |||
Sbjct: 2740 ccataaccataccaaattggacagtgtctactgaagaaaatctcaacagaaccgagggcc 2681
Query: 1022 caccgaagcacttgattcaaacgatccgaaaggttgataggagcagatcccttgaaagct 1081
|||||||| || || | | |||||| || ||||| || ||||| || |||||||| ||
Sbjct: 2680 caccgaagaacctggtgtagacgatctgacaggttaattggagctgaccccttgaatgca 2621
Query: 1082 ggtcgcttaggcatgcagtagattgatcgccagcctcgagca-tgcatcttgaatccggt 1140
|| |||||||| |||||||| | || ||||| || | ||| |||||||||||||| ||
Sbjct: 2620 ggccgcttaggtatgcagtaaacagaccgccatccatg-gcagtgcatcttgaatcctgt 2562
Query: 1141 gagaatgtcttctgtaacagaaccatagatccacccaatctcagttccccagtcagtttt 1200
| || || ||||||||||| ||||| ||||| |||| || ||||||| || |||||
Sbjct: 2561 caagatatcctctgtaacagagccatatatccagccaacttcctttccccattctgtttt 2502
Query: 1201 gtcctcatagccacagctgatgacatgaatagcttctttcag 1242
|| ||||| ||||||||||| || || || |||||| ||||
Sbjct: 2501 atcttcataaccacagctgataacttggatggcttctctcag 2460
Score = 44.1 bits (22), Expect = 0.038
Identities = 70/86 (81%)
Strand = Plus / Minus
Query: 689 gaaataccaccaatgacccagaactgctcgttcctccaccattcatcaatgccaacacca 748
|||| ||| ||||| ||||| || || || || |||||||| ||||| || || ||||||
Sbjct: 3013 gaaacacctccaatcacccaaaattgttcatttctccaccagtcatctattccgacacca 2954
Query: 749 ctccacctcatctcaaggataccagt 774
| |||| |||||| |||||||||||
Sbjct: 2953 ccccactgcatctcgaggataccagt 2928
>gb|CF232388.1|CF232388 PtaJXO0009H2H0216 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 629
Score = 131 bits (66), Expect = 2e-028
Identities = 338/428 (78%), Gaps = 3/428 (0%)
Strand = Plus / Minus
Query: 359 acaatggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaggtgg 418
||||| ||||| || | ||| ||| ||||||| || || |||||||| ||||| || |||
Sbjct: 541 acaatagtcggtgtcctgttttgcctccccattagacctttgaggaatgggtagagatgg 482
Query: 419 acaatcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactggtaaccg 478
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 481 acaatcacccagaaggcaaagaagagcttcccgaatagaggtccccatgactggtaccca 422
Query: 479 ctattgattgcgtaggaaatgccagcgaccacgccgaccaggttgatgatcaaaatagtg 538
| || || || | || | ||||| || || || || ||||||||||| || ||||||
Sbjct: 421 ttgtttatggcatctgagactccagcaacaactccaacaaggttgatgattaagatagtg 362
Query: 539 gttggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcaccttct 598
||||| ||||| || || |||||||| || || || ||||| |||||| | ||
Sbjct: 361 gttggagggataagcagggttgtccatttaaaggcatatagctctccaaaat---cgtca 305
Query: 599 tcgtcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcaccttcagg 658
||||| || ||||| || |||||||||||| | ||||||||||| || | || |||||
Sbjct: 304 tcgtctgttgccttggaagtgacagtgaagtttgtgtcgatacctgctaaaactttcaga 245
Query: 659 agaccctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaactgctcg 718
||||| |||| || ||||| | || || || | |||||| || |||||||| ||||||
Sbjct: 244 agaccttggacaacagcaaagaggtgagctgatacaccacctataacccagaattgctcg 185
Query: 719 ttcctccaccattcatcaatgccaacaccactccacctcatctcaaggataccagtggca 778
|| ||||||||||| ||||||| || || ||||| || | |||||| || || |||| |
Sbjct: 184 tttctccaccattcctcaatgcttactccgctccatctgagctcaagaatgcccgtggaa 125
Query: 779 aagattga 786
||||||||
Sbjct: 124 aagattga 117
>gb|AJ774508.1|AJ774508 AJ774508 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300021B12F1, mRNA sequence
Length = 655
Score = 129 bits (65), Expect = 8e-028
Identities = 319/403 (79%), Gaps = 3/403 (0%)
Strand = Plus / Minus
Query: 384 tccccatgaggcccttgaggaaggggtacaggtggacaatcacccagaacgcaaagaaga 443
||||||| || || |||||||| ||||| || ||||||||||||||||| ||||||||||
Sbjct: 490 tccccattagacctttgaggaatgggtagagatggacaatcacccagaaggcaaagaaga 431
Query: 444 gcttcccgaaaagaggtccccatgactggtaaccgctattgattgcgtaggaaatgccag 503
|||||||||| |||||||||||||||||||| || | || || || | || | ||||
Sbjct: 430 gcttcccgaatagaggtccccatgactggtacccattgtttatggcatctgagactccag 371
Query: 504 cgaccacgccgaccaggttgatgatcaaaatagtggttggtgggatcagaagcgttgtcc 563
| || || || || ||||||||||| || ||||||||||| ||||| || || |||||||
Sbjct: 370 caacaactccaacaaggttgatgattaagatagtggttggagggataagcagggttgtcc 311
Query: 564 acttgaacatgtagagctcggcaaaatcaccttcttcgtcagtggccttagaggtgacag 623
| || || || ||||| |||||| | || ||||| || ||||| || |||||||
Sbjct: 310 atttaaaggcatatagctctccaaaat---cctcatcgtctgttgccttggatgtgacag 254
Query: 624 tgaagctcgtgtcgataccagcaagcaccttcaggagaccctggaagacggcaaataaat 683
||||| | ||||||||||| || | || ||||| ||||| |||| || ||||| | |
Sbjct: 253 tgaagtttgtgtcgatacctgctaaaactttcagaagaccttggacaacagcaaagaggt 194
Query: 684 gcgcagaaataccaccaatgacccagaactgctcgttcctccaccattcatcaatgccaa 743
| || || | |||||| || |||||||| |||||||| ||||||||||| ||||||| |
Sbjct: 193 gagctgatacaccacctataacccagaattgctcgtttctccaccattcctcaatgctta 134
Query: 744 caccactccacctcatctcaaggataccagtggcaaagattga 786
| || ||||| || | |||||| || || |||| |||||||||
Sbjct: 133 ctccgctccatctgagctcaagaatgcccgtggaaaagattga 91
>gb|CA925680.1|CA925680 MTU7TL.P4.E11 Aspen leaf cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 708
Score = 127 bits (64), Expect = 3e-027
Identities = 177/215 (82%)
Strand = Plus / Plus
Query: 968 ccataccatatgggacaatgcctgctgaaaagaatttcaatggaaccaagagcccaccga 1027
|||||||||||||| ||||||||||| | | ||| ||||| || || | ||||| |||
Sbjct: 492 ccataccatatggggcaatgcctgctcagcaaaatctcaatagatcccaaggcccatcga 551
Query: 1028 agcacttgattcaaacgatccgaaaggttgataggagcagatcccttgaaagctggtcgc 1087
|| || || ||||| ||||| ||||| |||||||||||||| ||||| || ||||| ||
Sbjct: 552 agaacctggttcaatcgatcagaaagattgataggagcagaccccttaaatgctgggcga 611
Query: 1088 ttaggcatgcagtagattgatcgccagcctcgagcatgcatcttgaatccggtgagaatg 1147
||||||||| ||||||||| |||||| |||||||||||||| | || || | |||
Sbjct: 612 ggaggcatgcaatagattgatatccagccacgagcatgcatcttngacccagtcaaaata 671
Query: 1148 tcttctgtaacagaaccatagatccacccaatctc 1182
||||| |||||||||||||||||||| ||||||||
Sbjct: 672 tcttcagtaacagaaccatagatccatccaatctc 706
Score = 101 bits (51), Expect = 2e-019
Identities = 204/255 (80%)
Strand = Plus / Plus
Query: 535 agtggttggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcacc 594
||||||||| ||||| ||||| | |||||| ||||||| || ||||| |||||||| ||
Sbjct: 59 agtggttggagggatgagaagagatgtccatttgaacacataaagctctgcaaaatcccc 118
Query: 595 ttcttcgtcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcacctt 654
|| || || | || || || |||||||||||| | || |||||||| |||||||| ||
Sbjct: 119 atcctcatcggatgcttttgaagtgacagtgaagttggtatcgatacctgcaagcacttt 178
Query: 655 caggagaccctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaactg 714
|| || || |||||||| ||||| | ||| || || | ||||| || |||||||| ||
Sbjct: 179 caaaagcccttggaagacagcaaagagatgagctgacgtgccaccgatcacccagaattg 238
Query: 715 ctcgttcctccaccattcatcaatgccaacaccactccacctcatctcaaggataccagt 774
|| ||||||||||| || ||||| ||||| |||||||| || | |||||| || |||||
Sbjct: 239 ttcattcctccaccagtcttcaataccaactccactccatctaagctcaagtattccagt 298
Query: 775 ggcaaagattgagat 789
||||||||| |||||
Sbjct: 299 ggcaaagatggagat 313
>gb|CK100621.1|CK100621 C057P32.5pR Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA clone C057P32 5', mRNA sequence
Length = 468
Score = 127 bits (64), Expect = 3e-027
Identities = 175/212 (82%)
Strand = Plus / Minus
Query: 902 gtgagtggataaattgttgtgttgatataagcaaatctctccaggaatttaagccgacct 961
|||| ||||||||| || ||||| | ||| ||||| ||||| || |||| |||| |||
Sbjct: 224 gtgattggataaatggtagtgtttacatatgcaaacctctcgagccatttcagcctacca 165
Query: 962 ccatagccataccatatgggacaatgcctgctgaaaagaatttcaatggaaccaagagcc 1021
|||||||||||||| || |||||||||| |||| ||||||||||| ||||| ||||||
Sbjct: 164 ccatagccataccaaattggacaatgccgactgagaagaatttcaacagaacccagagcc 105
Query: 1022 caccgaagcacttgattcaaacgatccgaaaggttgataggagcagatcccttgaaagct 1081
|| ||||||||||| |||| |||||| ||||| || ||||||||||| || || || |||
Sbjct: 104 catcgaagcacttggttcagacgatcagaaagattaataggagcagaccctttaaaggct 45
Query: 1082 ggtcgcttaggcatgcagtagattgatcgcca 1113
|| ||||| ||||| || || ||||| |||||
Sbjct: 44 gggcgcttgggcatacaataaattgaccgcca 13
Score = 109 bits (55), Expect = 8e-022
Identities = 103/119 (86%)
Strand = Plus / Minus
Query: 689 gaaataccaccaatgacccagaactgctcgttcctccaccattcatcaatgccaacacca 748
|||| |||||| |||||||| ||||| || ||||||||||| |||||||| |||||||||
Sbjct: 437 gaaacaccaccgatgacccaaaactgttcattcctccaccactcatcaatcccaacacca 378
Query: 749 ctccacctcatctcaaggataccagtggcaaagattgagataaagagcgatataaacca 807
|||||||||||||| | |||||| || |||||||| || | |||||| || ||||||||
Sbjct: 377 ctccacctcatctccaagataccggttgcaaagatggaaagaaagagagaaataaacca 319
>gb|CF235713.1|CF235713 PtaJXT0026B7B0703 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 639
Score = 123 bits (62), Expect = 5e-026
Identities = 152/182 (83%)
Strand = Plus / Minus
Query: 1937 ccttcaacgtcaagccctccactgtgacccaggaaaacctgaatcattccaggatggtcc 1996
|||||||||||| | |||||||||||||| || || || |||||||| ||||| || |||
Sbjct: 198 ccttcaacgtcatgtcctccactgtgaccgagaaatacttgaatcataccagggtgatcc 139
Query: 1997 ctagtattgttcccaggccaaggtgtaccatcttgcatgatccatccctcctcgggaact 2056
|| |||||||| |||||||| ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 138 ctcgtattgtttccaggccatggtgttccatcttgcataatccacccctctgtaggaacc 79
Query: 2057 ttttgtgcattggctacaagaccattgatacgaactttgaattcttcatattctctcttc 2116
|| ||||| || ||||||| |||| || ||||| ||||||||||| ||||||||||||
Sbjct: 78 ttctgtgcttttgctacaatcgcatttatccgaaccttgaattcttcgtattctctcttc 19
Query: 2117 at 2118
||
Sbjct: 18 at 17
Score = 83.8 bits (42), Expect = 4e-014
Identities = 156/194 (80%)
Strand = Plus / Minus
Query: 1589 cccacataaactggcccttgaatgccatcaagacctctcaagttaatatcgaaaaacaca 1648
|||||||| ||||| || ||||| ||||| ||||| ||| ||||||||| || || |||
Sbjct: 546 cccacatacactggaccctgaattccatctagacccttcatgttaatatcaaagaaaaca 487
Query: 1649 gtgttcctgtttgcatatcggtcattcctatcaataccatcaaacctctgaggaaattgg 1708
||||| ||||| || ||||| |||| ||||||| |||||||| || |||||||||||
Sbjct: 486 gtgtttctgttggcgtatcgatcatgtgtatcaatgccatcaaatctttgaggaaattgc 427
Query: 1709 acataacagacattccttcctaggtttgggtccataaggaagcacatagcttctcgaaga 1768
|| || ||||| ||| |||| | | |||||||| | ||| |||||||| ||||| |
Sbjct: 426 acgtagcagactttctttccaatctgggggtccatcaagaaacacatagcctctcggacg 367
Query: 1769 gccttgctattatt 1782
||||||||||||||
Sbjct: 366 gccttgctattatt 353
>gb|CK320732.1|CK320732 X9SP01b11 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 769
Score = 123 bits (62), Expect = 5e-026
Identities = 242/302 (80%)
Strand = Plus / Minus
Query: 641 ccagcaagcaccttcaggagaccctggaagacggcaaataaatgcgcagaaataccacca 700
|||||||| || ||||| || || |||||||| ||||| | ||| || || | ||| |||
Sbjct: 366 ccagcaaggactttcagcaggccttggaagacagcaaagagatgagctgacacacctcca 307
Query: 701 atgacccagaactgctcgttcctccaccattcatcaatgccaacaccactccacctcatc 760
|| ||||||||||| || ||||||||||||||||| || |||||||||||||| |||||
Sbjct: 306 ataacccagaactgttcattcctccaccattcatcgatcccaacaccactccatctcatt 247
Query: 761 tcaaggataccagtggcaaagattgagataaagagcgatataaaccaaacactctctagg 820
|| | |||||||| ||||||||||| | |||||| ||||| ||||| | ||| | | |
Sbjct: 246 tccaaaataccagttgcaaagattgaaagaaagagggatatgaaccagatactggcaatg 187
Query: 821 ttactaatctttgggatgatgaacttcccagtgagaagacaaactgctggcaatatgcag 880
|||||||||| ||| || |||||||| || || ||||| || || || |||||| | ||
Sbjct: 186 ttactaatctgtggaataatgaactttcccgtaagaaggcacacggcaggcaatgtacaa 127
Query: 881 tacaggaggagcgggattgatgtgagtggataaattgttgtgttgatataagcaaatctc 940
|| || || || || ||||||| ||||||||| || ||||||| | |||||||||||
Sbjct: 126 taggcaagaagaggaatggatgtgattggataaatggtggtgttgaaagaagcaaatctc 67
Query: 941 tc 942
||
Sbjct: 66 tc 65
Score = 58.0 bits (29), Expect = 3e-006
Identities = 164/209 (78%)
Strand = Plus / Minus
Query: 386 cccatgaggcccttgaggaaggggtacaggtggacaatcacccagaacgcaaagaagagc 445
||||| || ||||||||||| || || || || | |||||||||||| |||||||| |||
Sbjct: 622 cccatcagacccttgaggaaaggataaagatgaataatcacccagaaagcaaagaaaagc 563
Query: 446 ttcccgaaaagaggtccccatgactggtaaccgctattgattgcgtaggaaatgccagcg 505
|| || || ||||| ||||| || || ||||| || || || ||||| || | || ||
Sbjct: 562 ttgccaaagagaggaccccaagattgataaccactgtttatggcgtaagagactcctgca 503
Query: 506 accacgccgaccaggttgatgatcaaaatagtggttggtgggatcagaagcgttgtccac 565
||||| || ||||| ||||| || | | ||| ||||||||||| || | || |||||
Sbjct: 502 accactccaaccagattgattatgaggagagtagttggtgggataagtaaagtggtccat 443
Query: 566 ttgaacatgtagagctcggcaaaatcacc 594
|||||||| || ||||||| |||||||||
Sbjct: 442 ttgaacatatatagctcggtaaaatcacc 414
>gb|AY196961.1| Populus tremuloides cellulose synthase 6 (CesA6) mRNA, complete cds
Length = 3773
Score = 123 bits (62), Expect = 5e-026
Identities = 350/446 (78%)
Strand = Plus / Minus
Query: 1945 gtcaagccctccactgtgacccaggaaaacctgaatcattccaggatggtccctagtatt 2004
|||| |||||||||| || || ||||||||||||||||||||||| || || | |||
Sbjct: 1609 gtcatgccctccactttggccaaggaaaacctgaatcattccagggtgatcacggacatt 1550
Query: 2005 gttcccaggccaaggtgtaccatcttgcatgatccatccctcctcgggaactttttgtgc 2064
||||||||||| || |||||||| ||||| ||||||| || || || || || || ||
Sbjct: 1549 attcccaggccatggagtaccatcctgcattgtccatccatcttctgggaccttatgagc 1490
Query: 2065 attggctacaagaccattgatacgaactttgaattcttcatattctctcttcatggcccg 2124
||||| || | | ||||||| |||| ||| || |||||||| ||||||||||| || |
Sbjct: 1489 cttggcaaccaaagcattgatccgaattttaaactcttcatactctctcttcattgctct 1430
Query: 2125 gcgttctttcacaaatgaagtttgaactttgtctttcaagtaatcaattttctgagcaaa 2184
||||| || |||||||||| || || || ||||||| ||||| || || |||| |||
Sbjct: 1429 tcgttccttgacaaatgaagcctgcaccttatctttcagataatctatcttttgagaaaa 1370
Query: 2185 gtaccattccggagccctaggctctatgttgtacttcttacagaacggaacccattttct 2244
|| | ||||| |||| ||| || ||| | | ||||||||||| || |||||||| |
Sbjct: 1369 ataaaactccggtgcccgaggttcaatgctaaatttcttacagaatgggacccatttctt 1310
Query: 2245 agcaaactctgaagtttcagagagagcatcaaaagtcagcatagcagctccatcatccga 2304
||||| || || ||||| || | || ||||| |||||||||||||| |||||||| ||
Sbjct: 1309 tgcaaattcagatgtttctgacaatgcctcaaatgtcagcatagcagcaccatcatcaga 1250
Query: 2305 aacatagcaagataccttgtcaaccggataatcgacagcaaggatggaaagcacagtatt 2364
|||||| || || ||||||||||| || ||||| || ||||| ||||| || || || ||
Sbjct: 1249 aacataacatgaaaccttgtcaacagggtaatcaactgcaagaatggacagaaccgtgtt 1190
Query: 2365 tgcagtgacaagaggaggctccttca 2390
||| || || ||||| ||||| ||||
Sbjct: 1189 tgcggtcaccagagggggctctttca 1164
Score = 91.7 bits (46), Expect = 2e-016
Identities = 157/194 (80%)
Strand = Plus / Minus
Query: 1604 ccttgaatgccatcaagacctctcaagttaatatcgaaaaacacagtgttcctgtttgca 1663
|||||||||||||| | |||||||| || ||||| || || ||||| |||| ||| |||
Sbjct: 1950 ccttgaatgccatctaaacctctcatattgatatcaaagaatacagtattccggttggca 1891
Query: 1664 tatcggtcattcctatcaataccatcaaacctctgaggaaattggacataacagacattc 1723
||||| ||| |||| ||||| |||||||||||||| || || |||||||| || || ||
Sbjct: 1890 tatcgatcactcctgtcaatgccatcaaacctctgtgggaactggacatagcacactctc 1831
Query: 1724 cttcctaggtttgggtccataaggaagcacatagcttctcgaagagccttgctattattg 1783
| || || ||| ||||| | ||| ||||| ||||||| ||||||||| || ||||||
Sbjct: 1830 ttcccaagcaatggatccatcatgaaacacattgcttctctaagagccttactgttattg 1771
Query: 1784 atgtagtggtcaca 1797
|||||||| |||||
Sbjct: 1770 atgtagtgatcaca 1757
Score = 77.8 bits (39), Expect = 3e-012
Identities = 84/99 (84%)
Strand = Plus / Minus
Query: 1151 tctgtaacagaaccatagatccacccaatctcagttccccagtcagttttgtcctcatag 1210
||||||||||||||||| |||||||| | ||| | ||||| || ||||| || ||||||
Sbjct: 2421 tctgtaacagaaccataaatccaccctacctctttgccccattctgttttatcttcatag 2362
Query: 1211 ccacagctgatgacatgaatagcttctttcagaagagac 1249
|||||||| |||||||| || |||||||| || ||||||
Sbjct: 2361 ccacagctaatgacatggatggcttctttaagcagagac 2323
Score = 52.0 bits (26), Expect = 2e-004
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 413 aggtggacaatcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgact 470
||||| || ||||||||||| |||||||| ||||| || || ||||| ||||||||||
Sbjct: 3156 aggtgaactatcacccagaatgcaaagaaaagcttaccaaacagaggcccccatgact 3099
Score = 50.1 bits (25), Expect = 6e-004
Identities = 82/101 (81%)
Strand = Plus / Minus
Query: 2503 ccactttgggaactgatccaaaatccaggacaaagcaaaccagatctcacatatgacgga 2562
|||||||||||| ||||| | |||||| || | |||||||| |||||||| || || ||
Sbjct: 1051 ccactttgggaattgatcaagaatccatgaaacggcaaaccaaatctcacagatcacaga 992
Query: 2563 taaaagccacagtggatatgcattgttcacaggatgtgtga 2603
|| |||||| | | | |||||| ||||||||||||||||
Sbjct: 991 tataagccataaagcaaatgcatcattcacaggatgtgtga 951
Score = 48.1 bits (24), Expect = 0.002
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 295 gaatggatcgatacgaacccacatcagggaaaagat 330
|||||||||||| |||||||||| |||||||||||
Sbjct: 3274 gaatggatcgatccgaacccacaaaagggaaaagat 3239
>gb|CF234212.1|CF234212 PtaJXO3H12H1216 Poplar cDNA library from young opposite xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 462
Score = 121 bits (61), Expect = 2e-025
Identities = 310/389 (79%), Gaps = 4/389 (1%)
Strand = Plus / Minus
Query: 663 cctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaactgctcgttcc 722
||||||| || ||||| ||||| || |||| |||||| |||||||| |||| || ||||
Sbjct: 393 cctggaaaacagcaaaaaaatgggctgaaacaccaccgatgacccannactgttcattcc 334
Query: 723 tccaccat-tcatcaatgccaacaccactccacctcatctcaaggataccagtggcaaag 781
||||||| |||||||| ||||||||||||||||||||||| | |||||| || ||||||
Sbjct: 333 tccaccagctcatcaatcccaacaccactccacctcatctccaagataccggttgcaaag 274
Query: 782 attgagataaagagcgatataaaccaaacactctctaggttactaatctttgggatgatg 841
|| || | |||||| || |||||||| | || | | ||||||||||| ||| || |||
Sbjct: 273 atggaaagaaagagagaaataaaccatatgcttgcgatgttactaatctgtggaataatg 214
Query: 842 aacttcccagtgagaagacaaactgctggcaatatgcagtacaggaggagcgggattgat 901
|| || | ||||| ||||| | ||||| | | |||| |||||||| || || || |
Sbjct: 213 aatttgtctgtgagtagacagatagctggaagtgtgcaatacaggagaagaggaatggcg 154
Query: 902 gtgagtggataaattgttgtgttgatataagcaaatctctccagg-aatttaagccgacc 960
|||| ||||||||| || ||||| | ||| ||||| ||||| | | |||| |||| ||
Sbjct: 153 gtgattggataaatggtagtgtttacatatgcaaacctctcaangccatttcagcctgcc 94
Query: 961 tccata-gccataccatatgggacaatgcc-tgctgaaaagaatttcaatggaaccaaga 1018
||||| ||||||||| || |||||||||| |||| ||||||||||| ||||| |||
Sbjct: 93 accatangccataccaaattggacaatgccganctgagaagaatttcaacagaacccaga 34
Query: 1019 gcccaccgaagcacttgattcaaacgatc 1047
||||| ||||||||||| |||| ||||||
Sbjct: 33 gcccatcgaagcacttggttcagacgatc 5
>gb|CK107258.1|CK107258 UB51DPD11.5pR Populus active cambium cDNA library Populus tremula
cDNA clone UB51DPD11 5', mRNA sequence
Length = 596
Score = 121 bits (61), Expect = 2e-025
Identities = 212/261 (81%), Gaps = 1/261 (0%)
Strand = Plus / Minus
Query: 2066 ttggctacaagaccattgatacgaactttgaattcttcatattctctcttcatggcccgg 2125
||||| |||||| ||||||| || || |||||||||||||||||||||||||| || |||
Sbjct: 268 ttggcaacaagagcattgatccgcaccttgaattcttcatattctctcttcattgctcgg 209
Query: 2126 cgttctttcacaaatgaagtttgaactttgtctttcaagtaatcaattttctgagcaaag 2185
|| ||||||||||| |||| || | ||||| |||| |||||||| || || |||||
Sbjct: 208 cgctctttcacaaaagaaggctgtatcttgtccttcagataatcaatcttttgggcaaaa 149
Query: 2186 taccattccggagccctaggctctatgttgtacttcttacagaacggaacccattttcta 2245
|| | || || ||||||||||| || |||| |||||| ||||| || ||||| || ||
Sbjct: 148 taaaactcaggggccctaggctcaatattgtgcttcttgcagaaaggcacccacttcctt 89
Query: 2246 gcaaactctgaagtttcagagagagcatcaaaagtcagcatagcagctccatcatc-cga 2304
|||||||| | ||||||||| || || ||||| |||| |||||| | |||||||| ||
Sbjct: 88 gcaaactccgcagtttcagaaagggcttcaaacgtcaacatagctgaaccatcatcttga 29
Query: 2305 aacatagcaagataccttgtc 2325
||||||||| ||||| |||||
Sbjct: 28 aacatagcatgatactttgtc 8
>gb|CF235321.1|CF235321 PtaJXT0021D9D0907 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 486
Score = 119 bits (60), Expect = 8e-025
Identities = 102/116 (87%)
Strand = Plus / Minus
Query: 359 acaatggtcggcgtgcggttctgcttccccatgaggcccttgaggaaggggtacaggtgg 418
||||| ||||| || | ||| ||| ||||||| || || |||||||| ||||| || |||
Sbjct: 158 acaatagtcggtgtcctgttttgcctccccattagacctttgaggaatgggtagagatgg 99
Query: 419 acaatcacccagaacgcaaagaagagcttcccgaaaagaggtccccatgactggta 474
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 98 acaatcacccagaaggcaaagaagagcttcccgaatagaggtccccatgactggta 43
>gb|AJ775294.1|AJ775294 AJ775294 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300030F05F1, mRNA sequence
Length = 385
Score = 117 bits (59), Expect = 3e-024
Identities = 83/91 (91%)
Strand = Plus / Minus
Query: 384 tccccatgaggcccttgaggaaggggtacaggtggacaatcacccagaacgcaaagaaga 443
||||||| || || |||||||| ||||| || ||||||||||||||||| ||||||||||
Sbjct: 221 tccccattagacctttgaggaatgggtagagatggacaatcacccagaaggcaaagaaga 162
Query: 444 gcttcccgaaaagaggtccccatgactggta 474
|||||||||| ||||||||||||||||||||
Sbjct: 161 gcttcccgaatagaggtccccatgactggta 131
>gb|AJ775532.1|AJ775532 AJ775532 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300033F04F1, mRNA sequence
Length = 589
Score = 117 bits (59), Expect = 3e-024
Identities = 83/91 (91%)
Strand = Plus / Minus
Query: 384 tccccatgaggcccttgaggaaggggtacaggtggacaatcacccagaacgcaaagaaga 443
||||||| || || |||||||| ||||| || ||||||||||||||||| ||||||||||
Sbjct: 345 tccccattagacctttgaggaatgggtagagatggacaatcacccagaaggcaaagaaga 286
Query: 444 gcttcccgaaaagaggtccccatgactggta 474
|||||||||| ||||||||||||||||||||
Sbjct: 285 gcttcccgaatagaggtccccatgactggta 255
>gb|DT500468.1|DT500468 PX0015.BR_I21 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0015_I21
5', mRNA sequence
Length = 687
Score = 115 bits (58), Expect = 1e-023
Identities = 178/218 (81%)
Strand = Plus / Minus
Query: 536 gtggttggtgggatcagaagcgttgtccacttgaacatgtagagctcggcaaaatcacct 595
|||||||| ||||| ||||| | |||||| ||||||| || ||||| |||||||| ||
Sbjct: 234 gtggttggagggatgagaagagatgtccatttgaacacataaagctctgcaaaatcccca 175
Query: 596 tcttcgtcagtggccttagaggtgacagtgaagctcgtgtcgataccagcaagcaccttc 655
||||| |||| ||||| || |||||||||||| | || || ||||| ||||||||||||
Sbjct: 174 tcttcatcagatgcctttgaagtgacagtgaagttggtatcaatacctgcaagcaccttc 115
Query: 656 aggagaccctggaagacggcaaataaatgcgcagaaataccaccaatgacccagaactgc 715
| || || || ||||||||||| | ||| || || ||||||| ||||||||||| ||
Sbjct: 114 aaaagtccttgaaagacggcaaagagatgagctgatgtaccaccgatgacccagaattgt 55
Query: 716 tcgttcctccaccattcatcaatgccaacaccactcca 753
|| ||||||||||| || ||||| ||||| ||||||||
Sbjct: 54 tcattcctccaccagtcttcaataccaactccactcca 17
Score = 56.0 bits (28), Expect = 1e-005
Identities = 67/80 (83%)
Strand = Plus / Minus
Query: 395 cccttgaggaaggggtacaggtggacaatcacccagaacgcaaagaagagcttcccgaaa 454
||||||||||| || |||| ||| |||| ||||| | |||||||||||||| || ||
Sbjct: 375 cccttgaggaaaggatacaaatgggcaatgacccaaatagcaaagaagagcttgccaaag 316
Query: 455 agaggtccccatgactggta 474
||||| ||||||||||||||
Sbjct: 315 agaggaccccatgactggta 296
>gb|CV252351.1|CV252351 PX0011.B21_G15 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0011_G15 3', mRNA sequence
Length = 445
Score = 113 bits (57), Expect = 5e-023
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 398 ttgaggaaggggtacaggtggacaatcacccagaacgcaaagaagagcttcccgaaaaga 457
|||||||| ||||| || ||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 315 ttgaggaacgggtaaagatggacaatcacccagaaggcaaagaagagcttcccgaataga 374
Query: 458 ggtccccatgactggta 474
|||||||||||||||||
Sbjct: 375 ggtccccatgactggta 391
>gb|AJ778410.1|AJ778410 AJ778410 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000500004B05F1, mRNA sequence
Length = 634
Score = 111 bits (56), Expect = 2e-022
Identities = 80/88 (90%)
Strand = Plus / Minus
Query: 384 tccccatgaggcccttgaggaaggggtacaggtggacaatcacccagaacgcaaagaaga 443
||||||| || || |||||||| ||||| || ||||||||||||||||| ||||||||||
Sbjct: 341 tccccattagacctttgaggaatgggtagagatggacaatcacccagaaggcaaagaaga 282
Query: 444 gcttcccgaaaagaggtccccatgactg 471
|||||||||| |||||||||||||||||
Sbjct: 281 gcttcccgaatagaggtccccatgactg 254
Score = 46.1 bits (23), Expect = 0.010
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 518 aggttgatgatcaaaatagtggttggtgggatcagaagcgttgtcca 564
||||||||||| || ||||||||||| ||||| || || ||||||||
Sbjct: 207 aggttgatgattaagatagtggttggagggatgagcagggttgtcca 161
Score = 46.1 bits (23), Expect = 0.010
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 599 tcgtcagtggccttagaggtgacagtgaagctcgtgtcgataccagc 645
||||| || ||||| || |||||||||||| | ||||||||||||||
Sbjct: 128 tcgtctgttgccttggatgtgacagtgaagtttgtgtcgataccagc 82
>gb|CB239511.1|CB239511 RSH12F10 two-month-old roots from clone 'Beaupre' grown for 19 days
under restricted irrigation Populus trichocarpa x
Populus deltoides cDNA 5', mRNA sequence
Length = 606
Score = 109 bits (55), Expect = 8e-022
Identities = 187/231 (80%)
Strand = Plus / Minus
Query: 559 tgtccacttgaacatgtagagctcggcaaaatcaccttcttcgtcagtggccttagaggt 618
|||||| ||||||| || ||||| |||||||| || ||||| |||| ||||| || ||
Sbjct: 593 tgtccatttgaacacataaagctctgcaaaatccccatcttcatcagaagcctttgaagt 534
Query: 619 gacagtgaagctcgtgtcgataccagcaagcaccttcaggagaccctggaagacggcaaa 678
|||||||||| | || || ||||| ||||||||||||| || || || |||||||||||
Sbjct: 533 gacagtgaagttggtatcaatacctgcaagcaccttcaaaagtccttgaaagacggcaaa 474
Query: 679 taaatgcgcagaaataccaccaatgacccagaactgctcgttcctccaccattcatcaat 738
| ||| || || ||||||| ||||||||||| || || ||||||||||| || |||||
Sbjct: 473 gagatgagctgatgtaccaccgatgacccagaattgttcattcctccaccagtcttcaat 414
Query: 739 gccaacaccactccacctcatctcaaggataccagtggcaaagattgagat 789
||||| |||||||| || | |||||| || ||||| ||||| || |||||
Sbjct: 413 accaactccactccatctaagctcaagtattccagtagcaaaaatggagat 363
Score = 99.6 bits (50), Expect = 8e-019
Identities = 142/173 (82%)
Strand = Plus / Minus
Query: 968 ccataccatatgggacaatgcctgctgaaaagaatttcaatggaaccaagagcccaccga 1027
|||||||||||||| ||||||||||| | | ||| ||||| || || ||||| |||
Sbjct: 184 ccataccatatggggcaatgcctgctcagtaaaatctcaatagatcccnaggcccatcga 125
Query: 1028 agcacttgattcaaacgatccgaaaggttgataggagcagatcccttgaaagctggtcgc 1087
|| || || ||||||||||| ||||| |||||||||||||| ||||| || ||||| ||
Sbjct: 124 agaacctggttcaaacgatcagaaagattgataggagcagaccccttaaatgctgggcga 65
Query: 1088 ttaggcatgcagtagattgatcgccagcctcgagcatgcatcttgaatccggt 1140
||||||||| ||||||||| ||| || ||||||||||||||||| |||||
Sbjct: 64 ggaggcatgcaatagattgatatccaaccacgagcatgcatcttgaacccggt 12
>gb|CV244615.1|CV244615 WS0255.B21_C09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0255_C09
3', mRNA sequence
Length = 402
Score = 107 bits (54), Expect = 3e-021
Identities = 159/194 (81%)
Strand = Plus / Minus
Query: 1604 ccttgaatgccatcaagacctctcaagttaatatcgaaaaacacagtgttcctgtttgca 1663
|||||||||||||| | |||||||| || ||||| || || |||||||||| ||| |||
Sbjct: 205 ccttgaatgccatccaaacctctcatattgatatcaaagaatacagtgttccggttggca 146
Query: 1664 tatcggtcattcctatcaataccatcaaacctctgaggaaattggacataacagacattc 1723
||||| ||| |||| ||||| |||||||||||||| || || |||||||| || || ||
Sbjct: 145 tatcgatcactcctgtcaatgccatcaaacctctgtgggaactggacatagcacactctc 86
Query: 1724 cttcctaggtttgggtccataaggaagcacatagcttctcgaagagccttgctattattg 1783
|||| || ||| ||||| | ||| ||||| ||||||| ||||||||| || ||||||
Sbjct: 85 tttccaagtaatggatccatcatgaaacacattgcttctctaagagccttactgttattg 26
Query: 1784 atgtagtggtcaca 1797
|||||||| |||||
Sbjct: 25 atgtagtgatcaca 12
>gb|DT489371.1|DT489371 WS02542.B21_A18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02542_A18 3', mRNA sequence
Length = 402
Score = 107 bits (54), Expect = 3e-021
Identities = 159/194 (81%)
Strand = Plus / Minus
Query: 1604 ccttgaatgccatcaagacctctcaagttaatatcgaaaaacacagtgttcctgtttgca 1663
|||||||||||||| | |||||||| || ||||| || || |||||||||| ||| |||
Sbjct: 205 ccttgaatgccatccaaacctctcatattgatatcaaagaatacagtgttccggttggca 146
Query: 1664 tatcggtcattcctatcaataccatcaaacctctgaggaaattggacataacagacattc 1723
||||| ||| |||| ||||| |||||||||||||| || || |||||||| || || ||
Sbjct: 145 tatcgatcactcctgtcaatgccatcaaacctctgtgggaactggacatagcacactctc 86
Query: 1724 cttcctaggtttgggtccataaggaagcacatagcttctcgaagagccttgctattattg 1783
|||| || ||| ||||| | ||| ||||| ||||||| ||||||||| || ||||||
Sbjct: 85 tttccaagtaatggatccatcatgaaacacattgcttctctaagagccttactgttattg 26
Query: 1784 atgtagtggtcaca 1797
|||||||| |||||
Sbjct: 25 atgtagtgatcaca 12
>gb|BI071413.1|BI071413 C057P32U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 357
Score = 105 bits (53), Expect = 1e-020
Identities = 137/166 (82%)
Strand = Plus / Minus
Query: 902 gtgagtggataaattgttgtgttgatataagcaaatctctccaggaatttaagccgacct 961
|||| ||||||||| || ||||| | ||| ||||| ||||| || |||| |||| ||
Sbjct: 218 gtgattggataaatggtagtgtttacatatgcaaacctctcgagccatttcagcctnccn 159
Query: 962 ccatagccataccatatgggacaatgcctgctgaaaagaatttcaatggaaccaagagcc 1021
|||||||||||||| || |||||||||| |||| ||||||||||| ||||| ||||||
Sbjct: 158 ccatagccataccaaattggacaatgccgactgagaagaatttcaacagaacccagagcc 99
Query: 1022 caccgaagcacttgattcaaacgatccgaaaggttgataggagcag 1067
|| |||||| |||| |||| |||||| ||||| || ||||||||||
Sbjct: 98 catcgaagcncttggttcagacgatcagaaagattaataggagcag 53
>gb|BI128217.1|BI128217 G072P74Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 490
Score = 105 bits (53), Expect = 1e-020
Identities = 149/181 (82%)
Strand = Plus / Minus
Query: 384 tccccatgaggcccttgaggaaggggtacaggtggacaatcacccagaacgcaaagaaga 443
||||||| || || |||||||| ||||| || ||||||||||||||||| ||||||||||
Sbjct: 209 tccccattagacctttgaggaatgggtagagatggacaatcacccagaaggcaaagaaga 150
Query: 444 gcttcccgaaaagaggtccccatgactggtaaccgctattgattgcgtaggaaatgccag 503
||||||| || ||||||||||||||||| || ||| | || || || | || | ||||
Sbjct: 149 gcttcccaaatagaggtccccatgactgatacccgttgtttatggcatctgagactccag 90
Query: 504 cgaccacgccgaccaggttgatgatcaaaatagtggttggtgggatcagaagcgttgtcc 563
| || || || || ||||||||||| || ||||||||||| ||||| || || |||||||
Sbjct: 89 caacaactccaacgaggttgatgattaagatagtggttggagggataagcagggttgtcc 30
Query: 564 a 564
|
Sbjct: 29 a 29
>gb|CK102305.1|CK102305 G072P74.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G072P74 5', mRNA sequence
Length = 389
Score = 105 bits (53), Expect = 1e-020
Identities = 149/181 (82%)
Strand = Plus / Minus
Query: 384 tccccatgaggcccttgaggaaggggtacaggtggacaatcacccagaacgcaaagaaga 443
||||||| || || |||||||| ||||| || ||||||||||||||||| ||||||||||
Sbjct: 209 tccccattagacctttgaggaatgggtagagatggacaatcacccagaaggcaaagaaga 150
Query: 444 gcttcccgaaaagaggtccccatgactggtaaccgctattgattgcgtaggaaatgccag 503
||||||| || ||||||||||||||||| || ||| | || || || | || | ||||
Sbjct: 149 gcttcccaaatagaggtccccatgactgatacccgttgtttatggcatctgagactccag 90
Query: 504 cgaccacgccgaccaggttgatgatcaaaatagtggttggtgggatcagaagcgttgtcc 563
| || || || || ||||||||||| || ||||||||||| ||||| || || |||||||
Sbjct: 89 caacaactccaacgaggttgatgattaagatagtggttggagggataagcagggttgtcc 30
Query: 564 a 564
|
Sbjct: 29 a 29
>gb|BU897746.1|BU897746 X067G02 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 367
Score = 103 bits (52), Expect = 5e-020
Identities = 79/88 (89%)
Strand = Plus / Minus
Query: 384 tccccatgaggcccttgaggaaggggtacaggtggacaatcacccagaacgcaaagaaga 443
||||||| || || |||||||| ||||| || ||||||||||||||||| ||||||||||
Sbjct: 99 tccccattagacctttgaggaatgggtagagatggacaatcacccagaaggcaaagaaga 40
Query: 444 gcttcccgaaaagaggtccccatgactg 471
||||||| || |||||||||||||||||
Sbjct: 39 gcttcccaaatagaggtccccatgactg 12
>gb|CF237222.1|CF237222 Ptajxtjxt3E10E1010 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 441
Score = 103 bits (52), Expect = 5e-020
Identities = 79/88 (89%)
Strand = Plus / Minus
Query: 384 tccccatgaggcccttgaggaaggggtacaggtggacaatcacccagaacgcaaagaaga 443
||||||| || || |||||||| ||||| || ||||||||||||||||| ||||||||||
Sbjct: 138 tccccattagacctttgaggaatgggtagagatggacaatcacccagaaggcaaagaaga 79
Query: 444 gcttcccgaaaagaggtccccatgactg 471
||||||| || |||||||||||||||||
Sbjct: 78 gcttcccaaatagaggtccccatgactg 51
>gb|CN550567.1|CN550567 GQ0241.B3_I15 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0241_I15 5', mRNA sequence
Length = 777
Score = 103 bits (52), Expect = 5e-020
Identities = 79/88 (89%)
Strand = Plus / Minus
Query: 384 tccccatgaggcccttgaggaaggggtacaggtggacaatcacccagaacgcaaagaaga 443
||||||| || || |||||||| ||||| || ||||||||||||||||| ||||||||||
Sbjct: 502 tccccattagacctttgaggaatgggtagagatggacaatcacccagaaggcaaagaaga 443
Query: 444 gcttcccgaaaagaggtccccatgactg 471
||||||| || |||||||||||||||||
Sbjct: 442 gcttcccaaatagaggtccccatgactg 415
Score = 69.9 bits (35), Expect = 7e-010
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 608 gccttagaggtgacagtgaagctcgtgtcgataccagcaagcaccttcaggagaccctgg 667
||||| || |||||||||||| | |||||||||||||| | || ||||| ||||| |||
Sbjct: 281 gccttggatgtgacagtgaagtttgtgtcgataccagctaaaactttcagaagaccttgg 222
Query: 668 aagacggcaaataaatgcgcagaaataccaccaatgacccagaactgctcgttcctccac 727
| || ||||| | || || || | |||||| || |||||||| |||||||| ||||||
Sbjct: 221 acaacagcaaagaggtgagctgatacaccacctataacccagaattgctcgtttctccac 162
Query: 728 cattcatcaatgccaacaccactccacctcatctcaaggataccagtggcaaagattga 786
||||| ||||||| || || ||||| || | |||||| ||||| || | |||||||||
Sbjct: 161 cattcctcaatgcttactccgctccatcttaactcaagaatacccgttgaaaagattga 103
Score = 52.0 bits (26), Expect = 2e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 518 aggttgatgatcaaaatagtggttggtgggatcagaagcgttgtccactt 567
||||||||||| || ||||||||||| ||||| || || |||||||||||
Sbjct: 368 aggttgatgattaagatagtggttggagggataagcagggttgtccactt 319
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 432,251
Number of Sequences: 369679
Number of extensions: 432251
Number of successful extensions: 120255
Number of sequences better than 0.5: 161
Number of HSP's better than 0.5 without gapping: 160
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 119577
Number of HSP's gapped (non-prelim): 609
length of query: 3727
length of database: 203,408,664
effective HSP length: 20
effective length of query: 3707
effective length of database: 196,015,084
effective search space: 726627916388
effective search space used: 726627916388
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)