BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2419155.2.3
(1354 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX654157.1|CX654157 PO02013H12 Poplar SC cDNA library Po... 184 6e-045
gb|CK110273.1|CK110273 N055B04 Populus bark cDNA library Po... 180 9e-044
gb|CV228385.1|CV228385 WS0191.B21_O14 PT-DX-N-A-10 Populus ... 180 9e-044
gb|AF194820.1|AF194820 Populus tremula x Populus tremuloide... 180 9e-044
gb|BU836577.1|BU836577 T088C08 Populus apical shoot cDNA li... 176 1e-042
gb|CN524250.1|CN524250 GQ015M16.T3_C08 GQ015 Populus tricho... 172 2e-041
gb|DT487479.1|DT487479 WS02533.B21_N01 PT-MB-N-A-15 Populus... 172 2e-041
gb|CV240946.1|CV240946 WS02510.B21_M19 PT-MB-N-A-15 Populus... 168 4e-040
gb|DT494467.1|DT494467 WS01118.BR.1_I05 PT-P-FL-A-2 Populus... 163 2e-038
gb|DT497156.1|DT497156 WS01125.BR_K07 PT-P-FL-A-2 Populus t... 161 9e-038
gb|CX174905.1|CX174905 E10_69-47_10.ab1 leaf inoculated wit... 153 2e-035
gb|BU892125.1|BU892125 P059F10 Populus petioles cDNA librar... 137 1e-030
gb|BU894542.1|BU894542 X011A02 Populus wood cDNA library Po... 129 3e-028
gb|BU830146.1|BU830146 T004E06 Populus apical shoot cDNA li... 123 2e-026
gb|BU884338.1|BU884338 R009C11 Populus root cDNA library Po... 123 2e-026
gb|BU888190.1|BU888190 P004H03 Populus petioles cDNA librar... 123 2e-026
gb|CK111884.1|CK111884 R024E12 Populus root cDNA library Po... 115 5e-024
gb|CN519868.1|CN519868 GQ0106.B3_P23 GQ010 Populus trichoca... 113 2e-023
gb|CV234910.1|CV234910 WS01216.B21_O05 PT-GT-FL-A-3 Populus... 113 2e-023
gb|CV247738.1|CV247738 WS01119.B21_C19 PT-P-FL-A-2 Populus ... 113 2e-023
gb|CV250821.1|CV250821 WS0114.B21_O04 PT-P-FL-A-2 Populus t... 113 2e-023
gb|DT498274.1|DT498274 WS0114.BR_O04 PT-P-FL-A-2 Populus tr... 113 2e-023
gb|BU894562.1|BU894562 X011C11 Populus wood cDNA library Po... 103 2e-020
gb|CV248105.1|CV248105 WS0112.B21_H06 PT-P-FL-A-2 Populus t... 101 7e-020
gb|CX170119.1|CX170119 E07_69-54_09.ab1 leaf inoculated wit... 100 3e-019
gb|DT494692.1|DT494692 WS01119.BR_C19 PT-P-FL-A-2 Populus t... 100 3e-019
gb|BU813799.1|BU813799 N015B11 Populus bark cDNA library Po... 98 1e-018
gb|CV253345.1|CV253345 WS0221.B21_K06 PTxD-ICC-A-12 Populus... 96 4e-018
gb|BU884896.1|BU884896 R017D10 Populus root cDNA library Po... 94 2e-017
gb|BU888794.1|BU888794 P012F01 Populus petioles cDNA librar... 94 2e-017
gb|BU876836.1|BU876836 V025H09 Populus flower cDNA library ... 92 7e-017
gb|BU879286.1|BU879286 V058C10 Populus flower cDNA library ... 92 7e-017
gb|BU879563.1|BU879563 V061G08 Populus flower cDNA library ... 92 7e-017
gb|AJ775897.1|AJ775897 AJ775897 Populus euphratica root 3-6... 92 7e-017
gb|CX182339.1|CX182339 B11_45-96_03.ab1 leaf inoculated wit... 92 7e-017
gb|CX187188.1|CX187188 F05_45-47_11.ab1 leaf inoculated wit... 92 7e-017
gb|BU862326.1|BU862326 S014C04 Populus imbibed seed cDNA li... 90 3e-016
gb|CV247539.1|CV247539 WS01118.B21_I05 PT-P-FL-A-2 Populus ... 86 4e-015
gb|BU889857.1|BU889857 P026E12 Populus petioles cDNA librar... 84 2e-014
gb|CX183758.1|CX183758 D03_45-83_07.ab1 leaf inoculated wit... 84 2e-014
gb|DT495121.1|DT495121 WS0112.BR_H06 PT-P-FL-A-2 Populus tr... 84 2e-014
gb|CV272767.1|CV272767 WS0158.B21_K06 PTxN-IB-A-6 Populus t... 56 4e-006
gb|DT469449.1|DT469449 WS01917.C21_N02 PT-DX-N-A-10 Populus... 56 4e-006
gb|BU813388.1|BU813388 N009H03 Populus bark cDNA library Po... 54 1e-005
gb|BI127708.1|BI127708 G064P65Y Populus cambium cDNA librar... 42 0.055
gb|BU826080.1|BU826080 UK116TD07 Populus apical shoot cDNA ... 42 0.055
gb|BU826475.1|BU826475 UK121TB05 Populus apical shoot cDNA ... 42 0.055
gb|BU878975.1|BU878975 V054B08 Populus flower cDNA library ... 42 0.055
gb|BU890314.1|BU890314 P034H06 Populus petioles cDNA librar... 42 0.055
gb|CX185687.1|CX185687 A01_45-58_01.ab1 leaf inoculated wit... 40 0.22
>gb|CX654157.1|CX654157 PO02013H12 Poplar SC cDNA library Populus alba x Populus tremula var.
glandulosa cDNA clone PO02013H12 5', mRNA sequence
Length = 660
Score = 184 bits (93), Expect = 6e-045
Identities = 375/469 (79%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 192 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 251
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttggtttagccagg 694
|| || | || ||||| || || || || |||||||||||||| |||||| | || ||
Sbjct: 252 aatttgcttattgatcgccgtaccaacgcgctgaagcttgcagattttggtctggctaga 311
Query: 695 gcatttggaattcctgtccgtacatttactcatgaggtagtgacattatggtacagagct 754
|||||||| || ||||| | |||||||| |||||||| || || | ||||| |||||
Sbjct: 312 gcatttggtatacctgttaggacatttacacatgaggttgttaccctgtggtatagagcc 371
Query: 755 ccagaaattctgcttggagcgaggcagtattccacaccagttgatgtgtggtctgtgggc 814
|| ||||||||||||||| | | || || || || ||||||||||||||||| |||||
Sbjct: 372 cctgaaattctgcttggatctcgccattactcaactccagttgatgtgtggtcggtggga 431
Query: 815 tgtatctttgcggaaatggtgaaccaaaagccactattccctggcgattctgagatcgac 874
||||| ||||| || ||||||||||| |||||| ||||||| || ||||| ||||| ||
Sbjct: 432 tgtatatttgctgagatggtgaaccagaagccattattcccaggggattccgagattgat 491
Query: 875 gaactttttaagatattcaggatactaggtacaccgaatgagcagagttggccaggagtc 934
||||| || || || ||||| || | ||||| || |||||| | | ||||| |||||
Sbjct: 492 gaactattcaaaattttcagaatcttgggtactccaaatgaggacacgtggcctggagtt 551
Query: 935 agttgtttgcctgacttcaagacagctttccccaggtggcaagctcaggacctggcaaca 994
| || |||||| |||||||||| || ||||| | ||||| || |||| |||||||
Sbjct: 552 acttctttgcccgacttcaagagtgcattccctaagtggccttctaaggatttggcaact 611
Query: 995 gtagtcccaaatcttgaccctgctgggttggaccttctctctaaaatgc 1043
||||| |||| |||||| ||||| |||| ||||||||||||||||
Sbjct: 612 gtagttccaactcttgaaaaagctggtgtggatcttctctctaaaatgc 660
>gb|CK110273.1|CK110273 N055B04 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA clone N055B04 5', mRNA sequence
Length = 811
Score = 180 bits (91), Expect = 9e-044
Identities = 376/471 (79%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 63 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 122
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttggtttagccagg 694
|| || | || ||||| || || || || |||||||||||||| |||||| | || ||
Sbjct: 123 aatttgcttattgatcgccgtaccaacgctctgaagcttgcagattttggtctggctaga 182
Query: 695 gcatttggaattcctgtccgtacatttactcatgaggtagtgacattatggtacagagct 754
|||||||| || ||||| | |||||||| |||||||| || || | ||||| |||||
Sbjct: 183 gcatttggtatacctgttaggacatttacacatgaggttgttaccctgtggtatagagcc 242
Query: 755 ccagaaattctgcttggagcgaggcagtattccacaccagttgatgtgtggtctgtgggc 814
|| ||||||||||||||| | | || || || || ||||||||||||||||| |||||
Sbjct: 243 cctgaaattctgcttggatctcgccattactcaactccagttgatgtgtggtcggtggga 302
Query: 815 tgtatctttgcggaaatggtgaaccaaaagccactattccctggcgattctgagatcgac 874
||||| ||||| || ||||||||||| |||||| ||||||| || ||||| ||||| ||
Sbjct: 303 tgtatatttgctgagatggtgaaccagaagccattattcccaggggattccgagattgat 362
Query: 875 gaactttttaagatattcaggatactaggtacaccgaatgagcagagttggccaggagtc 934
||||| || || || ||||| || | ||||| || |||||| | | ||||| |||||
Sbjct: 363 gaactattcaaaattttcagaatcttgggtactccaaatgaggacacgtggcctggagtt 422
Query: 935 agttgtttgcctgacttcaagacagctttccccaggtggcaagctcaggacctggcaaca 994
| || |||||| |||||||||| || ||||| | ||||| || |||| |||||||
Sbjct: 423 acttctttgcccgacttcaagagtgcattccctaagtggccttctaaggatttggcaact 482
Query: 995 gtagtcccaaatcttgaccctgctgggttggaccttctctctaaaatgctt 1045
||||| |||| ||||| ||||| |||| ||||||||||||||||||
Sbjct: 483 gtagttccaacccttgaaaaagctggtgtggatcttctctctaaaatgctt 533
>gb|CV228385.1|CV228385 WS0191.B21_O14 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS0191_O14
3', mRNA sequence
Length = 894
Score = 180 bits (91), Expect = 9e-044
Identities = 376/471 (79%)
Strand = Plus / Minus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 811 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 752
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttggtttagccagg 694
|| || | || ||||| || || || || |||||||||||||| ||||| | || ||
Sbjct: 751 aatttgcttattgatcgccgtaccaacgcgctgaagcttgcagattttggactggctaga 692
Query: 695 gcatttggaattcctgtccgtacatttactcatgaggtagtgacattatggtacagagct 754
|||||||| || ||||| | |||||||| |||||||| || || | ||||| |||||
Sbjct: 691 gcatttggtatacctgttaggacatttacacatgaggttgttaccctgtggtatagagcc 632
Query: 755 ccagaaattctgcttggagcgaggcagtattccacaccagttgatgtgtggtctgtgggc 814
|| ||||||||||||||| | | || || || || ||||||||||||||||| |||||
Sbjct: 631 cctgaaattctgcttggatctcgccattactcgactccagttgatgtgtggtcagtggga 572
Query: 815 tgtatctttgcggaaatggtgaaccaaaagccactattccctggcgattctgagatcgac 874
||||| ||||| || ||||||||||| |||||| | ||||| || ||||| ||||| ||
Sbjct: 571 tgtatatttgctgagatggtgaaccagaagccattgttcccaggggattcggagattgat 512
Query: 875 gaactttttaagatattcaggatactaggtacaccgaatgagcagagttggccaggagtc 934
||||| || || || ||||| || | ||||| || |||||| | | ||||| |||||
Sbjct: 511 gaactattcaaaattttcagaatcttgggtactccaaatgaggacacctggcctggagtt 452
Query: 935 agttgtttgcctgacttcaagacagctttccccaggtggcaagctcaggacctggcaaca 994
| || |||||| |||||||||| || ||||||| ||||| || |||| |||||||
Sbjct: 451 acttctttgcccgacttcaagagtgcattccccaagtggccttctaaggatttggcaact 392
Query: 995 gtagtcccaaatcttgaccctgctgggttggaccttctctctaaaatgctt 1045
||||| |||| |||||| ||||| |||| ||||||||||||||||||
Sbjct: 391 gtagttccaactcttgaaaaagctggtgtggatcttctctctaaaatgctt 341
>gb|AF194820.1|AF194820 Populus tremula x Populus tremuloides CDC2 homolog mRNA, complete cds
Length = 1332
Score = 180 bits (91), Expect = 9e-044
Identities = 376/471 (79%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 525 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 584
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttggtttagccagg 694
|| || | || ||||| || || || || |||||||||||||| |||||| | || ||
Sbjct: 585 aatttgcttattgatcgccgtaccaacgctctgaagcttgcagattttggtctggctaga 644
Query: 695 gcatttggaattcctgtccgtacatttactcatgaggtagtgacattatggtacagagct 754
|||||||| || ||||| | |||||||| |||||||| || || | ||||| |||||
Sbjct: 645 gcatttggtatacctgttaggacatttacacatgaggttgttaccctgtggtatagagcc 704
Query: 755 ccagaaattctgcttggagcgaggcagtattccacaccagttgatgtgtggtctgtgggc 814
|| ||||||||||||||| | | || || || || ||||||||||||||||| |||||
Sbjct: 705 cctgaaattctgcttggatctcgccattactcaactccagttgatgtgtggtcggtggga 764
Query: 815 tgtatctttgcggaaatggtgaaccaaaagccactattccctggcgattctgagatcgac 874
||||| ||||| || ||||||||||| |||||| ||||||| || ||||| ||||| ||
Sbjct: 765 tgtatatttgctgagatggtgaaccagaagccattattcccaggggattccgagattgat 824
Query: 875 gaactttttaagatattcaggatactaggtacaccgaatgagcagagttggccaggagtc 934
||||| || || || ||||| || | ||||| || |||||| | | ||||| |||||
Sbjct: 825 gaactattcaaaattttcagaatcttgggtactccaaatgaggacacgtggcctggagtt 884
Query: 935 agttgtttgcctgacttcaagacagctttccccaggtggcaagctcaggacctggcaaca 994
| || |||||| |||||||||| || ||||| | ||||| || |||| |||||||
Sbjct: 885 acttctttgcccgacttcaagagtgcattccctaagtggccttctaaggatttggcaact 944
Query: 995 gtagtcccaaatcttgaccctgctgggttggaccttctctctaaaatgctt 1045
||||| |||| ||||| ||||| |||| ||||||||||||||||||
Sbjct: 945 gtagttccaacccttgaaaaagctggtgtggatcttctctctaaaatgctt 995
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 288 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 347
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 348 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 407
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 408 gagaagcgc 416
>gb|BU836577.1|BU836577 T088C08 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 668
Score = 176 bits (89), Expect = 1e-042
Identities = 251/305 (82%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 312 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 371
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttggtttagccagg 694
|| || | || ||||| || || || || |||||||||||||| |||||| | || ||
Sbjct: 372 aatttgcttattgatcgccgtaccaacgctctgaagcttgcagattttggtctggctaga 431
Query: 695 gcatttggaattcctgtccgtacatttactcatgaggtagtgacattatggtacagagct 754
|||||||| || ||||| | |||||||| |||||||| || || | ||||| |||||
Sbjct: 432 gcatttggtatacctgttaggacatttacacatgaggttgttaccctgtggtatagagcc 491
Query: 755 ccagaaattctgcttggagcgaggcagtattccacaccagttgatgtgtggtctgtgggc 814
|| ||||||||||||||| | | || || || || ||||||||||||||||| |||||
Sbjct: 492 cctgaaattctgcttggatctcgccattactcaactccagttgatgtgtggtcggtggga 551
Query: 815 tgtatctttgcggaaatggtgaaccaaaagccactattccctggcgattctgagatcgac 874
||||| ||||| || ||||||||||| |||||| ||||||| || ||||| ||||| ||
Sbjct: 552 tgtatatttgctgagatggtgaaccagaagccattattcccaggggattccgagattgat 611
Query: 875 gaact 879
|||||
Sbjct: 612 gaact 616
>gb|CN524250.1|CN524250 GQ015M16.T3_C08 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M16_C08 5', mRNA sequence
Length = 810
Score = 172 bits (87), Expect = 2e-041
Identities = 375/471 (79%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 118 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 177
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttggtttagccagg 694
|| || | || ||||| || || || || |||||||||||||| ||||| | || ||
Sbjct: 178 aatttgcttattgatcgccgtaccaacgcgctgaagcttgcagattttggactggctaga 237
Query: 695 gcatttggaattcctgtccgtacatttactcatgaggtagtgacattatggtacagagct 754
|||||||| || ||||| | |||||||| |||||||| || || | ||||| |||||
Sbjct: 238 gcatttggtatacctgttaggacatttacacatgaggttgttaccctgtggtatagagcc 297
Query: 755 ccagaaattctgcttggagcgaggcagtattccacaccagttgatgtgtggtctgtgggc 814
|| ||||||||||||||| | | || || || || ||||||||||||||||| |||||
Sbjct: 298 cctgaaattctgcttggatctcgccattactcgactccagttgatgtgtggtcagtggga 357
Query: 815 tgtatctttgcggaaatggtgaaccaaaagccactattccctggcgattctgagatcgac 874
||||| ||||| || ||||||||||| |||||| | ||||| || ||||| ||||| ||
Sbjct: 358 tgtatatttgctgagatggtgaaccagaagccattgttcccaggggattcggagattgat 417
Query: 875 gaactttttaagatattcaggatactaggtacaccgaatgagcagagttggccaggagtc 934
||||| || || || ||||| || | ||||| || |||||| | | ||||| |||||
Sbjct: 418 gaactattcaaaattttcagaatcttgggtactccaaatgaggacacctggcctggagtt 477
Query: 935 agttgtttgcctgacttcaagacagctttccccaggtggcaagctcaggacctggcaaca 994
| || |||||| |||||||||| || ||||| | ||||| || |||| |||||||
Sbjct: 478 acttctttgcccgacttcaagagtgcattccctaagtggccttctaaggatttggcaact 537
Query: 995 gtagtcccaaatcttgaccctgctgggttggaccttctctctaaaatgctt 1045
||||| |||| |||||| ||||| |||| ||||||||||||||||||
Sbjct: 538 gtagttccaactcttgaaaaagctggtgtggatcttctctctaaaatgctt 588
>gb|DT487479.1|DT487479 WS02533.B21_N01 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02533_N01 3', mRNA sequence
Length = 950
Score = 172 bits (87), Expect = 2e-041
Identities = 375/471 (79%)
Strand = Plus / Minus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 802 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 743
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttggtttagccagg 694
|| || | || ||||| || || || || |||||||||||||| ||||| | || ||
Sbjct: 742 aatttgcttattgatcgccgtaccaacgcgctgaagcttgcagattttggactggctaga 683
Query: 695 gcatttggaattcctgtccgtacatttactcatgaggtagtgacattatggtacagagct 754
|||||||| || ||||| | |||||||| |||||||| || || | ||||| |||||
Sbjct: 682 gcatttggtatacctgttaggacatttacacatgaggttgttaccctgtggtatagagcc 623
Query: 755 ccagaaattctgcttggagcgaggcagtattccacaccagttgatgtgtggtctgtgggc 814
|| ||||||||||||||| | | || || || || ||||||||||||||||| |||||
Sbjct: 622 cctgaaattctgcttggatctcgccattactcgactccagttgatgtgtggtcagtggga 563
Query: 815 tgtatctttgcggaaatggtgaaccaaaagccactattccctggcgattctgagatcgac 874
||||| ||||| || ||||||||||| |||||| | ||||| || ||||| ||||| ||
Sbjct: 562 tgtatatttgctgagatggtgaaccagaagccattgttcccaggggattcggagattgat 503
Query: 875 gaactttttaagatattcaggatactaggtacaccgaatgagcagagttggccaggagtc 934
||||| || || || ||||| || | ||||| || |||||| | | ||||| |||||
Sbjct: 502 gaactattcaaaattttcagaatcttgggtactccaaatgaggacacctggcctggagtt 443
Query: 935 agttgtttgcctgacttcaagacagctttccccaggtggcaagctcaggacctggcaaca 994
| || |||||| |||||||||| || ||||| | ||||| || |||| |||||||
Sbjct: 442 acttctttgcccgacttcaagagtgcattccctaagtggccttctaaggatttggcaact 383
Query: 995 gtagtcccaaatcttgaccctgctgggttggaccttctctctaaaatgctt 1045
||||| |||| |||||| ||||| |||| ||||||||||||||||||
Sbjct: 382 gtagttccaactcttgaaaaagctggcgtggatcttctctctaaaatgctt 332
>gb|CV240946.1|CV240946 WS02510.B21_M19 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02510_M19 3', mRNA sequence
Length = 789
Score = 168 bits (85), Expect = 4e-040
Identities = 367/461 (79%)
Strand = Plus / Minus
Query: 585 ttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcagaacttattga 644
|||| ||||||||||||||||||||||| || |||||||||||||||||||| || | |
Sbjct: 786 ttgcttactgccattctcatagagttctgcatcgagatttgaaacctcagaatttgctta 727
Query: 645 tagatcggcgcactaatgcactgaagcttgcagactttggtttagccagggcatttggaa 704
| ||||| || || || || |||||||||||||| ||||| | || || |||||||| |
Sbjct: 726 ttgatcgccgtaccaacgcgctgaagcttgcagattttggactggctagagcatttggta 667
Query: 705 ttcctgtccgtacatttactcatgaggtagtgacattatggtacagagctccagaaattc 764
| ||||| | |||||||| |||||||| || || | ||||| ||||| || |||||||
Sbjct: 666 tacctgttaggacatttacacatgaggttgttaccctgtggtatagagcccctgaaattc 607
Query: 765 tgcttggagcgaggcagtattccacaccagttgatgtgtggtctgtgggctgtatctttg 824
|||||||| | | || || || || ||||||||||||||||| ||||| ||||| ||||
Sbjct: 606 tgcttggatctcgccattactcgactccagttgatgtgtggtcagtgggatgtatatttg 547
Query: 825 cggaaatggtgaaccaaaagccactattccctggcgattctgagatcgacgaacttttta 884
| || ||||||||||| |||||| | ||||| || ||||| ||||| || ||||| || |
Sbjct: 546 ctgagatggtgaaccagaagccattgttcccaggggattcggagattgatgaactattca 487
Query: 885 agatattcaggatactaggtacaccgaatgagcagagttggccaggagtcagttgtttgc 944
| || ||||| || | ||||| || |||||| | | ||||| ||||| | || |||||
Sbjct: 486 aaattttcagaatcttgggtactccaaatgaggacacctggcctggagttacttctttgc 427
Query: 945 ctgacttcaagacagctttccccaggtggcaagctcaggacctggcaacagtagtcccaa 1004
| |||||||||| || ||||| | ||||| || |||| ||||||| ||||| ||||
Sbjct: 426 ccgacttcaagagtgcattccctaagtggccttctaaggatttggcaactgtagttccaa 367
Query: 1005 atcttgaccctgctgggttggaccttctctctaaaatgctt 1045
|||||| ||||| |||| ||||||||||||||||||
Sbjct: 366 ctcttgaaaaagctggcgtggatcttctctctaaaatgctt 326
>gb|DT494467.1|DT494467 WS01118.BR.1_I05 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01118_I05 5', mRNA sequence
Length = 908
Score = 163 bits (82), Expect = 2e-038
Identities = 307/382 (80%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 433 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 492
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttggtttagccagg 694
|| || | || ||||| || || || || |||||||||||||| ||||| | || ||
Sbjct: 493 aatttgcttattgatcgccgtaccaacgcgctgaagcttgcagattttggactggctaga 552
Query: 695 gcatttggaattcctgtccgtacatttactcatgaggtagtgacattatggtacagagct 754
|||||||| || ||||| | |||||||| |||||||| || || | ||||| |||||
Sbjct: 553 gcatttggtatacctgttaggacatttacacatgaggttgttaccctgtggtatagagcc 612
Query: 755 ccagaaattctgcttggagcgaggcagtattccacaccagttgatgtgtggtctgtgggc 814
|| ||||||||||||||| | | || || || || ||||||||||||||||| |||||
Sbjct: 613 cctgaaattctgcttggatctcgccattactcgactccagttgatgtgtggtcagtggga 672
Query: 815 tgtatctttgcggaaatggtgaaccaaaagccactattccctggcgattctgagatcgac 874
||||| ||||| || ||||||||||| |||||| | ||||| || ||||| ||||| ||
Sbjct: 673 tgtatatttgctgagatggtgaaccagaagccattgttcccaggggattcggagattgat 732
Query: 875 gaactttttaagatattcaggatactaggtacaccgaatgagcagagttggccaggagtc 934
||||| || || || ||||| || | ||||| || |||||| | | ||||| |||||
Sbjct: 733 gaactattcaaaattttcagaatcttgggtactccaaatgaggacacctggcctggagtt 792
Query: 935 agttgtttgcctgacttcaaga 956
| || |||||| ||||||||||
Sbjct: 793 acttctttgcccgacttcaaga 814
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 196 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 255
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 256 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 315
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 316 gagaagcgc 324
>gb|DT497156.1|DT497156 WS01125.BR_K07 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01125_K07 5', mRNA sequence
Length = 892
Score = 161 bits (81), Expect = 9e-038
Identities = 249/305 (81%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 541 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 600
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttggtttagccagg 694
|| || | || ||||| || || || || |||||||||||||| ||||| | || ||
Sbjct: 601 aatttgcttattgatcgccgtaccaacgcgctgaagcttgcagattttggactggctaga 660
Query: 695 gcatttggaattcctgtccgtacatttactcatgaggtagtgacattatggtacagagct 754
|||||||| || ||||| | |||||||| |||||||| || || | ||||| |||||
Sbjct: 661 gcatttggtatacctgttaggacatttacacatgaggttgttaccctgtggtatagagcc 720
Query: 755 ccagaaattctgcttggagcgaggcagtattccacaccagttgatgtgtggtctgtgggc 814
|| ||||||||||||||| | | || || || || ||||||||||||||||| |||||
Sbjct: 721 cctgaaattctgcttggatctcgccattactcgactccagttgatgtgtggtcagtggga 780
Query: 815 tgtatctttgcggaaatggtgaaccaaaagccactattccctggcgattctgagatcgac 874
||||| ||||| || ||||||||||| |||||| | ||||| || ||||| ||||| ||
Sbjct: 781 tgtatatttgctgagatggtgaaccagaagccattgttcccaggggattcggagattgat 840
Query: 875 gaact 879
|||||
Sbjct: 841 gaact 845
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 304 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 363
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 364 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 423
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 424 gagaagcgc 432
>gb|CX174905.1|CX174905 E10_69-47_10.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 681
Score = 153 bits (77), Expect = 2e-035
Identities = 224/273 (82%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 394 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 453
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttggtttagccagg 694
|| || | || ||||| || || || || |||||||||||||| ||||| | || ||
Sbjct: 454 aatttgcttattgatcgccgtaccaacgcgctgaagcttgcagattttggcctggctaga 513
Query: 695 gcatttggaattcctgtccgtacatttactcatgaggtagtgacattatggtacagagct 754
|||||||| || ||||| | |||||||| |||||||| || || | ||||| |||||
Sbjct: 514 gcatttggtatacctgttaggacatttacacatgaggttgttaccctgtggtatagagcc 573
Query: 755 ccagaaattctgcttggagcgaggcagtattccacaccagttgatgtgtggtctgtgggc 814
|| ||||||||||||||| | | || || || || ||||||||||||||||| |||||
Sbjct: 574 cctgaaattctgcttggatctcgccattactcgactccagttgatgtgtggtcagtggga 633
Query: 815 tgtatctttgcggaaatggtgaaccaaaagcca 847
||||| ||||| || ||||||||||| ||||||
Sbjct: 634 tgtatatttgctgagatggtgaaccagaagcca 666
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 157 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 216
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 217 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 276
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 277 gagaagcgc 285
>gb|BU892125.1|BU892125 P059F10 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 699
Score = 137 bits (69), Expect = 1e-030
Identities = 201/245 (82%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 454 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 513
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttggtttagccagg 694
|| || | || ||||| || || || || |||||||||||||| |||||| | || ||
Sbjct: 514 aatttgcttattgatcgccgtaccaacgcgctgaagcttgcagattttggtctggctaga 573
Query: 695 gcatttggaattcctgtccgtacatttactcatgaggtagtgacattatggtacagagct 754
|||||||| || ||||| | |||||||| |||||||| || || | ||||| |||||
Sbjct: 574 gcatttggtatacctgttaggacatttacacatgaggttgttaccctgtggtatagagcc 633
Query: 755 ccagaaattctgcttggagcgaggcagtattccacaccagttgatgtgtggtctgtgggc 814
|| ||||||||||||||| | | || || || || ||||||||||||||||| |||||
Sbjct: 634 cctgaaattctgcttggatctcgccattactcaactccagttgatgtgtggtcggtggga 693
Query: 815 tgtat 819
|||||
Sbjct: 694 tgtat 698
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 217 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 276
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 277 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 336
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 337 gagaagcgc 345
>gb|BU894542.1|BU894542 X011A02 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 688
Score = 129 bits (65), Expect = 3e-028
Identities = 302/381 (79%)
Strand = Plus / Plus
Query: 665 ctgaagcttgcagactttggtttagccagggcatttggaattcctgtccgtacatttact 724
|||||||||||||| |||||| | || || |||||||| || ||||| | ||||||||
Sbjct: 46 ctgaagcttgcagattttggtctggctagagcatttggtatacctgttaggacatttaca 105
Query: 725 catgaggtagtgacattatggtacagagctccagaaattctgcttggagcgaggcagtat 784
|||||||| || || | ||||| ||||| || ||||||||||||||| | | || ||
Sbjct: 106 catgaggttgttaccctgtggtatagagcccctgaaattctgcttggatctcgccattac 165
Query: 785 tccacaccagttgatgtgtggtctgtgggctgtatctttgcggaaatggtgaaccaaaag 844
|| || ||||||||||||||||| ||||| ||||| ||||| || ||||||||||| |||
Sbjct: 166 tcaactccagttgatgtgtggtcggtgggatgtatatttgctgagatggtgaaccagaag 225
Query: 845 ccactattccctggcgattctgagatcgacgaactttttaagatattcaggatactaggt 904
||| ||||||| || ||||| ||||| || ||||| || || || ||||| || | |||
Sbjct: 226 ccattattcccaggagattccgagattgatgaactattcaaaattttcagaatcttgggt 285
Query: 905 acaccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaagacagctttc 964
|| || |||||| | | ||||| ||||| | || |||||| |||||||||| || |||
Sbjct: 286 actccaaatgaggacacgtggcctggagttacttctttgcccgacttcaagagtgcattc 345
Query: 965 cccaggtggcaagctcaggacctggcaacagtagtcccaaatcttgaccctgctgggttg 1024
|| | ||||| || |||| ||||||| ||||| |||| |||||| ||||| ||
Sbjct: 346 cctaagtggccttctaaggatttggcaactgtagttccaactcttgaaaaagctggtgtg 405
Query: 1025 gaccttctctctaaaatgctt 1045
|| ||||||||||||||||||
Sbjct: 406 gatcttctctctaaaatgctt 426
>gb|BU830146.1|BU830146 T004E06 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 353
Score = 123 bits (62), Expect = 2e-026
Identities = 206/254 (81%)
Strand = Plus / Plus
Query: 617 cgagatttgaaacctcagaacttattgatagatcggcgcactaatgcactgaagcttgca 676
|||||||||||||||||||| | | || ||||| || || || || ||||||||||||
Sbjct: 9 cgagatttgaaacctcagaattcgcttattgatcgccgtaccaacgctctgaagcttgca 68
Query: 677 gactttggtttagccagggcatttggaattcctgtccgtacatttactcatgaggtagtg 736
|| |||||| | || || |||||||| || ||||| | |||||||| |||||||| ||
Sbjct: 69 gattttggtctggctagagcatttggtatacctgttaggacatttacacatgaggttgtt 128
Query: 737 acattatggtacagagctccagaaattctgcttggagcgaggcagtattccacaccagtt 796
|| | ||||| ||||| || ||||||||||||||| | | || || || || ||||||
Sbjct: 129 accctgtggtatagagcccctgaaattctgcttggatctcgccattactcaactccagtt 188
Query: 797 gatgtgtggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattccct 856
||||||||||| ||||| ||||| ||||| || ||||||||||| |||||| |||||||
Sbjct: 189 gatgtgtggtcggtgggatgtatatttgctgagatggtgaaccagaagccattattccca 248
Query: 857 ggcgattctgagat 870
|| ||||| |||||
Sbjct: 249 ggggattccgagat 262
>gb|BU884338.1|BU884338 R009C11 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 581
Score = 123 bits (62), Expect = 2e-026
Identities = 164/198 (82%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 369 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 428
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttggtttagccagg 694
|| || | || ||||| || || || || |||||||||||||| |||||| | || ||
Sbjct: 429 aatttgcttattgatcgccgtaccaacgctctgaagcttgcagattttggtctggctaga 488
Query: 695 gcatttggaattcctgtccgtacatttactcatgaggtagtgacattatggtacagagct 754
|||||||| || ||||| | |||||||| |||||||| || || | ||||| |||||
Sbjct: 489 gcatttggtatacctgttaggacatttacacatgaggttgttaccctgtggtatagagcc 548
Query: 755 ccagaaattctgcttgga 772
|| |||||||||||||||
Sbjct: 549 cctgaaattctgcttgga 566
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 132 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 191
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 192 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 251
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 252 gagaagcgc 260
>gb|BU888190.1|BU888190 P004H03 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 646
Score = 123 bits (62), Expect = 2e-026
Identities = 164/198 (82%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 434 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 493
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttggtttagccagg 694
|| || | || ||||| || || || || |||||||||||||| |||||| | || ||
Sbjct: 494 aatttgcttattgatcgccgtaccaacgcgctgaagcttgcagattttggtctggctaga 553
Query: 695 gcatttggaattcctgtccgtacatttactcatgaggtagtgacattatggtacagagct 754
|||||||| || ||||| | |||||||| |||||||| || || | ||||| |||||
Sbjct: 554 gcatttggtatacctgttaggacatttacacatgaggttgttaccctgtggtatagagcc 613
Query: 755 ccagaaattctgcttgga 772
|| |||||||||||||||
Sbjct: 614 cctgaaattctgcttgga 631
Score = 40.1 bits (20), Expect = 0.22
Identities = 101/128 (78%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 197 aagaagatccgtttggagcaggaagacgagggcgttcccagcactgctatccgagaaatt 256
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 257 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 316
Query: 458 gagaagcg 465
||||||||
Sbjct: 317 gagaagcg 324
>gb|CK111884.1|CK111884 R024E12 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R024E12 5', mRNA sequence
Length = 671
Score = 115 bits (58), Expect = 5e-024
Identities = 163/198 (82%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 467 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 526
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttggtttagccagg 694
|| || | || ||||| || || || || |||||||||||||| |||||| | | ||
Sbjct: 527 aatttgcttattgatcgccgtaccaacgctctgaagcttgcagattttggtctgactaga 586
Query: 695 gcatttggaattcctgtccgtacatttactcatgaggtagtgacattatggtacagagct 754
|||||||| || ||||| | |||||||| |||||||| || || | ||||| |||||
Sbjct: 587 gcatttggtatacctgttaggacatttacacatgaggttgttaccctgtggtatagagcc 646
Query: 755 ccagaaattctgcttgga 772
|| |||||||||||||||
Sbjct: 647 cctgaaattctgcttgga 664
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 230 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 289
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 290 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 349
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 350 gagaagcgc 358
>gb|CN519868.1|CN519868 GQ0106.B3_P23 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0106_P23 5', mRNA sequence
Length = 688
Score = 113 bits (57), Expect = 2e-023
Identities = 300/381 (78%)
Strand = Plus / Plus
Query: 665 ctgaagcttgcagactttggtttagccagggcatttggaattcctgtccgtacatttact 724
|||||||||||||| ||||| | || || |||||||| || ||||| | ||||||||
Sbjct: 6 ctgaagcttgcagattttggactggctagagcatttggtatacctgttaggacatttaca 65
Query: 725 catgaggtagtgacattatggtacagagctccagaaattctgcttggagcgaggcagtat 784
|||||||| || || | ||||| ||||| || ||||||||||||||| | | || ||
Sbjct: 66 catgaggttgttaccctgtggtatagagcccctgaaattctgcttggatctcgccattac 125
Query: 785 tccacaccagttgatgtgtggtctgtgggctgtatctttgcggaaatggtgaaccaaaag 844
|| || ||||||||||||||||| ||||| ||||| ||||| || ||||||||||| |||
Sbjct: 126 tcgactccagttgatgtgtggtcagtgggatgtatatttgctgagatggtgaaccagaag 185
Query: 845 ccactattccctggcgattctgagatcgacgaactttttaagatattcaggatactaggt 904
||| | ||||| || ||||| ||||| || ||||| || || || ||||| || | |||
Sbjct: 186 ccattgttcccaggggattcggagattgatgaactattcaaaattttcagaatcttgggt 245
Query: 905 acaccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaagacagctttc 964
|| || |||||| | | ||||| ||||| | || |||||| |||||||||| || |||
Sbjct: 246 actccaaatgaggacacctggcctggagttacttctttgcccgacttcaagagtgcattc 305
Query: 965 cccaggtggcaagctcaggacctggcaacagtagtcccaaatcttgaccctgctgggttg 1024
|| | ||||| || |||| ||||||| ||||| |||| |||||| ||||| ||
Sbjct: 306 cctaagtggccttctaaggatttggcaactgtagttccaactcttgaaaaagctggtgtg 365
Query: 1025 gaccttctctctaaaatgctt 1045
|| ||||||||||||||||||
Sbjct: 366 gatcttctctctaaaatgctt 386
>gb|CV234910.1|CV234910 WS01216.B21_O05 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01216_O05 3', mRNA sequence
Length = 732
Score = 113 bits (57), Expect = 2e-023
Identities = 300/381 (78%)
Strand = Plus / Minus
Query: 665 ctgaagcttgcagactttggtttagccagggcatttggaattcctgtccgtacatttact 724
|||||||||||||| ||||| | || || |||||||| || ||||| | ||||||||
Sbjct: 700 ctgaagcttgcagattttggactggctagagcatttggtatacctgttaggacatttaca 641
Query: 725 catgaggtagtgacattatggtacagagctccagaaattctgcttggagcgaggcagtat 784
|||||||| || || | ||||| ||||| || ||||||||||||||| | | || ||
Sbjct: 640 catgaggttgttaccctgtggtatagagcccctgaaattctgcttggatctcgccattac 581
Query: 785 tccacaccagttgatgtgtggtctgtgggctgtatctttgcggaaatggtgaaccaaaag 844
|| || ||||||||||||||||| ||||| ||||| ||||| || ||||||||||| |||
Sbjct: 580 tcgactccagttgatgtgtggtcagtgggatgtatatttgctgagatggtgaaccagaag 521
Query: 845 ccactattccctggcgattctgagatcgacgaactttttaagatattcaggatactaggt 904
||| | ||||| || ||||| ||||| || ||||| || || || ||||| || | |||
Sbjct: 520 ccattgttcccaggggattcggagattgatgaactattcaaaattttcagaatcttgggt 461
Query: 905 acaccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaagacagctttc 964
|| || |||||| | | ||||| ||||| | || |||||| |||||||||| || |||
Sbjct: 460 actccaaatgaggacacctggcctggagttacttctttgcccgacttcaagagtgcattc 401
Query: 965 cccaggtggcaagctcaggacctggcaacagtagtcccaaatcttgaccctgctgggttg 1024
|| | ||||| || |||| ||||||| ||||| |||| |||||| ||||| ||
Sbjct: 400 cctaagtggccttctaaggatttggcaactgtagttccaactcttgaaaaagctggtgtg 341
Query: 1025 gaccttctctctaaaatgctt 1045
|| ||||||||||||||||||
Sbjct: 340 gatcttctctctaaaatgctt 320
>gb|CV247738.1|CV247738 WS01119.B21_C19 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01119_C19 3', mRNA sequence
Length = 611
Score = 113 bits (57), Expect = 2e-023
Identities = 300/381 (78%)
Strand = Plus / Minus
Query: 665 ctgaagcttgcagactttggtttagccagggcatttggaattcctgtccgtacatttact 724
|||||||||||||| ||||| | || || |||||||| || ||||| | ||||||||
Sbjct: 579 ctgaagcttgcagattttggactggctagagcatttggtatacctgttaggacatttaca 520
Query: 725 catgaggtagtgacattatggtacagagctccagaaattctgcttggagcgaggcagtat 784
|||||||| || || | ||||| ||||| || ||||||||||||||| | | || ||
Sbjct: 519 catgaggttgttaccctgtggtatagagcccctgaaattctgcttggatctcgccattac 460
Query: 785 tccacaccagttgatgtgtggtctgtgggctgtatctttgcggaaatggtgaaccaaaag 844
|| || ||||||||||||||||| ||||| ||||| ||||| || ||||||||||| |||
Sbjct: 459 tcgactccagttgatgtgtggtcagtgggatgtatatttgctgagatggtgaaccagaag 400
Query: 845 ccactattccctggcgattctgagatcgacgaactttttaagatattcaggatactaggt 904
||| | ||||| || ||||| ||||| || ||||| || || || ||||| || | |||
Sbjct: 399 ccattgttcccaggggattcggagattgatgaactattcaaaattttcagaatcttgggt 340
Query: 905 acaccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaagacagctttc 964
|| || |||||| | | ||||| ||||| | || |||||| |||||||||| || |||
Sbjct: 339 actccaaatgaggacacctggcctggagttacttctttgcccgacttcaagagtgcattc 280
Query: 965 cccaggtggcaagctcaggacctggcaacagtagtcccaaatcttgaccctgctgggttg 1024
|| | ||||| || |||| ||||||| ||||| |||| |||||| ||||| ||
Sbjct: 279 cctaagtggccttctaaggatttggcaactgtagttccaactcttgaaaaagctggtgtg 220
Query: 1025 gaccttctctctaaaatgctt 1045
|| ||||||||||||||||||
Sbjct: 219 gatcttctctctaaaatgctt 199
>gb|CV250821.1|CV250821 WS0114.B21_O04 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0114_O04
3', mRNA sequence
Length = 720
Score = 113 bits (57), Expect = 2e-023
Identities = 300/381 (78%)
Strand = Plus / Minus
Query: 665 ctgaagcttgcagactttggtttagccagggcatttggaattcctgtccgtacatttact 724
|||||||||||||| ||||| | || || |||||||| || ||||| | ||||||||
Sbjct: 713 ctgaagcttgcagattttggactggctagagcatttggtatacctgttaggacatttaca 654
Query: 725 catgaggtagtgacattatggtacagagctccagaaattctgcttggagcgaggcagtat 784
|||||||| || || | ||||| ||||| || ||||||||||||||| | | || ||
Sbjct: 653 catgaggttgttaccctgtggtatagagcccctgaaattctgcttggatctcgccattac 594
Query: 785 tccacaccagttgatgtgtggtctgtgggctgtatctttgcggaaatggtgaaccaaaag 844
|| || ||||||||||||||||| ||||| ||||| ||||| || ||||||||||| |||
Sbjct: 593 tcgactccagttgatgtgtggtcagtgggatgtatatttgctgagatggtgaaccagaag 534
Query: 845 ccactattccctggcgattctgagatcgacgaactttttaagatattcaggatactaggt 904
||| | ||||| || ||||| ||||| || ||||| || || || ||||| || | |||
Sbjct: 533 ccattgttcccaggggattcggagattgatgaactattcaaaattttcagaatcttgggt 474
Query: 905 acaccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaagacagctttc 964
|| || |||||| | | ||||| ||||| | || |||||| |||||||||| || |||
Sbjct: 473 actccaaatgaggacacctggcctggagttacttctttgcccgacttcaagagtgcattc 414
Query: 965 cccaggtggcaagctcaggacctggcaacagtagtcccaaatcttgaccctgctgggttg 1024
|| | ||||| || |||| ||||||| ||||| |||| |||||| ||||| ||
Sbjct: 413 cctaagtggccttctaaggatttggcaactgtagttccaactcttgaaaaagctggtgtg 354
Query: 1025 gaccttctctctaaaatgctt 1045
|| ||||||||||||||||||
Sbjct: 353 gatcttctctctaaaatgctt 333
>gb|DT498274.1|DT498274 WS0114.BR_O04 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0114_O04
5', mRNA sequence
Length = 613
Score = 113 bits (57), Expect = 2e-023
Identities = 300/381 (78%)
Strand = Plus / Plus
Query: 665 ctgaagcttgcagactttggtttagccagggcatttggaattcctgtccgtacatttact 724
|||||||||||||| ||||| | || || |||||||| || ||||| | ||||||||
Sbjct: 12 ctgaagcttgcagattttggactggctagagcatttggtatacctgttaggacatttaca 71
Query: 725 catgaggtagtgacattatggtacagagctccagaaattctgcttggagcgaggcagtat 784
|||||||| || || | ||||| ||||| || ||||||||||||||| | | || ||
Sbjct: 72 catgaggttgttaccctgtggtatagagcccctgaaattctgcttggatctcgccattac 131
Query: 785 tccacaccagttgatgtgtggtctgtgggctgtatctttgcggaaatggtgaaccaaaag 844
|| || ||||||||||||||||| ||||| ||||| ||||| || ||||||||||| |||
Sbjct: 132 tcgactccagttgatgtgtggtcagtgggatgtatatttgctgagatggtgaaccagaag 191
Query: 845 ccactattccctggcgattctgagatcgacgaactttttaagatattcaggatactaggt 904
||| | ||||| || ||||| ||||| || ||||| || || || ||||| || | |||
Sbjct: 192 ccattgttcccaggggattcggagattgatgaactattcaaaattttcagaatcttgggt 251
Query: 905 acaccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaagacagctttc 964
|| || |||||| | | ||||| ||||| | || |||||| |||||||||| || |||
Sbjct: 252 actccaaatgaggacacctggcctggagttacttctttgcccgacttcaagagtgcattc 311
Query: 965 cccaggtggcaagctcaggacctggcaacagtagtcccaaatcttgaccctgctgggttg 1024
|| | ||||| || |||| ||||||| ||||| |||| |||||| ||||| ||
Sbjct: 312 cctaagtggccttctaaggatttggcaactgtagttccaactcttgaaaaagctggtgtg 371
Query: 1025 gaccttctctctaaaatgctt 1045
|| ||||||||||||||||||
Sbjct: 372 gatcttctctctaaaatgctt 392
>gb|BU894562.1|BU894562 X011C11 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 672
Score = 103 bits (52), Expect = 2e-020
Identities = 292/372 (78%)
Strand = Plus / Plus
Query: 674 gcagactttggtttagccagggcatttggaattcctgtccgtacatttactcatgaggta 733
||||| |||||| | || || |||||||| || ||||| | |||||||| ||||||||
Sbjct: 2 gcagattttggtctggctagagcatttggtatacctgttaggacatttacacatgaggtt 61
Query: 734 gtgacattatggtacagagctccagaaattctgcttggagcgaggcagtattccacacca 793
|| || | ||||| ||||| || ||||||||||||||| | | || || || || |||
Sbjct: 62 gttaccctgtggtatagagcccctgaaattctgcttggatctcgccattactcaactcca 121
Query: 794 gttgatgtgtggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccactattc 853
|||||||||||||| ||||| ||||| ||||| || ||||||||||| |||||| |||||
Sbjct: 122 gttgatgtgtggtcggtgggatgtatatttgctgagatggtgaaccagaagccattattc 181
Query: 854 cctggcgattctgagatcgacgaactttttaagatattcaggatactaggtacaccgaat 913
|| || ||||| ||||| || ||||| || || || ||||| || | ||||| || |||
Sbjct: 182 ccaggggattccgagattgatgaactattcaaaattttcagaatcttgggtactccaaat 241
Query: 914 gagcagagttggccaggagtcagttgtttgcctgacttcaagacagctttccccaggtgg 973
||| | | ||||| ||||| | || |||||| |||||||||| || ||||| | ||||
Sbjct: 242 gaggacacgtggcctggagttacttctttgcccgacttcaagagtgcattccctaagtgg 301
Query: 974 caagctcaggacctggcaacagtagtcccaaatcttgaccctgctgggttggaccttctc 1033
| || |||| ||||||| ||||| |||| ||||| ||||| |||| ||||||
Sbjct: 302 ccttctaaggatttggcaactgtagttccaacccttgaaaaagctggtgtggatcttctc 361
Query: 1034 tctaaaatgctt 1045
||||||||||||
Sbjct: 362 tctaaaatgctt 373
>gb|CV248105.1|CV248105 WS0112.B21_H06 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0112_H06
3', mRNA sequence
Length = 703
Score = 101 bits (51), Expect = 7e-020
Identities = 276/351 (78%)
Strand = Plus / Minus
Query: 695 gcatttggaattcctgtccgtacatttactcatgaggtagtgacattatggtacagagct 754
|||||||| || ||||| | |||||||| |||||||| || || | ||||| |||||
Sbjct: 682 gcatttggtatacctgttaggacatttacacatgaggttgttaccctgtggtatagagcc 623
Query: 755 ccagaaattctgcttggagcgaggcagtattccacaccagttgatgtgtggtctgtgggc 814
|| ||||||||||||||| | | || || || || ||||||||||||||||| |||||
Sbjct: 622 cctgaaattctgcttggatctcgccattactcgactccagttgatgtgtggtcagtggga 563
Query: 815 tgtatctttgcggaaatggtgaaccaaaagccactattccctggcgattctgagatcgac 874
||||| ||||| || ||||||||||| |||||| | ||||| || ||||| ||||| ||
Sbjct: 562 tgtatatttgctgagatggtgaaccagaagccattgttcccaggggattcggagattgat 503
Query: 875 gaactttttaagatattcaggatactaggtacaccgaatgagcagagttggccaggagtc 934
||||| || || || ||||| || | ||||| || |||||| | | ||||| |||||
Sbjct: 502 gaactattcaaaattttcagaatcttgggtactccaaatgaggacacctggcctggagtt 443
Query: 935 agttgtttgcctgacttcaagacagctttccccaggtggcaagctcaggacctggcaaca 994
| || |||||| |||||||||| || ||||| | ||||| || |||| |||||||
Sbjct: 442 acttctttgcccgacttcaagagtgcattccctaagtggccttctaaggatttggcaact 383
Query: 995 gtagtcccaaatcttgaccctgctgggttggaccttctctctaaaatgctt 1045
||||| |||| |||||| ||||| |||| ||||||||||||||||||
Sbjct: 382 gtagttccaactcttgaaaaagctggtgtggatcttctctctaaaatgctt 332
>gb|CX170119.1|CX170119 E07_69-54_09.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 700
Score = 99.6 bits (50), Expect = 3e-019
Identities = 131/158 (82%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 501 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 560
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttggtttagccagg 694
|| || | || ||||| || || || || |||||||||||||| ||||| | || ||
Sbjct: 561 aatttgcttattgatcgccgtaccaacgcgctgaagcttgcagattttggactggctaga 620
Query: 695 gcatttggaattcctgtccgtacatttactcatgaggt 732
|||||||| || ||||| | |||||||| ||||||||
Sbjct: 621 gcatttggtatacctgttaggacatttacacatgaggt 658
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 264 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 323
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 324 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 383
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 384 gagaagcgc 392
>gb|DT494692.1|DT494692 WS01119.BR_C19 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01119_C19 5', mRNA sequence
Length = 755
Score = 99.6 bits (50), Expect = 3e-019
Identities = 131/158 (82%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 538 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 597
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttggtttagccagg 694
|| || | || ||||| || || || || |||||||||||||| ||||| | || ||
Sbjct: 598 aatttgcttattgatcgccgtaccaacgcgctgaagcttgcagattttggactggctaga 657
Query: 695 gcatttggaattcctgtccgtacatttactcatgaggt 732
|||||||| || ||||| | |||||||| ||||||||
Sbjct: 658 gcatttggtatacctgttaggacatttacacatgaggt 695
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 301 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 360
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 361 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 420
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 421 gagaagcgc 429
>gb|BU813799.1|BU813799 N015B11 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 646
Score = 97.6 bits (49), Expect = 1e-018
Identities = 115/137 (83%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 497 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 556
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttggtttagccagg 694
|| || | || ||||| || || || || |||||||||||||| |||||| | || ||
Sbjct: 557 aatttgcttattgatcgccgtaccaacgcgctgaagcttgcagattttggtctggctaga 616
Query: 695 gcatttggaattcctgt 711
|||||||| || |||||
Sbjct: 617 gcatttggtatacctgt 633
>gb|CV253345.1|CV253345 WS0221.B21_K06 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0221_K06 3', mRNA sequence
Length = 749
Score = 95.6 bits (48), Expect = 4e-018
Identities = 231/292 (79%)
Strand = Plus / Minus
Query: 665 ctgaagcttgcagactttggtttagccagggcatttggaattcctgtccgtacatttact 724
|||||||||||||| ||||| | || || |||||||| || ||||| | ||||||||
Sbjct: 738 ctgaagcttgcagattttggactggctagagcatttggtatacctgttaggacatttaca 679
Query: 725 catgaggtagtgacattatggtacagagctccagaaattctgcttggagcgaggcagtat 784
|||||||| || || | ||||| ||||| || |||||| |||||||| | | || ||
Sbjct: 678 catgaggttgttaccctgtggtatagagcccctgaaattttgcttggatctcgccattac 619
Query: 785 tccacaccagttgatgtgtggtctgtgggctgtatctttgcggaaatggtgaaccaaaag 844
|| || ||||||||||||||||| ||||| ||||| ||||| || ||||||||||| |||
Sbjct: 618 tcgactccagttgatgtgtggtcagtgggatgtatatttgctgagatggtgaaccagaag 559
Query: 845 ccactattccctggcgattctgagatcgacgaactttttaagatattcaggatactaggt 904
||| | ||||| || ||||| ||||| || ||||| || || || ||||| || | |||
Sbjct: 558 ccattgttcccaggggattcggagattgatgaactattcaaaattttcagaatcttgggt 499
Query: 905 acaccgaatgagcagagttggccaggagtcagttgtttgcctgacttcaaga 956
|| || |||||| | | ||||| ||||| | || |||||| ||||||||||
Sbjct: 498 actccaaatgaggacacctggcctggagttacttctttgcccgacttcaaga 447
>gb|BU884896.1|BU884896 R017D10 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 642
Score = 93.7 bits (47), Expect = 2e-017
Identities = 95/111 (85%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 493 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 552
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttggt 685
|| || | || ||||| || || || || |||||||||||||| ||||||
Sbjct: 553 aatttgcttattgatcgccgtaccaacgcgctgaagcttgcagattttggt 603
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 256 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 315
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 316 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 375
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 376 gagaagcgc 384
>gb|BU888794.1|BU888794 P012F01 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 635
Score = 93.7 bits (47), Expect = 2e-017
Identities = 95/111 (85%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 484 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 543
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttggt 685
|| || | || ||||| || || || || |||||||||||||| ||||||
Sbjct: 544 aatttgcttattgatcgccgtaccaacgcgctgaagcttgcagattttggt 594
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 247 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 306
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 307 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 366
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 367 gagaagcgc 375
>gb|BU876836.1|BU876836 V025H09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 597
Score = 91.7 bits (46), Expect = 7e-017
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 466 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 525
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttgg 684
|| || | || ||||| || || || || |||||||||||||| |||||
Sbjct: 526 aatttgcttattgatcgccgtaccaacgcgctgaagcttgcagattttgg 575
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 229 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 288
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 289 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 348
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 349 gagaagcgc 357
>gb|BU879286.1|BU879286 V058C10 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 595
Score = 91.7 bits (46), Expect = 7e-017
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 466 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 525
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttgg 684
|| || | || ||||| || || || || |||||||||||||| |||||
Sbjct: 526 aatttgcttattgatcgccgtaccaacgcgctgaagcttgcagattttgg 575
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 229 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 288
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 289 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 348
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 349 gagaagcgc 357
>gb|BU879563.1|BU879563 V061G08 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 607
Score = 91.7 bits (46), Expect = 7e-017
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 466 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 525
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttgg 684
|| || | || ||||| || || || || |||||||||||||| |||||
Sbjct: 526 aatttgcttattgatcgccgtaccaacgcgctgaagcttgcagattttgg 575
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 229 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 288
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 289 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 348
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 349 gagaagcgc 357
>gb|AJ775897.1|AJ775897 AJ775897 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400006H02F1, mRNA sequence
Length = 581
Score = 91.7 bits (46), Expect = 7e-017
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 447 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 506
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttgg 684
|| || | || ||||| || || || || |||||||||||||| |||||
Sbjct: 507 aatttgcttattgatcgccgtaccaacgcgctgaagcttgcagattttgg 556
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 210 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 269
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 270 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 329
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 330 gagaagcgc 338
>gb|CX182339.1|CX182339 B11_45-96_03.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 657
Score = 91.7 bits (46), Expect = 7e-017
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 510 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 569
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttgg 684
|| || | || ||||| || || || || |||||||||||||| |||||
Sbjct: 570 aatttgcttattgatcgccgtaccaacgcgctgaagcttgcagattttgg 619
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 273 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 332
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 333 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 392
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 393 gagaagcgc 401
>gb|CX187188.1|CX187188 F05_45-47_11.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 634
Score = 91.7 bits (46), Expect = 7e-017
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 502 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 561
Query: 635 aacttattgatagatcggcgcactaatgcactgaagcttgcagactttgg 684
|| || | || ||||| || || || || |||||||||||||| |||||
Sbjct: 562 aatttgcttattgatcgccgtaccaacgcgctgaagcttgcagattttgg 611
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 265 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 324
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 325 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 384
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 385 gagaagcgc 393
>gb|BU862326.1|BU862326 S014C04 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 421
Score = 89.7 bits (45), Expect = 3e-016
Identities = 150/185 (81%)
Strand = Plus / Plus
Query: 695 gcatttggaattcctgtccgtacatttactcatgaggtagtgacattatggtacagagct 754
|||||||| || ||||| | |||||||| |||||||| || || | ||||| |||||
Sbjct: 7 gcatttggtatacctgttaggacatttacacatgaggttgttaccctgtggtatagagcc 66
Query: 755 ccagaaattctgcttggagcgaggcagtattccacaccagttgatgtgtggtctgtgggc 814
|| ||||||||||||||| | | || || || || | ||||||||||||||| |||||
Sbjct: 67 cctgaaattctgcttggatctcgccattactcaactcgagttgatgtgtggtcggtggga 126
Query: 815 tgtatctttgcggaaatggtgaaccaaaagccactattccctggcgattctgagatcgac 874
||||| ||||| || ||||||||||| |||||| ||||||| || ||||| ||||| ||
Sbjct: 127 tgtatatttgctgagatggtgaaccagaagccattattcccaggggattccgagattgat 186
Query: 875 gaact 879
|||||
Sbjct: 187 gaact 191
>gb|CV247539.1|CV247539 WS01118.B21_I05 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01118_I05 3', mRNA sequence
Length = 719
Score = 85.7 bits (43), Expect = 4e-015
Identities = 202/255 (79%)
Strand = Plus / Minus
Query: 791 ccagttgatgtgtggtctgtgggctgtatctttgcggaaatggtgaaccaaaagccacta 850
||||||||||||||||| ||||| ||||| ||||| || ||||||||||| |||||| |
Sbjct: 699 ccagttgatgtgtggtcagtgggatgtatatttgctgagatggtgaaccagaagccattg 640
Query: 851 ttccctggcgattctgagatcgacgaactttttaagatattcaggatactaggtacaccg 910
||||| || ||||| ||||| || ||||| || || || ||||| || | ||||| ||
Sbjct: 639 ttcccaggggattcggagattgatgaactattcaaaattttcagaatcttgggtactcca 580
Query: 911 aatgagcagagttggccaggagtcagttgtttgcctgacttcaagacagctttccccagg 970
|||||| | | ||||| ||||| | || |||||| |||||||||| || ||||| | |
Sbjct: 579 aatgaggacacctggcctggagttacttctttgcccgacttcaagagtgcattccctaag 520
Query: 971 tggcaagctcaggacctggcaacagtagtcccaaatcttgaccctgctgggttggacctt 1030
|||| || |||| ||||||| ||||| |||| |||||| ||||| |||| |||
Sbjct: 519 tggccttctaaggatttggcaactgtagttccaactcttgaaaaagctggtgtggatctt 460
Query: 1031 ctctctaaaatgctt 1045
|||||||||||||||
Sbjct: 459 ctctctaaaatgctt 445
>gb|BU889857.1|BU889857 P026E12 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 454
Score = 83.8 bits (42), Expect = 2e-014
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 369 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 428
Query: 635 aa 636
||
Sbjct: 429 aa 430
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 132 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 191
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 192 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 251
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 252 gagaagcgc 260
>gb|CX183758.1|CX183758 D03_45-83_07.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 603
Score = 83.8 bits (42), Expect = 2e-014
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 511 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 570
Query: 635 aa 636
||
Sbjct: 571 aa 572
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 274 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 333
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 334 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 393
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 394 gagaagcgc 402
>gb|DT495121.1|DT495121 WS0112.BR_H06 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0112_H06
5', mRNA sequence
Length = 618
Score = 83.8 bits (42), Expect = 2e-014
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgagatttgaaacctcag 634
|||||||| |||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 518 ctccgtggcattgcttactgccattctcatagagttctgcatcgagatttgaaacctcag 577
Query: 635 aa 636
||
Sbjct: 578 aa 579
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 281 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 340
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 341 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 400
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 401 gagaagcgc 409
>gb|CV272767.1|CV272767 WS0158.B21_K06 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0158_K06 3', mRNA sequence
Length = 456
Score = 56.0 bits (28), Expect = 4e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 593 tgccattctcatagagttcttcaccgagatttgaaacctcagaa 636
||||||| |||||||||||| || |||||| |||||||||||||
Sbjct: 368 tgccattatcatagagttctgcatcgagatatgaaacctcagaa 325
>gb|DT469449.1|DT469449 WS01917.C21_N02 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01917_N02 3', mRNA sequence
Length = 551
Score = 56.0 bits (28), Expect = 4e-006
Identities = 169/216 (78%)
Strand = Plus / Minus
Query: 830 atggtgaaccaaaagccactattccctggcgattctgagatcgacgaactttttaagata 889
||||||||||| |||||| | ||||| || ||||| ||||| || ||||| || || ||
Sbjct: 545 atggtgaaccagaagccattgttcccaggggattcggagattgatgaactattcaaaatt 486
Query: 890 ttcaggatactaggtacaccgaatgagcagagttggccaggagtcagttgtttgcctgac 949
||||| || | ||||| || |||||| | | ||||| ||||| | || |||||| |||
Sbjct: 485 ttcagaatcttgggtactccaaatgaggacacctggcctggagttacttctttgcccgac 426
Query: 950 ttcaagacagctttccccaggtggcaagctcaggacctggcaacagtagtcccaaatctt 1009
||||||| || ||||||| ||||| || |||| ||||||| ||||| |||| ||||
Sbjct: 425 ttcaagagtgcattccccaagtggccttctaaggatttggcaactgtagttccaactctt 366
Query: 1010 gaccctgctgggttggaccttctctctaaaatgctt 1045
|| ||||| |||| ||||||||||||||||||
Sbjct: 365 gaaaaagctggtgtggatcttctctctaaaatgctt 330
>gb|BU813388.1|BU813388 N009H03 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 500
Score = 54.0 bits (27), Expect = 1e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 575 ctccgtggtgttgcgtactgccattctcatagagttcttcaccgaga 621
|||||||| |||| ||||||||||||||||||||||| || |||||
Sbjct: 454 ctccgtggcattgcttactgccattctcatagagttctgcatcgaga 500
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 217 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 276
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 277 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 336
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 337 gagaagcgc 345
>gb|BI127708.1|BI127708 G064P65Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 452
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 234 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 293
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 294 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 353
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 354 gagaagcgc 362
>gb|BU826080.1|BU826080 UK116TD07 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 451
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 262 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 321
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 322 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 381
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 382 gagaagcgc 390
>gb|BU826475.1|BU826475 UK121TB05 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 431
Score = 42.1 bits (21), Expect = 0.055
Identities = 48/57 (84%)
Strand = Plus / Plus
Query: 316 caccaacgagacgatcgcgctcaagaagatccgcctcgagcaggaggacgagggcgt 372
|||||| ||||| || || || ||||||||||| | |||||||| |||||||||||
Sbjct: 257 caccaatgagaccattgctctgaagaagatccgtttggagcaggaagacgagggcgt 313
>gb|BU878975.1|BU878975 V054B08 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 488
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 229 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 288
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 289 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 348
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 349 gagaagcgc 357
>gb|BU890314.1|BU890314 P034H06 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 471
Score = 42.1 bits (21), Expect = 0.055
Identities = 102/129 (79%)
Strand = Plus / Plus
Query: 338 aagaagatccgcctcgagcaggaggacgagggcgtcccgtccaccgccatccgcgagatc 397
||||||||||| | |||||||| ||||||||||| || ||| || ||||| || ||
Sbjct: 280 aagaagatccgtttggagcaggaagacgagggcgtacccagcactgctatccgagaaatt 339
Query: 398 tctctcctcaaggagatgaaccacggcaacatcgtcagattacatgatgttgtccacagc 457
|||||| | || |||||| | || || ||||| |||||| | || ||||| || |||||
Sbjct: 340 tctctcttgaaagagatgcagcatggtaacattgtcagactgcaggatgtggtgcacagt 399
Query: 458 gagaagcgc 466
|||||||||
Sbjct: 400 gagaagcgc 408
>gb|CX185687.1|CX185687 A01_45-58_01.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 663
Score = 40.1 bits (20), Expect = 0.22
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 794 gttgatgtgtggtctgtgggctgtatctttgc 825
|||||| |||||||||| || |||||||||||
Sbjct: 393 gttgatatgtggtctgttggttgtatctttgc 424
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 130,858
Number of Sequences: 369679
Number of extensions: 130858
Number of successful extensions: 35803
Number of sequences better than 0.5: 50
Number of HSP's better than 0.5 without gapping: 45
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 35645
Number of HSP's gapped (non-prelim): 101
length of query: 1354
length of database: 203,408,664
effective HSP length: 19
effective length of query: 1335
effective length of database: 196,384,763
effective search space: 262173658605
effective search space used: 262173658605
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)