BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2405010.2.1
(1644 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN520434.1|CN520434 GQ0107.B3_E20 GQ010 Populus trichoca... 131 9e-029
gb|CX655297.1|CX655297 PO02032H02 Poplar SC cDNA library Po... 131 9e-029
gb|AI166408.1|AI166408 xylem.est.243 Poplar xylem Lambda ZA... 119 4e-025
gb|CF230545.1|CF230545 PtaC0009F5F0511 Poplar cDNA library ... 117 1e-024
gb|CN520679.1|CN520679 GQ0108.B3_J24 GQ010 Populus trichoca... 111 9e-023
gb|CX660168.1|CX660168 PO01018G10 Poplar SC cDNA library Po... 111 9e-023
gb|DT516163.1|DT516163 WS02430.B21_J10 PTxD-ICC-N-A-14 Popu... 100 3e-019
gb|BI129514.1|BI129514 G091P73Y Populus cambium cDNA librar... 94 2e-017
gb|CN550185.1|CN550185 GQ0242.B3_D12 GQ024 Populus trichoca... 94 2e-017
gb|DV465584.1|DV465584 MTUNUL1.P40.E06 NUL Populus fremonti... 94 2e-017
gb|CN524322.1|CN524322 GQ015M17.T3_E07 GQ015 Populus tricho... 92 8e-017
gb|CV252480.1|CV252480 PX0011.B21_P17 PT-X-FL-A-1 Populus t... 92 8e-017
gb|CV281876.1|CV281876 WS0183.B21_B16 PTxD-IL-N-A-9 Populus... 92 8e-017
gb|DT488835.1|DT488835 WS02537.B21_J02 PT-MB-N-A-15 Populus... 92 8e-017
gb|DT515994.1|DT515994 WS02430.B21_B15 PTxD-ICC-N-A-14 Popu... 92 8e-017
gb|DT519285.1|DT519285 WS02440.B21_P17 PTxD-ICC-N-A-14 Popu... 92 8e-017
gb|DT520763.1|DT520763 WS02448.B21_H13 PTxD-ICC-N-A-14 Popu... 92 8e-017
gb|CN549636.1|CN549636 GQ0241.B3_O18 GQ024 Populus trichoca... 90 3e-016
gb|DT476504.1|DT476504 WS01229.B21_M22 PT-GT-FL-A-3 Populus... 88 1e-015
gb|CA933994.1|CA933994 MTU3TS.P1.D12 Aspen stem cDNA Librar... 86 5e-015
gb|CK092684.1|CK092684 G091P73.3pR Populus tension wood cDN... 84 2e-014
gb|AJ777755.1|AJ777755 AJ777755 Populus euphratica root 3-6... 84 2e-014
gb|CV233888.1|CV233888 WS01212.B21_M15 PT-GT-FL-A-3 Populus... 82 8e-014
gb|CN519681.1|CN519681 GQ0101.B3_G24 GQ010 Populus trichoca... 78 1e-012
gb|DT519527.1|DT519527 WS02441.B21_O02 PTxD-ICC-N-A-14 Popu... 78 1e-012
gb|DT524093.1|DT524093 WS02041.C21.1_I11 PTxN-IB-N-A-11 Pop... 76 5e-012
gb|AI166641.1|AI166641 xylem.est.453 Poplar xylem Lambda ZA... 74 2e-011
gb|CV131949.1|CV131949 L4P04d03 Populus stem seasonal libra... 74 2e-011
gb|CV228004.1|CV228004 WS0168.B21_N06 PT-DX-A-7 Populus tri... 74 2e-011
gb|CV229490.1|CV229490 WS01913.B21_H17 PT-DX-N-A-10 Populus... 74 2e-011
gb|CV244899.1|CV244899 WS0255.B21_O21 PT-MB-N-A-15 Populus ... 74 2e-011
gb|CV273422.1|CV273422 WS01710.B21_O22 PTxD-NR-A-8 Populus ... 74 2e-011
gb|CA934118.1|CA934118 MTU3TS.P3.B06 Aspen stem cDNA Librar... 72 7e-011
gb|CV234474.1|CV234474 WS01215.B21.1_B02 PT-GT-FL-A-3 Popul... 72 7e-011
gb|CV237637.1|CV237637 WS0123.B21_I22 PT-GT-FL-A-3 Populus ... 72 7e-011
gb|CV253142.1|CV253142 WS0221.B21_A01 PTxD-ICC-A-12 Populus... 72 7e-011
gb|CV266691.1|CV266691 WS0203.B21_L12 PTxN-IB-N-A-11 Populu... 72 7e-011
gb|BP936939.1|BP936939 BP936939 full-length enriched poplar... 72 7e-011
gb|DT525425.1|DT525425 WS02045.C21_F01 PTxN-IB-N-A-11 Popul... 70 3e-010
gb|CX177291.1|CX177291 E05_69-77_09.ab1 leaf inoculated wit... 66 5e-009
gb|DT473494.1|DT473494 WS01229.BR_M22 PT-GT-FL-A-3 Populus ... 66 5e-009
gb|CK092655.1|CK092655 G090P60.3pR Populus tension wood cDN... 64 2e-008
gb|CV226678.1|CV226678 WS0164.B21_P11 PT-DX-A-7 Populus tri... 62 7e-008
gb|CV230306.1|CV230306 WS01916.B21_B09 PT-DX-N-A-10 Populus... 62 7e-008
gb|CV255749.1|CV255749 WS02414.B21_P04 PTxD-ICC-N-A-14 Popu... 62 7e-008
gb|CV264943.1|CV264943 WS02025.B21_O15 PTxN-IB-N-A-11 Popul... 62 7e-008
gb|CX171047.1|CX171047 F10_69-24_12.ab1 leaf inoculated wit... 62 7e-008
gb|BP934865.1|BP934865 BP934865 full-length enriched poplar... 60 3e-007
gb|BP935681.1|BP935681 BP935681 full-length enriched poplar... 60 3e-007
gb|DT469785.1|DT469785 WS01918.C21_O04 PT-DX-N-A-10 Populus... 60 3e-007
gb|DT484739.1|DT484739 WS02526.B21_E13 PT-MB-N-A-15 Populus... 56 4e-006
gb|CV277275.1|CV277275 WS0143.B21_C07 PTxD-IL-A-5 Populus t... 54 2e-005
gb|AJ777672.1|AJ777672 AJ777672 Populus euphratica root 3-6... 52 7e-005
gb|AJ777027.1|AJ777027 AJ777027 Populus euphratica root 3-6... 50 3e-004
gb|BU835991.1|BU835991 T081C05 Populus apical shoot cDNA li... 48 0.001
gb|CK102791.1|CK102791 G091P73.5pR Populus tension wood cDN... 48 0.001
gb|CV227824.1|CV227824 WS0168.B21_F03 PT-DX-A-7 Populus tri... 48 0.001
gb|BP931029.1|BP931029 BP931029 full-length enriched poplar... 48 0.001
gb|BP932446.1|BP932446 BP932446 full-length enriched poplar... 48 0.001
gb|BU821102.1|BU821102 UB19CPB03 Populus tremula cambium cD... 46 0.004
gb|BU825598.1|BU825598 UK110TG05 Populus apical shoot cDNA ... 46 0.004
gb|BU826086.1|BU826086 UK116TE01 Populus apical shoot cDNA ... 46 0.004
gb|BU826373.1|BU826373 UK119TH05 Populus apical shoot cDNA ... 46 0.004
gb|BU826982.1|BU826982 UK127TA12 Populus apical shoot cDNA ... 46 0.004
gb|CV131222.1|CV131222 L1P09f12 Populus stem seasonal libra... 46 0.004
gb|BP924760.1|BP924760 BP924760 full-length enriched poplar... 46 0.004
gb|DT471180.1|DT471180 WS01212.BR_M15 PT-GT-FL-A-3 Populus ... 46 0.004
gb|DV464133.1|DV464133 MTUNUL1.P23.E08 NUL Populus fremonti... 46 0.004
gb|BI131925.1|BI131925 G127P77Y Populus cambium cDNA librar... 42 0.067
gb|CN549886.1|CN549886 GQ0243.B3_L08 GQ024 Populus trichoca... 42 0.067
gb|CX173183.1|CX173183 B01_re-69-17_03.ab1 leaf inoculated ... 42 0.067
gb|BP923285.1|BP923285 BP923285 full-length enriched poplar... 42 0.067
gb|BP929505.1|BP929505 BP929505 full-length enriched poplar... 42 0.067
gb|DT473727.1|DT473727 WS0123.BR_I22 PT-GT-FL-A-3 Populus t... 42 0.067
gb|DT500290.1|DT500290 PX0011.BR_P17 PT-X-FL-A-1 Populus tr... 42 0.067
>gb|CN520434.1|CN520434 GQ0107.B3_E20 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0107_E20 5', mRNA sequence
Length = 816
Score = 131 bits (66), Expect = 9e-029
Identities = 333/422 (78%)
Strand = Plus / Minus
Query: 552 acatttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttc 611
||||||||||||||| |||||||||||| || | || ||| || || |||||||||||
Sbjct: 425 acatttgcgtagaccgctgtcatcatttcagcaagctgcctcacagtgacttcattgtta 366
Query: 612 ggattcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcact 671
|| || ||||| || || || || |||||||| | | ||||||||||||||||| |
Sbjct: 365 gggttgccaacgttaaaaatatgaccattggccctggaaggattttcaatcatcaagaga 306
Query: 672 acagcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaaca 731
||||| ||||| |||||||| || || ||||| |||||||| || | || ||||| |||
Sbjct: 305 acagcctcgatggcatccttaatataaacaaatgttctctgggattcgccaccatccaca 246
Query: 732 agcttcaagggctctctccggagcagattgttactgaagcaagccaaaacccgaggcaca 791
||||| | ||||| | || || ||| || || |||||||| | |||||| || ||
Sbjct: 245 agcttgagcggctcccggcgaagaagagcattgctaaagcaagcaagaacccggggaacg 186
Query: 792 ccctcgctaggaccatcgacaccaggaatgaaatccatccttggcccaatccaattaaaa 851
||||| || || ||||| ||||| ||||| |||||||| || || |||||||| || |||
Sbjct: 185 ccctcacttgggccatcaacaccgggaataaaatccattctgggtccaatccagttgaaa 126
Query: 852 ggtctcacgattgtgaattcaaggccattttctgcaccttcagcaaatacaagcctctca 911
|| |||||||| ||||| ||||| ||||| || ||||| |||||| | || |||||||||
Sbjct: 125 ggcctcacgatggtgaactcaagtccattctcagcaccctcagcataaaccagcctctca 66
Query: 912 ataagttgcttcgcgcaagcataggaccatctttgtttcacgattggaccaaaaatacag 971
|| | |||||| || || ||||| |||||||| || ||| | || | ||||||||| |||
Sbjct: 65 atcaattgctttgcacacgcataagaccatctctgcttctcaatggaaccaaaaatgcag 6
Query: 972 gg 973
||
Sbjct: 5 gg 4
Score = 60.0 bits (30), Expect = 3e-007
Identities = 78/94 (82%)
Strand = Plus / Minus
Query: 408 agaggcgtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctc 467
|||| |||||| ||||||||||| || || | |||||||| |||||||| || || |||
Sbjct: 569 agagacgtcttggggttccaaccaagttgtctattgattatggtcatgtctggaattctc 510
Query: 468 ttgtcgctatcatcgtatccttcgccgtagaact 501
||||| ||||| || ||||| || ||||||||||
Sbjct: 509 ttgtcactatcgtcatatccctcaccgtagaact 476
>gb|CX655297.1|CX655297 PO02032H02 Poplar SC cDNA library Populus alba x Populus tremula var.
glandulosa cDNA clone PO02032H02 5', mRNA sequence
Length = 667
Score = 131 bits (66), Expect = 9e-029
Identities = 288/362 (79%)
Strand = Plus / Minus
Query: 650 aggattttcaatcatcagcactacagcttcgatagcatccttgatgtagacaaaggttct 709
||||||||||||||||| | ||||| ||||| |||||||| || || ||||| |||||
Sbjct: 598 aggattttcaatcatcaagagaacagcctcgatggcatccttaatataaacaaatgttct 539
Query: 710 ctgagactgacccccatcaacaagcttcaagggctctctccggagcagattgttactgaa 769
||| || | || ||||| |||||||| | ||||| | || || ||| || || ||
Sbjct: 538 ctgggattcgccaccatccacaagcttgagcggctcccggcgaagaagagcattgctaaa 479
Query: 770 gcaagccaaaacccgaggcacaccctcgctaggaccatcgacaccaggaatgaaatccat 829
|||||| | ||||||||| || ||||| || || ||||| ||||| ||||| ||||||||
Sbjct: 478 gcaagcaagaacccgaggaaccccctcacttgggccatcaacaccgggaataaaatccat 419
Query: 830 ccttggcccaatccaattaaaaggtctcacgattgtgaattcaaggccattttctgcacc 889
|| || |||||||| || ||||| |||||||| ||||| ||||| ||||| ||||||||
Sbjct: 418 tctgggtccaatccagttgaaaggcctcacgatggtgaactcaagtccattctctgcacc 359
Query: 890 ttcagcaaatacaagcctctcaataagttgcttcgcgcaagcataggaccatctttgttt 949
|||||| | || ||||||||||| | |||||| || || ||||| |||||||| || ||
Sbjct: 358 ctcagcataaactagcctctcaatcaattgctttgcacacgcataagaccatctctgctt 299
Query: 950 cacgattggaccaaaaatacagggcgactcatcttctttaagaacataaaattcaggttc 1009
| | || | ||| ||||| ||||| || ||||||||||||| |||||| || |||| ||
Sbjct: 298 ctcaatggaaccgaaaatgcagggagaggcatcttctttaagcacataatatgcaggatc 239
Query: 1010 ct 1011
||
Sbjct: 238 ct 237
>gb|AI166408.1|AI166408 xylem.est.243 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 646
Score = 119 bits (60), Expect = 4e-025
Identities = 310/392 (79%), Gaps = 1/392 (0%)
Strand = Plus / Minus
Query: 552 acatttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttc 611
||||||||||||||| |||||||||||| || | || ||| || || |||||||||||
Sbjct: 394 acatttgcgtagaccgctgtcatcatttcagcaagctgcctcacagtgacttcattgtta 335
Query: 612 ggattcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcact 671
|| || ||||| || || || || |||||||| | | ||||||||||||||||| |
Sbjct: 334 gggttgccaacgttaaa-atatgaccattggccctggaaggattttcaatcatcaagaga 276
Query: 672 acagcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaaca 731
||||| ||||| |||||||| || || ||||| |||||||| || | || ||||| |||
Sbjct: 275 acagcctcgatggcatccttaatataaacaaatgttctctgggattcgccaccatccaca 216
Query: 732 agcttcaagggctctctccggagcagattgttactgaagcaagccaaaacccgaggcaca 791
||||| | ||||| | || || ||| || || |||||||| | |||||| || ||
Sbjct: 215 agcttgagcggctcccggcgaagaagagcattgctaaagcaagcaagaacccggggaacg 156
Query: 792 ccctcgctaggaccatcgacaccaggaatgaaatccatccttggcccaatccaattaaaa 851
||||| || || ||||| ||||| ||||| |||||||| || || |||||||| || |||
Sbjct: 155 ccctcacttgggccatcaacaccgggaataaaatccattctgggtccaatccagttgaaa 96
Query: 852 ggtctcacgattgtgaattcaaggccattttctgcaccttcagcaaatacaagcctctca 911
|| |||||||| ||||| ||||| ||||| || ||||| |||||| | || |||||||||
Sbjct: 95 ggcctcacgatggtgaactcaagtccattctcagcaccctcagcataaaccagcctctca 36
Query: 912 ataagttgcttcgcgcaagcataggaccatct 943
|| | |||||| || || ||||| ||||||||
Sbjct: 35 atcaattgctttgcacacgcataagaccatct 4
Score = 52.0 bits (26), Expect = 7e-005
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 420 gggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttgtcgctatca 479
||||||||||| || || | |||||||| |||||||| || || |||||||| |||||
Sbjct: 526 gggttccaaccaagttgtctattgattatggtcatgtctggaattctcttgtcactatcg 467
Query: 480 tcgtatccttcgccgtagaact 501
|| ||||| || ||||||||||
Sbjct: 466 tcatatccctcaccgtagaact 445
>gb|CF230545.1|CF230545 PtaC0009F5F0511 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 707
Score = 117 bits (59), Expect = 1e-024
Identities = 257/323 (79%)
Strand = Plus / Minus
Query: 552 acatttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttc 611
||||||||||||||| |||||||||||| || | || ||| || || |||||||||||
Sbjct: 323 acatttgcgtagaccgctgtcatcatttcagcaagctgcctcacagtgacttcattgttg 264
Query: 612 ggattcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcact 671
|| || ||||| || || ||||| |||||||| | | ||||||||||||||||| |
Sbjct: 263 gggttgccaacgttaaaaatgtgaccattggccctggaaggattttcaatcatcaagaga 204
Query: 672 acagcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaaca 731
||||| ||||| |||||||| || || ||||| |||||||| || | || ||||| |||
Sbjct: 203 acagcctcgatggcatccttaatataaacaaatgttctctgggattcgccaccatccaca 144
Query: 732 agcttcaagggctctctccggagcagattgttactgaagcaagccaaaacccgaggcaca 791
||||| | ||||| | || || ||| || || |||||||| | |||||| || |||
Sbjct: 143 agcttgagcggctcccggcgaagaagagcattgctaaagcaagcaagaacccggggaaca 84
Query: 792 ccctcgctaggaccatcgacaccaggaatgaaatccatccttggcccaatccaattaaaa 851
||||| || || ||||| ||||||||||| |||||||| || || |||||||| || |||
Sbjct: 83 ccctcacttgggccatcaacaccaggaataaaatccattctgggtccaatccagttgaaa 24
Query: 852 ggtctcacgattgtgaattcaag 874
|| |||||||| ||||| |||||
Sbjct: 23 ggcctcacgatggtgaactcaag 1
>gb|CN520679.1|CN520679 GQ0108.B3_J24 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_J24 5', mRNA sequence
Length = 817
Score = 111 bits (56), Expect = 9e-023
Identities = 187/232 (80%)
Strand = Plus / Minus
Query: 780 acccgaggcacaccctcgctaggaccatcgacaccaggaatgaaatccatccttggccca 839
||||| || |||||||| || || ||||| ||||| ||||| |||||||| || | |
Sbjct: 762 acccggggnacaccctcacttgggccatcaacaccgggaataaaatccattctggntnna 703
Query: 840 atccaattaaaaggtctcacgattgtgaattcaaggccattttctgcaccttcagcaaat 899
||||| || ||||| |||||||| ||||| ||||| ||||| |||||||| |||||| |
Sbjct: 702 atccagttgaaaggcctcacgatggtgaactcaagtccattctctgcaccctcagcataa 643
Query: 900 acaagcctctcaataagttgcttcgcgcaagcataggaccatctttgtttcacgattgga 959
|| ||||||||||| | |||||| || || ||||| |||||||| || ||| | || | |
Sbjct: 642 accagcctctcaatcaattgctttgcacacgcataagaccatctctgcttctcaatggaa 583
Query: 960 ccaaaaatacagggcgactcatcttctttaagaacataaaattcaggttcct 1011
|||||||| ||||| || ||||||||||||| |||||| || |||| ||||
Sbjct: 582 ccaaaaatgcagggagaggcatcttctttaagcacataatatgcaggatcct 531
Score = 42.1 bits (21), Expect = 0.067
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 1176 tccgccggcgtgcagatagccgccaggttgatggtcagatcggccatcttgatgagcccc 1235
|||||||| || ||||| || ||||| || || |||||||| | |||||||||||| ||
Sbjct: 366 tccgccggagtacagatcgcagccagatttatcgtcagatctgacatcttgatgaggcct 307
Query: 1236 tcgag 1240
|||||
Sbjct: 306 tcgag 302
>gb|CX660168.1|CX660168 PO01018G10 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01018G10 5', mRNA sequence
Length = 694
Score = 111 bits (56), Expect = 9e-023
Identities = 266/336 (79%)
Strand = Plus / Minus
Query: 552 acatttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttc 611
||||||||||||||| |||||||||||| || | || ||| || || |||||||||||
Sbjct: 336 acatttgcgtagaccgctgtcatcatttctgcaagctgcctcacagtgacttcattgtta 277
Query: 612 ggattcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcact 671
|| || ||||| || || || || |||||||| | | ||||||||||||||||| |
Sbjct: 276 gggttgccaacgttaaaaatatgaccattggccctggaaggattttcaatcatcaagaga 217
Query: 672 acagcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaaca 731
||||| ||||| |||||||| || || ||||| |||||||| || | || ||||| |||
Sbjct: 216 acagcctcgatggcatccttaatataaacaaatgttctctgggattcgccaccatccaca 157
Query: 732 agcttcaagggctctctccggagcagattgttactgaagcaagccaaaacccgaggcaca 791
||||| | ||||| | || || ||| || || |||||||| | ||||||||| ||
Sbjct: 156 agcttgagcggctcccggcgaagaagagcattgctaaagcaagcaagaacccgaggaacc 97
Query: 792 ccctcgctaggaccatcgacaccaggaatgaaatccatccttggcccaatccaattaaaa 851
||||| || || ||||| ||||| ||||| |||||||| || || |||||||| || |||
Sbjct: 96 ccctcacttgggccatcaacaccgggaataaaatccattctgggtccaatccagttgaaa 37
Query: 852 ggtctcacgattgtgaattcaaggccattttctgca 887
|| |||||||| ||||| ||||| ||||| ||||||
Sbjct: 36 ggcctcacgatggtgaactcaagtccattctctgca 1
>gb|DT516163.1|DT516163 WS02430.B21_J10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02430_J10 3', mRNA sequence
Length = 897
Score = 99.6 bits (50), Expect = 3e-019
Identities = 269/342 (78%)
Strand = Plus / Plus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||||||| |||||||||||| || | || |||||| || ||||||||||| ||
Sbjct: 501 tttgcgtagaccgctgtcatcatttcagcaagctgcctaacagtgacttcattgttaggg 560
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| |||||||| || || || || ||||| | |||||||||||||||||| | ||
Sbjct: 561 ttgccaacattaaaaatatgaccgttggccctgtcaggattttcaatcatcaagaggacc 620
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaagc 734
|| || || |||||||||||||| ||||| |||||||| || | ||| ||||||||||||
Sbjct: 621 gcctctatggcatccttgatgtaaacaaaagttctctgggattcaccaccatcaacaagc 680
Query: 735 ttcaagggctctctccggagcagattgttactgaagcaagccaaaacccgaggcacaccc 794
|| | |||| | || || ||| || |||||||| |||| ||||| || ||||||
Sbjct: 681 ttgagttgctcacgacgaagaagagcattgctgaagcatgccagaaccctgggaacaccc 740
Query: 795 tcgctaggaccatcgacaccaggaatgaaatccatccttggcccaatccaattaaaaggt 854
|| || || ||||| | || || ||||||||||| || || |||||||| || || ||
Sbjct: 741 tcacttgggccatcaatgccgggtatgaaatccattctgggtccaatccagttgaagggc 800
Query: 855 ctcacgattgtgaattcaaggccattttctgcaccttcagca 896
||||| || ||||| ||||| ||||| |||||||| ||||||
Sbjct: 801 ctcacaatggtgaactcaagcccattctctgcaccctcagca 842
Score = 71.9 bits (36), Expect = 7e-011
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 414 gtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttgtcg 473
||||| ||||||||||| || || || |||||||| |||||||| || || ||||||||
Sbjct: 360 gtcttggggttccaaccaagttgtttattgattatggtcatgtctggaattctcttgtca 419
Query: 474 ctatcatcgtatccttcgccgtagaact 501
||||| || |||||||| ||||||||||
Sbjct: 420 ctatcgtcatatccttcaccgtagaact 447
>gb|BI129514.1|BI129514 G091P73Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 467
Score = 93.7 bits (47), Expect = 2e-017
Identities = 344/443 (77%)
Strand = Plus / Minus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||||||| |||||||||||| || | || |||||| || ||||||||||| ||
Sbjct: 459 tttgcgtagaccgctgtcatcatttcagcaagctgcctaacagtgacttcattgttaggg 400
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| |||||||| || || || || ||||| | |||||||||||||||||| | ||
Sbjct: 399 ttgccaacattaaaaatatgaccgttggccctgtcaggattttcaatcatcaagaggacc 340
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaagc 734
|| || || ||||||||||| || ||||| |||||||| || | ||| ||||||||||||
Sbjct: 339 gcctctatggcatccttgatataaacaaaagttctctgggattcaccaccatcaacaagc 280
Query: 735 ttcaagggctctctccggagcagattgttactgaagcaagccaaaacccgaggcacaccc 794
|| | |||| | || || ||| || |||||||| |||| ||||| || ||||||
Sbjct: 279 ttgagttgctcacgacgaagaagaccattgctgaagcatgccagaaccctgggaacaccc 220
Query: 795 tcgctaggaccatcgacaccaggaatgaaatccatccttggcccaatccaattaaaaggt 854
|| || || ||||| | || || ||||||||||| || |||||||| || || || ||
Sbjct: 219 tcacttgggccatcaatgccgggtatgaaatccattctgggcccaatacagttgaagggc 160
Query: 855 ctcacgattgtgaattcaaggccattttctgcaccttcagcaaatacaagcctctcaata 914
||||| || ||||| || || ||||| |||||||| |||||| | | | |||||||||
Sbjct: 159 ctcacaatggtgaactcgagcccattctctgcaccctcagcataaatcaacctctcaatc 100
Query: 915 agttgcttcgcgcaagcataggaccatctttgtttcacgattggaccaaaaatacagggc 974
| ||||| || || ||||||||||| || || ||| |||| | ||| ||||| |||||
Sbjct: 99 aactgctttgcacatgcataggaccacctctgcttctcgatagaaccgaaaatgcaggga 40
Query: 975 gactcatcttctttaagaacata 997
|| |||||||||||| |||||
Sbjct: 39 gaggtatcttctttaaggacata 17
>gb|CN550185.1|CN550185 GQ0242.B3_D12 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0242_D12 5', mRNA sequence
Length = 665
Score = 93.7 bits (47), Expect = 2e-017
Identities = 301/386 (77%)
Strand = Plus / Minus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||||||| |||||||||||| || | || |||||| || ||||||||||| ||
Sbjct: 407 tttgcgtagaccgctgtcatcatttcagcaagctgcctaacagtgacttcattgttaggg 348
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| |||||||| || || || || ||||| | |||||||||||||||||| | ||
Sbjct: 347 ttgccaacattaaaaatatgaccgttggccctgtcaggattttcaatcatcaagaggacc 288
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaagc 734
|| || || |||||||||||||| ||||| |||||||| || | ||| ||||||||||||
Sbjct: 287 gcctctatggcatccttgatgtaaacaaaagttctctgggattcaccaccatcaacaagc 228
Query: 735 ttcaagggctctctccggagcagattgttactgaagcaagccaaaacccgaggcacaccc 794
|| | |||| | || || ||| || | |||||| |||| ||||| || ||||||
Sbjct: 227 ttgagttgctcacgacgaagaagagcattgcngaagcatgccagaaccctgggaacaccc 168
Query: 795 tcgctaggaccatcgacaccaggaatgaaatccatccttggcccaatccaattaaaaggt 854
|| || || ||||| | || || ||||||||||| || || |||||||| || || ||
Sbjct: 167 tcacttgggccatcaatgccgggtatgaaatccattctgggtccaatccagttgaagggc 108
Query: 855 ctcacgattgtgaattcaaggccattttctgcaccttcagcaaatacaagcctctcaata 914
||||| || ||||| ||||| ||||| |||||||| |||||| | | | |||||||||
Sbjct: 107 ctcacaatggtgaactcaagcccattctctgcaccctcagcataaatcaacctctcaatc 48
Query: 915 agttgcttcgcgcaagcataggacca 940
| ||||| || || |||||||||||
Sbjct: 47 aactgctttgcacatgcataggacca 22
>gb|DV465584.1|DV465584 MTUNUL1.P40.E06 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 790
Score = 93.7 bits (47), Expect = 2e-017
Identities = 134/163 (82%)
Strand = Plus / Minus
Query: 849 aaaggtctcacgattgtgaattcaaggccattttctgcaccttcagcaaatacaagcctc 908
||||| |||||||| ||||| ||||| ||||| |||||||| |||||| | || ||||||
Sbjct: 782 aaaggcctcacgatggtgaactcaagtccattctctgcaccctcagcataaaccagcctc 723
Query: 909 tcaataagttgcttcgcgcaagcataggaccatctttgtttcacgattggaccaaaaata 968
||||| | |||||| || || ||||| |||||||| || ||| | || | |||||||||
Sbjct: 722 tcaatcaattgctttgcacatgcataagaccatctctgcttctcaatggaaccaaaaatg 663
Query: 969 cagggcgactcatcttctttaagaacataaaattcaggttcct 1011
||||| || ||||||||||||| |||||| || |||| ||||
Sbjct: 662 cagggagaggcatcttctttaagcacataatatgcaggatcct 620
Score = 42.1 bits (21), Expect = 0.067
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 1176 tccgccggcgtgcagatagccgccaggttgatggtcagatcggccatcttgatgagcccc 1235
|||||||| || ||||| || ||||| || || |||||||| | |||||||||||| ||
Sbjct: 455 tccgccggagtacagatcgcagccagatttatcgtcagatctgacatcttgatgaggcct 396
Query: 1236 tcgag 1240
|||||
Sbjct: 395 tcgag 391
>gb|CN524322.1|CN524322 GQ015M17.T3_E07 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M17_E07 5', mRNA sequence
Length = 736
Score = 91.7 bits (46), Expect = 8e-017
Identities = 133/162 (82%)
Strand = Plus / Minus
Query: 850 aaggtctcacgattgtgaattcaaggccattttctgcaccttcagcaaatacaagcctct 909
|||| |||||||| ||||| ||||| ||||| |||||||| |||||| | || |||||||
Sbjct: 682 aaggcctcacgatggtgaactcaagtccattctctgcaccctcagcataaaccagcctct 623
Query: 910 caataagttgcttcgcgcaagcataggaccatctttgtttcacgattggaccaaaaatac 969
|||| | |||||| || || ||||| |||||||| || ||| | || | ||||||||| |
Sbjct: 622 caatcaattgctttgcacacgcataagaccatctctgcttctcaatggaaccaaaaatgc 563
Query: 970 agggcgactcatcttctttaagaacataaaattcaggttcct 1011
|||| || ||||||||||||| |||||| || |||| ||||
Sbjct: 562 agggagaggcatcttctttaagcacataatatgcaggatcct 521
Score = 42.1 bits (21), Expect = 0.067
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 1176 tccgccggcgtgcagatagccgccaggttgatggtcagatcggccatcttgatgagcccc 1235
|||||||| || ||||| || ||||| || || |||||||| | |||||||||||| ||
Sbjct: 356 tccgccggagtacagatcgcagccagatttatcgtcagatctgacatcttgatgaggcct 297
Query: 1236 tcgag 1240
|||||
Sbjct: 296 tcgag 292
>gb|CV252480.1|CV252480 PX0011.B21_P17 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0011_P17 3', mRNA sequence
Length = 648
Score = 91.7 bits (46), Expect = 8e-017
Identities = 148/182 (81%)
Strand = Plus / Plus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||||||| |||||||||||| || | || |||||| || ||||||||||| ||
Sbjct: 429 tttgcgtagaccgctgtcatcatttcagcaagctgcctaacagtgacttcattgttaggg 488
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| |||||||| || || || || ||||| | |||||||||||||||||| | ||
Sbjct: 489 ttgccaacattaaaaatatgaccgttggccctgtcaggattttcaatcatcaagaggacc 548
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaagc 734
|| || || |||||||||||||| ||||| |||||||| || | ||| ||||||||||||
Sbjct: 549 gcctctatggcatccttgatgtaaacaaaagttctctgggattcaccaccatcaacaagc 608
Query: 735 tt 736
||
Sbjct: 609 tt 610
Score = 71.9 bits (36), Expect = 7e-011
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 414 gtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttgtcg 473
||||| ||||||||||| || || || |||||||| |||||||| || || ||||||||
Sbjct: 288 gtcttggggttccaaccaagttgtttattgattatggtcatgtctggaattctcttgtca 347
Query: 474 ctatcatcgtatccttcgccgtagaact 501
||||| || |||||||| ||||||||||
Sbjct: 348 ctatcgtcatatccttcaccgtagaact 375
>gb|CV281876.1|CV281876 WS0183.B21_B16 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0183_B16 3', mRNA sequence
Length = 871
Score = 91.7 bits (46), Expect = 8e-017
Identities = 301/386 (77%)
Strand = Plus / Plus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||||||| |||||||||||| || | || |||||| || ||||||||||| ||
Sbjct: 478 tttgcgtagaccgctgtcatcatttcagcaagctgcctaacagtgacttcattgttaggg 537
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| |||||||| || || || || ||||| | |||||||||||||||||| | ||
Sbjct: 538 ttgccaacattaaaaatatgaccgttggccctgtcaggattttcaatcatcaagaggacc 597
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaagc 734
|| || || |||||||||||||| ||||| |||||||| || | ||| ||||||||||||
Sbjct: 598 gcctctatggcatccttgatgtaaacaaaagttctctgggattcaccaccatcaacaagc 657
Query: 735 ttcaagggctctctccggagcagattgttactgaagcaagccaaaacccgaggcacaccc 794
|| | |||| | || || ||| || |||||||| |||| ||||| || ||||||
Sbjct: 658 ttgagttgctcacgacgaagaagagcattgctgaagcatgccagaaccctgggaacaccc 717
Query: 795 tcgctaggaccatcgacaccaggaatgaaatccatccttggcccaatccaattaaaaggt 854
|| || || ||||| | || || ||||||||||| || || |||||||| || || ||
Sbjct: 718 tcacttgggccatcaatgccgggtatgaaatccattctgggtccaatccagttgaagggc 777
Query: 855 ctcacgattgtgaattcaaggccattttctgcaccttcagcaaatacaagcctctcaata 914
||||| || ||||| || || ||||| |||||||| |||||| | | | |||||||||
Sbjct: 778 ctcacaatggtgaactctagcccattctctgcaccctcagcataaatcaacctctcaatc 837
Query: 915 agttgcttcgcgcaagcataggacca 940
| ||||| || || |||||||||||
Sbjct: 838 aactgctttgcacatgcataggacca 863
>gb|DT488835.1|DT488835 WS02537.B21_J02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02537_J02 3', mRNA sequence
Length = 923
Score = 91.7 bits (46), Expect = 8e-017
Identities = 148/182 (81%)
Strand = Plus / Plus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||||||| |||||||||||| || | || |||||| || ||||||||||| ||
Sbjct: 671 tttgcgtagaccgctgtcatcatttcagcaagctgcctaacagtgacttcattgttaggg 730
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| |||||||| || || || || ||||| | |||||||||||||||||| | ||
Sbjct: 731 ttgccaacattaaaaatatgaccgttggccctgtcaggattttcaatcatcaagaggacc 790
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaagc 734
|| || || |||||||||||||| ||||| |||||||| || | ||| ||||||||||||
Sbjct: 791 gcctctatggcatccttgatgtaaacaaaagttctctgggattcaccaccatcaacaagc 850
Query: 735 tt 736
||
Sbjct: 851 tt 852
Score = 71.9 bits (36), Expect = 7e-011
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 414 gtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttgtcg 473
||||| ||||||||||| || || || |||||||| |||||||| || || ||||||||
Sbjct: 530 gtcttggggttccaaccaagttgtttattgattatggtcatgtctggaattctcttgtca 589
Query: 474 ctatcatcgtatccttcgccgtagaact 501
||||| || |||||||| ||||||||||
Sbjct: 590 ctatcgtcatatccttcaccgtagaact 617
>gb|DT515994.1|DT515994 WS02430.B21_B15 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02430_B15 3', mRNA sequence
Length = 866
Score = 91.7 bits (46), Expect = 8e-017
Identities = 148/182 (81%)
Strand = Plus / Plus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||||||| |||||||||||| || | || |||||| || ||||||||||| ||
Sbjct: 671 tttgcgtagaccgctgtcatcatttcagcaagctgcctaacagtgacttcattgttaggg 730
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| |||||||| || || || || ||||| | |||||||||||||||||| | ||
Sbjct: 731 ttgccaacattaaaaatatgaccgttggccctgtcaggattttcaatcatcaagaggacc 790
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaagc 734
|| || || |||||||||||||| ||||| |||||||| || | ||| ||||||||||||
Sbjct: 791 gcctctatggcatccttgatgtaaacaaaagttctctgggattcaccaccatcaacaagc 850
Query: 735 tt 736
||
Sbjct: 851 tt 852
Score = 71.9 bits (36), Expect = 7e-011
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 414 gtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttgtcg 473
||||| ||||||||||| || || || |||||||| |||||||| || || ||||||||
Sbjct: 530 gtcttggggttccaaccaagttgtttattgattatggtcatgtctggaattctcttgtca 589
Query: 474 ctatcatcgtatccttcgccgtagaact 501
||||| || |||||||| ||||||||||
Sbjct: 590 ctatcgtcatatccttcaccgtagaact 617
>gb|DT519285.1|DT519285 WS02440.B21_P17 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02440_P17 3', mRNA sequence
Length = 964
Score = 91.7 bits (46), Expect = 8e-017
Identities = 148/182 (81%)
Strand = Plus / Plus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||||||| |||||||||||| || | || |||||| || ||||||||||| ||
Sbjct: 665 tttgcgtagaccgctgtcatcatttcagcaagctgcctaacagtgacttcattgttaggg 724
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| |||||||| || || || || ||||| | |||||||||||||||||| | ||
Sbjct: 725 ttgccaacattaaaaatatgaccgttggccctgtcaggattttcaatcatcaagaggacc 784
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaagc 734
|| || || |||||||||||||| ||||| |||||||| || | ||| ||||||||||||
Sbjct: 785 gcctctatggcatccttgatgtaaacaaaagttctctgggattcaccaccatcaacaagc 844
Query: 735 tt 736
||
Sbjct: 845 tt 846
Score = 71.9 bits (36), Expect = 7e-011
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 414 gtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttgtcg 473
||||| ||||||||||| || || || |||||||| |||||||| || || ||||||||
Sbjct: 524 gtcttggggttccaaccaagttgtttattgattatggtcatgtctggaattctcttgtca 583
Query: 474 ctatcatcgtatccttcgccgtagaact 501
||||| || |||||||| ||||||||||
Sbjct: 584 ctatcgtcatatccttcaccgtagaact 611
>gb|DT520763.1|DT520763 WS02448.B21_H13 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02448_H13 3', mRNA sequence
Length = 822
Score = 91.7 bits (46), Expect = 8e-017
Identities = 148/182 (81%)
Strand = Plus / Plus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||||||| |||||||||||| || | || |||||| || ||||||||||| ||
Sbjct: 627 tttgcgtagaccgctgtcatcatttcagcaagctgcctaacagtgacttcattgttaggg 686
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| |||||||| || || || || ||||| | |||||||||||||||||| | ||
Sbjct: 687 ttgccaacattaaaaatatgaccgttggccctgtcaggattttcaatcatcaagaggacc 746
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaagc 734
|| || || |||||||||||||| ||||| |||||||| || | ||| ||||||||||||
Sbjct: 747 gcctctatggcatccttgatgtaaacaaaagttctctgggattcaccaccatcaacaagc 806
Query: 735 tt 736
||
Sbjct: 807 tt 808
Score = 71.9 bits (36), Expect = 7e-011
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 414 gtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttgtcg 473
||||| ||||||||||| || || || |||||||| |||||||| || || ||||||||
Sbjct: 486 gtcttggggttccaaccaagttgtttattgattatggtcatgtctggaattctcttgtca 545
Query: 474 ctatcatcgtatccttcgccgtagaact 501
||||| || |||||||| ||||||||||
Sbjct: 546 ctatcgtcatatccttcaccgtagaact 573
>gb|CN549636.1|CN549636 GQ0241.B3_O18 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0241_O18 5', mRNA sequence
Length = 811
Score = 89.7 bits (45), Expect = 3e-016
Identities = 129/157 (82%)
Strand = Plus / Minus
Query: 855 ctcacgattgtgaattcaaggccattttctgcaccttcagcaaatacaagcctctcaata 914
|||||||| ||||| ||||| ||||| |||||||| |||||| | || |||||||||||
Sbjct: 681 ctcacgatggtgaactcaagtccattctctgcaccctcagcataaaccagcctctcaatc 622
Query: 915 agttgcttcgcgcaagcataggaccatctttgtttcacgattggaccaaaaatacagggc 974
| |||||| || || ||||| |||||||| || ||| | || | ||||||||| |||||
Sbjct: 621 aattgctttgcacacgcataagaccatctctgcttctcaatggaaccaaaaatgcaggga 562
Query: 975 gactcatcttctttaagaacataaaattcaggttcct 1011
|| ||||||||||||| |||||| || |||| ||||
Sbjct: 561 gaggcatcttctttaagcacataatatgcaggatcct 525
Score = 42.1 bits (21), Expect = 0.067
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 1176 tccgccggcgtgcagatagccgccaggttgatggtcagatcggccatcttgatgagcccc 1235
|||||||| || ||||| || ||||| || || |||||||| | |||||||||||| ||
Sbjct: 360 tccgccggagtacagatcgcagccagatttatcgtcagatctgacatcttgatgaggcct 301
Query: 1236 tcgag 1240
|||||
Sbjct: 300 tcgag 296
>gb|DT476504.1|DT476504 WS01229.B21_M22 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_M22 3', mRNA sequence
Length = 861
Score = 87.7 bits (44), Expect = 1e-015
Identities = 146/180 (81%)
Strand = Plus / Plus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||||||| |||||||||||| || | || |||||| || ||||||||||| ||
Sbjct: 682 tttgcgtagaccgctgtcatcatttcagcaagctgcctaacagtgacttcattgttaggg 741
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| |||||||| || || || || ||||| | |||||||||||||||||| | ||
Sbjct: 742 ttgccaacattaaaaatatgaccgttggccctgtcaggattttcaatcatcaagaggacc 801
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaagc 734
|| || || |||||||||||||| ||||| |||||||| || | ||| ||||||||||||
Sbjct: 802 gcctctatggcatccttgatgtaaacaaaagttctctgggattcaccaccatcaacaagc 861
Score = 71.9 bits (36), Expect = 7e-011
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 414 gtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttgtcg 473
||||| ||||||||||| || || || |||||||| |||||||| || || ||||||||
Sbjct: 541 gtcttggggttccaaccaagttgtttattgattatggtcatgtctggaattctcttgtca 600
Query: 474 ctatcatcgtatccttcgccgtagaact 501
||||| || |||||||| ||||||||||
Sbjct: 601 ctatcgtcatatccttcaccgtagaact 628
>gb|CA933994.1|CA933994 MTU3TS.P1.D12 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 687
Score = 85.7 bits (43), Expect = 5e-015
Identities = 343/443 (77%)
Strand = Plus / Minus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||||||| |||||||||||| || | || |||||| || ||||||||||| ||
Sbjct: 554 tttgcgtagaccgctgtcatcatttcagcaagctgcctaacagtgacttcattgttaggg 495
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| |||||||| || | || || ||||| | |||||||||||||||||| | ||
Sbjct: 494 ttgccaacattaaaaagatgaccgttggccctgtcaggattttcaatcatcaagaggacc 435
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaagc 734
|| || || ||||||||||| || ||||| |||||||| || | ||| ||||||||||||
Sbjct: 434 gcctctatggcatccttgatataaacaaaagttctctgggattcaccaccatcaacaagc 375
Query: 735 ttcaagggctctctccggagcagattgttactgaagcaagccaaaacccgaggcacaccc 794
|| | |||| | || || ||| || |||||||| |||| ||||| || ||||||
Sbjct: 374 ttgagttgctcacgacgaagaagagcattgctgaagcatgccagaaccctgggaacaccc 315
Query: 795 tcgctaggaccatcgacaccaggaatgaaatccatccttggcccaatccaattaaaaggt 854
|| || || ||||| | || || ||||||||||| || || |||||||| || || ||
Sbjct: 314 tcacttgggccatcaatgccgggtatgaaatccattctgggtccaatccagttgaagggc 255
Query: 855 ctcacgattgtgaattcaaggccattttctgcaccttcagcaaatacaagcctctcaata 914
||||| || ||||| || || ||||| |||||||| |||||| | | | |||||||||
Sbjct: 254 ctcacaatggtgaactcgagcccattctctgcaccctcagcataaatcaacctctcaatc 195
Query: 915 agttgcttcgcgcaagcataggaccatctttgtttcacgattggaccaaaaatacagggc 974
| ||||| || || ||||||||||| || || ||| |||| | ||| ||||| |||||
Sbjct: 194 aactgctttgcacatgcataggaccacctctgcttctcgatagaaccgaaaatgcaggga 135
Query: 975 gactcatcttctttaagaacata 997
|| |||||||||||| |||||
Sbjct: 134 gaggtatcttctttaaggacata 112
>gb|CK092684.1|CK092684 G091P73.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G091P73 3', mRNA sequence
Length = 747
Score = 83.8 bits (42), Expect = 2e-014
Identities = 147/182 (80%)
Strand = Plus / Plus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||||||| |||||||||||| || | || |||||| || ||||||||||| ||
Sbjct: 462 tttgcgtagaccgctgtcatcatttcagcaagctgcctaacagtgacttcattgttaggg 521
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| |||||||| || || || || ||||| | |||||||||||||||||| | ||
Sbjct: 522 ttgccaacattaaaaatatgaccgttggccctgtcaggattttcaatcatcaagaggacc 581
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaagc 734
|| || || ||||||||||| || ||||| |||||||| || | ||| ||||||||||||
Sbjct: 582 gcctctatggcatccttgatataaacaaaagttctctgggattcaccaccatcaacaagc 641
Query: 735 tt 736
||
Sbjct: 642 tt 643
Score = 71.9 bits (36), Expect = 7e-011
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 414 gtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttgtcg 473
||||| ||||||||||| || || || |||||||| |||||||| || || ||||||||
Sbjct: 321 gtcttggggttccaaccaagttgtttattgattatggtcatgtctggaattctcttgtca 380
Query: 474 ctatcatcgtatccttcgccgtagaact 501
||||| || |||||||| ||||||||||
Sbjct: 381 ctatcgtcatatccttcaccgtagaact 408
>gb|AJ777755.1|AJ777755 AJ777755 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400034F08F1, mRNA sequence
Length = 677
Score = 83.8 bits (42), Expect = 2e-014
Identities = 336/434 (77%)
Strand = Plus / Minus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
||||| |||||| |||||||||||| || | || |||||| || || |||||||| ||
Sbjct: 436 tttgcatagaccgctgtcatcatttcagcaagctgcctaacagtgacgtcattgttaggg 377
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| |||||||| || || || || ||||| | |||||||||| ||||||| | ||
Sbjct: 376 ttgccaacattaaaaatatgaccgttggccctgtcaggattttcgatcatcaagaggacc 317
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaagc 734
|| || || ||||||||||| || ||||| |||||||| || | ||| ||||||||||||
Sbjct: 316 gcctctatggcatccttgatataaacaaaagttctctgggattcaccaccatcaacaagc 257
Query: 735 ttcaagggctctctccggagcagattgttactgaagcaagccaaaacccgaggcacaccc 794
|| | |||| | || || ||| || |||||||| |||| ||||| || ||||||
Sbjct: 256 ttgagttgctcacgacgaagaagagcattgctgaagcatgccagaaccctgggaacaccc 197
Query: 795 tcgctaggaccatcgacaccaggaatgaaatccatccttggcccaatccaattaaaaggt 854
|| || || ||||| | ||||| ||||||||||| || || |||||||| || |||||
Sbjct: 196 tcacttgggccatcaatgccaggtatgaaatccattctgggtccaatccagttgaaaggc 137
Query: 855 ctcacgattgtgaattcaaggccattttctgcaccttcagcaaatacaagcctctcaata 914
||||| || ||||| ||||| ||||| || ||||| |||||| | | | |||||||||
Sbjct: 136 ctcacaatggtgaactcaagcccattctccgcaccctcagcataaatcaacctctcaatc 77
Query: 915 agttgcttcgcgcaagcataggaccatctttgtttcacgattggaccaaaaatacagggc 974
| ||||| || || ||||||||||| || || ||| |||| | ||| ||||| |||||
Sbjct: 76 aactgctttgcacatgcataggaccacctctgcttctcgatagaaccgaaaatgcaggga 17
Query: 975 gactcatcttcttt 988
|| ||||||||||
Sbjct: 16 gaggcatcttcttt 3
Score = 63.9 bits (32), Expect = 2e-008
Identities = 71/84 (84%)
Strand = Plus / Minus
Query: 414 gtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttgtcg 473
||||| ||||||||||| || || || |||||||| |||||||| || || ||||||||
Sbjct: 577 gtcttggggttccaaccaagttgtttattgattatggtcatgtctggaattctcttgtca 518
Query: 474 ctatcatcgtatccttcgccgtag 497
||||| || |||||||| ||||||
Sbjct: 517 ctatcgtcatatccttcaccgtag 494
>gb|CV233888.1|CV233888 WS01212.B21_M15 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01212_M15 3', mRNA sequence
Length = 879
Score = 81.8 bits (41), Expect = 8e-014
Identities = 242/309 (78%)
Strand = Plus / Plus
Query: 552 acatttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttc 611
||||||||||||||| |||||||||||| || | || ||| || || |||||||||||
Sbjct: 571 acatttgcgtagaccgctgtcatcatttcagcaagctgcctcacagtgacttcattgtta 630
Query: 612 ggattcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcact 671
|| || ||||| || || || || |||||||| | | ||||||||||||||||| |
Sbjct: 631 gggttgccaacgttaaaaatatgaccattggccctggaaggattttcaatcatcaagaga 690
Query: 672 acagcttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaaca 731
||||| ||||| |||||||| || || ||||| |||||||| || | || ||||| |||
Sbjct: 691 acagcctcgatggcatccttaatataaacaaatgttctctgggattcgccaccatccaca 750
Query: 732 agcttcaagggctctctccggagcagattgttactgaagcaagccaaaacccgaggcaca 791
||||| | ||||| | || || ||| || || |||||||| | |||||| || ||
Sbjct: 751 agcttgagcggctcccggcgaagaagagcattgctaaagcaagcaagaacccggggaacg 810
Query: 792 ccctcgctaggaccatcgacaccaggaatgaaatccatccttggcccaatccaattaaaa 851
||||| || || ||||| ||||| ||||| |||||||| || || |||||||| || |||
Sbjct: 811 ccctcacttgggccatcaacaccgggaataaaatccattctgggtccaatccagttgaaa 870
Query: 852 ggtctcacg 860
|| ||||||
Sbjct: 871 ggcctcacg 879
Score = 60.0 bits (30), Expect = 3e-007
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 408 agaggcgtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctc 467
|||| |||||| ||||||||||| || || | |||||||| |||||||| || || |||
Sbjct: 427 agagacgtcttggggttccaaccaagttgtctattgattatggtcatgtctggaattctc 486
Query: 468 ttgtcgctatcatcgtatccttcgccgtagaact 501
||||| ||||| || ||||| || ||||||||||
Sbjct: 487 ttgtcactatcgtcatatccctcaccgtagaact 520
>gb|CN519681.1|CN519681 GQ0101.B3_G24 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0101_G24 5', mRNA sequence
Length = 538
Score = 77.8 bits (39), Expect = 1e-012
Identities = 127/157 (80%)
Strand = Plus / Minus
Query: 855 ctcacgattgtgaattcaaggccattttctgcaccttcagcaaatacaagcctctcaata 914
|||||||| ||||| ||||| ||||| || ||||| |||||| | | |||||||||||
Sbjct: 527 ctcacgatggtgaactcaagtccattctcagcaccctcagcatannccagcctctcaatc 468
Query: 915 agttgcttcgcgcaagcataggaccatctttgtttcacgattggaccaaaaatacagggc 974
| |||||| || || ||||| |||||||| || ||| | || | ||||||||| |||||
Sbjct: 467 aattgctttgcacacgcataagaccatctctgcttctcaatggaaccaaaaatgcaggga 408
Query: 975 gactcatcttctttaagaacataaaattcaggttcct 1011
|| ||||||||||||| |||||| || |||| ||||
Sbjct: 407 gaggcatcttctttaagcacataatatgcaggatcct 371
Score = 42.1 bits (21), Expect = 0.067
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 1176 tccgccggcgtgcagatagccgccaggttgatggtcagatcggccatcttgatgagcccc 1235
|||||||| || ||||| || ||||| || || |||||||| | |||||||||||| ||
Sbjct: 206 tccgccggagtacagatcgcagccagatttatcgtcagatctgacatcttgatgaggcct 147
Query: 1236 tcgag 1240
|||||
Sbjct: 146 tcgag 142
>gb|DT519527.1|DT519527 WS02441.B21_O02 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02441_O02 3', mRNA sequence
Length = 711
Score = 77.8 bits (39), Expect = 1e-012
Identities = 148/183 (80%), Gaps = 1/183 (0%)
Strand = Plus / Plus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||||||| |||||||||||| || | || |||||| || ||||||||||| ||
Sbjct: 516 tttgcgtagaccgctgtcatcatttcagcaagctgcctaacagtgacttcattgttaggg 575
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| |||||||| || || || || ||||| | |||||||||||||||||| | ||
Sbjct: 576 ttgccaacattaaaaatatgaccgttggccctgtcaggattttcaatcatcaagaggacc 635
Query: 675 g-cttcgatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaag 733
| | || || |||||||||||||| ||||| |||||||| || | ||| |||||||||||
Sbjct: 636 gccctctatggcatccttgatgtaaacaaaagttctctgggattcaccaccatcaacaag 695
Query: 734 ctt 736
|||
Sbjct: 696 ctt 698
Score = 71.9 bits (36), Expect = 7e-011
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 414 gtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttgtcg 473
||||| ||||||||||| || || || |||||||| |||||||| || || ||||||||
Sbjct: 375 gtcttggggttccaaccaagttgtttattgattatggtcatgtctggaattctcttgtca 434
Query: 474 ctatcatcgtatccttcgccgtagaact 501
||||| || |||||||| ||||||||||
Sbjct: 435 ctatcgtcatatccttcaccgtagaact 462
>gb|DT524093.1|DT524093 WS02041.C21.1_I11 PTxN-IB-N-A-11 Populus trichocarpa x Populus
nigra cDNA clone WS02041_I11 3', mRNA sequence
Length = 854
Score = 75.8 bits (38), Expect = 5e-012
Identities = 128/158 (81%)
Strand = Plus / Plus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||||||| |||||||||||| || | || |||||| || ||||||||||| ||
Sbjct: 693 tttgcgtagaccgctgtcatcatttcagcaagctgcctaacagtgacttcattgttaggg 752
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactaca 674
|| |||||||| || || || || ||||| | |||||||||||||||||| | ||
Sbjct: 753 ttgccaacattaaaaatatgaccgttggccctgtcaggattttcaatcatcaagaggacc 812
Query: 675 gcttcgatagcatccttgatgtagacaaaggttctctg 712
|| || || |||||||||||||| ||||| ||||||||
Sbjct: 813 gcctctatggcatccttgatgtaaacaaaagttctctg 850
Score = 71.9 bits (36), Expect = 7e-011
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 414 gtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttgtcg 473
||||| ||||||||||| || || || |||||||| |||||||| || || ||||||||
Sbjct: 552 gtcttggggttccaaccaagttgtttattgattatggtcatgtctggaattctcttgtca 611
Query: 474 ctatcatcgtatccttcgccgtagaact 501
||||| || |||||||| ||||||||||
Sbjct: 612 ctatcgtcatatccttcaccgtagaact 639
>gb|AI166641.1|AI166641 xylem.est.453 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 308
Score = 73.8 bits (37), Expect = 2e-011
Identities = 130/161 (80%)
Strand = Plus / Minus
Query: 552 acatttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttc 611
||||||||||||||| |||||||||||| || | || ||| || || |||||||||||
Sbjct: 168 acatttgcgtagaccgctgtcatcatttcagcaagctgcctcacagtgacttcattgtta 109
Query: 612 ggattcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcact 671
|| || ||||| || || || || |||||||| | | ||||||||||||||||| |
Sbjct: 108 gggttgccaacgttaaaaatatgaccattggccctggaaggattttcaatcatcaagaga 49
Query: 672 acagcttcgatagcatccttgatgtagacaaaggttctctg 712
||||| ||||| |||||||| || || ||||| ||||||||
Sbjct: 48 acagcctcgatggcatccttaatataaacaaatgttctctg 8
Score = 52.0 bits (26), Expect = 7e-005
Identities = 68/82 (82%)
Strand = Plus / Minus
Query: 420 gggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttgtcgctatca 479
||||||||||| || || | |||||||| |||||||| || || |||||||| |||||
Sbjct: 300 gggttccaaccaagttgtctattgattatggtcatgtctggaattctcttgtcactatcg 241
Query: 480 tcgtatccttcgccgtagaact 501
|| ||||| || ||||||||||
Sbjct: 240 tcatatccctcaccgtagaact 219
>gb|CV131949.1|CV131949 L4P04d03 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 773
Score = 73.8 bits (37), Expect = 2e-011
Identities = 142/177 (80%)
Strand = Plus / Minus
Query: 560 gtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcggattccc 619
||||||| |||||||||||| ||| | || |||||| || ||||||||||| || || |
Sbjct: 772 gtagaccgctgtcatcatttcggcaagctgcctaacagtgacttcattgttagggttgcg 713
Query: 620 aacattgaagatgtggccattggctcgagcaggattttcaatcatcagcactacagcttc 679
|||||| || || || || ||||| | ||||||| |||||||||| | || || ||
Sbjct: 712 aacattaaaaatatgaccgttggccctgtcaggattgtcaatcatcaagaggaccgcctc 653
Query: 680 gatagcatccttgatgtagacaaaggttctctgagactgacccccatcaacaagctt 736
|| |||||||||||||| ||||| |||||||| || | ||| ||||||||||||||
Sbjct: 652 tatggcatccttgatgtaaacaaaagttctctgggattcaccaccatcaacaagctt 596
Score = 56.0 bits (28), Expect = 4e-006
Identities = 176/224 (78%), Gaps = 1/224 (0%)
Strand = Plus / Minus
Query: 765 ctgaagcaagccaaaacccgaggcacaccctcgctaggaccatcgacaccaggaatgaaa 824
|||||||| |||| ||||| || |||||||| || || ||||| | || || ||||||
Sbjct: 567 ctgaagcatgccagaaccctgggaacaccctcacttgggccatcaatgccgggtatgaaa 508
Query: 825 tcc-atccttggcccaatccaattaaaaggtctcacgattgtgaattcaaggccattttc 883
||| || || || |||||||| || || || |||||||| ||||| ||||| ||||| ||
Sbjct: 507 tcccattctgggtccaatccagttgaagggcctcacgatggtgaactcaagcccattctc 448
Query: 884 tgcaccttcagcaaatacaagcctctcaataagttgcttcgcgcaagcataggaccatct 943
|||||| |||||| | | | ||||||||| | ||||| || || ||||||||||| ||
Sbjct: 447 tgcaccctcagcataaatcaacctctcaatcaactgctttgcacatgcataggaccacct 388
Query: 944 ttgtttcacgattggaccaaaaatacagggcgactcatcttctt 987
|| ||| |||| | ||| ||||| ||||| || |||||||||
Sbjct: 387 ctgcttctcgatagaaccgaaaatgcagggagaggcatcttctt 344
>gb|CV228004.1|CV228004 WS0168.B21_N06 PT-DX-A-7 Populus trichocarpa cDNA clone WS0168_N06
3', mRNA sequence
Length = 873
Score = 73.8 bits (37), Expect = 2e-011
Identities = 130/161 (80%)
Strand = Plus / Plus
Query: 552 acatttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttc 611
||||||||||||||| |||||||||||| || | || ||| || || |||||||||||
Sbjct: 597 acatttgcgtagaccgctgtcatcatttcagcaagctgcctcacagtgacttcattgtta 656
Query: 612 ggattcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcact 671
|| || ||||| || || || || |||||||| | | ||||||||||||||||| |
Sbjct: 657 gggttgccaacgttaaaaatatgaccattggccctggaaggattttcaatcatcaagaga 716
Query: 672 acagcttcgatagcatccttgatgtagacaaaggttctctg 712
||||| ||||| |||||||| || || ||||| ||||||||
Sbjct: 717 acagcctcgatggcatccttaatataaacaaatgttctctg 757
Score = 60.0 bits (30), Expect = 3e-007
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 408 agaggcgtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctc 467
|||| |||||| ||||||||||| || || | |||||||| |||||||| || || |||
Sbjct: 453 agagacgtcttggggttccaaccaagttgtctattgattatggtcatgtctggaattctc 512
Query: 468 ttgtcgctatcatcgtatccttcgccgtagaact 501
||||| ||||| || ||||| || ||||||||||
Sbjct: 513 ttgtcactatcgtcatatccctcaccgtagaact 546
>gb|CV229490.1|CV229490 WS01913.B21_H17 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01913_H17 3', mRNA sequence
Length = 739
Score = 73.8 bits (37), Expect = 2e-011
Identities = 130/161 (80%)
Strand = Plus / Plus
Query: 552 acatttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttc 611
||||||||||||||| |||||||||||| || | || ||| || || |||||||||||
Sbjct: 575 acatttgcgtagaccgctgtcatcatttcagcaagctgcctcacagtgacttcattgtta 634
Query: 612 ggattcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcact 671
|| || ||||| || || || || |||||||| | | ||||||||||||||||| |
Sbjct: 635 gggttgccaacgttaaaaatatgaccattggccctggaaggattttcaatcatcaagaga 694
Query: 672 acagcttcgatagcatccttgatgtagacaaaggttctctg 712
||||| ||||| |||||||| || || ||||| ||||||||
Sbjct: 695 acagcctcgatggcatccttaatataaacaaatgttctctg 735
Score = 60.0 bits (30), Expect = 3e-007
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 408 agaggcgtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctc 467
|||| |||||| ||||||||||| || || | |||||||| |||||||| || || |||
Sbjct: 431 agagacgtcttggggttccaaccaagttgtctattgattatggtcatgtctggaattctc 490
Query: 468 ttgtcgctatcatcgtatccttcgccgtagaact 501
||||| ||||| || ||||| || ||||||||||
Sbjct: 491 ttgtcactatcgtcatatccctcaccgtagaact 524
>gb|CV244899.1|CV244899 WS0255.B21_O21 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0255_O21 3', mRNA sequence
Length = 925
Score = 73.8 bits (37), Expect = 2e-011
Identities = 130/161 (80%)
Strand = Plus / Plus
Query: 552 acatttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttc 611
||||||||||||||| |||||||||||| || | || ||| || || |||||||||||
Sbjct: 597 acatttgcgtagaccgctgtcatcatttcagcaagctgcctcacagtgacttcattgtta 656
Query: 612 ggattcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcact 671
|| || ||||| || || || || |||||||| | | ||||||||||||||||| |
Sbjct: 657 gggttgccaacgttaaaaatatgaccattggccctggaaggattttcaatcatcaagaga 716
Query: 672 acagcttcgatagcatccttgatgtagacaaaggttctctg 712
||||| ||||| |||||||| || || ||||| ||||||||
Sbjct: 717 acagcctcgatggcatccttaatataaacaaatgttctctg 757
Score = 60.0 bits (30), Expect = 3e-007
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 408 agaggcgtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctc 467
|||| |||||| ||||||||||| || || | |||||||| |||||||| || || |||
Sbjct: 453 agagacgtcttggggttccaaccaagttgtctattgattatggtcatgtctggaattctc 512
Query: 468 ttgtcgctatcatcgtatccttcgccgtagaact 501
||||| ||||| || ||||| || ||||||||||
Sbjct: 513 ttgtcactatcgtcatatccctcaccgtagaact 546
>gb|CV273422.1|CV273422 WS01710.B21_O22 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS01710_O22 3', mRNA sequence
Length = 811
Score = 73.8 bits (37), Expect = 2e-011
Identities = 130/161 (80%)
Strand = Plus / Plus
Query: 552 acatttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttc 611
||||||||||||||| |||||||||||| || | || ||| || || |||||||||||
Sbjct: 575 acatttgcgtagaccgctgtcatcatttcagcaagctgcctcacagtgacttcattgtta 634
Query: 612 ggattcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcact 671
|| || ||||| || || || || |||||||| | | ||||||||||||||||| |
Sbjct: 635 gggttgccaacgttaaaaatatgaccattggccctggaaggattttcaatcatcaagaga 694
Query: 672 acagcttcgatagcatccttgatgtagacaaaggttctctg 712
||||| ||||| |||||||| || || ||||| ||||||||
Sbjct: 695 acagcctcgatggcatccttaatataaacaaatgttctctg 735
Score = 60.0 bits (30), Expect = 3e-007
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 408 agaggcgtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctc 467
|||| |||||| ||||||||||| || || | |||||||| |||||||| || || |||
Sbjct: 431 agagacgtcttggggttccaaccaagttgtctattgattatggtcatgtctggaattctc 490
Query: 468 ttgtcgctatcatcgtatccttcgccgtagaact 501
||||| ||||| || ||||| || ||||||||||
Sbjct: 491 ttgtcactatcgtcatatccctcaccgtagaact 524
>gb|CA934118.1|CA934118 MTU3TS.P3.B06 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 656
Score = 71.9 bits (36), Expect = 7e-011
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 414 gtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttgtcg 473
||||| ||||||||||| || || || |||||||| |||||||| || || ||||||||
Sbjct: 319 gtcttggggttccaaccaagttgtttattgattatggtcatgtctggaattctcttgtca 378
Query: 474 ctatcatcgtatccttcgccgtagaact 501
||||| || |||||||| ||||||||||
Sbjct: 379 ctatcgtcatatccttcaccgtagaact 406
Score = 56.0 bits (28), Expect = 4e-006
Identities = 91/112 (81%)
Strand = Plus / Plus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||||||| |||||||||||| || | || |||||| || ||||||||||| ||
Sbjct: 460 tttgcgtagaccgctgtcatcatttcagcaagctgcctaacagtgacttcattgttaggg 519
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatca 666
|| |||||||| || || || || ||||| | |||||| |||||||||||
Sbjct: 520 ttgccaacattaaaaatatgaccgttggccctgtcaggatcttcaatcatca 571
>gb|CV234474.1|CV234474 WS01215.B21.1_B02 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01215_B02 3', mRNA sequence
Length = 821
Score = 71.9 bits (36), Expect = 7e-011
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 414 gtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttgtcg 473
||||| ||||||||||| || || || |||||||| |||||||| || || ||||||||
Sbjct: 541 gtcttggggttccaaccaagttgtttattgattatggtcatgtctggaattctcttgtca 600
Query: 474 ctatcatcgtatccttcgccgtagaact 501
||||| || |||||||| ||||||||||
Sbjct: 601 ctatcgtcatatccttcaccgtagaact 628
Score = 63.9 bits (32), Expect = 2e-008
Identities = 92/112 (82%)
Strand = Plus / Plus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||||||| |||||||||||| || | || |||||| || ||||||||||| ||
Sbjct: 682 tttgcgtagaccgctgtcatcatttcagcaagctgcctaacagtgacttcattgttaggg 741
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatca 666
|| |||||||| || || || || ||||| | ||||||||||||||||||
Sbjct: 742 ttgccaacattaaaaatatgaccgttggccctgtcaggattttcaatcatca 793
>gb|CV237637.1|CV237637 WS0123.B21_I22 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0123_I22 3', mRNA sequence
Length = 668
Score = 71.9 bits (36), Expect = 7e-011
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 414 gtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttgtcg 473
||||| ||||||||||| || || || |||||||| |||||||| || || ||||||||
Sbjct: 541 gtcttggggttccaaccaagttgtttattgattatggtcatgtctggaattctcttgtca 600
Query: 474 ctatcatcgtatccttcgccgtagaact 501
||||| || |||||||| ||||||||||
Sbjct: 601 ctatcgtcatatccttcaccgtagaact 628
>gb|CV253142.1|CV253142 WS0221.B21_A01 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0221_A01 3', mRNA sequence
Length = 710
Score = 71.9 bits (36), Expect = 7e-011
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 414 gtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttgtcg 473
||||| ||||||||||| || || || |||||||| |||||||| || || ||||||||
Sbjct: 530 gtcttggggttccaaccaagttgtttattgattatggtcatgtctggaattctcttgtca 589
Query: 474 ctatcatcgtatccttcgccgtagaact 501
||||| || |||||||| ||||||||||
Sbjct: 590 ctatcgtcatatccttcaccgtagaact 617
Score = 42.1 bits (21), Expect = 0.067
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 555 tttgcgtagacctctgtcatcattt 579
|||||||||||| ||||||||||||
Sbjct: 671 tttgcgtagaccgctgtcatcattt 695
>gb|CV266691.1|CV266691 WS0203.B21_L12 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0203_L12 3', mRNA sequence
Length = 812
Score = 71.9 bits (36), Expect = 7e-011
Identities = 114/140 (81%)
Strand = Plus / Plus
Query: 552 acatttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttc 611
||||||||||||||| |||||||||||| || | || ||| || || |||||||||||
Sbjct: 579 acatttgcgtagaccgctgtcatcatttcagcaagctgcctcacagtgacttcattgtta 638
Query: 612 ggattcccaacattgaagatgtggccattggctcgagcaggattttcaatcatcagcact 671
|| || ||||| || ||||| || |||||||| | | ||||||||||||||||| |
Sbjct: 639 gggttgccaacgttaaagatatgaccattggccctggaaggattttcaatcatcaagaga 698
Query: 672 acagcttcgatagcatcctt 691
||||| ||||| ||||||||
Sbjct: 699 acagcctcgatggcatcctt 718
Score = 60.0 bits (30), Expect = 3e-007
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 408 agaggcgtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctc 467
|||| |||||| ||||||||||| || || | |||||||| |||||||| || || |||
Sbjct: 435 agagacgtcttggggttccaaccaagttgtctattgattatggtcatgtctggaattctc 494
Query: 468 ttgtcgctatcatcgtatccttcgccgtagaact 501
||||| ||||| || ||||| || ||||||||||
Sbjct: 495 ttgtcactatcgtcatatccctcaccgtagaact 528
>gb|BP936939.1|BP936939 BP936939 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-098_J09.r 3', mRNA sequence
Length = 664
Score = 71.9 bits (36), Expect = 7e-011
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 414 gtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttgtcg 473
||||| ||||||||||| || || || |||||||| |||||||| || || ||||||||
Sbjct: 382 gtcttggggttccaaccaagttgtttattgattatggtcatgtctggaattctcttgtca 441
Query: 474 ctatcatcgtatccttcgccgtagaact 501
||||| || |||||||| ||||||||||
Sbjct: 442 ctatcgtcatatccttcaccgtagaact 469
Score = 56.0 bits (28), Expect = 4e-006
Identities = 91/112 (81%)
Strand = Plus / Plus
Query: 555 tttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttcgga 614
|||||||||||| |||||||||||| || | || |||||| || ||||||||||| ||
Sbjct: 523 tttgcgtagaccgctgtcatcatttcagcaagctgcctaacagtgacttcattgttaggg 582
Query: 615 ttcccaacattgaagatgtggccattggctcgagcaggattttcaatcatca 666
|| |||||||| | || || || ||||| | ||||||||||||||||||
Sbjct: 583 ttgccaacattaacaatatgaccgttggccctgtcaggattttcaatcatca 634
>gb|DT525425.1|DT525425 WS02045.C21_F01 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02045_F01 3', mRNA sequence
Length = 696
Score = 69.9 bits (35), Expect = 3e-010
Identities = 95/115 (82%)
Strand = Plus / Plus
Query: 552 acatttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttc 611
||||||||||||||| |||||||||||| || | || ||| || || |||||||||||
Sbjct: 579 acatttgcgtagaccgctgtcatcatttcagcaagctgcctcacagtgacttcattgtta 638
Query: 612 ggattcccaacattgaagatgtggccattggctcgagcaggattttcaatcatca 666
|| || ||||| || ||||| || |||||||| | | |||||||||||||||||
Sbjct: 639 gggttgccaacgttaaagatatgaccattggccctggaaggattttcaatcatca 693
Score = 60.0 bits (30), Expect = 3e-007
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 408 agaggcgtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctc 467
|||| |||||| ||||||||||| || || | |||||||| |||||||| || || |||
Sbjct: 435 agagacgtcttggggttccaaccaagttgtctattgattatggtcatgtctggaattctc 494
Query: 468 ttgtcgctatcatcgtatccttcgccgtagaact 501
||||| ||||| || ||||| || ||||||||||
Sbjct: 495 ttgtcactatcgtcatatccctcaccgtagaact 528
>gb|CX177291.1|CX177291 E05_69-77_09.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 660
Score = 65.9 bits (33), Expect = 5e-009
Identities = 90/109 (82%)
Strand = Plus / Minus
Query: 903 agcctctcaataagttgcttcgcgcaagcataggaccatctttgtttcacgattggacca 962
||||||||||| | |||||| || || ||||| |||||||| || ||| | |||| ||||
Sbjct: 650 agcctctcaatcaattgctttgcacacgcataagaccatctctgcttctcaattgaacca 591
Query: 963 aaaatacagggcgactcatcttctttaagaacataaaattcaggttcct 1011
||||| ||||| || ||||||||||||| |||||| || |||| ||||
Sbjct: 590 aaaatgcagggagaggcatcttctttaagcacataatatgcaggatcct 542
Score = 42.1 bits (21), Expect = 0.067
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 1176 tccgccggcgtgcagatagccgccaggttgatggtcagatcggccatcttgatgagcccc 1235
|||||||| || ||||| || ||||| || || |||||||| | |||||||||||| ||
Sbjct: 377 tccgccggagtacagatcgcagccagatttatcgtcagatctgacatcttgatgaggcct 318
Query: 1236 tcgag 1240
|||||
Sbjct: 317 tcgag 313
>gb|DT473494.1|DT473494 WS01229.BR_M22 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_M22 5', mRNA sequence
Length = 871
Score = 65.9 bits (33), Expect = 5e-009
Identities = 183/233 (78%)
Strand = Plus / Minus
Query: 765 ctgaagcaagccaaaacccgaggcacaccctcgctaggaccatcgacaccaggaatgaaa 824
|||||||| |||| ||||| || |||||||| || || ||||| | || || ||||||
Sbjct: 802 ctgaagcatgccagaaccctgggaacaccctcacttgggccatcaatgccgggtatgaaa 743
Query: 825 tccatccttggcccaatccaattaaaaggtctcacgattgtgaattcaaggccattttct 884
||||| || || |||||||| || || || ||||| || ||||| ||||| ||||| |||
Sbjct: 742 tccattctgggtccaatccagttgaagggcctcacaatggtgaactcaagcccattctct 683
Query: 885 gcaccttcagcaaatacaagcctctcaataagttgcttcgcgcaagcataggaccatctt 944
||||| |||||| | | | ||||||||| | ||||| || || ||||||||||| ||
Sbjct: 682 gcaccctcagcataaatcaacctctcaatcaactgctttgcacatgcataggaccacctc 623
Query: 945 tgtttcacgattggaccaaaaatacagggcgactcatcttctttaagaacata 997
|| ||| |||| | ||| ||||| ||||| || |||||||||| || |||||
Sbjct: 622 tgcttctcgatagaaccgaaaatgcagggagaggcatcttctttgaggacata 570
Score = 42.1 bits (21), Expect = 0.067
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 1379 cttctcgcagaggtgggagccgatgaagccgccggcgccaatcat 1423
|||||| ||||||||||| |||||||| || ||||| || |||||
Sbjct: 188 cttctcacagaggtgggacccgatgaaaccaccggcaccgatcat 144
>gb|CK092655.1|CK092655 G090P60.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G090P60 3', mRNA sequence
Length = 611
Score = 63.9 bits (32), Expect = 2e-008
Identities = 74/88 (84%)
Strand = Plus / Plus
Query: 414 gtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctcttgtcg 473
||||| ||||||||||| ||||| || |||||||| | |||||| || || ||||||||
Sbjct: 493 gtcttggggttccaaccaagctgtttattgattatggccatgtctggaattctcttgtca 552
Query: 474 ctatcatcgtatccttcgccgtagaact 501
||||| || |||||||| ||||| ||||
Sbjct: 553 ctatcgtcatatccttcaccgtaaaact 580
>gb|CV226678.1|CV226678 WS0164.B21_P11 PT-DX-A-7 Populus trichocarpa cDNA clone WS0164_P11
3', mRNA sequence
Length = 560
Score = 61.9 bits (31), Expect = 7e-008
Identities = 94/115 (81%)
Strand = Plus / Plus
Query: 552 acatttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttc 611
||||||||||||||| |||||||||||| || | || ||| || || |||||||||||
Sbjct: 426 acatttgcgtagaccgctgtcatcatttcagcaagctgcctcacagtgacttcattgtta 485
Query: 612 ggattcccaacattgaagatgtggccattggctcgagcaggattttcaatcatca 666
|| || ||||| || || || || |||||||| | | |||||||||||||||||
Sbjct: 486 gggttgccaacgttaaaaatatgaccattggccctggaaggattttcaatcatca 540
Score = 60.0 bits (30), Expect = 3e-007
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 408 agaggcgtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctc 467
|||| |||||| ||||||||||| || || | |||||||| |||||||| || || |||
Sbjct: 282 agagacgtcttggggttccaaccaagttgtctattgattatggtcatgtctggaattctc 341
Query: 468 ttgtcgctatcatcgtatccttcgccgtagaact 501
||||| ||||| || ||||| || ||||||||||
Sbjct: 342 ttgtcactatcgtcatatccctcaccgtagaact 375
>gb|CV230306.1|CV230306 WS01916.B21_B09 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01916_B09 3', mRNA sequence
Length = 560
Score = 61.9 bits (31), Expect = 7e-008
Identities = 94/115 (81%)
Strand = Plus / Plus
Query: 552 acatttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttc 611
||||||||||||||| |||||||||||| || | || ||| || || |||||||||||
Sbjct: 426 acatttgcgtagaccgctgtcatcatttcagcaagctgcctcacagtgacttcattgtta 485
Query: 612 ggattcccaacattgaagatgtggccattggctcgagcaggattttcaatcatca 666
|| || ||||| || || || || |||||||| | | |||||||||||||||||
Sbjct: 486 gggttgccaacgttaaaaatatgaccattggccctggaaggattttcaatcatca 540
Score = 60.0 bits (30), Expect = 3e-007
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 408 agaggcgtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctc 467
|||| |||||| ||||||||||| || || | |||||||| |||||||| || || |||
Sbjct: 282 agagacgtcttggggttccaaccaagttgtctattgattatggtcatgtctggaattctc 341
Query: 468 ttgtcgctatcatcgtatccttcgccgtagaact 501
||||| ||||| || ||||| || ||||||||||
Sbjct: 342 ttgtcactatcgtcatatccctcaccgtagaact 375
>gb|CV255749.1|CV255749 WS02414.B21_P04 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02414_P04 3', mRNA sequence
Length = 727
Score = 61.9 bits (31), Expect = 7e-008
Identities = 94/115 (81%)
Strand = Plus / Plus
Query: 552 acatttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttc 611
||||||||||||||| |||||||||||| || | || ||| || || |||||||||||
Sbjct: 601 acatttgcgtagaccgctgtcatcatttcagcaagctgcctcacagtgacttcattgtta 660
Query: 612 ggattcccaacattgaagatgtggccattggctcgagcaggattttcaatcatca 666
|| || ||||| || || || || |||||||| | | |||||||||||||||||
Sbjct: 661 gggttgccaacgttaaaaatatgaccattggccctggaaggattttcaatcatca 715
Score = 60.0 bits (30), Expect = 3e-007
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 408 agaggcgtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctc 467
|||| |||||| ||||||||||| || || | |||||||| |||||||| || || |||
Sbjct: 457 agagacgtcttggggttccaaccaagttgtctattgattatggtcatgtctggaattctc 516
Query: 468 ttgtcgctatcatcgtatccttcgccgtagaact 501
||||| ||||| || ||||| || ||||||||||
Sbjct: 517 ttgtcactatcgtcatatccctcaccgtagaact 550
>gb|CV264943.1|CV264943 WS02025.B21_O15 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02025_O15 3', mRNA sequence
Length = 711
Score = 61.9 bits (31), Expect = 7e-008
Identities = 94/115 (81%)
Strand = Plus / Plus
Query: 552 acatttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttc 611
||||||||||||||| |||||||||||| || | || ||| || || |||||||||||
Sbjct: 597 acatttgcgtagaccgctgtcatcatttcagcaagctgcctcacagtgacttcattgtta 656
Query: 612 ggattcccaacattgaagatgtggccattggctcgagcaggattttcaatcatca 666
|| || | ||| || ||||| || |||||||| | | |||||||||||||||||
Sbjct: 657 gggttgctaacgttaaagatatgaccattggccctggaaggattttcaatcatca 711
Score = 60.0 bits (30), Expect = 3e-007
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 408 agaggcgtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctc 467
|||| |||||| ||||||||||| || || | |||||||| |||||||| || || |||
Sbjct: 453 agagacgtcttggggttccaaccaagttgtctattgattatggtcatgtctggaattctc 512
Query: 468 ttgtcgctatcatcgtatccttcgccgtagaact 501
||||| ||||| || ||||| || ||||||||||
Sbjct: 513 ttgtcactatcgtcatatccctcaccgtagaact 546
>gb|CX171047.1|CX171047 F10_69-24_12.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 650
Score = 61.9 bits (31), Expect = 7e-008
Identities = 103/127 (81%)
Strand = Plus / Minus
Query: 885 gcaccttcagcaaatacaagcctctcaataagttgcttcgcgcaagcataggaccatctt 944
||||| |||||| | || ||||||||||| | |||||| || || ||||| ||||||||
Sbjct: 650 gcaccctcagcataaaccagcctctcaatcaattgctttgcacacgcataagaccatctc 591
Query: 945 tgtttcacgattggaccaaaaatacagggcgactcatcttctttaagaacataaaattca 1004
|| ||| | || | ||||||||| ||||| || ||||||||||||| |||||| || ||
Sbjct: 590 tgcttctcaatggaaccaaaaatgcagggagaggcatcttctttaagcacataatatgca 531
Query: 1005 ggttcct 1011
|| ||||
Sbjct: 530 ggatcct 524
Score = 42.1 bits (21), Expect = 0.067
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 1176 tccgccggcgtgcagatagccgccaggttgatggtcagatcggccatcttgatgagcccc 1235
|||||||| || ||||| || ||||| || || |||||||| | |||||||||||| ||
Sbjct: 359 tccgccggagtacagatcgcagccagatttatcgtcagatctgacatcttgatgaggcct 300
Query: 1236 tcgag 1240
|||||
Sbjct: 299 tcgag 295
>gb|BP934865.1|BP934865 BP934865 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-070_G21.r 3', mRNA sequence
Length = 621
Score = 60.0 bits (30), Expect = 3e-007
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 408 agaggcgtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctc 467
|||| |||||| ||||||||||| || || | |||||||| |||||||| || || |||
Sbjct: 405 agagacgtcttggggttccaaccaagttgtctattgattatggtcatgtctggaattctc 464
Query: 468 ttgtcgctatcatcgtatccttcgccgtagaact 501
||||| ||||| || ||||| || ||||||||||
Sbjct: 465 ttgtcactatcgtcatatccctcaccgtagaact 498
Score = 40.1 bits (20), Expect = 0.26
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 552 acatttgcgtagacctctgtcatcattt 579
||||||||||||| | ||||||||||||
Sbjct: 549 acatttgcgtagaacgctgtcatcattt 576
>gb|BP935681.1|BP935681 BP935681 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-079_N01.r 3', mRNA sequence
Length = 622
Score = 60.0 bits (30), Expect = 3e-007
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 408 agaggcgtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctc 467
|||| |||||| ||||||||||| || || | |||||||| |||||||| || || |||
Sbjct: 403 agagacgtcttggggttccaaccaagttgtctattgattatggtcatgtctggaattctc 462
Query: 468 ttgtcgctatcatcgtatccttcgccgtagaact 501
||||| ||||| || ||||| || ||||||||||
Sbjct: 463 ttgtcactatcgtcatatccctcaccgtagaact 496
Score = 48.1 bits (24), Expect = 0.001
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 552 acatttgcgtagacctctgtcatcattt 579
||||||||||||||| ||||||||||||
Sbjct: 547 acatttgcgtagaccgctgtcatcattt 574
>gb|DT469785.1|DT469785 WS01918.C21_O04 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01918_O04 3', mRNA sequence
Length = 675
Score = 60.0 bits (30), Expect = 3e-007
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 408 agaggcgtctttgggttccaacctagctgcttgttgattatagtcatgtcggggatcctc 467
|||| |||||| ||||||||||| || || | |||||||| |||||||| || || |||
Sbjct: 433 agagacgtcttggggttccaaccaagttgtctattgattatggtcatgtctggaattctc 492
Query: 468 ttgtcgctatcatcgtatccttcgccgtagaact 501
||||| ||||| || ||||| || ||||||||||
Sbjct: 493 ttgtcactatcgtcatatccctcaccgtagaact 526
Score = 48.1 bits (24), Expect = 0.001
Identities = 75/92 (81%)
Strand = Plus / Plus
Query: 552 acatttgcgtagacctctgtcatcatttgggccaactccctaacggtaacttcattgttc 611
||||||||||||||| |||||||||||| || | || ||| || || |||||||||||
Sbjct: 577 acatttgcgtagaccgctgtcatcatttcagcaagctgcctcacagtgacttcattgtta 636
Query: 612 ggattcccaacattgaagatgtggccattggc 643
|| || ||||| || || || || ||||||||
Sbjct: 637 gggttgccaacgttaaaaatatgaccattggc 668
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 163,299
Number of Sequences: 369679
Number of extensions: 163299
Number of successful extensions: 44644
Number of sequences better than 0.5: 75
Number of HSP's better than 0.5 without gapping: 72
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 44447
Number of HSP's gapped (non-prelim): 148
length of query: 1644
length of database: 203,408,664
effective HSP length: 19
effective length of query: 1625
effective length of database: 196,384,763
effective search space: 319125239875
effective search space used: 319125239875
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)