BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2430946.2.3
(3896 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY162181.1| Populus tremuloides cellulose synthase (CesA... 646 0.0
gb|AJ779545.1|AJ779545 AJ779545 Populus euphratica root 3-6... 436 e-120
gb|AJ779945.1|AJ779945 AJ779945 Populus euphratica root 3-6... 424 e-116
gb|BU823358.1|BU823358 UB51DPD11 Populus tremula cambium cD... 387 e-105
gb|AJ778214.1|AJ778214 AJ778214 Populus euphratica root 3-6... 363 3e-098
gb|CK107258.1|CK107258 UB51DPD11.5pR Populus active cambium... 325 7e-087
gb|AY196961.1| Populus tremuloides cellulose synthase 6 (Ce... 206 5e-051
gb|AJ778476.1|AJ778476 AJ778476 Populus euphratica cambium ... 194 2e-047
gb|DV466097.1|DV466097 MTUNUL1.P47.C03 NUL Populus fremonti... 194 2e-047
gb|CA925680.1|CA925680 MTU7TL.P4.E11 Aspen leaf cDNA Librar... 186 4e-045
gb|CV130875.1|CV130875 X9SP07b02 Populus stem seasonal libr... 157 4e-036
gb|AY055724.2| Populus tremuloides cellulose synthase (CesA... 151 2e-034
gb|CB239511.1|CB239511 RSH12F10 two-month-old roots from cl... 149 9e-034
gb|AJ771596.1|AJ771596 AJ771596 Populus euphratica root 3-6... 145 1e-032
gb|DT473511.1|DT473511 WS01229.BR_N17 PT-GT-FL-A-3 Populus ... 143 6e-032
gb|CA931952.1|CA931952 MTU4TA.P25.A10 Aspen apex cDNA Libra... 139 9e-031
gb|DT500468.1|DT500468 PX0015.BR_I21 PT-X-FL-A-1 Populus tr... 137 4e-030
gb|CA932078.1|CA932078 MTU4TA.P26.F03 Aspen apex cDNA Libra... 131 2e-028
gb|CF235713.1|CF235713 PtaJXT0026B7B0703 Poplar cDNA librar... 129 9e-028
gb|DT500162.1|DT500162 PX0011.BR_G15 PT-X-FL-A-1 Populus tr... 129 9e-028
gb|CK320732.1|CK320732 X9SP01b11 Populus stem seasonal libr... 121 2e-025
gb|AY095297.1| Populus tremuloides cellulose synthase (CesA... 121 2e-025
gb|BP924070.1|BP924070 BP924070 full-length enriched poplar... 115 1e-023
gb|DT476519.1|DT476519 WS01229.B21_N17 PT-GT-FL-A-3 Populus... 115 1e-023
gb|AY162180.1| Populus tremuloides cellulose synthase (CesA... 109 8e-022
gb|DT493063.1|DT493063 WS02553.C21_E11 PT-MB-N-A-15 Populus... 107 3e-021
gb|DT509821.1|DT509821 WS02424.BR_N10 PTxD-ICC-N-A-14 Popul... 107 3e-021
gb|DN495393.1|DN495393 N041C05.5pR Populus bark cDNA librar... 105 1e-020
gb|CN549808.1|CN549808 GQ0241.B3_H11 GQ024 Populus trichoca... 103 5e-020
gb|CV244615.1|CV244615 WS0255.B21_C09 PT-MB-N-A-15 Populus ... 103 5e-020
gb|DT489371.1|DT489371 WS02542.B21_A18 PT-MB-N-A-15 Populus... 103 5e-020
gb|BU815407.1|BU815407 N041C05 Populus bark cDNA library Po... 101 2e-019
gb|AY573574.1| Populus tremula x Populus tremuloides cellul... 100 8e-019
gb|CA927446.1|CA927446 MTU6CR.P9.B04 Aspen root cDNA Librar... 96 1e-017
gb|CV242542.1|CV242542 WS02515.B21_F16 PT-MB-N-A-15 Populus... 96 1e-017
gb|CA930801.1|CA930801 MTU2TA.P10.D08 Aspen apex cDNA Libra... 94 5e-017
gb|CF233490.1|CF233490 PtaJXO0024C12C1206 Poplar cDNA libra... 94 5e-017
gb|AJ777820.1|AJ777820 AJ777820 Populus euphratica root 3-6... 92 2e-016
gb|AY573575.1| Populus tremula x Populus tremuloides cellul... 90 8e-016
gb|CX169886.1|CX169886 G10_69-94_14.ab1 leaf inoculated wit... 88 3e-015
gb|AY573572.1| Populus tremula x Populus tremuloides cellul... 88 3e-015
gb|BU895617.1|BU895617 X028D07 Populus wood cDNA library Po... 86 1e-014
gb|CN519879.1|CN519879 GQ0108.B3_I06 GQ010 Populus trichoca... 86 1e-014
gb|DV465848.1|DV465848 MTUNUL1.P43.H11 NUL Populus fremonti... 86 1e-014
gb|DV466748.1|DV466748 MTUNUL1.P9.G02 NUL Populus fremontii... 86 1e-014
gb|CF232837.1|CF232837 PtaJXO0016D5D0507 Poplar cDNA librar... 84 5e-014
gb|AF081534.1|AF081534 Populus x canescens cellulose syntha... 84 5e-014
gb|AF527387.1| Populus tremuloides xylem-specific cellulose... 84 5e-014
gb|AY573571.1| Populus tremula x Populus tremuloides cellul... 84 5e-014
gb|AI162302.1|AI162302 A015P47U Hybrid aspen plasmid librar... 80 7e-013
gb|BU817734.1|BU817734 UA20CPD09 Populus tremula cambium cD... 80 7e-013
gb|CV227790.1|CV227790 WS0168.B21_D13 PT-DX-A-7 Populus tri... 78 3e-012
gb|CN520281.1|CN520281 GQ0105.B3_A14 GQ010 Populus trichoca... 76 1e-011
gb|CV234604.1|CV234604 WS01215.B21.1_I11 PT-GT-FL-A-3 Popul... 76 1e-011
gb|CF234438.1|CF234438 Ptajxojxo2F10F1012 Poplar cDNA libra... 74 4e-011
gb|AF072131.1|AF072131 Populus tremuloides secondary xylem ... 74 4e-011
gb|DQ004570.1| Populus tomentosa cellulose synthase (cesa1)... 74 4e-011
gb|CA926289.1|CA926289 MTU6CR.P13.C05 Aspen root cDNA Libra... 72 2e-010
gb|CF227502.1|CF227502 PtaD6G2G0214 Poplar cDNA library fro... 72 2e-010
gb|CF229283.1|CF229283 PtaXM0023E4E0410 Poplar cDNA library... 72 2e-010
gb|BP923622.1|BP923622 BP923622 full-length enriched poplar... 72 2e-010
gb|BP927588.1|BP927588 BP927588 full-length enriched poplar... 72 2e-010
gb|AI163338.1|AI163338 A040P09U Hybrid aspen plasmid librar... 70 7e-010
gb|BI127228.1|BI127228 G057P27Y Populus cambium cDNA librar... 70 7e-010
gb|BI131187.1|BI131187 G116P69Y Populus cambium cDNA librar... 70 7e-010
gb|CK092703.1|CK092703 G092P25.3pR Populus tension wood cDN... 70 7e-010
gb|CK102806.1|CK102806 G092P25.5pR Populus tension wood cDN... 70 7e-010
gb|AY573573.2| Populus tremula x Populus tremuloides cellul... 70 7e-010
gb|CN524693.1|CN524693 GQ015M08.T3_H02 GQ015 Populus tricho... 68 3e-009
gb|CV229552.1|CV229552 WS01913.B21_K14 PT-DX-N-A-10 Populus... 68 3e-009
gb|CV268371.1|CV268371 WS0205.B21_E18 PTxN-IB-N-A-11 Populu... 68 3e-009
gb|DT493580.1|DT493580 WS0111.BR_M17 PT-P-FL-A-2 Populus tr... 68 3e-009
gb|CK100621.1|CK100621 C057P32.5pR Populus strain T89 leave... 66 1e-008
gb|CN549469.1|CN549469 GQ0241.B3_B20 GQ024 Populus trichoca... 66 1e-008
gb|CK319325.1|CK319325 X9P09e02 Populus stem seasonal libra... 66 1e-008
gb|CV283069.1|CV283069 WS0186.B21_F15 PTxD-IL-N-A-9 Populus... 66 1e-008
gb|DT470299.1|DT470299 WS01920.C21_H07 PT-DX-N-A-10 Populus... 66 1e-008
gb|CK097446.1|CK097446 UB51DPD11.3pR Populus active cambium... 62 2e-007
gb|CV262834.1|CV262834 WS0202.B21_K05 PTxN-IB-N-A-11 Populu... 62 2e-007
gb|CV282433.1|CV282433 WS0184.B21_J19 PTxD-IL-N-A-9 Populus... 62 2e-007
gb|CV273968.1|CV273968 WS01712.B21_M13 PTxD-NR-A-8 Populus ... 60 7e-007
gb|CA926496.1|CA926496 MTU6CR.P15.F11 Aspen root cDNA Libra... 58 3e-006
gb|CA926817.1|CA926817 MTU6CR.P1.E04 Aspen root cDNA Librar... 58 3e-006
gb|CK107777.1|CK107777 G057P27 Populus tension wood cDNA li... 58 3e-006
gb|AJ776091.1|AJ776091 AJ776091 Populus euphratica root 3-6... 58 3e-006
gb|BI071413.1|BI071413 C057P32U Populus strain T89 leaves P... 56 1e-005
gb|CF228734.1|CF228734 PtaXM0016G4G0414 Poplar cDNA library... 56 1e-005
gb|CF232388.1|CF232388 PtaJXO0009H2H0216 Poplar cDNA librar... 56 1e-005
gb|CK092951.1|CK092951 G101P46.3pR Populus tension wood cDN... 56 1e-005
gb|AJ774508.1|AJ774508 AJ774508 Populus euphratica shoot 3-... 56 1e-005
gb|CV252662.1|CV252662 PX0015.B21_I21 PT-X-FL-A-1 Populus t... 56 1e-005
gb|CX175098.1|CX175098 F03_69-34_11.ab1 leaf inoculated wit... 56 1e-005
gb|DN485869.1|DN485869 N041C05.3pR Populus bark cDNA librar... 56 1e-005
gb|DT475055.1|DT475055 WS0125.BR_N16 PT-GT-FL-A-3 Populus t... 56 1e-005
gb|DT475135.1|DT475135 WS0126.BR_C03 PT-GT-FL-A-3 Populus t... 56 1e-005
gb|AY330166.1| Populus tremuloides CesA7A-like mRNA, partia... 56 1e-005
gb|CF232701.1|CF232701 PtaJXO0014G1G0113 Poplar cDNA librar... 54 4e-005
gb|CF237106.1|CF237106 Ptajxtjxt2B1B0103 Poplar cDNA librar... 52 2e-004
gb|CK116718.1|CK116718 B016P26 Hybrid aspen plasmid library... 52 2e-004
gb|CN523759.1|CN523759 GQ015M04.T3_A09 GQ015 Populus tricho... 52 2e-004
gb|CK318831.1|CK318831 X9P03h01 Populus stem seasonal libra... 52 2e-004
gb|AF417485.1| Populus tremuloides cellulose synthase (CesA... 52 2e-004
gb|BI132326.1|BI132326 G135P19Y Populus cambium cDNA librar... 50 7e-004
gb|CF216282.1|CF216282 PT1104 Hybrid aspen xylem up-regulat... 50 7e-004
gb|DT469228.1|DT469228 WS01917.C21_C12 PT-DX-N-A-10 Populus... 50 7e-004
gb|BI128217.1|BI128217 G072P74Y Populus cambium cDNA librar... 48 0.003
gb|BI128439.1|BI128439 G076P02Y Populus cambium cDNA librar... 48 0.003
gb|BU894292.1|BU894292 X005H01 Populus wood cDNA library Po... 48 0.003
gb|BU897587.1|BU897587 X060B01 Populus wood cDNA library Po... 48 0.003
gb|BU897715.1|BU897715 X067B10 Populus wood cDNA library Po... 48 0.003
gb|BU897746.1|BU897746 X067G02 Populus wood cDNA library Po... 48 0.003
gb|CF227527.1|CF227527 PtaXM0001A6A0602 Poplar cDNA library... 48 0.003
gb|CF227669.1|CF227669 PtaXM0003A12A1202 Poplar cDNA librar... 48 0.003
gb|CF228386.1|CF228386 PtaXM0012D12D1208 Poplar cDNA librar... 48 0.003
gb|CF228576.1|CF228576 PtaXM0014G2G0214 Poplar cDNA library... 48 0.003
gb|CF229187.1|CF229187 PtaXM0022D10D1008 Poplar cDNA librar... 48 0.003
gb|CF232848.1|CF232848 PtaJXO0016E6E0610 Poplar cDNA librar... 48 0.003
gb|CF235000.1|CF235000 PtaJXT0017F7F0711 Poplar cDNA librar... 48 0.003
gb|CF235321.1|CF235321 PtaJXT0021D9D0907 Poplar cDNA librar... 48 0.003
gb|CF236447.1|CF236447 PtaJXT2H2H0216 Poplar cDNA library f... 48 0.003
gb|CF236510.1|CF236510 PtaJXT3F6F0612 Poplar cDNA library f... 48 0.003
gb|CF236645.1|CF236645 PtaJXT5D1D0107 Poplar cDNA library f... 48 0.003
gb|CF236856.1|CF236856 PtaJXT8A6A0602 Poplar cDNA library f... 48 0.003
gb|CF237222.1|CF237222 Ptajxtjxt3E10E1010 Poplar cDNA libra... 48 0.003
gb|CK092841.1|CK092841 G097P01.3pR Populus tension wood cDN... 48 0.003
gb|CK102305.1|CK102305 G072P74.5pR Populus tension wood cDN... 48 0.003
gb|CN550567.1|CN550567 GQ0241.B3_I15 GQ024 Populus trichoca... 48 0.003
gb|CK318662.1|CK318662 X9P01h06 Populus stem seasonal libra... 48 0.003
gb|AJ775294.1|AJ775294 AJ775294 Populus euphratica shoot 3-... 48 0.003
gb|AJ775532.1|AJ775532 AJ775532 Populus euphratica shoot 3-... 48 0.003
gb|AJ778410.1|AJ778410 AJ778410 Populus euphratica cambium ... 48 0.003
gb|DT487943.1|DT487943 WS02535.B21_B11 PT-MB-N-A-15 Populus... 48 0.003
gb|AY330165.1| Populus tremuloides CesA5A-like mRNA, partia... 48 0.003
gb|CA929257.1|CA929257 MTU2CA.P11.B08 Aspen apex cDNA Libra... 46 0.010
gb|CA929501.1|CA929501 MTU2CA.P14.F12 Aspen apex cDNA Libra... 46 0.010
gb|CA934196.1|CA934196 MTU3TS.P4.D08 Aspen stem cDNA Librar... 46 0.010
gb|CK091488.1|CK091488 F102P83.3pR Populus flower cDNA libr... 46 0.010
gb|CK102947.1|CK102947 G097P01.5pR Populus tension wood cDN... 46 0.010
gb|CN524029.1|CN524029 GQ015M07.T3_H06 GQ015 Populus tricho... 46 0.010
gb|CN524680.1|CN524680 GQ015M13.T3_D10 GQ015 Populus tricho... 46 0.010
gb|CK318639.1|CK318639 X9P01f01 Populus stem seasonal libra... 46 0.010
gb|CV225435.1|CV225435 WS0161.B21_G07 PT-DX-A-7 Populus tri... 46 0.010
gb|CV225888.1|CV225888 WS0162.B21_K19 PT-DX-A-7 Populus tri... 46 0.010
gb|CV226017.1|CV226017 WS0163.B21_A20 PT-DX-A-7 Populus tri... 46 0.010
gb|CV226195.1|CV226195 WS0163.B21_J02 PT-DX-A-7 Populus tri... 46 0.010
gb|CV227633.1|CV227633 WS0167.B21_M03 PT-DX-A-7 Populus tri... 46 0.010
gb|CV228438.1|CV228438 WS01910.B21_B15 PT-DX-N-A-10 Populus... 46 0.010
gb|DT496937.1|DT496937 WS01125.BR_A04 PT-P-FL-A-2 Populus t... 46 0.010
gb|BI131891.1|BI131891 G127P18Y Populus cambium cDNA librar... 44 0.040
gb|CF228459.1|CF228459 PtaXM0013C2C0206 Poplar cDNA library... 44 0.040
gb|CK088138.1|CK088138 A040P09.3pR Hybrid aspen plasmid lib... 44 0.040
gb|CV231507.1|CV231507 WS0194.B21_M01 PT-DX-N-A-10 Populus ... 44 0.040
gb|AF417486.1| Populus tremuloides cellulose synthase-like ... 44 0.040
gb|BI128887.1|BI128887 G083P04Y Populus cambium cDNA librar... 42 0.16
gb|BI138295.1|BI138295 F103P02Y Populus flower cDNA library... 42 0.16
gb|BU836690.1|BU836690 T089G02 Populus apical shoot cDNA li... 42 0.16
gb|CF216245.1|CF216245 PT1063 Hybrid aspen xylem up-regulat... 42 0.16
gb|CF232376.1|CF232376 PtaJXO0009G11G1113 Poplar cDNA libra... 42 0.16
gb|CK087778.1|CK087778 A020P56.3pR Hybrid aspen plasmid lib... 42 0.16
gb|CK088982.1|CK088982 A082P73.3pR Hybrid aspen plasmid lib... 42 0.16
gb|CK092990.1|CK092990 G103P13.3pR Populus tension wood cDN... 42 0.16
gb|CV233923.1|CV233923 WS01212.B21_O11 PT-GT-FL-A-3 Populus... 42 0.16
gb|CV244739.1|CV244739 WS0255.B21_H19 PT-MB-N-A-15 Populus ... 42 0.16
gb|CV245000.1|CV245000 WS0256.B21_D13 PT-MB-N-A-15 Populus ... 42 0.16
gb|CV275712.1|CV275712 WS0177.B21_F22 PTxD-NR-A-8 Populus t... 42 0.16
>gb|AY162181.1| Populus tremuloides cellulose synthase (CesA4) mRNA, complete cds
Length = 3640
Score = 646 bits (326), Expect = 0.0
Identities = 955/1162 (82%), Gaps = 2/1162 (0%)
Strand = Plus / Minus
Query: 1743 ccacagcagctcttaacaacaatgttaggttccagatcagcttcagtcaaaacaggatca 1802
||||| || ||||| |||| |||||| ||||||| ||| | || |||||||| ||||||
Sbjct: 2033 ccacaacaactctttacaataatgtttggttccaaatcttcctctgtcaaaactggatca 1974
Query: 1803 tatccatacaaagcctgcctattgaaacagcatcctgttcccacatagactggaccctga 1862
|| ||||||| || |||| ||||||||||| || ||||| ||||| || || |||||
Sbjct: 1973 taaccatacagggcttgccggttgaaacagcaaccagttccaacatacacaggcccctgg 1914
Query: 1863 atgccatctagacctttcatgttgatatcaaagaagactatgttccgattagcatatcga 1922
||||| || ||||| |||| ||||||||||||||| || || || ||||| |||||||||
Sbjct: 1913 atgccgtccagacccttcaagttgatatcaaagaaaacaatattgcgattggcatatcga 1854
Query: 1923 tcgtgcaagtcaatgccatcaaatctttgtggaaattgtacataacaagttttccttcc- 1981
||||||||||||||||||||||| | |||||| || |||| ||| || || ||| ||||
Sbjct: 1853 tcgtgcaagtcaatgccatcaaaacgttgtgggaactgtatatagcatgtcttctttcca 1794
Query: 1982 tagagctggatccatcatgaagcacattgcttctctaagagctttgctgctattgaagta 2041
||| || || ||||||||||| ||||| |||||| |||||||||||||| ||||||||||
Sbjct: 1793 tag-gcagggtccatcatgaaacacatggcttctttaagagctttgctgttattgaagta 1735
Query: 2042 atggtcacaatccacattgagaagataggcaccatttgtcagcacagcagatacacgaat 2101
|| |||||||| || || ||||||||||||||||| ||||| ||||| || || |||||
Sbjct: 1734 gtgatcacaatcgacgttcagaagataggcaccattggtcagtacagctgaaactcgaat 1675
Query: 2102 cagtgcattcattgcaccagccttcttgtgatgctgaaagcctggtctcttttcacgaga 2161
||||||||||||||| || || |||||||||||||| || || |||||||||||||||||
Sbjct: 1674 cagtgcattcattgctccggctttcttgtgatgctggaatccaggtctcttttcacgaga 1615
Query: 2162 gacatagacaagacgtggtaattcatttccatcagtgtcaagcccaccactgtgccccaa 2221
||||| |||||||| |||| ||||||||||| || || ||||| |||||||| || ||
Sbjct: 1614 aacatatacaagacgaggtagctcatttccatccgtatcgagccccccactgtgacctaa 1555
Query: 2222 gaacacctgaatcatgccaggatggtccctagggttattcccaggccaagcagttccatc 2281
||||||||||||||| || || || ||||| || ||||| |||||||| | |||||||||
Sbjct: 1554 gaacacctgaatcattcctgggtgatccctgggattatttccaggccatggagttccatc 1495
Query: 2282 agccatggtccacccctcttcaggcactttctgtgctttggcaacaagggcattgattct 2341
||| ||||| || ||||| |||| || || |||||||||||||| |||||||| |
Sbjct: 1494 ctgcattgtccaaccttcttctggcatcttttgagctttggcaacaagagcattgatccg 1435
Query: 2342 tattttgaattcttcatactctctcttcattgctcgtctttccttaacaaatgaaggttg 2401
| |||||||||||||| ||||| ||||||||||| | || || ||||| ||||| ||
Sbjct: 1434 caccttgaattcttcatattctcttttcattgctcggcgctctttcacaaaagaaggctg 1375
Query: 2402 aattttgtccttcaggtaatctattttttgagcaaagtaaaattctggagctcttggttc 2461
|| ||||||| || ||||| || ||||| ||||| ||||| || || || || || ||
Sbjct: 1374 tatcttgtcctctagataatccatcttttgggcaaaataaaactcaggggccctaggctc 1315
Query: 2462 aatattgtgcttcttacaaaagggaacccactttctagcaaattcggcagtttcagagag 2521
||||||||||||||| ||| | | || ||| || || || || ||||||||||| ||
Sbjct: 1314 aatattgtgcttcttgcaagaaaggcgcctcttccttgcgaactccgcagtttcagaaag 1255
Query: 2522 agactcaaaagtcagcatagctgagccatcatcagaaacatagcatgacactttgtcaac 2581
| ||||| |||| ||||||||| |||||||| |||||||||||||| |||||||| ||
Sbjct: 1254 ggcttcaaatgtcaacatagctgaaccatcatctgaaacatagcatgatactttgtcgac 1195
Query: 2582 agggtaatccacagcaagaatggacaaaacagtgttggctgtgatcagtggaggttcctt 2641
||||||||| ||||||||||||||||| |||||||| ||||| | | |||||||| ||
Sbjct: 1194 agggtaatcaacagcaagaatggacaacacagtgtttgctgttacaataggaggttcttt 1135
Query: 2642 caatggatccactgtactgacaaagacatcaatgggagccagctgtgatggctctccctc 2701
|| |||||||||||||| ||||||| ||||| ||||| | ||||||||| ||||| ||
Sbjct: 1134 catgggatccactgtactaacaaagatgtcaataggagctaactgtgatggttctccatc 1075
Query: 2702 tctatcatacctcaatgcaagcctgtcgagatatgtctcacggttgattggataccattt 2761
| |||||| || ||||| ||||||||||| || ||||| || ||||| || ||||||
Sbjct: 1074 acgatcatatcttaatgctagcctgtcgaggtaagtctcgcgattgataggcatccattt 1015
Query: 2762 tgggaactgatctagaagccaggacaaggcaaaccagacctcacagataacagatactag 2821
||| |||||||| ||||||||||||||||||||||| | |||||||||||||||| |
Sbjct: 1014 tggaaactgatccagaagccaggacaaggcaaaccaaatctcacagataacagatgtcaa 955
Query: 2822 ccacaatccataagcattacgcactggatgactgatacgatattggaagaagaagcacag 2881
|||||| || || |||| |||||||||| | | ||||||||| |||||||| | ||
Sbjct: 954 ccacaaaccgtatgcatctttcactggatgagttacacgatattgtaagaagaaccccaa 895
Query: 2882 gatgataagacggagaatgatt 2903
|| |||||||| |||||||||
Sbjct: 894 aataataagacgcagaatgatt 873
Score = 192 bits (97), Expect = 7e-047
Identities = 427/537 (79%)
Strand = Plus / Minus
Query: 563 cacccacagtaaggagaagatagatgcaaggaggatggaccaaacgatgacgattgttgg 622
|||||| || |||||||| || || |||||||| || ||||| |||||||| ||||||||
Sbjct: 3216 cacccatagcaaggagaaaatggaggcaaggagaatagaccagacgatgacaattgttgg 3157
Query: 623 cgtgcggttctgcctgcccatgagacccttgaggaaggggtagagatgaaggatcaccca 682
||| || || |||| |||| | |||||||||||| || || | ||| || |||||
Sbjct: 3156 cgtacgattttgccgacccagcaaacccttgaggaaaggatacaaatgggcaatgaccca 3097
Query: 683 gatcgagaagaacagctttccaaagagcggaccccaggattggtagccgctgttaatggc 742
|| | ||||| ||||| |||||||| |||||||| || ||||| || ||||| |||||
Sbjct: 3096 aatagcaaagaagagcttgccaaagagaggaccccatgactggtatccactgtttatggc 3037
Query: 743 atacgaaattcctgccaccattccgaccaggttaatgacaagaacagtggtcggagggat 802
||| || | || ||||| || || |||| ||| | |||| || ||||| ||||||||
Sbjct: 3036 ataggacacaccagccacaatacccaccatgtttagtacaatgactgtggttggagggat 2977
Query: 803 gagcaaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgc 862
||| | | ||||| ||||||||||| ||||| ||||| || ||||| |||||||||||
Sbjct: 2976 gagaagagatgtccatttgaacacataaagctctgcaaaatccccatcttcatcagatgc 2917
Query: 863 ctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccctggaa 922
|||||| || || ||||||||||||||||| || || | ||| |||| || || || ||
Sbjct: 2916 ctttgaagtgacagtgaagttggtatcaatacctgcaagcaccttcaaaagtccttgaaa 2857
Query: 923 caccgcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctccacca 982
|| || |||||||| || || || |||||||| ||||| || || ||||| ||||||||
Sbjct: 2856 gacggcaaagagatgagctgatgtaccaccaatgacccagaattgttcattcctccacca 2797
Query: 983 atcttcaatgccaacaccactccatctgagctccaatataccagtggcgaaaatggaggc 1042
|||||||| ||||| ||||||||||| ||||| | ||| ||||| || |||||||||
Sbjct: 2796 gtcttcaataccaactccactccatctaagctcaagtattccagtagcaaaaatggagat 2737
Query: 1043 gaaaagaagaatgaagaacattccagcataattactaatctcaggaatgataaattt 1099
|||||| |||||||| |||| | ||||| ||||| ||||||||||| ||||||||
Sbjct: 2736 gaaaagcagaatgaaccacatgctggcatagttacttatctcaggaataataaattt 2680
Score = 170 bits (86), Expect = 3e-040
Identities = 268/326 (82%), Gaps = 2/326 (0%)
Strand = Plus / Minus
Query: 1170 atggtgttaatgtaagccagcctctccaaaagcttcaatcgcccattgtagccataccat 1229
||||| ||||| || || ||||||||||||||||| |||| |||||||| |||||||||
Sbjct: 2609 atggtattaatatatgctagcctctccaaaagctttaatcttccattgtatccataccat 2550
Query: 1230 ataggacaatgtctgctaagcagaatttccactga-cccaagagcccaacggagcacctg 1288
|| || ||||| ||||| || | ||| || | || |||||| ||||| || || |||||
Sbjct: 2549 atggggcaatgcctgctcagtaaaatctcaatagatcccaag-gcccatcgaagaacctg 2491
Query: 1289 attaagacgatcagaaagattgataggtgcagaacccttgaaacaaggtcgtggtggcat 1348
|| | ||||||||||||||| ||||| ||||| ||||| || || || || |||||
Sbjct: 2490 gttcaaacgatcagaaagattaataggagcagaccccttaaatgctgggcgaggaggcat 2431
Query: 1349 gcagtagattgattgccagcctcttgcatgcattttaaacccagtcagaatatcctctgt 1408
||| ||||||||| ||| || | |||||||| ||||||||||||| |||||| |||||
Sbjct: 2430 gcaatagattgatatccaaccacgagcatgcatcttaaacccagtcaaaatatcttctgt 2371
Query: 1409 aactgaaccatagatccagccaatctcttttccccattcagttttgtcctcgtacccaca 1468
||| || ||||||||||| ||||||||||| |||||||||| ||||| || || |||||
Sbjct: 2370 aacagacccatagatccatccaatctctttggcccattcagtcttgtcttcatatccaca 2311
Query: 1469 gctgataacatggatagcttccttca 1494
||| ||||||||||||||||| ||||
Sbjct: 2310 gctaataacatggatagcttctttca 2285
Score = 65.9 bits (33), Expect = 1e-008
Identities = 174/221 (78%)
Strand = Plus / Minus
Query: 2949 cggctcaaaggtaggcgtgcatcatcaaccatttgcatatcttctccatttgagccagtc 3008
|||||||||||| | || ||||||||| ||||||| | || ||||||||||| |||||
Sbjct: 827 cggctcaaaggttgtcgagcatcatcagccatttgaagttcatctccatttgaaccagtg 768
Query: 3009 ccctccatgtctcctctagcctctggatatttattagtcacttgcaacatatttttgtcc 3068
|| || ||||| || | | || || ||| | || |||| |||| ||||||||||||
Sbjct: 767 ccttctatgtccccctttccttcagggtatctgttggtcatctgcatgatatttttgtcc 708
Query: 3069 tgtttaaccctccagctctcaactctttctttccagtcaacactattaagcccataggaa 3128
||||||| | |||| | ||||| || || |||||||||| | | ||| ||||| |||
Sbjct: 707 tgtttaagcttccaaccttcaaccctctccttccagtcaatattgccaaggccataagaa 648
Query: 3129 ttcaagtccttcgaggggtccacaatcctcacaggaactgg 3169
||||||||||| || || |||||||| || |||||||||||
Sbjct: 647 ttcaagtcctttgacggatccacaattctaacaggaactgg 607
Score = 54.0 bits (27), Expect = 4e-005
Identities = 177/227 (77%)
Strand = Plus / Minus
Query: 3372 ttgaattcattgtccaggtcatcaacatcttcctcctcatcatcaccatgaactcgaggg 3431
||||| ||||| || || ||||||||||| || || || ||||| |||| ||||||||
Sbjct: 374 ttgaactcattctctagatcatcaacatcatcttcatcctcatctccatccactcgagga 315
Query: 3432 ctacctttctgtctcttgtatctagtcttgcactgagggcagcattggttcccttccttg 3491
|| ||||| || || || |||||||| ||||||||||| | || |||| || ||
Sbjct: 314 ctccctttgtgccttcgatacctagtcttacactgagggcaagactgagtcccatctttt 255
Query: 3492 cgctcgtactcatagcaagggcggcagacagggaaggcacactcattgcaggcaacaaag 3551
| ||| ||||| || ||||| ||||| || ||||| |||||||| ||||| |||||||||
Sbjct: 254 ctctcatactcgtaacaaggacggcaaactgggaaagcacactcgttgcaagcaacaaag 195
Query: 3552 acatcaccagtggctgaaacgccaacagtgtcgccacaaatctggca 3598
| || ||| | ||| ||| |||||| | || ||||||||||||||
Sbjct: 194 atgtcgccattctctgtaactccaacattatccccacaaatctggca 148
>gb|AJ779545.1|AJ779545 AJ779545 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000800003H02F1, mRNA sequence
Length = 713
Score = 436 bits (220), Expect = e-120
Identities = 587/708 (82%), Gaps = 1/708 (0%)
Strand = Plus / Minus
Query: 1863 atgccatctagacctttcatgttgatatcaaagaagactatgttccgattagcatatcga 1922
||||| || ||||| |||| ||||||||||||||| || || || ||||| |||||||||
Sbjct: 712 atgccgtccagacccttcaagttgatatcaaagaaaacaatattgcgattggcatatcga 653
Query: 1923 tcgtgcaagtcaatgccatcaaat-ctttgtggaaattgtacataacaagttttccttcc 1981
|||||||||||||| |||||||| | |||||| || |||||||| || || ||| ||||
Sbjct: 652 tcgtgcaagtcaataccatcaaaaacgttgtgggaactgtacatagcatgtcttctttcc 593
Query: 1982 tagagctggatccatcatgaagcacattgcttctctaagagctttgctgctattgaagta 2041
|| || ||||||||||| ||||| |||||| | |||||||||||| ||||||||||
Sbjct: 592 atatgcagggtccatcatgaaacacatggcttcttttagagctttgctgttattgaagta 533
Query: 2042 atggtcacaatccacattgagaagataggcaccatttgtcagcacagcagatacacgaat 2101
|| |||||||| || || ||||||||||||||||| ||||| ||||| || || |||||
Sbjct: 532 gtgatcacaatcgacgttcagaagataggcaccattggtcagtacagctgaaactcgaat 473
Query: 2102 cagtgcattcattgcaccagccttcttgtgatgctgaaagcctggtctcttttcacgaga 2161
||||||||||||||| || || |||||||||||||| || || |||||||||||||||||
Sbjct: 472 cagtgcattcattgctccggctttcttgtgatgctggaatccaggtctcttttcacgaga 413
Query: 2162 gacatagacaagacgtggtaattcatttccatcagtgtcaagcccaccactgtgccccaa 2221
||||| |||||||| |||| ||||||||||| || || ||||| |||||||| || ||
Sbjct: 412 aacatatacaagacgaggtagctcatttccatctgtatcgagccccccactgtgacctaa 353
Query: 2222 gaacacctgaatcatgccaggatggtccctagggttattcccaggccaagcagttccatc 2281
||||||||| ||||| || || || ||||| || ||||| |||||||| | |||||| ||
Sbjct: 352 gaacacctggatcattcctgggtgatccctgggattatttccaggccacggagttccgtc 293
Query: 2282 agccatggtccacccctcttcaggcactttctgtgctttggcaacaagggcattgattct 2341
||| ||||| || ||||| |||| ||||| |||||||||||||| |||||||| |
Sbjct: 292 ctgcattgtccaaccttcttctggcatcttctgagctttggcaacaagagcattgatccg 233
Query: 2342 tattttgaattcttcatactctctcttcattgctcgtctttccttaacaaatgaaggttg 2401
| |||||||||||||| ||||||||||||||||| | || || ||||| ||||| ||
Sbjct: 232 caccttgaattcttcatattctctcttcattgctcggcgctctttcacaaaagaaggctg 173
Query: 2402 aattttgtccttcaggtaatctattttttgagcaaagtaaaattctggagctcttggttc 2461
|| ||||||||||| ||||| || ||||| | ||| ||||| || || || || || ||
Sbjct: 172 tatcttgtccttcagataatcaatcttttgggaaaaataaaactcgggggccctgggctc 113
Query: 2462 aatattgtgcttcttacaaaagggaacccactttctagcaaattcggcagtttcagagag 2521
||||||||||||||| || || || |||||||| || ||||| || ||||||||||| ||
Sbjct: 112 aatattgtgcttcttgcagaaaggcacccacttccttgcaaactctgcagtttcagaaag 53
Query: 2522 agactcaaaagtcagcatagctgagccatcatcagaaacatagcatga 2569
| |||||| |||| ||||||||| |||||||| ||||||||||||||
Sbjct: 52 ggcctcaaatgtcaacatagctgaaccatcatctgaaacatagcatga 5
>gb|AJ779945.1|AJ779945 AJ779945 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000800009G06F1, mRNA sequence
Length = 735
Score = 424 bits (214), Expect = e-116
Identities = 572/690 (82%), Gaps = 1/690 (0%)
Strand = Plus / Minus
Query: 1890 tcaaagaagactatgttccgattagcatatcgatcgtgcaagtcaatgccatcaaatctt 1949
|||||||| || || || ||||| |||||||||||||||||||||||||||||||| | |
Sbjct: 708 tcaaagaaaacaatattgcgattggcatatcgatcgtgcaagtcaatgccatcaaaacgt 649
Query: 1950 tgtggaaattgtacataacaagttttccttcctagagctggatccatcatgaagc-acat 2008
||||| || |||||||| | || ||| |||| || || ||||||||||| | ||||
Sbjct: 648 tgtgggaactgtacatagcctgtcttctttccatatgcagggtccatcatgaaacnacat 589
Query: 2009 tgcttctctaagagctttgctgctattgaagtaatggtcacaatccacattgagaagata 2068
|||||| | |||||||||||| |||||||||| || |||||||| || || ||||||||
Sbjct: 588 ggcttcttttagagctttgctgttattgaagtagtgatcacaatcgacgttcagaagata 529
Query: 2069 ggcaccatttgtcagcacagcagatacacgaatcagtgcattcattgcaccagccttctt 2128
||||||||| ||||| ||||| || || |||||||||||||||||||| || || |||||
Sbjct: 528 ggcaccattggtcagtacagctgaaactcgaatcagtgcattcattgctccggctttctt 469
Query: 2129 gtgatgctgaaagcctggtctcttttcacgagagacatagacaagacgtggtaattcatt 2188
||||||||| || || ||||||||||||||||| ||||| |||||||| |||| |||||
Sbjct: 468 gtgatgctggaatccaggtctcttttcacgagaaacatatacaagacgaggtagctcatt 409
Query: 2189 tccatcagtgtcaagcccaccactgtgccccaagaacacctgaatcatgccaggatggtc 2248
|||||| || || ||||| |||||||| || ||||||||||| ||||| || || || ||
Sbjct: 408 tccatctgtatcgagccccccactgtgacctaagaacacctggatcattcctgggtgatc 349
Query: 2249 cctagggttattcccaggccaagcagttccatcagccatggtccacccctcttcaggcac 2308
||| || ||||| |||||||| | ||||||||| ||| ||||| || ||||| ||||
Sbjct: 348 cctgggattatttccaggccacggagttccatcctgcattgtccaaccttcttctggcat 289
Query: 2309 tttctgtgctttggcaacaagggcattgattcttattttgaattcttcatactctctctt 2368
||||| |||||||||||||| |||||||| | | |||||||||||||| ||||||||
Sbjct: 288 cttctgagctttggcaacaagagcattgatccgcaccttgaattcttcatattctctctt 229
Query: 2369 cattgctcgtctttccttaacaaatgaaggttgaattttgtccttcaggtaatctatttt 2428
||||||||| | || || ||||| ||||| || || ||||||||||| ||||| || ||
Sbjct: 228 cattgctcggcgctctttcacaaaagaaggctgtatcttgtccttcagataatcaatctt 169
Query: 2429 ttgagcaaagtaaaattctggagctcttggttcaatattgtgcttcttacaaaagggaac 2488
||| | ||| ||||| || || || || || ||||||||||||||||| || || || ||
Sbjct: 168 ttgggaaaaataaaactcgggggccctgggctcaatattgtgcttcttgcagaaaggcac 109
Query: 2489 ccactttctagcaaattcggcagtttcagagagagactcaaaagtcagcatagctgagcc 2548
|||||| || ||||| || ||||||||||| || | ||||| |||| ||||||||| ||
Sbjct: 108 ccacttccttgcaaactctgcagtttcagaaagggcttcaaatgtcaacatagctgaacc 49
Query: 2549 atcatcagaaacatagcatgacactttgtc 2578
|||||| |||||||||||||| ||||||||
Sbjct: 48 atcatctgaaacatagcatgatactttgtc 19
>gb|BU823358.1|BU823358 UB51DPD11 Populus tremula cambium cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 609
Score = 387 bits (195), Expect = e-105
Identities = 489/587 (83%)
Strand = Plus / Minus
Query: 1992 tccatcatgaagcacattgcttctctaagagctttgctgctattgaagtaatggtcacaa 2051
|||||||||| ||||| |||||| |||||||||||||| |||||||||| || ||||||
Sbjct: 597 tccatcatgacacacatggcttctttaagagctttgctgttattgaagtagtgatcacaa 538
Query: 2052 tccacattgagaagataggcaccatttgtcagcacagcagatacacgaatcagtgcattc 2111
|| || || ||||||||||||||||| ||||| ||||| || || |||||||||||||||
Sbjct: 537 tcgacgttcagaagataggcaccattggtcagtacagctgaaactcgaatcagtgcattc 478
Query: 2112 attgcaccagccttcttgtgatgctgaaagcctggtctcttttcacgagagacatagaca 2171
||||| || || |||||||||||||| || || || |||||||||||||| ||||| |||
Sbjct: 477 attgctccggctttcttgtgatgctggaatccaggcctcttttcacgagatacatataca 418
Query: 2172 agacgtggtaattcatttccatcagtgtcaagcccaccactgtgccccaagaacacctga 2231
||||| |||| ||||||||||| || || ||||| || ||||| || |||||||||||
Sbjct: 417 agacgaggtagctcatttccatccgtatcgagccccccgctgtgacctaagaacacctgg 358
Query: 2232 atcatgccaggatggtccctagggttattcccaggccaagcagttccatcagccatggtc 2291
||||| || || || ||||| || ||||| |||||||| | ||||||||| ||| |||
Sbjct: 357 atcattcctgggtgatccctgggattatttccaggccatggagttccatcctgcattgtc 298
Query: 2292 cacccctcttcaggcactttctgtgctttggcaacaagggcattgattcttattttgaat 2351
|| || ||||| |||| ||||| |||||||||||||| |||||||| | | ||||||
Sbjct: 297 caaccttcttctggcatcttctgagctttggcaacaagagcattgatccgcaccttgaat 238
Query: 2352 tcttcatactctctcttcattgctcgtctttccttaacaaatgaaggttgaattttgtcc 2411
|||||||| ||||||||||||||||| | || || ||||| ||||| || || ||||||
Sbjct: 237 tcttcatattctctcttcattgctcggcgctctttcacaaaagaaggctgtatcttgtcc 178
Query: 2412 ttcaggtaatctattttttgagcaaagtaaaattctggagctcttggttcaatattgtgc 2471
||||| ||||| || ||||| ||||| ||||| || || || || || ||||||||||||
Sbjct: 177 ttcagataatcaatcttttgggcaaaataaaactcaggggccctaggctcaatattgtgc 118
Query: 2472 ttcttacaaaagggaacccactttctagcaaattcggcagtttcagagagagactcaaaa 2531
||||| || || || |||||||| || ||||| || ||||||||||| || | |||||
Sbjct: 117 ttcttgcagaaaggcacccacttccttgcaaactccgcagtttcagaaagggcttcaaac 58
Query: 2532 gtcagcatagctgagccatcatcagaaacatagcatgacactttgtc 2578
|||| ||||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 57 gtcaacatagctgaaccatcatctgaaacatagcatgatactttgtc 11
>gb|AJ778214.1|AJ778214 AJ778214 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400040H10F1, mRNA sequence
Length = 612
Score = 363 bits (183), Expect = 3e-098
Identities = 487/587 (82%), Gaps = 1/587 (0%)
Strand = Plus / Minus
Query: 1992 tccatcatgaagcacattgcttctctaagagctttgctgctattgaagtaatggtcacaa 2051
||||||||||| ||||| |||||| | |||||||| ||| |||||||||| || ||||||
Sbjct: 602 tccatcatgaaacacatggcttct-tgagagctttactgttattgaagtagtgatcacaa 544
Query: 2052 tccacattgagaagataggcaccatttgtcagcacagcagatacacgaatcagtgcattc 2111
|| ||||| |||||||| |||||||| ||||| ||||| || || ||||||| ||||||
Sbjct: 543 tcgacattcagaagataagcaccattggtcagtacagctgaaactcgaatcaacgcattc 484
Query: 2112 attgcaccagccttcttgtgatgctgaaagcctggtctcttttcacgagagacatagaca 2171
||||| || || |||||||||||||| || || |||||||||||||| || ||||| |||
Sbjct: 483 attgctccggctttcttgtgatgctggaatccaggtctcttttcacgggaaacatataca 424
Query: 2172 agacgtggtaattcatttccatcagtgtcaagcccaccactgtgccccaagaacacctga 2231
|| || |||| ||||||||||| ||||||||||| |||||||| ||||| ||||||||
Sbjct: 423 agtcgaggtagctcatttccatccgtgtcaagccccccactgtgacccaaaaacacctgg 364
Query: 2232 atcatgccaggatggtccctagggttattcccaggccaagcagttccatcagccatggtc 2291
||||| || || || ||||| || ||||| |||||||| | ||||||||| ||| |||
Sbjct: 363 atcattcctgggtgatcccttggattatttccaggccatggagttccatcctgcatcgtc 304
Query: 2292 cacccctcttcaggcactttctgtgctttggcaacaagggcattgattcttattttgaat 2351
|| || |||||||||| ||||| |||||||||||||| |||||||||| | ||||||
Sbjct: 303 caaccttcttcaggcatcttctgagctttggcaacaagagcattgattcgcaccttgaat 244
Query: 2352 tcttcatactctctcttcattgctcgtctttccttaacaaatgaaggttgaattttgtcc 2411
|||||||| ||||||||||||||||| | || || ||||| ||||| || || ||||||
Sbjct: 243 tcttcatattctctcttcattgctcggcgctctttgacaaaagaaggctgtatcttgtcc 184
Query: 2412 ttcaggtaatctattttttgagcaaagtaaaattctggagctcttggttcaatattgtgc 2471
||||| ||||| || ||||| ||||| ||||| || || || || || |||||| |||||
Sbjct: 183 ttcagataatcaatcttttgggcaaaataaaactcaggggccctaggctcaatactgtgc 124
Query: 2472 ttcttacaaaagggaacccactttctagcaaattcggcagtttcagagagagactcaaaa 2531
||||| || || || |||||||| || ||||| || ||||||||||| || | |||||
Sbjct: 123 ttcttgcagaaaggcacccacttccttgcaaactccgcagtttcagaaagggcttcaaat 64
Query: 2532 gtcagcatagctgagccatcatcagaaacatagcatgacactttgtc 2578
|||| ||| ||||| |||||||| || ||||||||||| ||||||||
Sbjct: 63 gtcaacattgctgaaccatcatctgagacatagcatgatactttgtc 17
>gb|CK107258.1|CK107258 UB51DPD11.5pR Populus active cambium cDNA library Populus tremula
cDNA clone UB51DPD11 5', mRNA sequence
Length = 596
Score = 325 bits (164), Expect = 7e-087
Identities = 493/596 (82%), Gaps = 5/596 (0%)
Strand = Plus / Minus
Query: 1995 atcatgaagcacattgcttctctaagagctttgctgctattgaagtaatggtcacaatcc 2054
|||||||| ||||| |||||| |||||||||||||| |||||||||| || ||||||||
Sbjct: 596 atcatgaaacacatggcttctttaagagctttgctgttattgaagtagtgatcacaatcg 537
Query: 2055 acattgagaagataggcaccatttgtcagcacagca-gatacacgaatcagtgcattcat 2113
|| || ||||||||||||||||| ||||| ||||| || || |||||||||||||||||
Sbjct: 536 acgttcagaagataggcaccattggtcagtacagcgtgaaactcgaatcagtgcattcat 477
Query: 2114 tgcaccagccttcttgtga-tgctgaaagcctggtctcttttcacgagaga-catagaca 2171
||| || || ||||| ||| ||||| || || || |||||||||||||| | |||| |||
Sbjct: 476 tgctccggctttcttttgaatgctggaatccaggcctcttttcacgagataacatataca 417
Query: 2172 agacgtggtaattcatttccatcagtgtcaagcccaccactgtgccccaagaacacctga 2231
||||| |||| ||||||||||| || || ||||| || ||||| || |||||||||||
Sbjct: 416 agacgaggtagctcatttccatccgtatcgagccccccgctgtgacctaagaacacctgg 357
Query: 2232 atcatgccaggatggtccctagggttattcccaggccaagcagttccatcagc-catggt 2290
||||| || || || ||||| || ||||| |||||||| | ||||||||| | ||| ||
Sbjct: 356 atcattcctgggtgatccctgggattatttccaggccatggagttccatccgtgcattgt 297
Query: 2291 ccacccctcttcaggcactttctgtgctttggcaacaagggcattgattcttattttgaa 2350
||| || ||||| |||| ||||| |||||||||||||| |||||||| | | |||||
Sbjct: 296 ccaaccttcttctggcatcttctgagctttggcaacaagagcattgatccgcaccttgaa 237
Query: 2351 ttcttcatactctctcttcattgctcgtctttccttaacaaatgaaggttgaattttgtc 2410
||||||||| ||||||||||||||||| | || || ||||| ||||| || || |||||
Sbjct: 236 ttcttcatattctctcttcattgctcggcgctctttcacaaaagaaggctgtatcttgtc 177
Query: 2411 cttcaggtaatctattttttgagcaaagtaaaattctggagctcttggttcaatattgtg 2470
|||||| ||||| || ||||| ||||| ||||| || || || || || |||||||||||
Sbjct: 176 cttcagataatcaatcttttgggcaaaataaaactcaggggccctaggctcaatattgtg 117
Query: 2471 cttcttacaaaagggaacccactttctagcaaattcggcagtttcagagagagactcaaa 2530
|||||| || || || |||||||| || ||||| || ||||||||||| || | |||||
Sbjct: 116 cttcttgcagaaaggcacccacttccttgcaaactccgcagtttcagaaagggcttcaaa 57
Query: 2531 agtcagcatagctgagccatcatc-agaaacatagcatgacactttgtcaacaggg 2585
|||| ||||||||| |||||||| |||||||||||||| |||||||| ||||||
Sbjct: 56 cgtcaacatagctgaaccatcatcttgaaacatagcatgatactttgtcgacaggg 1
>gb|AY196961.1| Populus tremuloides cellulose synthase 6 (CesA6) mRNA, complete cds
Length = 3773
Score = 206 bits (104), Expect = 5e-051
Identities = 464/584 (79%)
Strand = Plus / Minus
Query: 1860 tgaatgccatctagacctttcatgttgatatcaaagaagactatgttccgattagcatat 1919
||||||||||||| |||| |||| |||||||||||||| || | ||||| || ||||||
Sbjct: 1947 tgaatgccatctaaacctctcatattgatatcaaagaatacagtattccggttggcatat 1888
Query: 1920 cgatcgtgcaagtcaatgccatcaaatctttgtggaaattgtacataacaagttttcctt 1979
||||| | ||||||||||||||| || ||||| || || ||||| || | || |
Sbjct: 1887 cgatcactcctgtcaatgccatcaaacctctgtgggaactggacatagcacactctcttc 1828
Query: 1980 cctagagctggatccatcatgaagcacattgcttctctaagagctttgctgctattgaag 2039
|| || ||||||||||||||| |||||||||||||||||||| || ||| |||||| |
Sbjct: 1827 ccaagcaatggatccatcatgaaacacattgcttctctaagagccttactgttattgatg 1768
Query: 2040 taatggtcacaatccacattgagaagataggcaccatttgtcagcacagcagatacacga 2099
|| || |||||||||| ||| | |||||| | | ||||||| ||||| ||||| || |
Sbjct: 1767 tagtgatcacaatccaaattcaaaagatatggagcatttgttagcacggcagagactctg 1708
Query: 2100 atcagtgcattcattgcaccagccttcttgtgatgctgaaagcctggtctcttttcacga 2159
| || |||||||| || |||||||| ||||| || | ||| || ||||||||||| |
Sbjct: 1707 accaaagcattcatagctccagcctttttgtggtgattaaatccaggtctcttttctctg 1648
Query: 2160 gagacatagacaagacgtggtaattcatttccatcagtgtcaagcccaccactgtgcccc 2219
|| ||||| || |||||||||||||| ||||||||||||||| |||| ||||| || ||
Sbjct: 1647 gaaacatataccagacgtggtaattcgtttccatcagtgtcatgccctccactttggcca 1588
Query: 2220 aagaacacctgaatcatgccaggatggtccctagggttattcccaggccaagcagttcca 2279
| ||| ||||||||||| ||||| || || | |||||||||||||| | ||| |||
Sbjct: 1587 aggaaaacctgaatcattccagggtgatcacggacattattcccaggccatggagtacca 1528
Query: 2280 tcagccatggtccacccctcttcaggcactttctgtgctttggcaacaagggcattgatt 2339
|| ||| ||||| || ||||| || || || || || |||||||| | ||||||||
Sbjct: 1527 tcctgcattgtccatccatcttctgggaccttatgagccttggcaaccaaagcattgatc 1468
Query: 2340 cttattttgaattcttcatactctctcttcattgctcgtctttccttaacaaatgaaggt 2399
| ||||| || ||||||||||||||||||||||||| || |||||| ||||||||||
Sbjct: 1467 cgaattttaaactcttcatactctctcttcattgctcttcgttccttgacaaatgaagcc 1408
Query: 2400 tgaattttgtccttcaggtaatctattttttgagcaaagtaaaa 2443
|| | || || ||||| |||||||| ||||||| ||| |||||
Sbjct: 1407 tgcaccttatctttcagataatctatcttttgagaaaaataaaa 1364
Score = 101 bits (51), Expect = 2e-019
Identities = 114/135 (84%)
Strand = Plus / Minus
Query: 2525 ctcaaaagtcagcatagctgagccatcatcagaaacatagcatgacactttgtcaacagg 2584
|||||| ||||||||||| | ||||||||||||||||| ||||| || |||||||||||
Sbjct: 1282 ctcaaatgtcagcatagcagcaccatcatcagaaacataacatgaaaccttgtcaacagg 1223
Query: 2585 gtaatccacagcaagaatggacaaaacagtgttggctgtgatcagtggaggttccttcaa 2644
|||||| || ||||||||||||| ||| ||||| || || | ||| || || || |||||
Sbjct: 1222 gtaatcaactgcaagaatggacagaaccgtgtttgcggtcaccagagggggctctttcaa 1163
Query: 2645 tggatccactgtact 2659
|||||| || |||||
Sbjct: 1162 tggatcaacggtact 1148
Score = 81.8 bits (41), Expect = 2e-013
Identities = 95/113 (84%)
Strand = Plus / Minus
Query: 1377 tgcattttaaacccagtcagaatatcctctgtaactgaaccatagatccagccaatctct 1436
||||||||||| || |||| |||||||||||||| |||||||| ||||| || | ||||
Sbjct: 2448 tgcattttaaagcctgtcaatatatcctctgtaacagaaccataaatccaccctacctct 2389
Query: 1437 tttccccattcagttttgtcctcgtacccacagctgataacatggatagcttc 1489
|| |||||||| ||||| || || || |||||||| || |||||||| |||||
Sbjct: 2388 ttgccccattctgttttatcttcatagccacagctaatgacatggatggcttc 2336
Score = 44.1 bits (22), Expect = 0.040
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 972 tttctccaccaatcttcaatgccaacaccactccatct 1009
||||||||||| || ||||| ||||| |||||||||||
Sbjct: 2853 tttctccaccactcgtcaataccaaccccactccatct 2816
>gb|AJ778476.1|AJ778476 AJ778476 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000600001D07F1, mRNA sequence
Length = 677
Score = 194 bits (98), Expect = 2e-047
Identities = 271/326 (83%), Gaps = 2/326 (0%)
Strand = Plus / Minus
Query: 1170 atggtgttaatgtaagccagcctctccaaaagcttcaatcgcccattgtagccataccat 1229
||||| ||||| || || ||||||||||||||||| |||| |||||||| |||||||||
Sbjct: 343 atggtattaatatatgctagcctctccaaaagctttaatcttccattgtatccataccat 284
Query: 1230 ataggacaatgtctgctaagcagaatttccactga-cccaagagcccaacggagcacctg 1288
|| || ||||| ||||| || | ||| || | || |||||| ||||| || || |||||
Sbjct: 283 atggggcaatgcctgctcagtaaaatctcaatagatcccaag-gcccatcgaagaacctg 225
Query: 1289 attaagacgatcagaaagattgataggtgcagaacccttgaaacaaggtcgtggtggcat 1348
|| | ||||||||||||||||||||| ||||| ||||| || ||| || || |||||
Sbjct: 224 gttcaaacgatcagaaagattgataggagcagagcccttaaatgcagggcgaggaggcat 165
Query: 1349 gcagtagattgattgccagcctcttgcatgcattttaaacccagtcagaatatcctctgt 1408
||| ||||||||| ||| || | |||||||| || |||||||||| |||||| |||||
Sbjct: 164 gcaatagattgatatccaaccacgagcatgcatcttgaacccagtcaaaatatcttctgt 105
Query: 1409 aactgaaccatagatccagccaatctcttttccccattcagttttgtcctcgtacccaca 1468
||| |||||||||||||| ||||||||||| ||||||||||| ||||| || || |||||
Sbjct: 104 aacagaaccatagatccatccaatctctttgccccattcagtcttgtcttcatatccaca 45
Query: 1469 gctgataacatggatagcttccttca 1494
||| ||||||||||||||||| ||||
Sbjct: 44 gctaataacatggatagcttctttca 19
Score = 109 bits (55), Expect = 8e-022
Identities = 211/263 (80%)
Strand = Plus / Minus
Query: 837 gcaaagtcgccatcctcatcagatgcctttgaggtaactgtgaagttggtatcaatccca 896
||||| || ||||| ||||||||||||||||| | || ||||||||||||||||| ||
Sbjct: 676 gcaaaatccccatcttcatcagatgcctttgaagggacagtgaagttggtatcaatacct 617
Query: 897 gccaacactttcagcagaccctggaacaccgcgaagagatgggcagaggtgccaccaata 956
|| | ||| |||| || || || || || || |||| ||| || || || || || ||
Sbjct: 616 gcaagcaccttcaaaagtccttgaaagacggcaaagaaatgagctgatgtaccgccgatg 557
Query: 957 acccaaaactgctcatttctccaccaatcttcaatgccaacaccactccatctgagctcc 1016
||||| || || ||||| |||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 556 acccagaattgttcattcctccaccagtcttcaataccaactccactccatctaagctca 497
Query: 1017 aatataccagtggcgaaaatggaggcgaaaagaagaatgaagaacattccagcataatta 1076
| ||| ||||| || ||||||||| |||||| |||||||| |||| | ||||| |||
Sbjct: 496 agtattccagtagcaaaaatggagatgaaaagcagaatgaaccacatgctggcatagtta 437
Query: 1077 ctaatctcaggaatgataaattt 1099
|| ||||||||||| ||||||||
Sbjct: 436 cttatctcaggaataataaattt 414
>gb|DV466097.1|DV466097 MTUNUL1.P47.C03 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 857
Score = 194 bits (98), Expect = 2e-047
Identities = 260/314 (82%)
Strand = Plus / Minus
Query: 786 acagtggtcggagggatgagcaaactggtccacttgaacacatatagctcagcaaagtcg 845
|||||||| ||||||||||| | | ||||| ||||||||||| ||||| ||||| ||
Sbjct: 369 acagtggttggagggatgagaagagatgtccatttgaacacataaagctctgcaaaatcc 310
Query: 846 ccatcctcatcagatgcctttgaggtaactgtgaagttggtatcaatcccagccaacact 905
||||||||||||||||| ||||| || || ||||||||||||||||| || || | ||||
Sbjct: 309 ccatcctcatcagatgcttttgaagtgacagtgaagttggtatcaatacctgcaagcact 250
Query: 906 ttcagcagaccctggaacaccgcgaagagatgggcagaggtgccaccaataacccaaaac 965
|||| || || ||||| || || |||||||| || || |||||||| || ||||||||
Sbjct: 249 ttcaaaagcccttggaagacagcaaagagatgagctgatgtgccaccgatcacccaaaat 190
Query: 966 tgctcatttctccaccaatcttcaatgccaacaccactccatctgagctccaatatacca 1025
|| ||||| |||||||| |||||||| ||||| ||||||||||| ||||| | ||| |||
Sbjct: 189 tgttcattcctccaccagtcttcaataccaactccactccatctaagctcaagtattcca 130
Query: 1026 gtggcgaaaatggaggcgaaaagaagaatgaagaacattccagcataattactaatctca 1085
|| || || |||||| |||||| |||||||| |||| ||||| || ||||| ||||||
Sbjct: 129 gtagcaaagatggagatgaaaaggagaatgaaccacatgccagcgtagttacttatctca 70
Query: 1086 ggaatgataaattt 1099
||||| ||||||||
Sbjct: 69 ggaataataaattt 56
Score = 48.1 bits (24), Expect = 0.003
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 690 aagaacagctttccaaagagcggacccc 717
||||||||||| ||||||||||||||||
Sbjct: 467 aagaacagcttgccaaagagcggacccc 440
>gb|CA925680.1|CA925680 MTU7TL.P4.E11 Aspen leaf cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 708
Score = 186 bits (94), Expect = 4e-045
Identities = 259/314 (82%)
Strand = Plus / Plus
Query: 786 acagtggtcggagggatgagcaaactggtccacttgaacacatatagctcagcaaagtcg 845
|||||||| ||||||||||| | | ||||| ||||||||||| ||||| ||||| ||
Sbjct: 57 acagtggttggagggatgagaagagatgtccatttgaacacataaagctctgcaaaatcc 116
Query: 846 ccatcctcatcagatgcctttgaggtaactgtgaagttggtatcaatcccagccaacact 905
||||||||||| ||||| ||||| || || |||||||||||||| || || || | ||||
Sbjct: 117 ccatcctcatcggatgcttttgaagtgacagtgaagttggtatcgatacctgcaagcact 176
Query: 906 ttcagcagaccctggaacaccgcgaagagatgggcagaggtgccaccaataacccaaaac 965
|||| || || ||||| || || |||||||| || || |||||||| || ||||| ||
Sbjct: 177 ttcaaaagcccttggaagacagcaaagagatgagctgacgtgccaccgatcacccagaat 236
Query: 966 tgctcatttctccaccaatcttcaatgccaacaccactccatctgagctccaatatacca 1025
|| ||||| |||||||| |||||||| ||||| ||||||||||| ||||| | ||| |||
Sbjct: 237 tgttcattcctccaccagtcttcaataccaactccactccatctaagctcaagtattcca 296
Query: 1026 gtggcgaaaatggaggcgaaaagaagaatgaagaacattccagcataattactaatctca 1085
||||| || |||||| |||||| |||||||| |||| ||||| || ||||||||||||
Sbjct: 297 gtggcaaagatggagatgaaaaggagaatgaaccacatgccagcgtagttactaatctca 356
Query: 1086 ggaatgataaattt 1099
||||| ||||||||
Sbjct: 357 ggaataataaattt 370
Score = 115 bits (58), Expect = 1e-023
Identities = 236/293 (80%), Gaps = 2/293 (0%)
Strand = Plus / Plus
Query: 1146 ggaacagatgtgattggataaacaatggtgttaatgtaagccagcctctccaaaagcttc 1205
|||| |||||| | ||| ||||| ||||| |||||||| || ||||||||||| |||||
Sbjct: 417 ggaagagatgttagtgggtaaacgatggtattaatgtatgctagcctctccaagagcttt 476
Query: 1206 aatcgcccattgtagccataccatataggacaatgtctgctaagcagaatttccactga- 1264
| || ||| |||| ||||||||||| || ||||| ||||| |||| ||| || | ||
Sbjct: 477 agtcttccactgtatccataccatatggggcaatgcctgctcagcaaaatctcaatagat 536
Query: 1265 cccaagagcccaacggagcacctgattaagacgatcagaaagattgataggtgcagaacc 1324
|||||| ||||| || || ||||| || | |||||||||||||||||||| ||||| ||
Sbjct: 537 cccaag-gcccatcgaagaacctggttcaatcgatcagaaagattgataggagcagaccc 595
Query: 1325 cttgaaacaaggtcgtggtggcatgcagtagattgattgccagcctcttgcatgcatttt 1384
||| || || || || |||||||| ||||||||| |||||| | |||||||| ||
Sbjct: 596 cttaaatgctgggcgaggaggcatgcaatagattgatatccagccacgagcatgcatctt 655
Query: 1385 aaacccagtcagaatatcctctgtaactgaaccatagatccagccaatctctt 1437
||||||||| |||||| || ||||| |||||||||||||| ||||||||||
Sbjct: 656 ngacccagtcaaaatatcttcagtaacagaaccatagatccatccaatctctt 708
>gb|CV130875.1|CV130875 X9SP07b02 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 882
Score = 157 bits (79), Expect = 4e-036
Identities = 292/363 (80%)
Strand = Plus / Minus
Query: 1295 acgatcagaaagattgataggtgcagaacccttgaaacaaggtcgtggtggcatgcagta 1354
||||||||||||||||||||| ||||| ||||| | || || || |||||||| ||
Sbjct: 448 acgatcagaaagattgataggagcagaccccttaagtgctgggcgaggaggcatgcaata 389
Query: 1355 gattgattgccagcctcttgcatgcattttaaacccagtcagaatatcctctgtaactga 1414
||||||| ||| || | |||||||| || ||||| |||| |||||| |||||||| ||
Sbjct: 388 gattgatatccaaccacgagcatgcatcttgaacccggtcaaaatatcttctgtaacgga 329
Query: 1415 accatagatccagccaatctcttttccccattcagttttgtcctcgtacccacagctgat 1474
|||||||||||| ||||||||||| ||||||||||| ||||| || || |||||||| ||
Sbjct: 328 accatagatccatccaatctctttgccccattcagtcttgtcttcatatccacagctaat 269
Query: 1475 aacatggatagcttccttcagtagagaagctgggtttgttgaaggtggtatgccaccttg 1534
||||||||||||||| |||| |||| || || || |||| ||||| ||||| || ||
Sbjct: 268 aacatggatagcttctttcaaaagagttgcaggattggttgtcggtggaatgcctccctg 209
Query: 1535 agtcataaaggtggatgcaatgaagattggagactgaccaaagcgtttctccaatttcct 1594
| ||||| | |||||| || | ||| ||||||||||| || || || || || |
Sbjct: 208 ttcctggaaggtagctgcaataaaaactggtgactgaccaaaacgcttttctaaactctt 149
Query: 1595 ctgggacataagcactgacctttcatcctcataaccttcaataccctcctcgatgtcttc 1654
||| |||||||||| |||||| ||||| ||||| ||||||| ||||||||| ||||| ||
Sbjct: 148 ctgtgacataagcagtgacctctcatcatcatatccttcaacaccctcctcaatgtcctc 89
Query: 1655 cat 1657
|||
Sbjct: 88 cat 86
Score = 56.0 bits (28), Expect = 1e-005
Identities = 223/288 (77%)
Strand = Plus / Minus
Query: 563 cacccacagtaaggagaagatagatgcaaggaggatggaccaaacgatgacgattgttgg 622
|||||| || || ||||| || || |||||||| || ||||| |||||||| ||||||||
Sbjct: 837 cacccatagcaacgagaaaatggaggcaaggagaatagaccagacgatgacaattgttgg 778
Query: 623 cgtgcggttctgcctgcccatgagacccttgaggaaggggtagagatgaaggatcaccca 682
||| || || |||| |||| | |||||||||||| || || | ||| || |||||
Sbjct: 777 cgttcgattttgccgacccaacaaacccttgaggaaaggatacaaatgggcaatgaccca 718
Query: 683 gatcgagaagaacagctttccaaagagcggaccccaggattggtagccgctgttaatggc 742
|| | ||||| ||||| |||||||| |||||||| || ||||| || ||||| |||||
Sbjct: 717 aatagcaaagaagagcttgccaaagagaggaccccatgactggtatccactgtttatggc 658
Query: 743 atacgaaattcctgccaccattccgaccaggttaatgacaagaacagtggtcggagggat 802
||| || | || ||||| || || |||| ||| | | || || ||||||||||||||
Sbjct: 657 ataggacacgccagccacaatacccaccatgtttagtaaaatgactgtggtcggagggat 598
Query: 803 gagcaaactggtccacttgaacacatatagctcagcaaagtcgccatc 850
||| | | ||||| ||||||||||| ||||| ||||| || |||||
Sbjct: 597 gagaagagatgtccatttgaacacatagagctctgcaaaatccccatc 550
>gb|AY055724.2| Populus tremuloides cellulose synthase (CesA5) mRNA, complete cds
Length = 3532
Score = 151 bits (76), Expect = 2e-034
Identities = 400/508 (78%)
Strand = Plus / Minus
Query: 2073 ccatttgtcagcacagcagatacacgaatcagtgcattcattgcaccagccttcttgtga 2132
||||| || ||||| || |||||||||| |||| |||||| |||||||| ||||||||
Sbjct: 1884 ccattagttagcacggctgatacacgaacaagtgaattcatggcaccagctttcttgtgg 1825
Query: 2133 tgctgaaagcctggtctcttttcacgagagacatagacaagacgtggtaattcatttcca 2192
||||| ||||| || | |||||||||||| ||||| || | || || | ||||| |||
Sbjct: 1824 tgctggaagccaggacgcttttcacgagaaacataaactaaccgcggaagctcattacca 1765
Query: 2193 tcagtgtcaagcccaccactgtgccccaagaacacctgaatcatgccaggatggtcccta 2252
|||| |||||||| ||||| || |||||||| ||||||||||| || |||||||| ||
Sbjct: 1764 tcagaatcaagccctccactttggcccaagaaaacctgaatcattcctggatggtctctg 1705
Query: 2253 gggttattcccaggccaagcagttccatcagccatggtccacccctcttcaggcactttc 2312
| |||||| |||||||| | || ||||| ||| |||| || ||||||||||| ||
Sbjct: 1704 gtgttatttccaggccatggggtcccatcttgcataatccatccttcttcaggcaccttt 1645
Query: 2313 tgtgctttggcaacaagggcattgattcttattttgaattcttcatactctctcttcatt 2372
|| || ||||||||||| ||||||| | ||||| ||||||||||| |||||||||||
Sbjct: 1644 tgcgccttggcaacaagcccattgatacgaattttaaattcttcatattctctcttcata 1585
Query: 2373 gctcgtctttccttaacaaatgaaggttgaattttgtccttcaggtaatctattttttga 2432
|||| | || || ||||| || || || | ||| ||||||| ||| || || |||||
Sbjct: 1584 gctctacggtctttgacaaaagatggctgcactttatccttcaagtagtcaatcttttgt 1525
Query: 2433 gcaaagtaaaattctggagctcttggttcaatattgtgcttcttacaaaagggaacccac 2492
|||||||| |||||||||| | || ||||| ||| |||||| || ||||| |||||
Sbjct: 1524 gcaaagtaccattctggagcccgaggctcaatgctgtacttcttgcagaagggcacccat 1465
Query: 2493 tttctagcaaattcggcagtttcagagagagactcaaaagtcagcatagctgagccatca 2552
|| || | ||| || | ||| ||||| | || ||||| |||| ||| || | ||||||
Sbjct: 1464 ttcctggaaaactctgaagtctcagacaaagcttcaaatgtcaacattgcagcaccatca 1405
Query: 2553 tcagaaacatagcatgacactttgtcaa 2580
||||| ||||||||||| ||||||||||
Sbjct: 1404 tcagagacatagcatgagactttgtcaa 1377
Score = 111 bits (56), Expect = 2e-022
Identities = 101/116 (87%)
Strand = Plus / Minus
Query: 1374 gcatgcattttaaacccagtcagaatatcctctgtaactgaaccatagatccagccaatc 1433
|||||||| ||||||||||| |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 2595 gcatgcatcttaaacccagtaagaatatcttctgtaacagaaccatagatccatccaatc 2536
Query: 1434 tcttttccccattcagttttgtcctcgtacccacagctgataacatggatagcttc 1489
|| |||||| || ||||||||||| |||||||| || || ||||| ||||||||
Sbjct: 2535 tcagatccccaatctgttttgtcctcatacccacaactaatgacatgaatagcttc 2480
Score = 87.7 bits (44), Expect = 3e-015
Identities = 170/212 (80%)
Strand = Plus / Minus
Query: 813 gtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgcctttgaggta 872
||||| ||||||| ||||| |||||| | || || ||||| || |||||||| || |||
Sbjct: 3156 gtccatttgaacaagtatagttcagcagaatcaccgtcctcgtctgatgccttggacgta 3097
Query: 873 actgtgaagttggtatcaatcccagccaacactttcagcagaccctggaacaccgcgaag 932
|| ||||||||||| ||||| ||||| | ||||| |||| || ||||| || || ||
Sbjct: 3096 acagtgaagttggtgtcaatgccagcaagtactttgagcaagccttggaaaacagcaaaa 3037
Query: 933 agatgggcagaggtgccaccaataacccaaaactgctcatttctccaccaatcttcaatg 992
|||||||| || ||||| || ||||||||||| ||||| |||||||| || |||||
Sbjct: 3036 agatgggctgaaacaccaccgatgacccaaaactgttcattcctccaccactcatcaatc 2977
Query: 993 ccaacaccactccatctgagctccaatatacc 1024
|||||||||||||| || | |||||| |||||
Sbjct: 2976 ccaacaccactccacctcatctccaagatacc 2945
Score = 83.8 bits (42), Expect = 5e-014
Identities = 111/134 (82%)
Strand = Plus / Minus
Query: 1833 catcctgttcccacatagactggaccctgaatgccatctagacctttcatgttgatatca 1892
||||| || ||||||||||| || || ||||| ||||| ||||| ||| ||| ||||||
Sbjct: 2124 catccagtacccacatagacaggtccttgaataccatccagacccctcaagtttatatca 2065
Query: 1893 aagaagactatgttccgattagcatatcgatcgtgcaagtcaatgccatcaaatctttgt 1952
||||| || | || ||||| ||||||||||| | | ||||||||||||||||||||||
Sbjct: 2064 aagaatacagtattgcgattggcatatcgatcattcctgtcaatgccatcaaatctttgt 2005
Query: 1953 ggaaattgtacata 1966
||||| || |||||
Sbjct: 2004 ggaaactgaacata 1991
Score = 63.9 bits (32), Expect = 4e-008
Identities = 86/104 (82%)
Strand = Plus / Minus
Query: 1218 tagccataccatataggacaatgtctgctaagcagaatttccactgacccaagagcccaa 1277
||||||||||| || |||||||| | || || |||||||| || || || ||||||||
Sbjct: 2751 tagccataccaaattggacaatgccgactgagaagaatttcaacagaacccagagcccat 2692
Query: 1278 cggagcacctgattaagacgatcagaaagattgataggtgcaga 1321
|| ||||| || || ||||||||||||||||| ||||| |||||
Sbjct: 2691 cgaagcacttggttcagacgatcagaaagattaataggagcaga 2648
Score = 63.9 bits (32), Expect = 4e-008
Identities = 71/84 (84%)
Strand = Plus / Minus
Query: 3428 agggctacctttctgtctcttgtatctagtcttgcactgagggcagcattggttcccttc 3487
|||||||||||| | ||||||||||| || |||||||||||||| | || || || ||
Sbjct: 463 agggctacctttgagcctcttgtatctggttttgcactgagggcaagactgattgccatc 404
Query: 3488 cttgcgctcgtactcatagcaagg 3511
||| | ||||||||||||||||||
Sbjct: 403 cttcctctcgtactcatagcaagg 380
Score = 58.0 bits (29), Expect = 3e-006
Identities = 125/157 (79%)
Strand = Plus / Minus
Query: 562 tcacccacagtaaggagaagatagatgcaaggaggatggaccaaacgatgacgattgttg 621
||||||||| ||||| ||||| || |||||||| || ||||| |||| || || || |
Sbjct: 3407 tcacccacaacaaggaaaagattgaagcaaggagaatagaccacacgacaacaatggtgg 3348
Query: 622 gcgtgcggttctgcctgcccatgagacccttgaggaaggggtagagatgaaggatcaccc 681
| || |||||||| | ||||| | ||| || ||||| || |||||||| | ||||||||
Sbjct: 3347 gtgtccggttctggcgacccatcaaaccttttaggaaaggatagagatggacgatcaccc 3288
Query: 682 agatcgagaagaacagctttccaaagagcggacccca 718
||| | |||||| ||||| |||||||| ||||||||
Sbjct: 3287 agaaagcgaagaaaagcttgccaaagagtggacccca 3251
>gb|CB239511.1|CB239511 RSH12F10 two-month-old roots from clone 'Beaupre' grown for 19 days
under restricted irrigation Populus trichocarpa x Populus
deltoides cDNA 5', mRNA sequence
Length = 606
Score = 149 bits (75), Expect = 9e-034
Identities = 234/287 (81%)
Strand = Plus / Minus
Query: 813 gtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgcctttgaggta 872
||||| ||||||||||| ||||| ||||| || ||||| |||||||| |||||||| ||
Sbjct: 592 gtccatttgaacacataaagctctgcaaaatccccatcttcatcagaagcctttgaagtg 533
Query: 873 actgtgaagttggtatcaatcccagccaacactttcagcagaccctggaacaccgcgaag 932
|| ||||||||||||||||| || || | ||| |||| || || || || || || |||
Sbjct: 532 acagtgaagttggtatcaatacctgcaagcaccttcaaaagtccttgaaagacggcaaag 473
Query: 933 agatgggcagaggtgccaccaataacccaaaactgctcatttctccaccaatcttcaatg 992
||||| || || || ||||| || ||||| || || ||||| |||||||| ||||||||
Sbjct: 472 agatgagctgatgtaccaccgatgacccagaattgttcattcctccaccagtcttcaata 413
Query: 993 ccaacaccactccatctgagctccaatataccagtggcgaaaatggaggcgaaaagaaga 1052
||||| ||||||||||| ||||| | ||| ||||| || ||||||||| |||||| |||
Sbjct: 412 ccaactccactccatctaagctcaagtattccagtagcaaaaatggagatgaaaagcaga 353
Query: 1053 atgaagaacattccagcataattactaatctcaggaatgataaattt 1099
||||| |||| | ||||| ||||| ||||||||||| ||||||||
Sbjct: 352 atgaaccacatgctggcatagttacttatctcaggaataataaattt 306
Score = 63.9 bits (32), Expect = 4e-008
Identities = 129/159 (81%), Gaps = 2/159 (1%)
Strand = Plus / Minus
Query: 1170 atggtgttaatgtaagccagcctctccaaaagcttcaatcgcccattgtagccataccat 1229
||||| ||||| || || ||||||||||||||||| |||| || ||||| |||||||||
Sbjct: 235 atggtattaatatatgctagcctctccaaaagctttaatcttccgttgtatccataccat 176
Query: 1230 ataggacaatgtctgctaagcagaatttccactga-cccaagagcccaacggagcacctg 1288
|| || ||||| ||||| || | ||| || | || ||| || ||||| || || |||||
Sbjct: 175 atggggcaatgcctgctcagtaaaatctcaatagatcccnag-gcccatcgaagaacctg 117
Query: 1289 attaagacgatcagaaagattgataggtgcagaaccctt 1327
|| | ||||||||||||||||||||| ||||| |||||
Sbjct: 116 gttcaaacgatcagaaagattgataggagcagacccctt 78
>gb|AJ771596.1|AJ771596 AJ771596 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600003B06F1, mRNA sequence
Length = 575
Score = 145 bits (73), Expect = 1e-032
Identities = 184/221 (83%)
Strand = Plus / Minus
Query: 1743 ccacagcagctcttaacaacaatgttaggttccagatcagcttcagtcaaaacaggatca 1802
||||| || ||||| |||| |||||| ||||||| ||| | || |||||||| ||||||
Sbjct: 229 ccacaacaactctttacaataatgtttggttccaaatcttcctctgtcaaaactggatca 170
Query: 1803 tatccatacaaagcctgcctattgaaacagcatcctgttcccacatagactggaccctga 1862
|| ||||||| || |||| ||||||||||| || ||||| ||||| || || |||||
Sbjct: 169 taaccatacagggcttgccggttgaaacagcaaccagttccaacatacacaggcccctgg 110
Query: 1863 atgccatctagacctttcatgttgatatcaaagaagactatgttccgattagcatatcga 1922
||||| || ||||| |||| ||||||||||||||| || || || ||||| |||||||||
Sbjct: 109 atgccgtccagacccttcaagttgatatcaaagaaaacaatattgcgattggcatatcga 50
Query: 1923 tcgtgcaagtcaatgccatcaaatctttgtggaaattgtac 1963
||||||||||||||||||||||| | |||||| || |||||
Sbjct: 49 tcgtgcaagtcaatgccatcaaaacgttgtgggaactgtac 9
Score = 117 bits (59), Expect = 3e-024
Identities = 200/247 (80%)
Strand = Plus / Minus
Query: 1404 tctgtaactgaaccatagatccagccaatctcttttccccattcagttttgtcctcgtac 1463
|||||||| |||||||||||||| ||||||||||| ||||||||||| ||||| || ||
Sbjct: 575 tctgtaacagaaccatagatccatccaatctctttgccccattcagtcttgtcttcatat 516
Query: 1464 ccacagctgataacatggatagcttccttcagtagagaagctgggtttgttgaaggtggt 1523
|||||||| ||||||||||||||||| |||| |||| || || || |||| |||||
Sbjct: 515 ccacagctaataacatggatagcttctttcaaaagagttgcaggattggttgttggtgga 456
Query: 1524 atgccaccttgagtcataaaggtggatgcaatgaagattggagactgaccaaagcgtttc 1583
||||| || || | ||||| | |||||| || | ||| ||||||||||| || ||
Sbjct: 455 atgcctccctgttcctggaaggtagctgcaataaaaactggtgactgaccaaaacgcttt 396
Query: 1584 tccaatttcctctgggacataagcactgacctttcatcctcataaccttcaataccctcc 1643
|| || || |||| |||||||||| |||||| ||||| ||||| ||||||| |||||||
Sbjct: 395 tctaaactcttctgcgacataagcagtgacctctcatcatcatatccttcaacaccctcc 336
Query: 1644 tcgatgt 1650
|| ||||
Sbjct: 335 tcaatgt 329
>gb|DT473511.1|DT473511 WS01229.BR_N17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_N17 5', mRNA sequence
Length = 912
Score = 143 bits (72), Expect = 6e-032
Identities = 327/412 (79%)
Strand = Plus / Minus
Query: 2427 ttttgagcaaagtaaaattctggagctcttggttcaatattgtgcttcttacaaaaggga 2486
|||||||| ||||| |||||||||||| || ||||||| | ||||| || || |||
Sbjct: 876 ttttgagcgaagtaccattctggagctcgcggctcaatatcatatttcttgcagaaagga 817
Query: 2487 acccactttctagcaaattcggcagtttcagagagagactcaaaagtcagcatagctgag 2546
||||| |||||||||||||| | |||||||| | | ||||| |||| |||||| |
Sbjct: 816 acccattttctagcaaattcagacgtttcagatatggcttcaaatgtcaacatagcagct 757
Query: 2547 ccatcatcagaaacatagcatgacactttgtcaacagggtaatccacagcaagaatggac 2606
|||||||| ||||||||||| || |||||||| || |||||||| || |||||||| ||
Sbjct: 756 ccatcatctgaaacatagcaagagactttgtcgactgggtaatctactgcaagaatagat 697
Query: 2607 aaaacagtgttggctgtgatcagtggaggttccttcaatggatccactgtactgacaaag 2666
| ||||| |||||||||| ||||||||||||||| || || || ||||||||||||||
Sbjct: 696 agcacagtattggctgtgaccagtggaggttcctttaaagggtcgactgtactgacaaaa 637
Query: 2667 acatcaatgggagccagctgtgatggctctccctctctatcatacctcaatgcaagcctg 2726
| |||| | ||||| || || |||||||| ||| | ||||| || | | ||||||
Sbjct: 636 atgtcaacagcagccaattgagacggctctccttctttctcatatctgagagatagcctg 577
Query: 2727 tcgagatatgtctcacggttgattggataccattttgggaactgatctagaagccaggac 2786
|| |||||||||||||| || | |||| |||||| ||||| ||||| | | ||| ||
Sbjct: 576 tcaagatatgtctcacgattcactggaagccatttagggaattgatccaatatccatgat 517
Query: 2787 aaggcaaaccagacctcacagataacagatactagccacaatccataagcat 2838
| |||||||| | ||||||||||||||||| || |||||| |||||||||
Sbjct: 516 attgcaaaccatatctcacagataacagatattaaccacaaagcataagcat 465
>gb|CA931952.1|CA931952 MTU4TA.P25.A10 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 629
Score = 139 bits (70), Expect = 9e-031
Identities = 165/197 (83%)
Strand = Plus / Plus
Query: 2073 ccatttgtcagcacagcagatacacgaatcagtgcattcattgcaccagccttcttgtga 2132
||||| || |||||||| |||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 407 ccattagttagcacagctgatacacgaacaagtgcattcatggcaccagctttcttgtgg 466
Query: 2133 tgctgaaagcctggtctcttttcacgagagacatagacaagacgtggtaattcatttcca 2192
||||| |||||||| | |||||||||||| ||||| || | ||||| | ||||| |||
Sbjct: 467 tgctggaagcctggacgcttttcacgagaaacataaactaaccgtggcagctcattacca 526
Query: 2193 tcagtgtcaagcccaccactgtgccccaagaacacctgaatcatgccaggatggtcccta 2252
||||| |||||||| ||||| ||||| ||||| ||||||||||| || |||||||| ||
Sbjct: 527 tcagtatcaagccctccactttgccctaagaaaacctgaatcattcctggatggtctctg 586
Query: 2253 gggttattcccaggcca 2269
| |||||| |||||||
Sbjct: 587 gtgttatttncaggcca 603
Score = 71.9 bits (36), Expect = 2e-010
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 1887 atatcaaagaagactatgttccgattagcatatcgatcgtgcaagtcaatgccatcaaat 1946
||||||||||| || | || ||||| ||||||||||| | | ||||||||||||||||
Sbjct: 221 atatcaaagaacacagtattgcgattggcatatcgatcattcttgtcaatgccatcaaat 280
Query: 1947 ctttgtggaaattgtacata 1966
|||||||||||||| |||||
Sbjct: 281 ctttgtggaaattgaacata 300
>gb|DT500468.1|DT500468 PX0015.BR_I21 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0015_I21
5', mRNA sequence
Length = 687
Score = 137 bits (69), Expect = 4e-030
Identities = 357/453 (78%)
Strand = Plus / Minus
Query: 563 cacccacagtaaggagaagatagatgcaaggaggatggaccaaacgatgacgattgttgg 622
|||||| || |||||||| || || |||||||| || ||||| |||||||| ||||||||
Sbjct: 460 cacccatagcaaggagaaaatggaggcaaggagaatagaccagacgatgacaattgttgg 401
Query: 623 cgtgcggttctgcctgcccatgagacccttgaggaaggggtagagatgaaggatcaccca 682
||| || || |||| |||| | |||||||||||| || || | ||| || |||||
Sbjct: 400 cgtacgattttgccgacccaacaaacccttgaggaaaggatacaaatgggcaatgaccca 341
Query: 683 gatcgagaagaacagctttccaaagagcggaccccaggattggtagccgctgttaatggc 742
|| | ||||| ||||| |||||||| |||||||| || ||||| || ||||| |||||
Sbjct: 340 aatagcaaagaagagcttgccaaagagaggaccccatgactggtatccactgtttatggc 281
Query: 743 atacgaaattcctgccaccattccgaccaggttaatgacaagaacagtggtcggagggat 802
||| || | || ||||| || || |||| ||| | | || || ||||| ||||||||
Sbjct: 280 ataggacacaccagccacaatacccaccatgtttagtaaaatgactgtggttggagggat 221
Query: 803 gagcaaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgc 862
||| | | ||||| ||||||||||| ||||| ||||| || ||||| |||||||||||
Sbjct: 220 gagaagagatgtccatttgaacacataaagctctgcaaaatccccatcttcatcagatgc 161
Query: 863 ctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccctggaa 922
|||||| || || ||||||||||||||||| || || | ||| |||| || || || ||
Sbjct: 160 ctttgaagtgacagtgaagttggtatcaatacctgcaagcaccttcaaaagtccttgaaa 101
Query: 923 caccgcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctccacca 982
|| || |||||||| || || || ||||| || ||||| || || ||||| ||||||||
Sbjct: 100 gacggcaaagagatgagctgatgtaccaccgatgacccagaattgttcattcctccacca 41
Query: 983 atcttcaatgccaacaccactccatctgagctc 1015
|||||||| ||||| ||||||||||| |||||
Sbjct: 40 gtcttcaataccaactccactccatctaagctc 8
>gb|CA932078.1|CA932078 MTU4TA.P26.F03 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 596
Score = 131 bits (66), Expect = 2e-028
Identities = 163/194 (84%), Gaps = 1/194 (0%)
Strand = Plus / Plus
Query: 2073 ccatttgtcagcacagcagatacacgaatcagtgcattcattgcaccagccttcttgtga 2132
||||| || |||||||| |||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 404 ccattagttagcacagctgatacacgaacaagtgcattcatggcaccagctttcttgtgg 463
Query: 2133 tgctgaaagcctggtctcttttcacgagagacatagacaagacgtggtaattcatttcca 2192
||||| |||||||| | |||||||||||| ||||| || | ||||| | ||||| |||
Sbjct: 464 tgctggaagcctggacgcttttcacgagaaacataaactaaccgtggcagctcattacca 523
Query: 2193 tcagtgtcaagcccaccactgtgccccaagaacacctgaatcatgccaggatggtcccta 2252
||||| |||||||| ||||| ||||| ||||| ||||||||||| || |||||||| ||
Sbjct: 524 tcagtatcaagccctccactttgccctaagaa-acctgaatcattcctggatggtctctg 582
Query: 2253 gggttattcccagg 2266
| |||||| |||||
Sbjct: 583 gtgttatttccagg 596
Score = 75.8 bits (38), Expect = 1e-011
Identities = 110/134 (82%)
Strand = Plus / Plus
Query: 1833 catcctgttcccacatagactggaccctgaatgccatctagacctttcatgttgatatca 1892
||||| || ||||||||||| || || ||||| ||||| | ||| || ||| ||||||
Sbjct: 164 catccagtgcccacatagacaggtccttgaataccatccaaaccccccaagtttatatca 223
Query: 1893 aagaagactatgttccgattagcatatcgatcgtgcaagtcaatgccatcaaatctttgt 1952
||||| || | || ||||| ||||||||||| | | ||||||||||||||||||||||
Sbjct: 224 aagaacacagtattgcgattggcatatcgatcattcttgtcaatgccatcaaatctttgt 283
Query: 1953 ggaaattgtacata 1966
|||||||| |||||
Sbjct: 284 ggaaattgaacata 297
>gb|CF235713.1|CF235713 PtaJXT0026B7B0703 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 639
Score = 129 bits (65), Expect = 9e-028
Identities = 137/161 (85%)
Strand = Plus / Minus
Query: 1800 tcatatccatacaaagcctgcctattgaaacagcatcctgttcccacatagactggaccc 1859
||||| ||||||||||| ||||| |||||| ||||||||| |||||||| |||||||||
Sbjct: 588 tcatagccatacaaagcttgccttttgaaaacgcatcctgtgcccacatacactggaccc 529
Query: 1860 tgaatgccatctagacctttcatgttgatatcaaagaagactatgttccgattagcatat 1919
||||| ||||||||||| |||||||| ||||||||||| || |||| | || || |||
Sbjct: 528 tgaattccatctagacccttcatgttaatatcaaagaaaacagtgtttctgttggcgtat 469
Query: 1920 cgatcgtgcaagtcaatgccatcaaatctttgtggaaattg 1960
||||| || |||||||||||||||||||| ||||||||
Sbjct: 468 cgatcatgtgtatcaatgccatcaaatctttgaggaaattg 428
>gb|DT500162.1|DT500162 PX0011.BR_G15 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0011_G15
5', mRNA sequence
Length = 701
Score = 129 bits (65), Expect = 9e-028
Identities = 137/161 (85%)
Strand = Plus / Minus
Query: 1800 tcatatccatacaaagcctgcctattgaaacagcatcctgttcccacatagactggaccc 1859
||||| ||||||||||| ||||| |||||| ||||||||| |||||||| |||||||||
Sbjct: 355 tcatagccatacaaagcttgccttttgaaaacgcatcctgtgcccacatacactggaccc 296
Query: 1860 tgaatgccatctagacctttcatgttgatatcaaagaagactatgttccgattagcatat 1919
||||| ||||||||||| |||||||| ||||||||||| || |||| | || || |||
Sbjct: 295 tgaattccatctagacccttcatgttaatatcaaagaaaacagtgtttctgttggcgtat 236
Query: 1920 cgatcgtgcaagtcaatgccatcaaatctttgtggaaattg 1960
||||| || |||||||||||||||||||| ||||||||
Sbjct: 235 cgatcatgtgtatcaatgccatcaaatctttgaggaaattg 195
Score = 67.9 bits (34), Expect = 3e-009
Identities = 82/98 (83%)
Strand = Plus / Minus
Query: 1392 gtcagaatatcctctgtaactgaaccatagatccagccaatctcttttccccattcagtt 1451
||||||||||||||||| | ||||| || |||||||| | ||| |||||||||||||
Sbjct: 700 gtcagaatatcctctgtgatcgaaccgtaaatccagcccagctcgagtccccattcagtt 641
Query: 1452 ttgtcctcgtacccacagctgataacatggatagcttc 1489
||||| || || ||||| ||||| |||||||| |||||
Sbjct: 640 ttgtcttcatatccacaactgatcacatggatggcttc 603
>gb|CK320732.1|CK320732 X9SP01b11 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 769
Score = 121 bits (61), Expect = 2e-025
Identities = 365/465 (78%), Gaps = 1/465 (0%)
Strand = Plus / Minus
Query: 564 acccacagtaaggagaagatagatgcaaggaggatggaccaaacgatgacgattgttggc 623
||||||||||||||||||||||| |||||||| | ||||| || | || || || ||
Sbjct: 697 acccacagtaaggagaagatagaagcaaggagaactgaccacaccacaacaatcgtaggt 638
Query: 624 gtgcggttctgcctgcccatgagacccttgaggaaggggtagagatgaaggatcacccag 683
|| ||||| || | ||||| |||||||||||||| || || ||||||| |||||||||
Sbjct: 637 gttcggttttggcgtcccatcagacccttgaggaaaggataaagatgaataatcacccag 578
Query: 684 atcgagaagaacagctttccaaagagcggaccccaggattggtagccgctgttaatggca 743
| | ||||| ||||| |||||||| |||||||| ||||| || || ||||| |||||
Sbjct: 577 aaagcaaagaaaagcttgccaaagagaggaccccaagattgataaccactgtttatggcg 518
Query: 744 tacgaaattcctgccaccattccgaccaggttaatgacaagaacagtggtcggagggatg 803
|| || | |||||| |||| ||| ||||| || || | || | ||| || || |||||
Sbjct: 517 taagagactcctgcaaccactccaaccagattgattatgaggagagtagttggtgggata 458
Query: 804 agcaaactggtccacttgaacacatatagctcagcaaagtcgccat-cctcatcagatgc 862
|| ||| ||||||| ||||||| ||||||||| | ||| || |||| | |||||||||||
Sbjct: 457 agtaaagtggtccatttgaacatatatagctcggtaaaatcaccatacttcatcagatgc 398
Query: 863 ctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccctggaa 922
||||| || ||||| || || || || ||||| | ||||||||||| || |||||
Sbjct: 397 ttttgaagtgactgtaaaatttaaatatattccagcaaggactttcagcaggccttggaa 338
Query: 923 caccgcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctccacca 982
|| || |||||||| || || || ||||||||||| ||||| ||||| ||||||||
Sbjct: 337 gacagcaaagagatgagctgacacacctccaataacccagaactgttcattcctccacca 278
Query: 983 atcttcaatgccaacaccactccatctgagctccaatataccagt 1027
|| || || ||||||||||||||||| | ||||| ||||||||
Sbjct: 277 ttcatcgatcccaacaccactccatctcatttccaaaataccagt 233
>gb|AY095297.1| Populus tremuloides cellulose synthase (CesA2) mRNA, complete cds
Length = 3277
Score = 121 bits (61), Expect = 2e-025
Identities = 136/161 (84%)
Strand = Plus / Minus
Query: 1800 tcatatccatacaaagcctgcctattgaaacagcatcctgttcccacatagactggaccc 1859
||||| ||||||||||| ||||| |||||| ||||||||| |||||||| |||||||||
Sbjct: 1879 tcatagccatacaaagcttgccttttgaaaacgcatcctgtgcccacatacactggaccc 1820
Query: 1860 tgaatgccatctagacctttcatgttgatatcaaagaagactatgttccgattagcatat 1919
||||| ||||||||||| |||||||| ||||| ||||| || |||| | || || |||
Sbjct: 1819 tgaattccatctagacccttcatgttaatatcgaagaaaacagtgtttctgttggcgtat 1760
Query: 1920 cgatcgtgcaagtcaatgccatcaaatctttgtggaaattg 1960
||||| || |||||||||||||||||||| ||||||||
Sbjct: 1759 cgatcatgtgtatcaatgccatcaaatctttgaggaaattg 1719
Score = 81.8 bits (41), Expect = 2e-013
Identities = 182/229 (79%)
Strand = Plus / Minus
Query: 2290 tccacccctcttcaggcactttctgtgctttggcaacaagggcattgattcttattttga 2349
||||||||||| ||| || ||||||||||| || |||| ||||| || | | ||||
Sbjct: 1389 tccacccctctgtaggaaccttctgtgcttttgctacaatcgcatttatccgaaccttga 1330
Query: 2350 attcttcatactctctcttcattgctcgtctttccttaacaaatgaaggttgaattttgt 2409
|||||||||| ||||||||||| ||||| | |||||||||||| | || |||| |||||
Sbjct: 1329 attcttcatattctctcttcatagctcgacgttccttaacaaaggttggctgaactttgt 1270
Query: 2410 ccttcaggtaatctattttttgagcaaagtaaaattctggagctcttggttcaatattgt 2469
|||| |||||||| | ||| ||| |||||||| || || |||| |||||| || ||
Sbjct: 1269 ccttgaggtaatcaacctttagagtgaagtaaaactcaggggctcgtggttctatgttaa 1210
Query: 2470 gcttcttacaaaagggaacccactttctagcaaattcggcagtttcaga 2518
||||| || || || ||||| |||| ||||||||| |||||||||||
Sbjct: 1209 atttcttgcagaatggcacccattttcgagcaaattcagcagtttcaga 1161
Score = 73.8 bits (37), Expect = 4e-011
Identities = 97/117 (82%)
Strand = Plus / Minus
Query: 1376 atgcattttaaacccagtcagaatatcctctgtaactgaaccatagatccagccaatctc 1435
|||||| ||||| || |||||||||||||| || | ||||| || |||||||| | |||
Sbjct: 2240 atgcatcttaaaacctgtcagaatatcctccgtgatcgaaccgtaaatccagcccagctc 2181
Query: 1436 ttttccccattcagttttgtcctcgtacccacagctgataacatggatagcttcctt 1492
|||||||||||||||||| || || ||||| ||||| |||||||| ||||||||
Sbjct: 2180 gagtccccattcagttttgtcttcatatccacaactgatcacatggatggcttcctt 2124
Score = 56.0 bits (28), Expect = 1e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 948 ccaccaataacccaaaactgctcatttctccaccaatcttcaatgccaacaccactccat 1007
||||| |||||||| || ||||| ||||||||||| || ||||||| || || ||||||
Sbjct: 2671 ccacctataacccagaattgctcgtttctccaccattcctcaatgcttactccgctccat 2612
Query: 1008 ctgagctc 1015
||||||||
Sbjct: 2611 ctgagctc 2604
Score = 52.0 bits (26), Expect = 2e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 2634 ggttccttcaatggatccactgtactgacaaagacatc 2671
||||| |||| ||||||||| |||||||||||||||||
Sbjct: 1045 ggttctttcattggatccacggtactgacaaagacatc 1008
Score = 50.1 bits (25), Expect = 7e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 3671 ctcgttgcggttgtgagagcctgccacca 3699
|||||||||||||||||||||||| ||||
Sbjct: 68 ctcgttgcggttgtgagagcctgcgacca 40
Score = 48.1 bits (24), Expect = 0.003
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 633 tgcctgcccatgagacccttgaggaaggggtagagatgaaggatcacccaga 684
||||| ||||| ||||| |||||||| ||||||||||| | ||||||||||
Sbjct: 2983 tgcctccccattagacctttgaggaatgggtagagatggacaatcacccaga 2932
Score = 46.1 bits (23), Expect = 0.010
Identities = 62/75 (82%)
Strand = Plus / Minus
Query: 1253 aatttccactgacccaagagcccaacggagcacctgattaagacgatcagaaagattgat 1312
|||||| || || ||||||||||| |||||||| || || || ||||| || ||||||||
Sbjct: 2363 aatttcaacagatccaagagcccagcggagcacttggtttagccgatctgatagattgat 2304
Query: 1313 aggtgcagaaccctt 1327
|| || ||||||||
Sbjct: 2303 gggagctgaaccctt 2289
Score = 42.1 bits (21), Expect = 0.16
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 3446 cttgtatctagtcttgcactg 3466
|||||||||||||||||||||
Sbjct: 281 cttgtatctagtcttgcactg 261
>gb|BP924070.1|BP924070 BP924070 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-027_K15.f 5', mRNA sequence
Length = 535
Score = 115 bits (58), Expect = 1e-023
Identities = 214/266 (80%)
Strand = Plus / Minus
Query: 1221 ccataccatataggacaatgtctgctaagcagaatttccactgacccaagagcccaacgg 1280
|||||||| || |||||||| | || || |||||||| || || || |||||||| ||
Sbjct: 535 ccataccaaattggacaatgccgactgagaagaatttcaacagaacctagagcccatcga 476
Query: 1281 agcacctgattaagacgatcagaaagattgataggtgcagaacccttgaaacaaggtcgt 1340
||||| || || ||||||||||||||||| ||||| ||||| || || || || |||
Sbjct: 475 agcacttggttcagacgatcagaaagattaataggagcagaccctttaaaggctgggcgt 416
Query: 1341 ggtggcatgcagtagattgattgccagcctcttgcatgcattttaaacccagtcagaata 1400
||||||||||| ||||| |||| || | |||||||| || || ||||| ||||||
Sbjct: 415 ttgggcatgcagtaaattgaccgccaaccacgggcatgcatcttgaatccagtaagaata 356
Query: 1401 tcctctgtaactgaaccatagatccagccaatctcttttccccattcagttttgtcctcg 1460
|| |||||||| |||||||||||||| || ||||| |||||| || ||||||||||||
Sbjct: 355 tcttctgtaacagaaccatagatccatcctatctcagatccccaatctgttttgtcctcg 296
Query: 1461 tacccacagctgataacatggatagc 1486
|| ||||||||||| ||||| |||||
Sbjct: 295 taaccacagctgatgacatgaatagc 270
>gb|DT476519.1|DT476519 WS01229.B21_N17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_N17 3', mRNA sequence
Length = 853
Score = 115 bits (58), Expect = 1e-023
Identities = 175/214 (81%)
Strand = Plus / Plus
Query: 813 gtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgcctttgaggta 872
||||||||||||| ||||||||| | ||| || ||||| ||||| ||||| ||||| ||
Sbjct: 640 gtccacttgaacatatatagctcggtaaaatcaccatcttcatcggatgcttttgaagtg 699
Query: 873 actgtgaagttggtatcaatcccagccaacactttcagcagaccctggaacaccgcgaag 932
|| || || |||||||| || ||||| | ||||||||||| || ||||| || || ||
Sbjct: 700 acagtaaaattggtatctattccagcaaggactttcagcaggccttggaagacagcaaat 759
Query: 933 agatgggcagaggtgccaccaataacccaaaactgctcatttctccaccaatcttcaatg 992
||||| || || || ||||||||||| |||||||||||||||||||| || |||||
Sbjct: 760 agatgagctgacacacctccaataacccagaactgctcatttctccaccattcgtcaatc 819
Query: 993 ccaacaccactccatctgagctccaatataccag 1026
||||||||||||||||| | ||||| |||||||
Sbjct: 820 ccaacaccactccatctcatttccaaaataccag 853
Score = 71.9 bits (36), Expect = 2e-010
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 639 cccatgagacccttgaggaaggggtagagatgaaggatcacccagatcgagaagaacagc 698
||||| |||||||||||||| ||||| ||||||| |||||||||| | ||||| |||
Sbjct: 465 cccatcagacccttgaggaaagggtaaagatgaataatcacccagaaagcaaagaaaagc 524
Query: 699 tttccaaagagcggaccccaggattggtagccgctgttaatggc 742
|| |||||||| |||||||| ||||| || || ||||| |||||
Sbjct: 525 ttgccaaagaggggaccccaagattgataaccactgtttatggc 568
>gb|AY162180.1| Populus tremuloides cellulose synthase (CesA7) mRNA, complete cds
Length = 3809
Score = 109 bits (55), Expect = 8e-022
Identities = 361/463 (77%)
Strand = Plus / Minus
Query: 1932 tcaatgccatcaaatctttgtggaaattgtacataacaagttttccttcctagagctgga 1991
|||||||||||||||| ||| ||||| || ||||||||| ||| | ||| | ||||
Sbjct: 2014 tcaatgccatcaaatcgttgaggaaactgcacataacaaacttttttccctgatgttgga 1955
Query: 1992 tccatcatgaagcacattgcttctctaagagctttgctgctattgaagtaatggtcacaa 2051
||||||||||| ||||| ||||||||||| ||| |||| | || | ||||||||||||
Sbjct: 1954 tccatcatgaaacacatggcttctctaagtgctctgctattgttaatataatggtcacaa 1895
Query: 2052 tccacattgagaagataggcaccatttgtcagcacagcagatacacgaatcagtgcattc 2111
|| ||||| |||||||| | |||||| ||| || ||||| || || ||||||| ||||
Sbjct: 1894 tcaacattcagaagataaggggcatttgacagaactgcagagacccgcatcagtgaattc 1835
Query: 2112 attgcaccagccttcttgtgatgctgaaagcctggtctcttttcacgagagacatagaca 2171
|| || ||||||||||| || || | || ||||||||||| |||||||| ||||| ||
Sbjct: 1834 atggccccagccttcttatggtgttcgaaccctggtctcttctcacgagaaacataaacc 1775
Query: 2172 agacgtggtaattcatttccatcagtgtcaagcccaccactgtgccccaagaacacctga 2231
||||| ||||| || ||| || |||| | | ||||| || || | ||| ||||||
Sbjct: 1774 agacgaggtaactcgcatccttccacgtcacgtactccactttgaccaaggaaaacctga 1715
Query: 2232 atcatgccaggatggtccctagggttattcccaggccaagcagttccatcagccatggtc 2291
||||||||||||||||| | || || |||||||| | ||||||||| ||| |||
Sbjct: 1714 atcatgccaggatggtctcgtacattgtttccaggccatggagttccatcttgcattgtc 1655
Query: 2292 cacccctcttcaggcactttctgtgctttggcaacaagggcattgattcttattttgaat 2351
|| || ||||| || || || |||||| ||| ||| | |||| || || | |||||||
Sbjct: 1654 caaccatcttccggaaccttttgtgctgtggaaaccaacccatttatcctcactttgaat 1595
Query: 2352 tcttcatactctctcttcattgctcgtctttccttaacaaatg 2394
|||||||| ||||||||||| || || |||||| | |||||||
Sbjct: 1594 tcttcatattctctcttcatggcacgcctttccctgacaaatg 1552
Score = 83.8 bits (42), Expect = 5e-014
Identities = 156/194 (80%)
Strand = Plus / Minus
Query: 2472 ttcttacaaaagggaacccactttctagcaaattcggcagtttcagagagagactcaaaa 2531
||||| ||||| ||||||||||| ||||||||||| | || || ||||||| |||||
Sbjct: 1474 ttcttgcaaaatggaacccacttcctagcaaattcagacgtctcggagagagcttcaaat 1415
Query: 2532 gtcagcatagctgagccatcatcagaaacatagcatgacactttgtcaacagggtaatcc 2591
|| ||||| || | ||||| || || |||||||||| ||||| || ||||| |||||
Sbjct: 1414 gtaagcatggcggcaccatcgtctgacacatagcatgcaactttatccacaggataatca 1355
Query: 2592 acagcaagaatggacaaaacagtgttggctgtgatcagtggaggttccttcaatggatcc 2651
|| || ||||| || | ||||||||| || |||||||| |||||||| |||| |||||
Sbjct: 1354 accgcgagaatagagagaacagtgttcgcagtgatcagcggaggttctttcataggatca 1295
Query: 2652 actgtactgacaaa 2665
|||||||| |||||
Sbjct: 1294 actgtacttacaaa 1281
Score = 79.8 bits (40), Expect = 7e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 1398 atatcctctgtaactgaaccatagatccagccaatctcttttccccattcagttttgtcc 1457
|||||||||||||| || ||||| |||||||||| || ||||||||||| ||||| ||
Sbjct: 2557 atatcctctgtaacagagccatatatccagccaacttcctttccccattctgttttatct 2498
Query: 1458 tcgtacccacagctgataacatggatagcttc 1489
|| || |||||||||||||| ||||| |||||
Sbjct: 2497 tcataaccacagctgataacttggatggcttc 2466
Score = 44.1 bits (22), Expect = 0.040
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1068 gcataattactaatctcaggaa 1089
||||||||||||||||||||||
Sbjct: 2887 gcataattactaatctcaggaa 2866
>gb|DT493063.1|DT493063 WS02553.C21_E11 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02553_E11 3', mRNA sequence
Length = 774
Score = 107 bits (54), Expect = 3e-021
Identities = 261/330 (79%)
Strand = Plus / Plus
Query: 563 cacccacagtaaggagaagatagatgcaaggaggatggaccaaacgatgacgattgttgg 622
|||||| || |||||||| || || |||||||| || ||||| |||||||| ||||||||
Sbjct: 336 cacccatagcaaggagaaaatggaggcaaggagaatagaccagacgatgacaattgttgg 395
Query: 623 cgtgcggttctgcctgcccatgagacccttgaggaaggggtagagatgaaggatcaccca 682
||| || || |||| |||| | |||||||||||| || || | ||| || |||||
Sbjct: 396 cgtacgattttgccgacccaacaaacccttgaggaaaggatacaaatgggcaatgaccca 455
Query: 683 gatcgagaagaacagctttccaaagagcggaccccaggattggtagccgctgttaatggc 742
|| | ||||| ||||| |||||||| |||||||| || ||||| || ||||| |||||
Sbjct: 456 aatagcaaagaagagcttgccaaagagaggaccccatgactggtatccactgtttatggc 515
Query: 743 atacgaaattcctgccaccattccgaccaggttaatgacaagaacagtggtcggagggat 802
||| || | || ||||| || || |||| ||| | | || || ||||| ||||||||
Sbjct: 516 ataggacacaccagccacaatacccaccatgtttagtaaaatgactgtggttggagggat 575
Query: 803 gagcaaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgc 862
||| | | ||||| ||||||||||| ||||| ||||| || ||||| |||||||||||
Sbjct: 576 gagaagagatgtccatttgaacacataaagctctgcaaaatccccatcttcatcagatgc 635
Query: 863 ctttgaggtaactgtgaagttggtatcaat 892
|||||| || || |||||||||||||||||
Sbjct: 636 ctttgaagtgacagtgaagttggtatcaat 665
>gb|DT509821.1|DT509821 WS02424.BR_N10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02424_N10 5', mRNA sequence
Length = 723
Score = 107 bits (54), Expect = 3e-021
Identities = 186/230 (80%)
Strand = Plus / Minus
Query: 798 gggatgagcaaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatca 857
||||| || ||| ||||||| ||||||| ||||||||| | ||| || ||||| ||||||
Sbjct: 629 gggataagtaaagtggtccatttgaacatatatagctcggtaaaatcaccatcttcatca 570
Query: 858 gatgcctttgaggtaactgtgaagttggtatcaatcccagccaacactttcagcagaccc 917
||||| ||||| || ||||| || || ||||| || ||||| | ||||||||||| ||
Sbjct: 569 gatgcttttgaagtgactgtaaaatttgtatctattccagcaaggactttcagcaggcct 510
Query: 918 tggaacaccgcgaagagatgggcagaggtgccaccaataacccaaaactgctcatttctc 977
||||| || || |||||||| || || || ||||||||||| ||||| ||||| |||
Sbjct: 509 tggaagacagcaaagagatgagctgacacacctccaataacccagaactgttcattcctc 450
Query: 978 caccaatcttcaatgccaacaccactccatctgagctccaatataccagt 1027
||||| || || || ||||||||||||||||| | ||||| ||||||||
Sbjct: 449 caccattcatcgatcccaacaccactccatctcatttccaaaataccagt 400
Score = 48.1 bits (24), Expect = 0.003
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 1272 gcccaacggagcacctgattaagacgatcagaaagattgataggtgcagaaccctt 1327
||||| || ||||| ||||| ||||||||||||||||| || || ||||| |||||
Sbjct: 155 gcccaccgaagcacttgatttagacgatcagaaagattaatgggagcagatccctt 100
>gb|DN495393.1|DN495393 N041C05.5pR Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA clone N041C05 5', mRNA sequence
Length = 544
Score = 105 bits (53), Expect = 1e-020
Identities = 242/305 (79%)
Strand = Plus / Minus
Query: 564 acccacagtaaggagaagatagatgcaaggaggatggaccaaacgatgacgattgttggc 623
||||||||||||||||||||||| |||||||| | ||||| || | || || || ||
Sbjct: 307 acccacagtaaggagaagatagaagcaaggagaactgaccacaccacaacaatcgtaggt 248
Query: 624 gtgcggttctgcctgcccatgagacccttgaggaaggggtagagatgaaggatcacccag 683
|| ||||| || | ||||| |||||||||||||| || || ||||||| |||||||||
Sbjct: 247 gttcggttttggcgtcccatcagacccttgaggaaaggataaagatgaataatcacccag 188
Query: 684 atcgagaagaacagctttccaaagagcggaccccaggattggtagccgctgttaatggca 743
| | ||||| ||||| |||||||| |||||||| ||||| || || ||||| |||||
Sbjct: 187 aaagcaaagaaaagcttgccaaagagaggaccccaagattgataaccactgtttatggcg 128
Query: 744 tacgaaattcctgccaccattccgaccaggttaatgacaagaacagtggtcggagggatg 803
|| || | |||||| |||| ||| ||||| || || | || | ||| || || |||||
Sbjct: 127 taagagactcctgcaaccactccaaccagattgattatgaggagagtagttggtgggata 68
Query: 804 agcaaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgcc 863
|| ||| ||||||| ||||||| ||||||||| | ||| || ||||| |||||||||||
Sbjct: 67 agtaaagtggtccatttgaacatatatagctcggtaaaatcaccatcttcatcagatgct 8
Query: 864 tttga 868
|||||
Sbjct: 7 tttga 3
>gb|CN549808.1|CN549808 GQ0241.B3_H11 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0241_H11 5', mRNA sequence
Length = 840
Score = 103 bits (52), Expect = 5e-020
Identities = 100/116 (86%)
Strand = Plus / Minus
Query: 1374 gcatgcattttaaacccagtcagaatatcctctgtaactgaaccatagatccagccaatc 1433
|||||||| ||||| ||||| |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 554 gcatgcatcttaaaaccagtaagaatatcttctgtaacagaaccatagatccatccaatc 495
Query: 1434 tcttttccccattcagttttgtcctcgtacccacagctgataacatggatagcttc 1489
|| |||||| || ||||||||||| |||||||| || || ||||| ||||||||
Sbjct: 494 tcagatccccaatctgttttgtcctcatacccacaactaatgacatgaatagcttc 439
Score = 63.9 bits (32), Expect = 4e-008
Identities = 86/104 (82%)
Strand = Plus / Minus
Query: 1218 tagccataccatataggacaatgtctgctaagcagaatttccactgacccaagagcccaa 1277
||||||||||| || |||||||| | || || |||||||| || || || ||||||||
Sbjct: 710 tagccataccaaattggacaatgccgactgagaagaatttcaacagaacccagagcccat 651
Query: 1278 cggagcacctgattaagacgatcagaaagattgataggtgcaga 1321
|| ||||| || || ||||||||||||||||| ||||| |||||
Sbjct: 650 cgaagcacttggttcagacgatcagaaagattaataggagcaga 607
Score = 42.1 bits (21), Expect = 0.16
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 1833 catcctgttcccacatagactggaccctgaatgccatctagacctttcatgttgatatca 1892
||||| || ||||||||||| || || ||||| ||||| ||||| ||| ||| ||||||
Sbjct: 83 catccagtacccacatagacaggtccttgaataccatccagacccctcaagtttatatca 24
Query: 1893 aagaa 1897
|||||
Sbjct: 23 aagaa 19
>gb|CV244615.1|CV244615 WS0255.B21_C09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0255_C09
3', mRNA sequence
Length = 402
Score = 103 bits (52), Expect = 5e-020
Identities = 160/196 (81%)
Strand = Plus / Minus
Query: 1860 tgaatgccatctagacctttcatgttgatatcaaagaagactatgttccgattagcatat 1919
||||||||||| | |||| |||| |||||||||||||| || ||||||| || ||||||
Sbjct: 202 tgaatgccatccaaacctctcatattgatatcaaagaatacagtgttccggttggcatat 143
Query: 1920 cgatcgtgcaagtcaatgccatcaaatctttgtggaaattgtacataacaagttttcctt 1979
||||| | ||||||||||||||| || ||||| || || ||||| || | || ||
Sbjct: 142 cgatcactcctgtcaatgccatcaaacctctgtgggaactggacatagcacactctcttt 83
Query: 1980 cctagagctggatccatcatgaagcacattgcttctctaagagctttgctgctattgaag 2039
|| || ||||||||||||||| |||||||||||||||||||| || ||| |||||| |
Sbjct: 82 ccaagtaatggatccatcatgaaacacattgcttctctaagagccttactgttattgatg 23
Query: 2040 taatggtcacaatcca 2055
|| || ||||||||||
Sbjct: 22 tagtgatcacaatcca 7
>gb|DT489371.1|DT489371 WS02542.B21_A18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02542_A18 3', mRNA sequence
Length = 402
Score = 103 bits (52), Expect = 5e-020
Identities = 160/196 (81%)
Strand = Plus / Minus
Query: 1860 tgaatgccatctagacctttcatgttgatatcaaagaagactatgttccgattagcatat 1919
||||||||||| | |||| |||| |||||||||||||| || ||||||| || ||||||
Sbjct: 202 tgaatgccatccaaacctctcatattgatatcaaagaatacagtgttccggttggcatat 143
Query: 1920 cgatcgtgcaagtcaatgccatcaaatctttgtggaaattgtacataacaagttttcctt 1979
||||| | ||||||||||||||| || ||||| || || ||||| || | || ||
Sbjct: 142 cgatcactcctgtcaatgccatcaaacctctgtgggaactggacatagcacactctcttt 83
Query: 1980 cctagagctggatccatcatgaagcacattgcttctctaagagctttgctgctattgaag 2039
|| || ||||||||||||||| |||||||||||||||||||| || ||| |||||| |
Sbjct: 82 ccaagtaatggatccatcatgaaacacattgcttctctaagagccttactgttattgatg 23
Query: 2040 taatggtcacaatcca 2055
|| || ||||||||||
Sbjct: 22 tagtgatcacaatcca 7
>gb|BU815407.1|BU815407 N041C05 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 675
Score = 101 bits (51), Expect = 2e-019
Identities = 237/299 (79%)
Strand = Plus / Minus
Query: 564 acccacagtaaggagaagatagatgcaaggaggatggaccaaacgatgacgattgttggc 623
||||||||||||||||||||||| |||||||| | ||||| || | || || || ||
Sbjct: 299 acccacagtaaggagaagatagaagcaaggagaactgaccacaccacaacaatcgtaggt 240
Query: 624 gtgcggttctgcctgcccatgagacccttgaggaaggggtagagatgaaggatcacccag 683
|| ||||| || | ||||| |||||||||||||| || || ||||||| |||||||||
Sbjct: 239 gttcggttttggcgtcccatcagacccttgaggaaaggataaagatgaataatcacccag 180
Query: 684 atcgagaagaacagctttccaaagagcggaccccaggattggtagccgctgttaatggca 743
| | ||||| ||||| |||||||| |||||||| ||||| || || ||||| |||||
Sbjct: 179 aaagcaaagaaaagcttgccaaagagaggaccccaagattgataaccactgtttatggcg 120
Query: 744 tacgaaattcctgccaccattccgaccaggttaatgacaagaacagtggtcggagggatg 803
|| || | |||||| |||| ||| ||||| || || | || | ||| || || |||||
Sbjct: 119 taagagactcctgcaaccactccaaccagattgattatgaggagagtagttggtgggata 60
Query: 804 agcaaactggtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgc 862
|| ||| ||||||| ||||||| ||||||||| | ||| || ||||| |||||||||||
Sbjct: 59 agtaaagtggtccatttgaacatatatagctcggtaaaatcaccatcttcatcagatgc 1
>gb|AY573574.1| Populus tremula x Populus tremuloides cellulose synthase (CesA3-2)
mRNA, complete cds
Length = 3358
Score = 99.6 bits (50), Expect = 8e-019
Identities = 422/546 (77%)
Strand = Plus / Minus
Query: 2114 tgcaccagccttcttgtgatgctgaaagcctggtctcttttcacgagagacatagacaag 2173
|||||||||||| ||||| ||||| |||| |||||||| || | |||||||| || ||
Sbjct: 1446 tgcaccagcctttttgtggtgctggtagccaggtctcttctccctggagacatatactag 1387
Query: 2174 acgtggtaattcatttccatcagtgtcaagcccaccactgtgccccaagaacacctgaat 2233
||| |||| ||||||||| ||| ||||| | | ||| | | || | ||| ||||||||
Sbjct: 1386 acgaggtagttcatttccttcaatgtcacgagctccagtatttccaaggaagacctgaat 1327
Query: 2234 catgccaggatggtccctagggttattcccaggccaagcagttccatcagccatggtcca 2293
||||||||| || || | | ||||||||||||||||| |||||||| ||| |||||
Sbjct: 1326 catgccagggtgatcacgtgtgttattcccaggccaaggtgttccatcttgcatagtcca 1267
Query: 2294 cccctcttcaggcactttctgtgctttggcaacaagggcattgattcttattttgaattc 2353
|| |||||||| |||||| || || || || |||||||| | || | |||| | ||
Sbjct: 1266 tccttcttcaggtgttttctgagcctttgctaccagggcattaactcggactttgtactc 1207
Query: 2354 ttcatactctctcttcattgctcgtctttccttaacaaatgaaggttgaattttgtcctt 2413
|||||| || || |||||||||| | ||| || || || ||||| |||| ||||| ||
Sbjct: 1206 ttcataatcccttttcattgctctacgttctttcacgaaagaaggctgaaccttgtcttt 1147
Query: 2414 caggtaatctattttttgagcaaagtaaaattctggagctcttggttcaatattgtgctt 2473
|| |||||| ||||| || | |||||||| || || |||||||||||||| || ||
Sbjct: 1146 caagtaatcaattttctgtgagaagtaaaactccggtgctcttggttcaattgagtattt 1087
Query: 2474 cttacaaaagggaacccactttctagcaaattcggcagtttcagagagagactcaaaagt 2533
|| || || ||||||||||| || ||||| || || ||||| ||||| ||||| |
Sbjct: 1086 tttgcagaacggaacccacttccttgcaaactcagctgtttctaccagagattcaaatga 1027
Query: 2534 cagcatagctgagccatcatcagaaacatagcatgacactttgtcaacagggtaatccac 2593
|||||||||| ||||||||||| || ||||| || ||||| || || || || |||||
Sbjct: 1026 aagcatagctgcaccatcatcagacacgtagcaggaaactttatcgacgggatagtccac 967
Query: 2594 agcaagaatggacaaaacagtgttggctgtgatcagtggaggttccttcaatggatccac 2653
|||||| ||||| | || || ||||| ||||||| |||||| || |||| |||||| ||
Sbjct: 966 agcaaggatggaaaggactgtattggcagtgatcaatggagggtctttcagtggatcaac 907
Query: 2654 tgtact 2659
|||||
Sbjct: 906 agtact 901
Score = 85.7 bits (43), Expect = 1e-014
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 1398 atatcctctgtaactgaaccatagatccagccaatctcttttccccattcagttttgtcc 1457
|||||||| || ||||| ||||||||||| ||||||||||||||||||||||| || ||
Sbjct: 2159 atatcctcagtgactgacccatagatccaaccaatctcttttccccattcagtcttctct 2100
Query: 1458 tcgtacccacagctgataacatggatagcttcctt 1492
|| || ||||||| ||| ||||| || ||||||||
Sbjct: 2099 tcatagccacagccgatgacatgaattgcttcctt 2065
Score = 48.1 bits (24), Expect = 0.003
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 639 cccatgagacccttgaggaaggggtagagatgaaggatcacccagatcgagaagaacagc 698
||||| ||||| || ||||| || ||||||||||| |||||||||| | ||||||| |
Sbjct: 2918 cccattagacctttaaggaatggatagagatgaagaatcacccagaaagcaaagaacacc 2859
Query: 699 tttccaaagagcggacccca 718
|| |||||||| || |||||
Sbjct: 2858 ttgccaaagagaggccccca 2839
Score = 48.1 bits (24), Expect = 0.003
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 1233 ggacaatgtctgctaagcagaatttccactgacccaagagcccaacggagcacctg 1288
||||| |||||||||| | ||||||||| || ||||||||||| ||||| |||||
Sbjct: 2324 ggacagtgtctgctaaagaaaatttccacagaaccaagagcccatcggaggacctg 2269
Score = 44.1 bits (22), Expect = 0.040
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 1851 actggaccctgaatgccatctagacctttcatgttgatatcaaagaagactatgttccga 1910
||||| || ||||||||||| | ||||||||||| | ||||||||| |||| ||| |||
Sbjct: 1709 actggtccttgaatgccatccaaccctttcatgttaacatcaaagaaaactacgttacga 1650
Query: 1911 tt 1912
||
Sbjct: 1649 tt 1648
Score = 42.1 bits (21), Expect = 0.16
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 876 gtgaagttggtatcaatcccagccaacactttcagcagaccctggaacaccgcgaagaga 935
|||||||| ||||| || |||||||||| ||| | | |||||||| ||||| ||||||
Sbjct: 2684 gtgaagttcgtatcgatgccagccaacatttttaagaatccctggaagaccgcaaagaga 2625
Query: 936 tgggc 940
|||||
Sbjct: 2624 tgggc 2620
>gb|CA927446.1|CA927446 MTU6CR.P9.B04 Aspen root cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 648
Score = 95.6 bits (48), Expect = 1e-017
Identities = 99/116 (85%)
Strand = Plus / Plus
Query: 1374 gcatgcattttaaacccagtcagaatatcctctgtaactgaaccatagatccagccaatc 1433
|||||||| ||||| ||||| |||||||| |||||||| |||||||||||||| ||||||
Sbjct: 470 gcatgcatcttaaaaccagtaagaatatcttctgtaacagaaccatagatccatccaatc 529
Query: 1434 tcttttccccattcagttttgtcctcgtacccacagctgataacatggatagcttc 1489
|| |||||| || ||||||| ||| |||||||| || || ||||| ||||||||
Sbjct: 530 tcagatccccaatctgttttgttctcatacccacaactaatgacatgaatagcttc 585
Score = 65.9 bits (33), Expect = 1e-008
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 948 ccaccaataacccaaaactgctcatttctccaccaatcttcaatgccaacaccactccat 1007
||||| || ||||||||||| ||||| |||||||| || ||||| ||||||||||||||
Sbjct: 44 ccaccgatgacccaaaactgttcattcctccaccactcatcaatcccaacaccactccac 103
Query: 1008 ctgagctccaatatacc 1024
|| | |||||| |||||
Sbjct: 104 ctcatctccaagatacc 120
Score = 63.9 bits (32), Expect = 4e-008
Identities = 86/104 (82%)
Strand = Plus / Plus
Query: 1218 tagccataccatataggacaatgtctgctaagcagaatttccactgacccaagagcccaa 1277
||||||||||| || |||||||| | || || |||||||| || || || ||||||||
Sbjct: 314 tagccataccaaattggacaatgccgactgagaagaatttcaacagaacccagagcccat 373
Query: 1278 cggagcacctgattaagacgatcagaaagattgataggtgcaga 1321
|| ||||| || || ||||||||||||||||| ||||| |||||
Sbjct: 374 cgaagcacttggttcagacgatcagaaagattaataggagcaga 417
>gb|CV242542.1|CV242542 WS02515.B21_F16 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02515_F16 3', mRNA sequence
Length = 861
Score = 95.6 bits (48), Expect = 1e-017
Identities = 105/124 (84%)
Strand = Plus / Plus
Query: 786 acagtggtcggagggatgagcaaactggtccacttgaacacatatagctcagcaaagtcg 845
|||||||| ||||||||||| | | ||||| ||||||||||| ||||| ||||| ||
Sbjct: 729 acagtggttggagggatgagaagagatgtccatttgaacacataaagctctgcaaaatcc 788
Query: 846 ccatcctcatcagatgcctttgaggtaactgtgaagttggtatcaatcccagccaacact 905
||||||||||||||||| ||||| || || ||||||||||||||||| || || | ||||
Sbjct: 789 ccatcctcatcagatgcttttgaagtgacagtgaagttggtatcaatacctgcaagcact 848
Query: 906 ttca 909
||||
Sbjct: 849 ttca 852
Score = 65.9 bits (33), Expect = 1e-008
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 690 aagaacagctttccaaagagcggaccccaggattggtagccgctgttaatggc 742
||||||||||| ||||||||||||||||| || ||||| |||||||| |||||
Sbjct: 633 aagaacagcttgccaaagagcggaccccatgactggtacccgctgtttatggc 685
>gb|CA930801.1|CA930801 MTU2TA.P10.D08 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 530
Score = 93.7 bits (47), Expect = 5e-017
Identities = 83/95 (87%)
Strand = Plus / Plus
Query: 2073 ccatttgtcagcacagcagatacacgaatcagtgcattcattgcaccagccttcttgtga 2132
||||| || |||||||| |||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 407 ccattagttagcacagctgatacacgaacaagtgcattcatggcaccagctttcttgtgg 466
Query: 2133 tgctgaaagcctggtctcttttcacgagagacata 2167
||||| |||||||| | |||||||||||| |||||
Sbjct: 467 tgctggaagcctggacgcttttcacgagaaacata 501
Score = 83.8 bits (42), Expect = 5e-014
Identities = 111/134 (82%)
Strand = Plus / Plus
Query: 1833 catcctgttcccacatagactggaccctgaatgccatctagacctttcatgttgatatca 1892
||||| || ||||||||||| || || ||||| ||||| | ||| ||| ||| ||||||
Sbjct: 167 catccagtgcccacatagacaggtccttgaataccatccaaacccctcaagtttatatca 226
Query: 1893 aagaagactatgttccgattagcatatcgatcgtgcaagtcaatgccatcaaatctttgt 1952
||||| || | || ||||| ||||||||||| | | ||||||||||||||||||||||
Sbjct: 227 aagaacacagtattgcgattggcatatcgatcattcttgtcaatgccatcaaatctttgt 286
Query: 1953 ggaaattgtacata 1966
|||||||| |||||
Sbjct: 287 ggaaattgaacata 300
Score = 42.1 bits (21), Expect = 0.16
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1989 ggatccatcatgaagcacattgcttctct 2017
|||||||||||||| ||||| ||||||||
Sbjct: 323 ggatccatcatgaaacacatagcttctct 351
>gb|CF233490.1|CF233490 PtaJXO0024C12C1206 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 584
Score = 93.7 bits (47), Expect = 5e-017
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 1800 tcatatccatacaaagcctgcctattgaaacagcatcctgttcccacatagactggaccc 1859
||||| ||||||||||| ||||| |||||| ||||||||| |||||||| |||||||||
Sbjct: 85 tcatagccatacaaagcttgccttttgaaaacgcatcctgtgcccacatacactggaccc 26
Query: 1860 tgaatgccatctagacctttcat 1882
||||| ||||||||||| |||||
Sbjct: 25 tgaattccatctagacccttcat 3
Score = 61.9 bits (31), Expect = 2e-007
Identities = 93/114 (81%)
Strand = Plus / Minus
Query: 1376 atgcattttaaacccagtcagaatatcctctgtaactgaaccatagatccagccaatctc 1435
|||||| ||||| || |||||||||||||| || | ||||| || |||||||| | |||
Sbjct: 446 atgcatcttaaaacctgtcagaatatcctccgtgatcgaaccgtaaatccagcccagctc 387
Query: 1436 ttttccccattcagttttgtcctcgtacccacagctgataacatggatagcttc 1489
|||||||||||||| ||| || || ||||| ||||| |||||||| |||||
Sbjct: 386 gagtccccattcagtttngtcttcatatccacaactgatcacatggatggcttc 333
>gb|AJ777820.1|AJ777820 AJ777820 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400035F01F1, mRNA sequence
Length = 658
Score = 91.7 bits (46), Expect = 2e-016
Identities = 157/194 (80%)
Strand = Plus / Minus
Query: 813 gtccacttgaacacatatagctcagcaaagtcgccatcctcatcagatgcctttgaggta 872
||||| ||||||| |||| |||||||| || || ||||| || |||||||| || |||
Sbjct: 498 gtccatttgaacaagtataattcagcaaaatcaccgtcctcgtctgatgccttggacgta 439
Query: 873 actgtgaagttggtatcaatcccagccaacactttcagcagaccctggaacaccgcgaag 932
|| ||||||||||| ||||| ||||| | ||||| |||| || ||||| || || ||
Sbjct: 438 acagtgaagttggtgtcaatgccagcaagtactttgagcaagccttggaaaacagcaaaa 379
Query: 933 agatgggcagaggtgccaccaataacccaaaactgctcatttctccaccaatcttcaatg 992
|||||||| || ||||| |||||||||||||| ||||| |||||||| || |||||
Sbjct: 378 agatgggctgaaacaccaccgataacccaaaactgttcattcctccaccactcatcaatc 319
Query: 993 ccaacaccactcca 1006
||||||||||||||
Sbjct: 318 ccaacaccactcca 305
Score = 56.0 bits (28), Expect = 1e-005
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 1218 tagccataccatataggacaatgtctgctaagcagaatttccactgacccaagagcccaa 1277
||||||||||| || |||||||| | || || |||||||| || || || ||||||||
Sbjct: 93 tagccataccaaattggacaatgccgactgagaagaatttcaacagaacccagagcccat 34
Query: 1278 cggagcacctgattaagacgatcagaaagatt 1309
|| ||||| || || |||||||||||||||||
Sbjct: 33 cgaagcacttggttcagacgatcagaaagatt 2
Score = 42.1 bits (21), Expect = 0.16
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 674 gatcacccagatcgagaagaacagctttccaaagagcggacccca 718
||||||||||| | |||||| ||||| |||||||| ||||||||
Sbjct: 638 gatcacccagaatgcgaagaaaagcttgccaaagagtggacccca 594
>gb|AY573575.1| Populus tremula x Populus tremuloides cellulose synthase (CesA4)
mRNA, complete cds
Length = 3778
Score = 89.7 bits (45), Expect = 8e-016
Identities = 159/197 (80%)
Strand = Plus / Minus
Query: 1932 tcaatgccatcaaatctttgtggaaattgtacataacaagttttccttcctagagctgga 1991
|||||||||||||||| ||| ||||| || ||||||||| ||| | ||| | ||||
Sbjct: 2048 tcaatgccatcaaatcgttgaggaaactgcacataacaaacttttttccctgatgttgga 1989
Query: 1992 tccatcatgaagcacattgcttctctaagagctttgctgctattgaagtaatggtcacaa 2051
||||||||||| ||||| ||||||||||| |||||||| | || | || |||||||||
Sbjct: 1988 tccatcatgaaacacatggcttctctaagtgctttgctattgttaatatattggtcacaa 1929
Query: 2052 tccacattgagaagataggcaccatttgtcagcacagcagatacacgaatcagtgcattc 2111
|| ||||| |||||||| | |||||| ||| || ||||| || || ||||||| ||||
Sbjct: 1928 tcaacattcagaagataaggggcatttgacagaactgcagagacccgcatcagtgaattc 1869
Query: 2112 attgcaccagccttctt 2128
|| || |||||||||||
Sbjct: 1868 atggccccagccttctt 1852
Score = 79.8 bits (40), Expect = 7e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 1398 atatcctctgtaactgaaccatagatccagccaatctcttttccccattcagttttgtcc 1457
|||||||||||||| || ||||| |||||||||| || ||||||||||| ||||| ||
Sbjct: 2591 atatcctctgtaacagagccatatatccagccaacttcctttccccattctgttttatct 2532
Query: 1458 tcgtacccacagctgataacatggatagcttc 1489
|| || |||||||||||||| ||||| |||||
Sbjct: 2531 tcataaccacagctgataacttggatggcttc 2500
Score = 67.9 bits (34), Expect = 3e-009
Identities = 154/194 (79%)
Strand = Plus / Minus
Query: 2472 ttcttacaaaagggaacccactttctagcaaattcggcagtttcagagagagactcaaaa 2531
||||| ||||| ||||||||||| ||||||||||| | || || ||||||| |||||
Sbjct: 1508 ttcttgcaaaatggaacccacttcctagcaaattcagacgtctcggagagagcttcaaat 1449
Query: 2532 gtcagcatagctgagccatcatcagaaacatagcatgacactttgtcaacagggtaatcc 2591
|| ||||| || | ||||| || || |||||||||| ||||| || ||||| |||||
Sbjct: 1448 gtaagcatggcggcaccatcgtctgacacatagcatgcaactttatccacaggataatca 1389
Query: 2592 acagcaagaatggacaaaacagtgttggctgtgatcagtggaggttccttcaatggatcc 2651
|| || ||||| || | |||||||| || |||||||| |||||||| |||| |||||
Sbjct: 1388 accgcgagaatagagagtacagtgttcgcagtgatcagcggaggttctttcataggatca 1329
Query: 2652 actgtactgacaaa 2665
|| ||||| |||||
Sbjct: 1328 accgtacttacaaa 1315
Score = 44.1 bits (22), Expect = 0.040
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1068 gcataattactaatctcaggaa 1089
||||||||||||||||||||||
Sbjct: 2921 gcataattactaatctcaggaa 2900
Score = 44.1 bits (22), Expect = 0.040
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 2345 tttgaattcttcatactctctcttcattgctcgtctttccttaacaaatg 2394
|||||| |||||||| ||||||||||| || || |||||| | |||||||
Sbjct: 1635 tttgaactcttcatattctctcttcatggcacgcctttccctgacaaatg 1586
>gb|CX169886.1|CX169886 G10_69-94_14.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 620
Score = 87.7 bits (44), Expect = 3e-015
Identities = 208/260 (80%), Gaps = 2/260 (0%)
Strand = Plus / Minus
Query: 1989 ggatccatcatgaagcacattgcttctctaagagctttgctgctattgaagtaatggtca 2048
|||||||||||||| ||||| |||||||| | ||| ||||| | || | |||||| |||
Sbjct: 274 ggatccatcatgaaacacatagcttctctcaaagccttgctattgtttatgtaatgatca 215
Query: 2049 caatccacattgag-aagataggcaccatttgtcagcacagcagatacacgaatcagtgc 2107
||||| | ||| | |||| |||| ||||| || || || || |||||||||| ||||
Sbjct: 214 caatcaagattcaacaagaaaggc-ccattagttagaacggctgatacacgaacaagtga 156
Query: 2108 attcattgcaccagccttcttgtgatgctgaaagcctggtctcttttcacgagagacata 2167
|||||| ||||| || |||||||| ||||| ||||| || | |||||||||||| |||||
Sbjct: 155 attcatggcaccggctttcttgtggtgctggaagcccggacgcttttcacgagaaacata 96
Query: 2168 gacaagacgtggtaattcatttccatcagtgtcaagcccaccactgtgccccaagaacac 2227
|| | || || | ||||| ||||||| |||||||| ||||| || |||||||| ||
Sbjct: 95 aactaaccgcggaagctcattaccatcagaatcaagccctccactttggcccaagaaaac 36
Query: 2228 ctgaatcatgccaggatggt 2247
||||||||| || |||||||
Sbjct: 35 ctgaatcattcctggatggt 16
Score = 83.8 bits (42), Expect = 5e-014
Identities = 111/134 (82%)
Strand = Plus / Minus
Query: 1833 catcctgttcccacatagactggaccctgaatgccatctagacctttcatgttgatatca 1892
||||| || ||||||||||| || || ||||| ||||| ||||| ||| ||| ||||||
Sbjct: 430 catccagtacccacatagacaggtccttgaataccatccagacccctcaagtttatatca 371
Query: 1893 aagaagactatgttccgattagcatatcgatcgtgcaagtcaatgccatcaaatctttgt 1952
||||| || | || ||||| ||||||||||| | | ||||||||||||||||||||||
Sbjct: 370 aagaatacagtattgcgattggcatatcgatcattcctgtcaatgccatcaaatctttgt 311
Query: 1953 ggaaattgtacata 1966
||||| || |||||
Sbjct: 310 ggaaactgaacata 297
>gb|AY573572.1| Populus tremula x Populus tremuloides cellulose synthase (CesA2)
mRNA, complete cds
Length = 3991
Score = 87.7 bits (44), Expect = 3e-015
Identities = 188/236 (79%)
Strand = Plus / Minus
Query: 2430 tgagcaaagtaaaattctggagctcttggttcaatattgtgcttcttacaaaagggaacc 2489
|||||||| || |||||||||||| |||||||| || | |||| || || || |||
Sbjct: 1797 tgagcaaaataccattctggagctcgaggttcaatgctgaacctcttgcagaaagggacc 1738
Query: 2490 cactttctagcaaattcggcagtttcagagagagactcaaaagtcagcatagctgagcca 2549
|||||||| |||||||| | || ||||||| || |||||||| ||||| || | |||
Sbjct: 1737 cactttcttgcaaattcagatgtctcagagatagcttcaaaagtaagcatggcagcacca 1678
Query: 2550 tcatcagaaacatagcatgacactttgtcaacagggtaatccacagcaagaatggacaaa 2609
||||| || |||||||||| ||||| || || || ||||| |||||||| ||||||||
Sbjct: 1677 tcatctgagacatagcatgcaactttttcgactggataatctacagcaaggatggacaag 1618
Query: 2610 acagtgttggctgtgatcagtggaggttccttcaatggatccactgtactgacaaa 2665
|| ||||| || ||||| ||||||||||| |||| ||||| ||||| || |||||
Sbjct: 1617 actgtgtttgcagtgataagtggaggttctttcataggatcaactgtgctaacaaa 1562
Score = 73.8 bits (37), Expect = 4e-011
Identities = 82/97 (84%)
Strand = Plus / Minus
Query: 1398 atatcctctgtaactgaaccatagatccagccaatctcttttccccattcagttttgtcc 1457
|||||||| ||||| || ||||| ||||| |||||||||||||||||||||||||| ||
Sbjct: 2841 atatcctcagtaacagagccataaatccacccaatctcttttccccattcagttttatct 2782
Query: 1458 tcgtacccacagctgataacatggatagcttccttca 1494
|| || ||||| || || ||||| || ||||| ||||
Sbjct: 2781 tcataaccacaactaatgacatgaatggcttctttca 2745
Score = 71.9 bits (36), Expect = 2e-010
Identities = 74/84 (88%), Gaps = 2/84 (2%)
Strand = Plus / Minus
Query: 1932 tcaatgccatcaaatctttgtggaaattgtacataacaagttttccttcctaga-gctgg 1990
||||| |||||||||||||| |||||||| ||||||||| ||||| |||| ||| | |||
Sbjct: 2295 tcaatcccatcaaatctttgcggaaattgaacataacaaattttctttcc-agatgttgg 2237
Query: 1991 atccatcatgaagcacattgcttc 2014
||||||||||||||||| |||||
Sbjct: 2236 gtccatcatgaagcacatggcttc 2213
Score = 58.0 bits (29), Expect = 3e-006
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 948 ccaccaataacccaaaactgctcatttctccaccaatcttcaatgccaacacc 1000
|||||||| ||||| |||||||||||||||||||| || | |||||||||||
Sbjct: 3291 ccaccaatgacccagaactgctcatttctccaccagtcatggatgccaacacc 3239
Score = 58.0 bits (29), Expect = 3e-006
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 3498 tactcatagcaagggcggcagacagggaaggcacactcattgcaggcaacaaa 3550
|||||||||||||| | ||| |||||||| ||||| |||||||| ||||||||
Sbjct: 666 tactcatagcaaggtctgcacacagggaacgcacattcattgcaagcaacaaa 614
Score = 48.1 bits (24), Expect = 0.003
Identities = 204/264 (77%)
Strand = Plus / Minus
Query: 2108 attcattgcaccagccttcttgtgatgctgaaagcctggtctcttttcacgagagacata 2167
|||||| || ||||| |||||||| || | ||| || |||||||| |||||||| || ||
Sbjct: 2119 attcatagccccagctttcttgtggtgatcaaatcccggtctcttctcacgagacacgta 2060
Query: 2168 gacaagacgtggtaattcatttccatcagtgtcaagcccaccactgtgccccaagaacac 2227
|| ||||| || ||||||||||| ||| ||| | | ||| | || || | ||| ||
Sbjct: 2059 aactagacgaggcaattcatttccctcaacatcatgaactccattatgaccaaggaagac 2000
Query: 2228 ctgaatcatgccaggatggtccctagggttattcccaggccaagcagttccatcagccat 2287
||||||||| |||||||| || || |||||||| ||||| | ||| ||||| |||
Sbjct: 1999 ctgaatcattccaggatgatctctgacattattccctggccatggagtgccatcctgcat 1940
Query: 2288 ggtccacccctcttcaggcactttctgtgctttggcaacaagggcattgattcttatttt 2347
||||| || || ||||| || |||||||| ||||||| | |||| |||| | |||
Sbjct: 1939 tgtccaaccatcctcaggaaccttctgtgccgtggcaactaacccatttattcgaacttt 1880
Query: 2348 gaattcttcatactctctcttcat 2371
||| ||||||||||||||||||||
Sbjct: 1879 gaactcttcatactctctcttcat 1856
>gb|BU895617.1|BU895617 X028D07 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 571
Score = 85.7 bits (43), Expect = 1e-014
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 1398 atatcctctgtaactgaaccatagatccagccaatctcttttccccattcagttttgtcc 1457
|||||||| || ||||| ||||||||||| ||||||||||||||||||||||| || ||
Sbjct: 275 atatcctcagtgactgacccatagatccaaccaatctcttttccccattcagtcttctct 216
Query: 1458 tcgtacccacagctgataacatggatagcttcctt 1492
|| || ||||||| ||| ||||| || ||||||||
Sbjct: 215 tcatagccacagccgatgacatgaattgcttcctt 181
Score = 48.1 bits (24), Expect = 0.003
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 1233 ggacaatgtctgctaagcagaatttccactgacccaagagcccaacggagcacctg 1288
||||| |||||||||| | ||||||||| || ||||||||||| ||||| |||||
Sbjct: 440 ggacagtgtctgctaaagaaaatttccacagaaccaagagcccatcggaggacctg 385
>gb|CN519879.1|CN519879 GQ0108.B3_I06 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_I06 5', mRNA sequence
Length = 780
Score = 85.7 bits (43), Expect = 1e-014
Identities = 217/275 (78%)
Strand = Plus / Minus
Query: 639 cccatgagacccttgaggaaggggtagagatgaaggatcacccagatcgagaagaacagc 698
||||| |||||||||||||| ||||| ||||||| |||||||||| | ||||| |||
Sbjct: 354 cccatcagacccttgaggaaagggtaaagatgaataatcacccagaaagcaaagaaaagc 295
Query: 699 tttccaaagagcggaccccaggattggtagccgctgttaatggcatacgaaattcctgcc 758
|| |||||||| |||||||| ||||| || || ||||| ||||| || || | ||| ||
Sbjct: 294 ttgccaaagaggggaccccaagattgataaccactgtttatggcgtaggagactccagca 235
Query: 759 accattccgaccaggttaatgacaagaacagtggtcggagggatgagcaaactggtccac 818
|||| ||| || || || || | || | ||| || || ||||| || ||| | ||||||
Sbjct: 234 accactccaactagattgattatgaggagagtagttggtgggataagtaaagttgtccac 175
Query: 819 ttgaacacatatagctcagcaaagtcgccatcctcatcagatgcctttgaggtaactgtg 878
||||||| ||||||||| | ||| || ||||| ||||| ||||| ||||| || || ||
Sbjct: 174 ttgaacatatatagctcggtaaaatcaccatcttcatcggatgcttttgaagtgacagta 115
Query: 879 aagttggtatcaatcccagccaacactttcagcag 913
|| |||||||| || ||||| | |||||||||||
Sbjct: 114 aaattggtatctattccagcaaggactttcagcag 80
>gb|DV465848.1|DV465848 MTUNUL1.P43.H11 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 879
Score = 85.7 bits (43), Expect = 1e-014
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 1398 atatcctctgtaactgaaccatagatccagccaatctcttttccccattcagttttgtcc 1457
|||||||| || ||||||||||| ||||| ||||||||||||||||||||||| || ||
Sbjct: 535 atatcctcagtgactgaaccatatatccaaccaatctcttttccccattcagtcttctct 476
Query: 1458 tcgtacccacagctgataacatggatagcttcctt 1492
|| || ||||||| ||| ||||| || ||||||||
Sbjct: 475 tcatagccacagccgatgacatgaattgcttcctt 441
Score = 50.1 bits (25), Expect = 7e-004
Identities = 70/85 (82%)
Strand = Plus / Minus
Query: 1818 tgcctattgaaacagcatcctgttcccacatagactggaccctgaatgccatctagacct 1877
|||||||||||| || || ||||| ||||| ||||| || ||||||||||| | |||
Sbjct: 118 tgcctattgaaaacacaaccagttcctacatatactggtccttgaatgccatccaaccct 59
Query: 1878 ttcatgttgatatcaaagaagacta 1902
|||||||| | ||||||||| ||||
Sbjct: 58 ttcatgttaacatcaaagaaaacta 34
Score = 48.1 bits (24), Expect = 0.003
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 1233 ggacaatgtctgctaagcagaatttccactgacccaagagcccaacggagcacctg 1288
||||| |||||||||| | ||||||||| || ||||||||||| ||||| |||||
Sbjct: 700 ggacagtgtctgctaaagaaaatttccacagaaccaagagcccatcggaggacctg 645
>gb|DV466748.1|DV466748 MTUNUL1.P9.G02 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 831
Score = 85.7 bits (43), Expect = 1e-014
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 1398 atatcctctgtaactgaaccatagatccagccaatctcttttccccattcagttttgtcc 1457
|||||||| || ||||||||||| ||||| ||||||||||||||||||||||| || ||
Sbjct: 305 atatcctcagtgactgaaccatatatccaaccaatctcttttccccattcagtcttctct 246
Query: 1458 tcgtacccacagctgataacatggatagcttcctt 1492
|| || ||||||| ||| ||||| || ||||||||
Sbjct: 245 tcatagccacagccgatgacatgaattgcttcctt 211
Score = 48.1 bits (24), Expect = 0.003
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 1233 ggacaatgtctgctaagcagaatttccactgacccaagagcccaacggagcacctg 1288
||||| |||||||||| | ||||||||| || ||||||||||| ||||| |||||
Sbjct: 470 ggacagtgtctgctaaagaaaatttccacagaaccaagagcccatcggaggacctg 415
Score = 42.1 bits (21), Expect = 0.16
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 876 gtgaagttggtatcaatcccagccaacactttcagcagaccctggaacaccgcgaagaga 935
|||||||| ||||| || |||||||||| ||| | | |||||||| ||||| ||||||
Sbjct: 830 gtgaagttcgtatcgatgccagccaacatttttaagaatccctggaagaccgcaaagaga 771
Query: 936 tgggc 940
|||||
Sbjct: 770 tgggc 766
>gb|CF232837.1|CF232837 PtaJXO0016D5D0507 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 770
Score = 83.8 bits (42), Expect = 5e-014
Identities = 96/114 (84%)
Strand = Plus / Minus
Query: 1376 atgcattttaaacccagtcagaatatcctctgtaactgaaccatagatccagccaatctc 1435
|||||| ||||| || ||||||||||||||||| | |||||| || |||||||| | |||
Sbjct: 211 atgcatcttaaaacctgtcagaatatcctctgtgattgaaccgtaaatccagcccagctc 152
Query: 1436 ttttccccattcagttttgtcctcgtacccacagctgataacatggatagcttc 1489
|||||||||||| ||||| || |||||||| ||||| |||||||| |||||
Sbjct: 151 gagtccccattcagtcttgtcttcatacccacaactgatcacatggatggcttc 98
>gb|AF081534.1|AF081534 Populus x canescens cellulose synthase (cel1) mRNA, complete cds
Length = 3395
Score = 83.8 bits (42), Expect = 5e-014
Identities = 107/126 (84%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 1796 aggatcatatccatacaaagcctgcctattgaa-acagcatcctgttcccacatagactg 1854
||||||||| |||||||| | |||||| ||||| ||| ||||| || || ||||| ||||
Sbjct: 1805 aggatcatagccatacaaggactgcctgttgaagaca-catccagtaccaacatatactg 1747
Query: 1855 gaccctgaatgccatctagacctttcatgttgatatcaaagaagactatgttccgattag 1914
| || |||| |||||||||||||||||||| ||||||||||| || | ||| |||||||
Sbjct: 1746 gcccttgaaccccatctagacctttcatgtttatatcaaagaacacaacgttgcgattag 1687
Query: 1915 catatc 1920
||||||
Sbjct: 1686 catatc 1681
Score = 75.8 bits (38), Expect = 1e-011
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 2334 ttgattcttattttgaattcttcatactctctcttcattgctcgtctttccttaacaaat 2393
||||| |||| ||||||||||||||| ||||| ||||| |||| | ||||| |||||
Sbjct: 1267 ttgatccttactttgaattcttcatattctcttttcatagctctgcgctccttcacaaag 1208
Query: 2394 gaaggttgaattttgtccttcaggtaatctattttttgagcaaagtaaaattctggagct 2453
|| || | |||||| |||| ||| || || || |||| ||||| || || |||||
Sbjct: 1207 ttgggatgcactttgtctttcaagtagtcaatcttctgagtgaagtagaactcaggagcc 1148
Query: 2454 cttggttcaatattgtgcttcttacaaaagggaacccactttctagcaaattcggcagtt 2513
||||| ||||| || |||||||| ||||| |||||||||||||||||||| || ||||||
Sbjct: 1147 cttggctcaatgttatgcttcttgcaaaatggaacccactttctagcaaactcagcagtt 1088
Query: 2514 tc 2515
||
Sbjct: 1087 tc 1086
Score = 69.9 bits (35), Expect = 7e-010
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 1989 ggatccatcatgaagcacattgcttctctaagagctttgctgctattgaagtaatggtca 2048
|||||||||| |||||||| |||||||| | ||| |||||| |||||| ||||||||||
Sbjct: 1612 ggatccatcaaaaagcacatggcttctcttacagccttgctgttattgatgtaatggtca 1553
Query: 2049 caatcca 2055
|||||||
Sbjct: 1552 caatcca 1546
Score = 54.0 bits (27), Expect = 4e-005
Identities = 69/83 (83%)
Strand = Plus / Minus
Query: 2756 ccattttgggaactgatctagaagccaggacaaggcaaaccagacctcacagataacaga 2815
||||||||||||||| || || | |||||| | | ||||||| |||||||| || |||||
Sbjct: 845 ccattttgggaactggtcaaggatccaggagaggccaaaccatacctcacatattacaga 786
Query: 2816 tactagccacaatccataagcat 2838
| ||||||||| |||||||||
Sbjct: 785 gataagccacaatgcataagcat 763
>gb|AF527387.1| Populus tremuloides xylem-specific cellulose synthase (CesA3) mRNA,
complete cds
Length = 3401
Score = 83.8 bits (42), Expect = 5e-014
Identities = 107/126 (84%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 1796 aggatcatatccatacaaagcctgcctattgaa-acagcatcctgttcccacatagactg 1854
||||||||| |||||||| | |||||| ||||| ||| ||||| || || ||||| ||||
Sbjct: 1817 aggatcatagccatacaaggactgcctgttgaagaca-catccagtaccaacatatactg 1759
Query: 1855 gaccctgaatgccatctagacctttcatgttgatatcaaagaagactatgttccgattag 1914
| || |||| |||||||||||||||||||| ||||||||||| || | ||| |||||||
Sbjct: 1758 gcccttgaaccccatctagacctttcatgtttatatcaaagaacacaacgttgcgattag 1699
Query: 1915 catatc 1920
||||||
Sbjct: 1698 catatc 1693
Score = 69.9 bits (35), Expect = 7e-010
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 1989 ggatccatcatgaagcacattgcttctctaagagctttgctgctattgaagtaatggtca 2048
|||||||||| |||||||| |||||||| | ||| |||||| |||||| ||||||||||
Sbjct: 1624 ggatccatcaaaaagcacatggcttctcttacagccttgctgttattgatgtaatggtca 1565
Query: 2049 caatcca 2055
|||||||
Sbjct: 1564 caatcca 1558
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 2334 ttgattcttattttgaattcttcatactctctcttcattgctcgtctttccttaacaaat 2393
||||| |||| ||||||||||||||| ||||| ||||| |||| | ||||| |||||
Sbjct: 1279 ttgatccttactttgaattcttcatattctcttttcatagctctgcgctccttcacaaag 1220
Query: 2394 gaaggttgaattttgtccttcaggtaatctattttttgagcaaagtaaaattctggagct 2453
|| || | |||||| |||| ||| || || || |||| ||||| || || |||||
Sbjct: 1219 ttgggatgcactttgtctttcaagtagtcaatcttctgagtgaagtagaactcaggagcc 1160
Query: 2454 cttggttcaatattgtgcttcttacaaaagggaacccactttctagcaaattcggcagtt 2513
||||| ||||| || |||||||| ||||| ||||||||| |||||||||| || ||||||
Sbjct: 1159 cttggctcaatgttatgcttcttgcaaaatggaacccaccttctagcaaactcagcagtt 1100
Query: 2514 tc 2515
||
Sbjct: 1099 tc 1098
>gb|AY573571.1| Populus tremula x Populus tremuloides cellulose synthase (CesA1)
mRNA, complete cds
Length = 3472
Score = 83.8 bits (42), Expect = 5e-014
Identities = 107/126 (84%), Gaps = 2/126 (1%)
Strand = Plus / Minus
Query: 1796 aggatcatatccatacaaagcctgcctattgaa-acagcatcctgttcccacatagactg 1854
||||||||| |||||||| | |||||| ||||| ||| ||||| || || ||||| ||||
Sbjct: 1889 aggatcatagccatacaaggactgcctgttgaagaca-catccagtaccaacatatactg 1831
Query: 1855 gaccctgaatgccatctagacctttcatgttgatatcaaagaagactatgttccgattag 1914
| || |||| |||||||||||||||||||| ||||||||||| || | ||| |||||||
Sbjct: 1830 gcccttgaaccccatctagacctttcatgtttatatcaaagaacacaacgttgcgattag 1771
Query: 1915 catatc 1920
||||||
Sbjct: 1770 catatc 1765
Score = 69.9 bits (35), Expect = 7e-010
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 1989 ggatccatcatgaagcacattgcttctctaagagctttgctgctattgaagtaatggtca 2048
|||||||||| |||||||| |||||||| | ||| |||||| |||||| ||||||||||
Sbjct: 1696 ggatccatcaaaaagcacatggcttctcttacagccttgctgttattgatgtaatggtca 1637
Query: 2049 caatcca 2055
|||||||
Sbjct: 1636 caatcca 1630
Score = 67.9 bits (34), Expect = 3e-009
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 2334 ttgattcttattttgaattcttcatactctctcttcattgctcgtctttccttaacaaat 2393
||||| |||| ||||||||||||||| ||||| ||||| |||| | ||||| |||||
Sbjct: 1351 ttgatccttactttgaattcttcatattctcttttcatagctctgcgctccttcacaaag 1292
Query: 2394 gaaggttgaattttgtccttcaggtaatctattttttgagcaaagtaaaattctggagct 2453
|| || | |||||| |||| ||| || || || |||| ||||| || || |||||
Sbjct: 1291 ttgggatgcactttgtctttcaagtagtcaatcttctgagtgaagtagaactcaggagcc 1232
Query: 2454 cttggttcaatattgtgcttcttacaaaagggaacccactttctagcaaattcggcagtt 2513
||||| ||||| || |||||||| ||||| ||||||||| |||||||||| || ||||||
Sbjct: 1231 cttggctcaatgttatgcttcttgcaaaatggaacccaccttctagcaaactcagcagtt 1172
Query: 2514 tc 2515
||
Sbjct: 1171 tc 1170
Score = 46.1 bits (23), Expect = 0.010
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 2756 ccattttgggaactgatctagaagccaggacaaggcaaaccagacctcacagataacaga 2815
||||||||||||| | || || | |||||| | | ||||||| |||||||| || |||||
Sbjct: 929 ccattttgggaaccggtcaaggatccaggagaggccaaaccatacctcacatattacaga 870
Query: 2816 tactagccacaatccataagcat 2838
| ||||||||| |||||||||
Sbjct: 869 gataagccacaatgcataagcat 847
>gb|AI162302.1|AI162302 A015P47U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 445
Score = 79.8 bits (40), Expect = 7e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 1398 atatcctctgtaactgaaccatagatccagccaatctcttttccccattcagttttgtcc 1457
|||||||||||||| || ||||| |||||||||| || ||||||||||| ||||| ||
Sbjct: 325 atatcctctgtaacagagccatatatccagccaacttcctttccccattctgttttatct 266
Query: 1458 tcgtacccacagctgataacatggatagcttc 1489
|| || |||||||||||||| ||||| |||||
Sbjct: 265 tcataaccacagctgataacttggatggcttc 234
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 517,135
Number of Sequences: 369679
Number of extensions: 517135
Number of successful extensions: 148691
Number of sequences better than 0.5: 165
Number of HSP's better than 0.5 without gapping: 163
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 147995
Number of HSP's gapped (non-prelim): 636
length of query: 3896
length of database: 203,408,664
effective HSP length: 20
effective length of query: 3876
effective length of database: 196,015,084
effective search space: 759754465584
effective search space used: 759754465584
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)