BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161295.2.1
(1475 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT476310.1|DT476310 WS01229.B21_B21 PT-GT-FL-A-3 Populus... 327 7e-088
gb|DT487290.1|DT487290 WS02533.B21_E19 PT-MB-N-A-15 Populus... 323 1e-086
gb|CN550551.1|CN550551 GQ0242.B3_J13 GQ024 Populus trichoca... 297 6e-079
gb|CV237262.1|CV237262 WS01227.B21.1_C10 PT-GT-FL-A-3 Popul... 293 1e-077
gb|CA928550.1|CA928550 MTU6TR.P4.A02 Aspen root cDNA Librar... 274 9e-072
gb|DT489199.1|DT489199 WS02538.B21_J01 PT-MB-N-A-15 Populus... 272 4e-071
gb|BI130663.1|BI130663 G108P95Y Populus cambium cDNA librar... 250 1e-064
gb|CA928802.1|CA928802 MTU6TR.P7.A07 Aspen root cDNA Librar... 248 5e-064
gb|CV247264.1|CV247264 WS01117.B21_J07 PT-P-FL-A-2 Populus ... 232 3e-059
gb|CK098211.1|CK098211 A007P62.5pR Hybrid aspen plasmid lib... 226 2e-057
gb|BU825809.1|BU825809 UK113TD01 Populus apical shoot cDNA ... 220 1e-055
gb|BI137576.1|BI137576 F088P66Y Populus flower cDNA library... 212 3e-053
gb|CV242276.1|CV242276 WS02514.B21.1_J24 PT-MB-N-A-15 Popul... 210 1e-052
gb|BI137782.1|BI137782 F093P42Y Populus flower cDNA library... 204 7e-051
gb|DT494608.1|DT494608 WS01118.BR.1_O19 PT-P-FL-A-2 Populus... 202 3e-050
gb|DT519855.1|DT519855 WS02443.B21_N22 PTxD-ICC-N-A-14 Popu... 196 2e-048
gb|CV233669.1|CV233669 WS01211.B21_O21 PT-GT-FL-A-3 Populus... 190 1e-046
gb|CV247664.1|CV247664 WS01118.B21_O19 PT-P-FL-A-2 Populus ... 182 3e-044
gb|BI119774.1|BI119774 F005P05Y Populus flower cDNA library... 178 4e-043
gb|BI135440.1|BI135440 F051P45Y Populus flower cDNA library... 168 4e-040
gb|CX653431.1|CX653431 PO02001G11 Poplar SC cDNA library Po... 163 2e-038
gb|BI129436.1|BI129436 G090P66Y Populus cambium cDNA librar... 157 1e-036
gb|BI130649.1|BI130649 G108P73Y Populus cambium cDNA librar... 155 6e-036
gb|DT523430.1|DT523430 WS02039.B21_K21 PTxN-IB-N-A-11 Popul... 143 2e-032
gb|CN522526.1|CN522526 GQ0121.B3_F24 GQ012 Populus trichoca... 129 3e-028
gb|CV236293.1|CV236293 WS01223.B21_J13 PT-GT-FL-A-3 Populus... 123 2e-026
gb|DN493626.1|DN493626 G073P36.5pR Populus tension wood cDN... 119 3e-025
gb|CK116642.1|CK116642 B015P14 Hybrid aspen plasmid library... 115 5e-024
gb|DT499631.1|DT499631 WS0118.BR_N17 PT-P-FL-A-2 Populus tr... 115 5e-024
gb|BI127683.1|BI127683 G064P33Y Populus cambium cDNA librar... 113 2e-023
gb|BU834862.1|BU834862 T066F04 Populus apical shoot cDNA li... 111 8e-023
gb|BU884377.1|BU884377 R009G11 Populus root cDNA library Po... 107 1e-021
gb|CV246813.1|CV246813 WS01116.B21_A16 PT-P-FL-A-2 Populus ... 105 5e-021
gb|CK091807.1|CK091807 F127P19.3pR Populus flower cDNA libr... 103 2e-020
gb|CV234257.1|CV234257 WS01214.B21_D24 PT-GT-FL-A-3 Populus... 103 2e-020
gb|AI161839.1|AI161839 A007P62U Hybrid aspen plasmid librar... 96 5e-018
gb|CF235228.1|CF235228 PtaJXT0020C7C0705 Poplar cDNA librar... 92 7e-017
gb|CX653925.1|CX653925 PO02009F04 Poplar SC cDNA library Po... 92 7e-017
gb|BI129897.1|BI129897 G097P09Y Populus cambium cDNA librar... 84 2e-014
gb|DT473267.1|DT473267 WS01229.BR_B21 PT-GT-FL-A-3 Populus ... 76 4e-012
gb|CV251224.1|CV251224 WS0116.B21_E05 PT-P-FL-A-2 Populus t... 74 2e-011
gb|DT492733.1|DT492733 WS02552.C21_C13 PT-MB-N-A-15 Populus... 74 2e-011
gb|BI132071.1|BI132071 G130P62Y Populus cambium cDNA librar... 72 7e-011
gb|CK088221.1|CK088221 A044P24.3pR Hybrid aspen plasmid lib... 60 3e-007
gb|CF232400.1|CF232400 PtaJXO0010A5H0816 Poplar cDNA librar... 54 2e-005
gb|CV230060.1|CV230060 WS01915.B21_E22 PT-DX-N-A-10 Populus... 54 2e-005
gb|CV241062.1|CV241062 WS02511.B21_B22 PT-MB-N-A-15 Populus... 54 2e-005
gb|DT469792.1|DT469792 WS01918.C21_O11 PT-DX-N-A-10 Populus... 54 2e-005
gb|CA925513.1|CA925513 MTU7TL.P2.D03 Aspen leaf cDNA Librar... 52 6e-005
gb|CV277427.1|CV277427 WS0143.B21_I24 PTxD-IL-A-5 Populus t... 52 6e-005
gb|BI127468.1|BI127468 G061P13Y Populus cambium cDNA librar... 48 0.001
gb|DN484314.1|DN484314 G116P87.3pR Populus tension wood cDN... 44 0.015
gb|AI165131.1|AI165131 A076P64U Hybrid aspen plasmid librar... 42 0.060
gb|CN549824.1|CN549824 GQ0244.B3_B01 GQ024 Populus trichoca... 42 0.060
gb|DT494155.1|DT494155 WS01117.BR_J07 PT-P-FL-A-2 Populus t... 42 0.060
gb|CF229028.1|CF229028 PtaXM0020C6C0606 Poplar cDNA library... 40 0.24
gb|BI069315.1|BI069315 C035P28U Populus strain T89 leaves P... 38 0.93
gb|CK090406.1|CK090406 F003P25.3pR Populus flower cDNA libr... 38 0.93
gb|CV230664.1|CV230664 WS0192.B21_E05 PT-DX-N-A-10 Populus ... 38 0.93
gb|CX168862.1|CX168862 D09_69-79_07.ab1 leaf inoculated wit... 38 0.93
gb|CX186838.1|CX186838 A07_45-65_01.ab1 leaf inoculated wit... 38 0.93
gb|BU825721.1|BU825721 UK112TC11 Populus apical shoot cDNA ... 36 3.7
gb|BU875894.1|BU875894 V012G10 Populus flower cDNA library ... 36 3.7
gb|BU877541.1|BU877541 V036A05 Populus flower cDNA library ... 36 3.7
gb|CA820784.1|CA820784 F03C04 two-month-old leaves from clo... 36 3.7
gb|CA820877.1|CA820877 F05B10 two-month-old leaves from clo... 36 3.7
gb|CA824519.1|CA824519 R43H12 two-month-old roots from clon... 36 3.7
gb|CK099674.1|CK099674 A080P20.5pR Hybrid aspen plasmid lib... 36 3.7
gb|CK114391.1|CK114391 X020H08 Populus wood cDNA library Po... 36 3.7
gb|CK114775.1|CK114775 X067G08 Populus wood cDNA library Po... 36 3.7
gb|CK114869.1|CK114869 X078H10 Populus wood cDNA library Po... 36 3.7
gb|CN518735.1|CN518735 GQ0102.B3_C05 GQ010 Populus trichoca... 36 3.7
gb|AJ772039.1|AJ772039 AJ772039 Populus euphratica root 3-6... 36 3.7
gb|CV235467.1|CV235467 WS0122.B21_E07 PT-GT-FL-A-3 Populus ... 36 3.7
gb|CV246788.1|CV246788 WS01111.B21_P05 PT-P-FL-A-2 Populus ... 36 3.7
gb|CV247339.1|CV247339 WS01117.B21_N11 PT-P-FL-A-2 Populus ... 36 3.7
gb|CV248186.1|CV248186 WS0112.B21_L14 PT-P-FL-A-2 Populus t... 36 3.7
gb|CV249026.1|CV249026 WS01122.B21_M14 PT-P-FL-A-2 Populus ... 36 3.7
gb|CV254223.1|CV254223 WS0224.B21_H05 PTxD-ICC-A-12 Populus... 36 3.7
gb|CV254772.1|CV254772 WS02411.B21_C06 PTxD-ICC-N-A-14 Popu... 36 3.7
gb|CV256750.1|CV256750 WS0244.B21_L07 PTxD-ICC-N-A-14 Popul... 36 3.7
gb|CV266169.1|CV266169 WS02029.B21_E16 PTxN-IB-N-A-11 Popul... 36 3.7
gb|DN491674.1|DN491674 V012G10.3pR Populus male catkins cDN... 36 3.7
gb|DN501653.1|DN501653 V012G10.5pR Populus male catkins cDN... 36 3.7
gb|DT471843.1|DT471843 WS0122.BR_E07 PT-GT-FL-A-3 Populus t... 36 3.7
gb|DT488121.1|DT488121 WS02535.B21_J02 PT-MB-N-A-15 Populus... 36 3.7
gb|DT489047.1|DT489047 WS02538.B21_C12 PT-MB-N-A-15 Populus... 36 3.7
gb|DT491092.1|DT491092 WS02546.C21.1_M16 PT-MB-N-A-15 Popul... 36 3.7
gb|DT494239.1|DT494239 WS01117.BR_N11 PT-P-FL-A-2 Populus t... 36 3.7
gb|DT495210.1|DT495210 WS0112.BR_L14 PT-P-FL-A-2 Populus tr... 36 3.7
gb|DT496221.1|DT496221 WS01122.BR_M14 PT-P-FL-A-2 Populus t... 36 3.7
gb|AC149428.1| Populus trichocarpa clone Pop1-080J15, compl... 36 3.7
gb|AC149479.1| Populus trichocarpa clone Pop1-017N13, compl... 36 3.7
gb|AC149541.1| Populus trichocarpa clone Pop1-12C14, comple... 36 3.7
>gb|DT476310.1|DT476310 WS01229.B21_B21 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_B21 3', mRNA sequence
Length = 922
Score = 327 bits (165), Expect = 7e-088
Identities = 381/453 (84%)
Strand = Plus / Plus
Query: 505 gaactcgatccgtgcgttggggtcgatggtgtcctggacaaccttggcaagctcaagcat 564
|||||| |||| ||| || || |||||||| |||||||| |||| ||||||||||||||
Sbjct: 446 gaactctatccttgcatttggatcgatggtttcctggaccacctgagcaagctcaagcat 505
Query: 565 ggtgaactcgccagggttacccaggttgaatggccccacatgctcgccttccatcagctt 624
|||||| || || || || || || ||||| ||||| ||||| || |||||||| ||
Sbjct: 506 ggtgaattcacccggattcccaagattgaaaggccctacatgttctccttccataaggcg 565
Query: 625 catcagaccctcaaccagatcagaaacatattggaaactcctggtttgctttccatcacc 684
|||||| |||||||||| |||||||||| |||| |||||||| || || || ||||||||
Sbjct: 566 catcaggccctcaaccaaatcagaaacaaattgaaaactcctagtctgtttcccatcacc 625
Query: 685 ataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttactgacaacacggcc 744
|||||| |||| || |||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 626 ataaacagtcataggttccttcctcagtgcctgagcaacaaaattactaacaacacggcc 685
Query: 745 atcgtcaatgcacatgcgagggccatatgtattgaagatacgtgcgatcctaacctcaag 804
||| ||||||||||| || || ||||| ||||||||||| | || ||||| |||||||
Sbjct: 686 atcatcaatgcacatccggggtccataagtattgaagattctagcaatcctgacctcaac 745
Query: 805 gttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgta 864
|||||||||||| || ||||| | ||| || || ||||| | ||| || ||||||||
Sbjct: 746 accggcaccacggtgatagtccatagccaatgtctctgctgttctctttccttcatcgta 805
Query: 865 acagctcctgacaccgatgggattgacattgccccagtaagtctccacctgcgggtgctg 924
||| |||||||||||||||||||| || ||||||||||||||||| ||||| || |||||
Sbjct: 806 acaactcctgacaccgatgggattaacgttgccccagtaagtctcgacctgaggatgctg 865
Query: 925 gagaggatcaccatagacctcactggtactggt 957
|||||||||||||| ||||| |||||||||||
Sbjct: 866 tagaggatcaccataaacctcgctggtactggt 898
>gb|DT487290.1|DT487290 WS02533.B21_E19 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02533_E19 3', mRNA sequence
Length = 912
Score = 323 bits (163), Expect = 1e-086
Identities = 379/451 (84%)
Strand = Plus / Plus
Query: 505 gaactcgatccgtgcgttggggtcgatggtgtcctggacaaccttggcaagctcaagcat 564
|||||| |||| ||| || || |||||||| |||||||| |||| ||||||||||||||
Sbjct: 462 gaactctatccttgcatttggatcgatggtttcctggaccacctgagcaagctcaagcat 521
Query: 565 ggtgaactcgccagggttacccaggttgaatggccccacatgctcgccttccatcagctt 624
|||||| || || || || || || ||||| ||||| ||||| || |||||||| ||
Sbjct: 522 ggtgaattcacccggattcccaagattgaaaggccctacatgttctccttccataaggcg 581
Query: 625 catcagaccctcaaccagatcagaaacatattggaaactcctggtttgctttccatcacc 684
|||||| |||||||||| |||||||||| |||| |||||||| || || || ||||||||
Sbjct: 582 catcaggccctcaaccaaatcagaaacaaattgaaaactcctagtctgtttcccatcacc 641
Query: 685 ataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttactgacaacacggcc 744
|||||| |||| || |||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 642 ataaacagtcataggttccttcctcagtgcctgagcaacaaaattactaacaacacggcc 701
Query: 745 atcgtcaatgcacatgcgagggccatatgtattgaagatacgtgcgatcctaacctcaag 804
||| ||||||||||| || || ||||| ||||||||||| | || ||||| |||||||
Sbjct: 702 atcatcaatgcacatccggggtccataagtattgaagattctagcaatcctgacctcaac 761
Query: 805 gttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgta 864
|||||||||||| || ||||| | ||| || || ||||| | ||| || ||||||||
Sbjct: 762 accggcaccacggtgatagtccatagccaatgtctctgctgttctctttccttcatcgta 821
Query: 865 acagctcctgacaccgatgggattgacattgccccagtaagtctccacctgcgggtgctg 924
||| |||||||||||||||||||| || ||||||||||||||||| ||||| || |||||
Sbjct: 822 acaactcctgacaccgatgggattaacgttgccccagtaagtctcgacctgaggatgctg 881
Query: 925 gagaggatcaccatagacctcactggtactg 955
|||||||||||||| ||||| |||||||||
Sbjct: 882 tagaggatcaccataaacctcgctggtactg 912
>gb|CN550551.1|CN550551 GQ0242.B3_J13 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0242_J13 5', mRNA sequence
Length = 709
Score = 297 bits (150), Expect = 6e-079
Identities = 363/434 (83%)
Strand = Plus / Minus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggtta 583
||||| ||||| |||||||| |||| ||||||||| ||||||||||| || || || ||
Sbjct: 460 gggtctatggtttcctggaccacctgggcaagctcgagcatggtgaattcacccggattt 401
Query: 584 cccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccaga 643
|| || ||||| ||||| ||||| || |||||||| || ||||||||||||||||| |
Sbjct: 400 ccaagattgaaaggccctacatgttctccttccataagacgcatcagaccctcaaccaaa 341
Query: 644 tcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctcc 703
||||||||| |||| |||||||| || || || |||||||||||||| |||| ||||||
Sbjct: 340 tcagaaacaaattgaaaactccttgtctgtttcccatcaccataaacagtcataggctcc 281
Query: 704 ttcctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcga 763
||||| ||||||||||||||||| ||||| |||||||||||||| || |||||||| |||
Sbjct: 280 ttccttagtgcctgagcaacaaaattactaacaacacggccatcatctatgcacattcga 221
Query: 764 gggccatatgtattgaagatacgtgcgatcctaacctcaaggttggcaccacggtggtaa 823
|| || || |||||||| || | || ||||||||||| | ||||| ||||| ||
Sbjct: 220 ggtccgtaagtattgaaaattctagcaatcctaacctctacaccagcacctcggtgatag 161
Query: 824 tccatggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcctgacaccgatg 883
||||| ||||| || ||||| || | ||| || ||||||||||| |||||||||||||||
Sbjct: 160 tccatagtcaatgtctcagcagttctctttccttcatcgtaacaactcctgacaccgatg 101
Query: 884 ggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatagacc 943
||||| || ||||||||||||||||| ||||| || ||||| | |||||||||||| |||
Sbjct: 100 ggattaacgttgccccagtaagtctcgacctgaggatgctgtaaaggatcaccataaacc 41
Query: 944 tcactggtactggt 957
|| |||||||||||
Sbjct: 40 tcgctggtactggt 27
>gb|CV237262.1|CV237262 WS01227.B21.1_C10 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01227_C10 3', mRNA sequence
Length = 895
Score = 293 bits (148), Expect = 1e-077
Identities = 358/428 (83%)
Strand = Plus / Plus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggtta 583
||||| ||||| |||||||| |||| ||||||||| ||||||||||| || || || ||
Sbjct: 468 gggtcaatggtttcctggaccacctgggcaagctcgagcatggtgaattcacccggattt 527
Query: 584 cccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccaga 643
|| || ||||| ||||| ||||| || |||||||| || ||||||||||||||||| |
Sbjct: 528 ccaagattgaaaggccctacatgttctccttccataaggcgcatcagaccctcaaccaaa 587
Query: 644 tcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctcc 703
||||||||| |||| |||||||| || || || |||||||||||||| |||| ||||||
Sbjct: 588 tcagaaacaaattgaaaactccttgtctgtttcccatcaccataaacagtcataggctcc 647
Query: 704 ttcctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcga 763
||||| ||||||||||||||||| ||||| |||||||||||||| || |||||||| |||
Sbjct: 648 ttccttagtgcctgagcaacaaaattactaacaacacggccatcatctatgcacattcga 707
Query: 764 gggccatatgtattgaagatacgtgcgatcctaacctcaaggttggcaccacggtggtaa 823
|| ||||| |||||||| || | || ||||||||||| | ||||| ||||| ||
Sbjct: 708 ggtccataagtattgaaaattctagcaatcctaacctctacaccagcacctcggtgatag 767
Query: 824 tccatggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcctgacaccgatg 883
||||| ||||| || ||||| || | ||| || ||||||||||| |||||||||||||||
Sbjct: 768 tccatagtcaatgtctcagcagttctctttccttcatcgtaacaactcctgacaccgatg 827
Query: 884 ggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatagacc 943
||||| || ||||||||||||||||| ||||| || ||||| | |||||||||||| |||
Sbjct: 828 ggattaacgttgccccagtaagtctcgacctgaggatgctgtaaaggatcaccataaacc 887
Query: 944 tcactggt 951
|| |||||
Sbjct: 888 tcgctggt 895
>gb|CA928550.1|CA928550 MTU6TR.P4.A02 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 599
Score = 274 bits (138), Expect = 9e-072
Identities = 351/422 (83%)
Strand = Plus / Minus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggtta 583
||||| ||||| |||||||| ||||| |||||||| ||||||||||| || || || ||
Sbjct: 425 gggtcaatggtttcctggaccaccttagcaagctcgagcatggtgaattcacctggattt 366
Query: 584 cccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccaga 643
|| || ||||| || || ||||| || |||||||| || ||||||||||||||||| |
Sbjct: 365 ccaagattgaaaggtcctacatgttctccttccataagacgcatcagaccctcaaccaaa 306
Query: 644 tcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctcc 703
|||||| || |||| |||||||| || || || |||||||||||||| |||| ||||||
Sbjct: 305 tcagaaccaaattgaaaactccttgtctgtttcccatcaccataaacagtcataggctcc 246
Query: 704 ttcctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcga 763
||||| ||||||||||||||||| ||||| |||||||||||||| || |||||||| |||
Sbjct: 245 ttccttagtgcctgagcaacaaaattactaacaacacggccatcatctatgcacattcga 186
Query: 764 gggccatatgtattgaagatacgtgcgatcctaacctcaaggttggcaccacggtggtaa 823
|| ||||| |||||||| || | || ||||||||||| | ||||| ||||| ||
Sbjct: 185 ggtccataagtattgaaaattctggcaatcctaacctctacaccagcacctcggtgatag 126
Query: 824 tccatggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcctgacaccgatg 883
||||| ||||| || ||||| || | ||| || ||||||||||| |||||||||||||||
Sbjct: 125 tccatagtcaatgtctcagcagttctctttccttcatcgtaacaactcctgacaccgatg 66
Query: 884 ggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccatagacc 943
|||||||| || |||||||||||||| ||||| || ||||| | |||||||||||| |||
Sbjct: 65 ggattgacgtttccccagtaagtctcgacctgaggatgctgtaaaggatcaccataaacc 6
Query: 944 tc 945
||
Sbjct: 5 tc 4
>gb|DT489199.1|DT489199 WS02538.B21_J01 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02538_J01 3', mRNA sequence
Length = 875
Score = 272 bits (137), Expect = 4e-071
Identities = 335/401 (83%)
Strand = Plus / Plus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggtta 583
||||| ||||| |||||||| |||| ||||||||| ||||||||||| || || || ||
Sbjct: 470 gggtcaatggtttcctggaccacctgggcaagctcgagcatggtgaattcacccggattt 529
Query: 584 cccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccaga 643
|| || ||||| ||||| ||||| || |||||||| || ||||||||||||||||| |
Sbjct: 530 ccaagattgaaaggccctacatgttctccttccataaggcgcatcagaccctcaaccaaa 589
Query: 644 tcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctcc 703
||||||||| |||| |||||||| || || || |||||||||||||| |||| ||||||
Sbjct: 590 tcagaaacaaattgaaaactccttgtctgtttcccatcaccataaacagtcataggctcc 649
Query: 704 ttcctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcga 763
||||| ||||||||||||||||| ||||| |||||||||||||| || |||||||| |||
Sbjct: 650 ttccttagtgcctgagcaacaaaattactaacaacacggccatcatctatgcacattcga 709
Query: 764 gggccatatgtattgaagatacgtgcgatcctaacctcaaggttggcaccacggtggtaa 823
|| ||||| |||||||| || | || ||||||||||| | ||||| ||||| ||
Sbjct: 710 ggtccataagtattgaaaattctagcaatcctaacctctacaccagcacctcggtgatag 769
Query: 824 tccatggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcctgacaccgatg 883
||||| ||||| || ||||| || | ||| || ||||||||||| |||||||||||||||
Sbjct: 770 tccatagtcaatgtctcagcagttctctttccttcatcgtaacaactcctgacaccgatg 829
Query: 884 ggattgacattgccccagtaagtctccacctgcgggtgctg 924
||||| || ||||||||||||||||| ||||| || |||||
Sbjct: 830 ggattaacgttgccccagtaagtctcgacctgaggatgctg 870
>gb|BI130663.1|BI130663 G108P95Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 455
Score = 250 bits (126), Expect = 1e-064
Identities = 283/334 (84%), Gaps = 1/334 (0%)
Strand = Plus / Minus
Query: 625 catcagaccctcaaccagatcagaaacatattggaaa-ctcctggtttgctttccatcac 683
||||||||||||||||| |||||||||| ||| |||| ||||| || || || |||||||
Sbjct: 441 catcagaccctcaaccaaatcagaaacaaatttgaaaactccttgtctgtttcccatcac 382
Query: 684 cataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttactgacaacacggc 743
||||||| |||| ||||||||||| ||||||||||||||||| ||||| ||||||||||
Sbjct: 381 cataaacagtcataggctccttccttagtgcctgagcaacaaaattactaacaacacggc 322
Query: 744 catcgtcaatgcacatgcgagggccatatgtattgaagatacgtgcgatcctaacctcaa 803
|||| || |||||||| ||||| ||||| |||||||| || | || ||||||||||| |
Sbjct: 321 catcatctatgcacattcgaggtccataagtattgaaaattctggcaatcctaacctcta 262
Query: 804 ggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgt 863
||||| ||||| || ||||| ||||| || ||||| || | ||| || |||||||
Sbjct: 261 caccagcacctcggtgatagtccatagtcaatgtctcagcagttctctttccttcatcgt 202
Query: 864 aacagctcctgacaccgatgggattgacattgccccagtaagtctccacctgcgggtgct 923
|||| |||||||||||||||||||| || || |||||||||||||| ||||| || ||||
Sbjct: 201 aacaactcctgacaccgatgggattaacgtttccccagtaagtctcgacctgaggatgct 142
Query: 924 ggagaggatcaccatagacctcactggtactggt 957
| |||||||||||||| ||||| |||||||||||
Sbjct: 141 gtagaggatcaccataaacctcgctggtactggt 108
>gb|CA928802.1|CA928802 MTU6TR.P7.A07 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 599
Score = 248 bits (125), Expect = 5e-064
Identities = 343/416 (82%)
Strand = Plus / Minus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggtta 583
||||| ||||| |||||||| ||||| |||||||| ||||||||||| || || || ||
Sbjct: 425 gggtcaatggtttcctggaccaccttagcaagctcgagcatggtgaattcacctggattt 366
Query: 584 cccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccaga 643
|| || ||||| ||||| |||| || | |||||| || ||||||||||||||||| |
Sbjct: 365 ccaagattgaaaggccctgcatgttctcattccataagacgcatcagaccctcaaccaaa 306
Query: 644 tcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctcc 703
||||||||| |||| |||||||| || || || |||||||||||||| |||| ||||||
Sbjct: 305 tcagaaacaaattgaaaactccttgtctgtttcccatcaccataaacagtcataggctcc 246
Query: 704 ttcctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcga 763
||||| |||||| |||||||||| ||||| |||||||||||||| || |||||||| |||
Sbjct: 245 ttccttagtgcccgagcaacaaaattactaacaacacggccatcatctatgcacattcga 186
Query: 764 gggccatatgtattgaagatacgtgcgatcctaacctcaaggttggcaccacggtggtaa 823
|| ||||| |||||||| || | || ||||||||||| | || | ||||| ||
Sbjct: 185 ggtccataagtattgaaaattctggcaatcctaacctctacaccagcncatcggtgatag 126
Query: 824 tccatggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcctgacaccgatg 883
||||| ||||| || ||||| || | ||| || ||||||||||| |||||||||||||||
Sbjct: 125 tccatagtcaatgtctcagcagttctctttccttcatcgtaacaactcctgacaccgatg 66
Query: 884 ggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccata 939
|||||||| || |||||||||||||| ||||| || ||||| | ||||||||||||
Sbjct: 65 ggattgacgtttccccagtaagtctcgacctgaggatgctgtaaaggatcaccata 10
>gb|CV247264.1|CV247264 WS01117.B21_J07 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01117_J07 3', mRNA sequence
Length = 902
Score = 232 bits (117), Expect = 3e-059
Identities = 303/365 (83%)
Strand = Plus / Plus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggtta 583
||||| ||||| |||||||| |||| ||||||||| ||||||||||| || || || ||
Sbjct: 531 gggtcaatggtttcctggaccacctgggcaagctcgagcatggtgaattcacccggattt 590
Query: 584 cccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccaga 643
|| || ||||| ||||| ||| | || |||||||| || ||||||||||||||||| |
Sbjct: 591 ccaagattgaaaggccctacacgttctccttccataaggcgcatcagaccctcaaccaaa 650
Query: 644 tcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctcc 703
||||||||| |||| |||||||| || || || |||||||||||||| |||| ||||||
Sbjct: 651 tcagaaacaaattgaaaactccttgtctgtttcccatcaccataaacagtcataggctcc 710
Query: 704 ttcctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcga 763
||||| ||||||||||||||||| ||||| |||||||||||||| || |||||||| |||
Sbjct: 711 ttccttagtgcctgagcaacaaaattactaacaacacggccatcatctatgcacattcga 770
Query: 764 gggccatatgtattgaagatacgtgcgatcctaacctcaaggttggcaccacggtggtaa 823
|| ||||| |||||||| || | || ||||||||||| | ||||| ||||| ||
Sbjct: 771 ggtccataagtattgaaaattctagcaatcctaacctctacaccagcacctcggtgatag 830
Query: 824 tccatggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcctgacaccgatg 883
||||| ||||| || ||||| || | ||| || ||||||||||| |||||||||||||||
Sbjct: 831 tccatagtcaatgtctcagcagttctctttccttcatcgtaacaactcctgacaccgatg 890
Query: 884 ggatt 888
|||||
Sbjct: 891 ggatt 895
>gb|CK098211.1|CK098211 A007P62.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A007P62 5', mRNA sequence
Length = 385
Score = 226 bits (114), Expect = 2e-057
Identities = 319/386 (82%), Gaps = 1/386 (0%)
Strand = Plus / Minus
Query: 553 aagctcaagcatggtgaactcgccagggttacccaggttgaatggccccacatgctcgcc 612
|||||| ||||||||||| || || || || || || ||||| |||| ||||| || ||
Sbjct: 385 aagctcgagcatggtgaattcacctggatttccaagattgaaaggccgtacatgttctcc 326
Query: 613 ttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaactcctggtttg 672
|||||| || ||||||||||||||||| |||||||||| |||| |||||||| || ||
Sbjct: 325 ttccataaggcgcatcagaccctcaaccaaatcagaaacaaattgaaaactccttgtctg 266
Query: 673 ctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttact 732
|| |||||||||||||| |||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 265 tttcccatcaccataaacagtcataggctccttccttagtgcctgagcaacaaaattact 206
Query: 733 gacaacacggccatcgtcaatgcacatgcgagggccatatgtattgaagatacgtgcgat 792
|||||||||||||| || |||||||| ||||| ||||| |||||||| || | || ||
Sbjct: 205 aacaacacggccatcatctatgcacattcgaggtccataagtattgaaaattctggcaat 146
Query: 793 cctaacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgctt 852
||||||||| | ||||| ||||| || ||||| ||||| || ||||| || | |||
Sbjct: 145 cctaacctctacaccagcacctcggtgatagtccatagtcaatgtctcagcagttctctt 86
Query: 853 gccctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtctccac 912
| ||||||||||| |||||||||||||||||||| || || |||||||||||||| ||
Sbjct: 85 -tcttcatcgtaacaactcctgacaccgatgggattaacgtttccccagtaagtctcgac 27
Query: 913 ctgcgggtgctggagaggatcaccat 938
||| || ||||| | |||||||||||
Sbjct: 26 ctgaggatgctgtaaaggatcaccat 1
>gb|BU825809.1|BU825809 UK113TD01 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 552
Score = 220 bits (111), Expect = 1e-055
Identities = 294/355 (82%)
Strand = Plus / Minus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggtta 583
||||| ||||| |||||||| ||||| |||||||| ||||||||||| || || || ||
Sbjct: 523 gggtcaatggtttcctggaccaccttagcaagctcgagcatggtgaattcacctggattt 464
Query: 584 cccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccaga 643
|| || ||||| ||||| ||||| || |||||||| || ||||||||||||||||| |
Sbjct: 463 ccaagattgaaaggccctacatgttctccttccataaggcgcatcagaccctcaaccaaa 404
Query: 644 tcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctcc 703
||||||||| |||| |||||||| || || || |||||||||||||| |||| ||||||
Sbjct: 403 tcagaaacaaattgaaaactccttgtctgtttcccatcaccataaacagtcataggctcc 344
Query: 704 ttcctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcga 763
||||| ||||||||||||||||| ||||| |||||||||||||| || |||||||| |||
Sbjct: 343 ttccttagtgcctgagcaacaaaattactaacaacacggccatcatctatgcacattcga 284
Query: 764 gggccatatgtattgaagatacgtgcgatcctaacctcaaggttggcaccacggtggtaa 823
|| ||||| |||||||| || | || ||||||||||| | ||||| ||||| ||
Sbjct: 283 ggtccataagtattgaaaattctggcaatcctaacctctacaccagcacctcggtgatag 224
Query: 824 tccatggtcaacgtttcagctgtacgcttgccctcatcgtaacagctcctgacac 878
||||| ||||| || ||||| || | ||| || ||||||||||| ||||||||||
Sbjct: 223 tccatagtcaatgtctcagcagttctctttccttcatcgtaacaactcctgacac 169
>gb|BI137576.1|BI137576 F088P66Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 469
Score = 212 bits (107), Expect = 3e-053
Identities = 236/279 (84%)
Strand = Plus / Minus
Query: 505 gaactcgatccgtgcgttggggtcgatggtgtcctggacaaccttggcaagctcaagcat 564
|||||| |||| ||| || || |||||||| |||||||| |||| ||||||||||||||
Sbjct: 330 gaactctatccttgcatttggatcgatggtttcctggaccacctgagcaagctcaagcat 271
Query: 565 ggtgaactcgccagggttacccaggttgaatggccccacatgctcgccttccatcagctt 624
|||||| || || || || || || ||||| ||||| ||||| || |||||||| ||
Sbjct: 270 ggtgaattcacccggattcccaagattgaaaggccctacatgttctccttccataaggcg 211
Query: 625 catcagaccctcaaccagatcagaaacatattggaaactcctggtttgctttccatcacc 684
|||||| |||||||||| |||||||||| |||| |||||||| || || || ||||||||
Sbjct: 210 catcaggccctcaaccaaatcagaaacaaattgaaaactcctagtctgtttcccatcacc 151
Query: 685 ataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttactgacaacacggcc 744
|||||| |||| || |||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 150 ataaacagtcataggttccttcctcagtgcctgagcaacaaaattactaacaacacggcc 91
Query: 745 atcgtcaatgcacatgcgagggccatatgtattgaagat 783
||| ||||||||||| || || ||||| |||||||||||
Sbjct: 90 atcatcaatgcacatccggggtccataagtattgaagat 52
>gb|CV242276.1|CV242276 WS02514.B21.1_J24 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02514_J24 3', mRNA sequence
Length = 856
Score = 210 bits (106), Expect = 1e-052
Identities = 235/278 (84%)
Strand = Plus / Plus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggtta 583
||||| ||||| |||||||| |||| ||||||||| ||||||||||| || || || ||
Sbjct: 575 gggtcaatggtttcctggaccacctgggcaagctcgagcatggtgaattcacccggattt 634
Query: 584 cccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccaga 643
|| || ||||| ||||| ||||| || |||||||| || ||||||||||||||||| |
Sbjct: 635 ccaagattgaaaggccctacatgttctccttccataaggcgcatcagaccctcaaccaaa 694
Query: 644 tcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctcc 703
||||||||| |||| |||||||| || || || |||||||||||||| |||| ||||||
Sbjct: 695 tcagaaacaaattgaaaactccttgtctgtttcccatcaccataaacagtcataggctcc 754
Query: 704 ttcctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcga 763
||||| ||||||||||||||||| ||||| |||||||||||||| || |||||||| |||
Sbjct: 755 ttccttagtgcctgagcaacaaaattactaacaacacggccatcatctatgcacattcga 814
Query: 764 gggccatatgtattgaagatacgtgcgatcctaacctc 801
|| ||||| |||||||| || | || |||||||||||
Sbjct: 815 ggtccataagtattgaaaattctagcaatcctaacctc 852
>gb|BI137782.1|BI137782 F093P42Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 432
Score = 204 bits (103), Expect = 7e-051
Identities = 235/279 (84%)
Strand = Plus / Minus
Query: 505 gaactcgatccgtgcgttggggtcgatggtgtcctggacaaccttggcaagctcaagcat 564
|||||| |||| ||| || || |||||||| |||||||| |||| ||||||||||||||
Sbjct: 304 gaactctatccttgcatttggatcgatggtttcctggaccacctgagcaagctcaagcat 245
Query: 565 ggtgaactcgccagggttacccaggttgaatggccccacatgctcgccttccatcagctt 624
|||||| || || || || || || ||||| ||||| ||||| || |||||||| ||
Sbjct: 244 ggtgaattcacccggattcccaagattgaaaggccctacatgttctccttccataaggcg 185
Query: 625 catcagaccctcaaccagatcagaaacatattggaaactcctggtttgctttccatcacc 684
|||||| |||||||||| |||||||||| |||| | |||||| || || || ||||||||
Sbjct: 184 catcaggccctcaaccaaatcagaaacaaattgaacactcctagtctgtttcccatcacc 125
Query: 685 ataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttactgacaacacggcc 744
|||||| |||| || |||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 124 ataaacagtcataggttccttcctcagtgcctgagcaacaaaattactaacaacacggcc 65
Query: 745 atcgtcaatgcacatgcgagggccatatgtattgaagat 783
||| ||||||||||| || || ||||| |||||||||||
Sbjct: 64 atcatcaatgcacatccggggtccataagtattgaagat 26
>gb|DT494608.1|DT494608 WS01118.BR.1_O19 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01118_O19 5', mRNA sequence
Length = 723
Score = 202 bits (102), Expect = 3e-050
Identities = 216/254 (85%)
Strand = Plus / Minus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggtta 583
||||| ||||| |||||||| |||| ||||||||| ||||||||||| || || || ||
Sbjct: 255 gggtcaatggtttcctggaccacctgggcaagctcgagcatggtgaattcacccggattt 196
Query: 584 cccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccaga 643
|| || ||||| ||||| ||||| || |||||||| || ||||||||||||||||| |
Sbjct: 195 ccaagattgaaaggccctacatgttctccttccataaggcgcatcagaccctcaaccaaa 136
Query: 644 tcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctcc 703
||||||||| |||| |||||||| || || || |||||||||||||| |||| ||||||
Sbjct: 135 tcagaaacaaattgaaaactccttgtctgtttcccatcaccataaacagtcataggctcc 76
Query: 704 ttcctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcga 763
||||| ||||||||||||||||| ||||| |||||||||||||| || |||||||| |||
Sbjct: 75 ttccttagtgcctgagcaacaaaattactaacaacacggccatcatctatgcacattcga 16
Query: 764 gggccatatgtatt 777
|| ||||| |||||
Sbjct: 15 ggtccataagtatt 2
>gb|DT519855.1|DT519855 WS02443.B21_N22 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02443_N22 3', mRNA sequence
Length = 905
Score = 196 bits (99), Expect = 2e-048
Identities = 216/255 (84%)
Strand = Plus / Plus
Query: 505 gaactcgatccgtgcgttggggtcgatggtgtcctggacaaccttggcaagctcaagcat 564
|||||| |||| ||| || || |||||||| |||||||| |||| ||||||||||||||
Sbjct: 650 gaactctatccttgcatttggatcgatggtttcctggaccacctgagcaagctcaagcat 709
Query: 565 ggtgaactcgccagggttacccaggttgaatggccccacatgctcgccttccatcagctt 624
|||||| || || || || || || ||||| ||||| ||||| || |||||||| ||
Sbjct: 710 ggtgaattcacccggattcccaagattgaaaggccctacatgttctccttccataaggcg 769
Query: 625 catcagaccctcaaccagatcagaaacatattggaaactcctggtttgctttccatcacc 684
|||||| |||||||||| |||||||||| |||| |||||||| || || || ||||||||
Sbjct: 770 catcaggccctcaaccaaatcagaaacaaattgaaaactcctagtctgtttcccatcacc 829
Query: 685 ataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttactgacaacacggcc 744
|||||| |||| || |||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 830 ataaacagtcataggttccttcctcagtgcctgagcaacaaaattactaacaacacggcc 889
Query: 745 atcgtcaatgcacat 759
||| |||||||||||
Sbjct: 890 atcatcaatgcacat 904
>gb|CV233669.1|CV233669 WS01211.B21_O21 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01211_O21 3', mRNA sequence
Length = 704
Score = 190 bits (96), Expect = 1e-046
Identities = 201/236 (85%)
Strand = Plus / Plus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggtta 583
||||| ||||| |||||||| |||| ||||||||| ||||||||||| || || || ||
Sbjct: 468 gggtcaatggtttcctggaccacctgggcaagctcgagcatggtgaattcacccggattt 527
Query: 584 cccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccaga 643
|| || ||||| ||||| ||||| || |||||||| || ||||||||||||||||| |
Sbjct: 528 ccaagattgaaaggccctacatgttctccttccataaggcgcatcagaccctcaaccaaa 587
Query: 644 tcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctcc 703
||||||||| |||| |||||||| || || || |||||||||||||| |||| ||||||
Sbjct: 588 tcagaaacaaattgaaaactccttgtctgtttcccatcaccataaacagtcataggctcc 647
Query: 704 ttcctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcacat 759
||||| ||||||||||||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 648 ttccttagtgcctgagcaacaaaattactaacaacacggccatcatctatgcacat 703
>gb|CV247664.1|CV247664 WS01118.B21_O19 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01118_O19 3', mRNA sequence
Length = 700
Score = 182 bits (92), Expect = 3e-044
Identities = 191/224 (85%)
Strand = Plus / Plus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggtta 583
||||| ||||| |||||||| |||| ||||||||| ||||||||||| || || || ||
Sbjct: 469 gggtcaatggtttcctggaccacctgggcaagctcgagcatggtgaattcacccggattt 528
Query: 584 cccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccaga 643
|| || ||||| ||||| ||||| || |||||||| || ||||||||||||||||| |
Sbjct: 529 ccaagattgaaaggccctacatgttctccttccataaggcgcatcagaccctcaaccaaa 588
Query: 644 tcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctcc 703
||||||||| |||| |||||||| || || || |||||||||||||| |||| ||||||
Sbjct: 589 tcagaaacaaattgaaaactccttgtctgtttcccatcaccataaacagtcataggctcc 648
Query: 704 ttcctcagtgcctgagcaacaaagttactgacaacacggccatc 747
||||| ||||||||||||||||| ||||| ||||||||||||||
Sbjct: 649 ttccttagtgcctgagcaacaaaattactaacaacacggccatc 692
>gb|BI119774.1|BI119774 F005P05Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 302
Score = 178 bits (90), Expect = 4e-043
Identities = 245/294 (83%), Gaps = 2/294 (0%)
Strand = Plus / Minus
Query: 633 cctcaaccagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccg 692
||||||||| |||||||||| |||| |||||||| || || || |||||||||||||| |
Sbjct: 302 cctcaaccaaatcagaaacaaattgaaaactccttgtctgtttcccatcaccataaacag 243
Query: 693 tcaagggctccttcctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaa 752
||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||| || |
Sbjct: 242 tcataggctccttccttagtgcctgagcaacaaaattactaacaacacggccatcatcta 183
Query: 753 tgcacatgcgagggccatatgtattgaagatacgtgcgatcctaacctcaaggttggcac 812
||||||| ||||| ||||| |||||||| || | || ||||||||||| | ||||
Sbjct: 182 tgcacattcgaggtccataagtattgaaaattctagcaatcctaacctctacaccagcac 123
Query: 813 cacggtggtaatccatggtcaacgtttcagctgtacgcttgccctca-tcgtaacagctc 871
| ||||| || ||||| ||||| || ||||| || | ||| || ||| | |||||| |||
Sbjct: 122 ctcggtgatagtccatagtcaatgtctcagcagttctctttccttcattggtaacaactc 63
Query: 872 ctgacaccgatgggattgac-attgccccagtaagtctccacctgcgggtgctg 924
||||||||||||||||| || ||||||||||||||||| ||||| || |||||
Sbjct: 62 ctgacaccgatgggattaacggttgccccagtaagtctcgacctgaggatgctg 9
>gb|BI135440.1|BI135440 F051P45Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 257
Score = 168 bits (85), Expect = 4e-040
Identities = 209/249 (83%), Gaps = 1/249 (0%)
Strand = Plus / Minus
Query: 677 ccatcaccataaaccgtcaagggctccttcctcagtgcctgagcaacaaagttactgaca 736
|||||||||||||| |||| ||||||||||| ||||||||||||||||| ||||| |||
Sbjct: 257 ccatcaccataaacagtcataggctccttccttagtgcctgagcaacaaaattactaaca 198
Query: 737 acac-ggccatcgtcaatgcacatgcgagggccatatgtattgaagatacgtgcgatcct 795
|||| ||||||| || |||||||| ||||| ||||| |||||||| || | || |||||
Sbjct: 197 acacgggccatcatctatgcacattcgaggtccataagtattgaaaattctagcaatcct 138
Query: 796 aacctcaaggttggcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgcc 855
|||||| | ||||| ||||| || ||||| ||||| || ||||| || | ||| ||
Sbjct: 137 aacctctacaccagcacctcggtgatagtccatagtcaatgtctcagcagttctctttcc 78
Query: 856 ctcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtctccacctg 915
||||||||||| |||||||||||||||||||| || ||||||||||||||||| |||||
Sbjct: 77 ttcatcgtaacaactcctgacaccgatgggattaacgttgccccagtaagtctcgacctg 18
Query: 916 cgggtgctg 924
|| |||||
Sbjct: 17 aggatgctg 9
>gb|CX653431.1|CX653431 PO02001G11 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02001G11 5', mRNA sequence
Length = 454
Score = 163 bits (82), Expect = 2e-038
Identities = 187/222 (84%)
Strand = Plus / Minus
Query: 505 gaactcgatccgtgcgttggggtcgatggtgtcctggacaaccttggcaagctcaagcat 564
|||||| |||| ||| || || |||||||| |||||||| |||| ||||||||||||||
Sbjct: 226 gaactctatccttgcatttggatcgatggtttcctggaccacctgagcaagctcaagcat 167
Query: 565 ggtgaactcgccagggttacccaggttgaatggccccacatgctcgccttccatcagctt 624
|||||| || || || || || || ||||| ||||| ||||| || |||||||| ||
Sbjct: 166 ggtgaattcacctggattcccaagattgaaaggccctacatgttctccttccataaggcg 107
Query: 625 catcagaccctcaaccagatcagaaacatattggaaactcctggtttgctttccatcacc 684
|||||| ||||||||||||||||||||| |||| |||||||| || || || ||||||||
Sbjct: 106 catcaggccctcaaccagatcagaaacaaattgaaaactcctagtctgtttcccatcacc 47
Query: 685 ataaaccgtcaagggctccttcctcagtgcctgagcaacaaa 726
|||||| |||| ||| |||||||||||||||||||| |||||
Sbjct: 46 ataaacagtcatgggttccttcctcagtgcctgagcgacaaa 5
>gb|BI129436.1|BI129436 G090P66Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 542
Score = 157 bits (79), Expect = 1e-036
Identities = 181/215 (84%)
Strand = Plus / Minus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggtta 583
||||| ||||| |||||||| ||||| |||||||| ||||||||| | || || || ||
Sbjct: 215 gggtcaatggtttcctggaccaccttagcaagctcgagcatggtgcattcacctggattt 156
Query: 584 cccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccaga 643
|| || ||||| ||||| ||||| || |||||||| || ||||||||||||||||| |
Sbjct: 155 ccaagattgaaaggccctacatgttctccttccataaggcgcatcagaccctcaaccaaa 96
Query: 644 tcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctcc 703
||||||||| |||| |||||||| || || || |||||||||||||| |||| ||||||
Sbjct: 95 tcagaaacaaattgaaaactccttgtctgtttcccatcaccataaacagtcataggctcc 36
Query: 704 ttcctcagtgcctgagcaacaaagttactgacaac 738
||||| ||||||||||||||||| ||||| |||||
Sbjct: 35 ttccttagtgcctgagcaacaaaattactaacaac 1
>gb|BI130649.1|BI130649 G108P73Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 370
Score = 155 bits (78), Expect = 6e-036
Identities = 171/202 (84%)
Strand = Plus / Minus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggtta 583
||||| ||||| |||||||| ||||| |||||||| ||||||||||| || || || ||
Sbjct: 202 gggtcaatggtttcctggaccaccttagcaagctcgagcatggtgaattcacctggattt 143
Query: 584 cccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccaga 643
|| || ||||| ||||| ||||| || |||||||| || ||||||||||||||||| |
Sbjct: 142 ccaagattgaaaggccctacatgttctccttccataaggcgcatcagaccctcaaccaaa 83
Query: 644 tcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctcc 703
||||||||| |||| |||||||| || || || |||||||||||||| |||| ||||||
Sbjct: 82 tcagaaacaaattgaaaactccttgtctgtttcccatcaccataaacagtcataggctcc 23
Query: 704 ttcctcagtgcctgagcaacaa 725
||||| ||||||||||||||||
Sbjct: 22 ttccttagtgcctgagcaacaa 1
>gb|DT523430.1|DT523430 WS02039.B21_K21 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02039_K21 3', mRNA sequence
Length = 890
Score = 143 bits (72), Expect = 2e-032
Identities = 195/236 (82%)
Strand = Plus / Plus
Query: 542 acaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggcccc 601
||||||| |||||||||||||| |||||||| || ||||| || |||||||| || |||
Sbjct: 495 acaacctctgcaagctcaagcatagtgaactctcctgggttgccaaggttgaaaggtccc 554
Query: 602 acatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattggaaa 661
||||||||||||||||| || || ||| || |||||||| |||||||||||||||||
Sbjct: 555 acatgctcgccttccattagagccaccagcccatcaaccaggtcagaaacatattggaag 614
Query: 662 ctcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcctgagca 721
||||| ||||| || ||||| |||||||| |||| |||| || | | ||||||||
Sbjct: 615 ctcctagtttgtttcccatccccataaacagtcattggctgtttgcgaatgacctgagca 674
Query: 722 acaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgtatt 777
|| || |||||||||||||| ||||| || | ||||||||||| |||||||||||
Sbjct: 675 acgaaattactgacaacacgtccatcatccaaacacatgcgaggcccatatgtatt 730
>gb|CN522526.1|CN522526 GQ0121.B3_F24 GQ012 Populus trichocarpa x Populus deltoides cDNA
clone GQ0121_F24 5', mRNA sequence
Length = 467
Score = 129 bits (65), Expect = 3e-028
Identities = 155/185 (83%)
Strand = Plus / Minus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggtta 583
||||| ||||| |||||||| |||| ||||||||| ||||||||||| || || || ||
Sbjct: 186 gggtcaatggtttcctggaccacctgggcaagctcgagcatggtgaattcacctggattt 127
Query: 584 cccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccaga 643
|| || ||||| ||||| ||||| || |||||||| || ||||||||||||||||| |
Sbjct: 126 ccaagattgaaaggccctacatgttctccttccataaggcgcatcagaccctcaaccaaa 67
Query: 644 tcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctcc 703
||||||||| |||| |||||||| || || || |||||||||||||| |||| ||||||
Sbjct: 66 tcagaaacaaattgaaaactccttgtctgtttcccatcaccataaacagtcataggctcc 7
Query: 704 ttcct 708
|||||
Sbjct: 6 ttcct 2
>gb|CV236293.1|CV236293 WS01223.B21_J13 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01223_J13 3', mRNA sequence
Length = 867
Score = 123 bits (62), Expect = 2e-026
Identities = 197/242 (81%)
Strand = Plus / Plus
Query: 536 tcctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaat 595
|||| |||||||| |||||||| ||||| |||||||| || ||||| || ||||||||
Sbjct: 586 tccttgacaacctctgcaagctcgagcatagtgaactctcctgggttgccaaggttgaaa 645
Query: 596 ggccccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatat 655
|| ||||| |||||||||||||| || || ||| || |||||||| ||||||||||||
Sbjct: 646 ggtcccacgtgctcgccttccattagagccaccagcccatcaaccaggtcagaaacatat 705
Query: 656 tggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcc 715
||||| ||||| ||||| || ||||| ||||| || |||| |||| || | | ||
Sbjct: 706 tggaagctcctagtttgtttcccatccccatatacagtcattggctgtttgcgaatgacc 765
Query: 716 tgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgta 775
|||||||| || |||||||||||||| ||||| || | ||||||||||| |||||||||
Sbjct: 766 tgagcaacgaaattactgacaacacgtccatcatccaaacacatgcgaggcccatatgta 825
Query: 776 tt 777
||
Sbjct: 826 tt 827
>gb|DN493626.1|DN493626 G073P36.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G073P36 5', mRNA sequence
Length = 757
Score = 119 bits (60), Expect = 3e-025
Identities = 201/248 (81%)
Strand = Plus / Minus
Query: 530 atggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccagg 589
||||| |||| |||||||| |||||||| ||||| |||||||| || ||||| || | |
Sbjct: 349 atggtctccttgacaacctctgcaagctcgagcatagtgaactctcctgggttgccaacg 290
Query: 590 ttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaa 649
||||| || ||||| |||||||||||||| || || ||| || |||||||| ||||||
Sbjct: 289 ttgaaaggtcccacgtgctcgccttccattagagccaccagcccatcaaccaggtcagaa 230
Query: 650 acatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctc 709
||||||||||| ||||| ||||| || ||||| ||||| || |||| |||| || |
Sbjct: 229 acatattggaagctcctagtttgtttcccatccccatatacagtcattggctgattgcga 170
Query: 710 agtgcctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggcca 769
| |||||||||| || |||||||||||||| ||||| || | ||||||||||| |||
Sbjct: 169 atgacctgagcaacgaaattactgacaacacgtccatcatccaaacacatgcgaggccca 110
Query: 770 tatgtatt 777
||||||||
Sbjct: 109 tatgtatt 102
>gb|CK116642.1|CK116642 B015P14 Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B015P14 5', mRNA sequence
Length = 443
Score = 115 bits (58), Expect = 5e-024
Identities = 169/206 (82%)
Strand = Plus / Minus
Query: 752 atgcacatgcgagggccatatgtattgaagatacgtgcgatcctaacctcaaggttggca 811
|||||||| ||||| ||||| |||||||| || | || ||||||||||| | |||
Sbjct: 335 atgcacattcgaggtccataagtattgaaaattctggcaatcctaacctctacaccagca 276
Query: 812 ccacggtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgtaacagctc 871
|| ||||| || ||||| ||||| || ||||| || | ||| || | ||||||||| |||
Sbjct: 275 cctcggtgatagtccatagtcaatgtctcagcagttctctttccttaatcgtaacaactc 216
Query: 872 ctgacaccgatgggattgacattgccccagtaagtctccacctgcgggtgctggagagga 931
||||||||||||||||| || || |||||||||||||| ||||| || ||||| | ||||
Sbjct: 215 ctgacaccgatgggattaacgtttccccagtaagtctcgacctgaggatgctgtaaagga 156
Query: 932 tcaccatagacctcactggtactggt 957
|||||||| ||||| |||||||||||
Sbjct: 155 tcaccataaacctcgctggtactggt 130
>gb|DT499631.1|DT499631 WS0118.BR_N17 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0118_N17
5', mRNA sequence
Length = 565
Score = 115 bits (58), Expect = 5e-024
Identities = 196/242 (80%)
Strand = Plus / Minus
Query: 536 tcctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaat 595
|||| |||||||| ||||||| ||||| |||||||| || ||||| || ||||||||
Sbjct: 266 tccttgacaacctctgcaagctggagcatagtgaactctcctgggttgccaaggttgaaa 207
Query: 596 ggccccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatat 655
|| ||||| |||||||||||||| || || ||| || |||||||| ||||||||||||
Sbjct: 206 ggtcccacgtgctcgccttccattagagccaccagcccatcaaccaggtcagaaacatat 147
Query: 656 tggaaactcctggtttgctttccatcaccataaaccgtcaagggctccttcctcagtgcc 715
||||| ||||| ||||| || ||||| ||||| || |||| |||| || | | ||
Sbjct: 146 tggaagctcctagtttgtttcccatccccatatacagtcattggctgtttgcgaatgacc 87
Query: 716 tgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatgta 775
|||||||| || |||||||||||||| ||||| || | ||||||||||| |||||||||
Sbjct: 86 tgagcaacgaaattactgacaacacgtccatcatccaaacacatgcgaggcccatatgta 27
Query: 776 tt 777
||
Sbjct: 26 tt 25
>gb|BI127683.1|BI127683 G064P33Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 363
Score = 113 bits (57), Expect = 2e-023
Identities = 90/101 (89%)
Strand = Plus / Minus
Query: 857 tcatcgtaacagctcctgacaccgatgggattgacattgccccagtaagtctccacctgc 916
||||||||||| |||||||||||||||||||| || || |||||||||||||| |||||
Sbjct: 339 tcatcgtaacaactcctgacaccgatgggattaacgtttccccagtaagtctcgacctga 280
Query: 917 gggtgctggagaggatcaccatagacctcactggtactggt 957
|| ||||| | |||||||||||| ||||| |||||||||||
Sbjct: 279 ggatgctgtaaaggatcaccataaacctcgctggtactggt 239
>gb|BU834862.1|BU834862 T066F04 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 532
Score = 111 bits (56), Expect = 8e-023
Identities = 153/184 (83%), Gaps = 1/184 (0%)
Strand = Plus / Minus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggtta 583
||||| ||||| |||||||| ||||| |||||||| ||||||||||| || || || ||
Sbjct: 183 gggtcaatggtttcctggaccaccttagcaagctcgagcatggtgaattcacctggattt 124
Query: 584 cccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccaga 643
|| || ||||| ||||| ||||| || |||||||| || ||||||||||||||||| |
Sbjct: 123 ccaagattgaaaggccctacatgttctccttccataaggcgcatcagaccctcaaccaaa 64
Query: 644 tcagaaacatattggaaactcctggtttgctttccatcaccataaaccgtcaagggctcc 703
||||||||| |||| |||||||| | | | || |||||||||||||| |||| ||||||
Sbjct: 63 tcagaaacaaattgaaaactccttg-tcgtttcccatcaccataaacagtcataggctcc 5
Query: 704 ttcc 707
||||
Sbjct: 4 ttcc 1
>gb|BU884377.1|BU884377 R009G11 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 614
Score = 107 bits (54), Expect = 1e-021
Identities = 132/158 (83%)
Strand = Plus / Minus
Query: 530 atggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccagg 589
||||| |||| |||||||| |||||||| ||||| |||||||| || ||||| || |||
Sbjct: 194 atggtctccttgacaacctctgcaagctcgagcatagtgaactctcctgggttgccaagg 135
Query: 590 ttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaa 649
||||| || ||||| |||||||||||||| || || ||| || |||||||| ||||||
Sbjct: 134 ttgaaaggtcccacgtgctcgccttccattagagccaccagcccatcaaccaggtcagaa 75
Query: 650 acatattggaaactcctggtttgctttccatcaccata 687
||||||||||| ||||| ||||| || ||||| |||||
Sbjct: 74 acatattggaagctcctagtttgtttcccatccccata 37
>gb|CV246813.1|CV246813 WS01116.B21_A16 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01116_A16 3', mRNA sequence
Length = 706
Score = 105 bits (53), Expect = 5e-021
Identities = 144/173 (83%), Gaps = 1/173 (0%)
Strand = Plus / Plus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggtta 583
||||| ||||| |||||||| |||| ||||||||| ||||||||||| || || || ||
Sbjct: 531 gggtcaatggtttcctggaccacctgggcaagctcgagcatggtgaattcacccggattt 590
Query: 584 cccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccaga 643
|| || ||||| ||||| ||| | || |||||||| || ||||||||||||||||| |
Sbjct: 591 ccaagattgaaaggccctacacgttctccttccataaggcgcatcagaccctcaaccaaa 650
Query: 644 tcagaaacatattggaaactcc-tggtttgctttccatcaccataaaccgtca 695
||||||||| |||| ||||||| |||| || || |||||||||||||| ||||
Sbjct: 651 tcagaaacaaattgaaaactccttggtctgtttcccatcaccataaacagtca 703
>gb|CK091807.1|CK091807 F127P19.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F127P19 3', mRNA sequence
Length = 844
Score = 103 bits (52), Expect = 2e-020
Identities = 127/152 (83%)
Strand = Plus / Plus
Query: 536 tcctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaat 595
|||| |||||||| |||||||| ||||| |||||||| || ||||| || ||||||||
Sbjct: 398 tccttgacaacctctgcaagctcgagcatagtgaactctcctgggttgccaaggttgaaa 457
Query: 596 ggccccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatat 655
|| ||||| |||||||||||||| || || ||| || |||||||| ||||||||||||
Sbjct: 458 ggtcccacgtgctcgccttccattagagccaccagcccatcaaccaggtcagaaacatat 517
Query: 656 tggaaactcctggtttgctttccatcaccata 687
||||| ||||| ||||| || ||||| |||||
Sbjct: 518 tggaagctcctagtttgtttcccatccccata 549
Score = 63.9 bits (32), Expect = 2e-008
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 714 cctgagcaacaaagttactgacaacacggccatcgtcaatgcacatgcgagggccatatg 773
|||||||||| || |||||||||||||| ||||| || | ||||||||||| |||||||
Sbjct: 696 cctgagcaacgaaattactgacaacacgtccatcatccaaacacatgcgaggcccatatg 755
Query: 774 tatt 777
||||
Sbjct: 756 tatt 759
>gb|CV234257.1|CV234257 WS01214.B21_D24 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01214_D24 3', mRNA sequence
Length = 737
Score = 103 bits (52), Expect = 2e-020
Identities = 127/152 (83%)
Strand = Plus / Plus
Query: 536 tcctggacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaat 595
|||| |||||||| |||||||| ||||| |||||||| || ||||| || ||||||||
Sbjct: 586 tccttgacaacctctgcaagctcgagcatagtgaactctcctgggttgccaaggttgaaa 645
Query: 596 ggccccacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatat 655
|| ||||| |||||||||||||| || || ||| || |||||||| ||||||||||||
Sbjct: 646 ggtcccacgtgctcgccttccattagagccaccagcccatcaaccaggtcagaaacatat 705
Query: 656 tggaaactcctggtttgctttccatcaccata 687
||||| ||||| ||||| || ||||| |||||
Sbjct: 706 tggaagctcctagtttgtttcccatccccata 737
>gb|AI161839.1|AI161839 A007P62U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 531
Score = 95.6 bits (48), Expect = 5e-018
Identities = 115/132 (87%), Gaps = 4/132 (3%)
Strand = Plus / Minus
Query: 633 cctcaaccagatcagaaacatattggaaactcctggtttgctttccatcaccataaaccg 692
||||||||| |||||||||| |||| |||||||| || || || |||||||||||| | |
Sbjct: 255 cctcaacca-atcagaaacaaattg-aaactccttgtctgtttcccatcaccataa-cag 199
Query: 693 tcaagggctccttcctcagtgcctgagcaacaaagttactgacaacacggccatcgtcaa 752
||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||| || |
Sbjct: 198 tcataggctccttccttagtgcctgagcaacaaa-ttactaacaacacggccatcatcta 140
Query: 753 tgcacatgcgag 764
||||||| ||||
Sbjct: 139 tgcacattcgag 128
Score = 63.9 bits (32), Expect = 2e-008
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 809 gcaccacggtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgtaacag 868
||||| ||||| || ||||| ||||| || ||||| || | ||| || |||||||||||
Sbjct: 85 gcacctcggtgatagtccatagtcaatgtctcagcagttctctttccttcatcgtaacaa 26
Query: 869 ctcctgacaccgatgggatt 888
||||||||||||||||||||
Sbjct: 25 ctcctgacaccgatgggatt 6
>gb|CF235228.1|CF235228 PtaJXT0020C7C0705 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 436
Score = 91.7 bits (46), Expect = 7e-017
Identities = 106/126 (84%)
Strand = Plus / Minus
Query: 541 gacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccc 600
|||||||| || ||||| ||||| |||||||| || || || || |||||||| || ||
Sbjct: 132 gacaacctctgcgagctctagcatagtgaactctcctggattgccaaggttgaaaggtcc 73
Query: 601 cacatgctcgccttccatcagcttcatcagaccctcaaccagatcagaaacatattggaa 660
|||||||||||||||||| || || ||| || ||||||||||||||||||||||||||
Sbjct: 72 cacatgctcgccttccattagtgccaccagcccatcaaccagatcagaaacatattggaa 13
Query: 661 actcct 666
|||||
Sbjct: 12 gctcct 7
>gb|CX653925.1|CX653925 PO02009F04 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02009F04 5', mRNA sequence
Length = 495
Score = 91.7 bits (46), Expect = 7e-017
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 876 caccgatgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcac 935
||||||||||||| || ||||||||||||||||| ||||| || ||||| | ||||||||
Sbjct: 293 caccgatgggattaacgttgccccagtaagtctcgacctgaggatgctgtaaaggatcac 234
Query: 936 catagacctcactggtactggt 957
|||| ||||| |||||||||||
Sbjct: 233 cataaacctcgctggtactggt 212
>gb|BI129897.1|BI129897 G097P09Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 363
Score = 83.8 bits (42), Expect = 2e-014
Identities = 111/134 (82%)
Strand = Plus / Minus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaactcgccagggtta 583
||||| ||||| |||||||| ||||| |||||||| ||||||| ||| || || || ||
Sbjct: 137 gggtcaatggtttcctggaccaccttagcaagctcgagcatggcgaattcacctggattt 78
Query: 584 cccaggttgaatggccccacatgctcgccttccatcagcttcatcagaccctcaaccaga 643
|| || ||||| ||||| ||||| || |||||||| || ||||||||||||||||| |
Sbjct: 77 ccaagattgaaaggccctacatgttctccttccataaggcgcatcagaccctcaaccaaa 18
Query: 644 tcagaaacatattg 657
||||||||| ||||
Sbjct: 17 tcagaaacaaattg 4
>gb|DT473267.1|DT473267 WS01229.BR_B21 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_B21 5', mRNA sequence
Length = 913
Score = 75.8 bits (38), Expect = 4e-012
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 896 ccccagtaagtctccacctgcgggtgctggagaggatcaccatagacctcactggtactg 955
|||||||||||||| ||||| || ||||| |||||||||||||| ||||| |||||||||
Sbjct: 900 ccccagtaagtctcgacctgaggatgctgtagaggatcaccataaacctcgctggtactg 841
Query: 956 gt 957
||
Sbjct: 840 gt 839
>gb|CV251224.1|CV251224 WS0116.B21_E05 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0116_E05 3', mRNA sequence
Length = 611
Score = 73.8 bits (37), Expect = 2e-011
Identities = 112/137 (81%)
Strand = Plus / Plus
Query: 505 gaactcgatccgtgcgttggggtcgatggtgtcctggacaaccttggcaagctcaagcat 564
|||||| |||| ||| || || |||||||| |||||||| |||| ||||||||||||||
Sbjct: 471 gaactctatccttgcatttggatcgatggtttcctggaccacctgagcaagctcaagcat 530
Query: 565 ggtgaactcgccagggttacccaggttgaatggccccacatgctcgccttccatcagctt 624
|||||| || || || || || || ||||| ||||| ||||| || |||||||| ||
Sbjct: 531 ggtgaattcacccggattcccaagattgaaaggccctacatgttctccttccataaggcg 590
Query: 625 catcagaccctcaacca 641
|||||| ||||||||||
Sbjct: 591 catcaggccctcaacca 607
>gb|DT492733.1|DT492733 WS02552.C21_C13 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02552_C13 3', mRNA sequence
Length = 599
Score = 73.8 bits (37), Expect = 2e-011
Identities = 112/137 (81%)
Strand = Plus / Plus
Query: 505 gaactcgatccgtgcgttggggtcgatggtgtcctggacaaccttggcaagctcaagcat 564
|||||| |||| ||| || || |||||||| |||||||| |||| ||||||||||||||
Sbjct: 459 gaactctatccttgcatttggatcgatggtttcctggaccacctgagcaagctcaagcat 518
Query: 565 ggtgaactcgccagggttacccaggttgaatggccccacatgctcgccttccatcagctt 624
|||||| || || || || || || ||||| ||||| ||||| || |||||||| ||
Sbjct: 519 ggtgaattcacccggattcccaagattgaaaggccctacatgttctccttccataaggcg 578
Query: 625 catcagaccctcaacca 641
|||||| ||||||||||
Sbjct: 579 catcaggccctcaacca 595
>gb|BI132071.1|BI132071 G130P62Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 463
Score = 71.9 bits (36), Expect = 7e-011
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 882 tgggattgacattgccccagtaagtctccacctgcgggtgctggagaggatcaccataga 941
||||||| || || |||||||||||||| ||||| || ||||| | |||||||||||| |
Sbjct: 463 tgggattaacgtttccccagtaagtctcgacctgaggatgctgtaaaggatcaccataaa 404
Query: 942 cctcactggtactggt 957
|||| |||||||||||
Sbjct: 403 cctcgctggtactggt 388
>gb|CK088221.1|CK088221 A044P24.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A044P24 3', mRNA sequence
Length = 798
Score = 60.0 bits (30), Expect = 3e-007
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 541 gacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccc 600
|||||||| || ||||| ||||| |||||||| || || || || |||||||| || ||
Sbjct: 432 gacaacctctgctagctctagcatagtgaactctcctggattgccaaggttgaaaggtcc 491
Query: 601 cacatgctcgccttccat 618
||||||||||||||||||
Sbjct: 492 cacatgctcgccttccat 509
>gb|CF232400.1|CF232400 PtaJXO0010A5H0816 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 665
Score = 54.0 bits (27), Expect = 2e-005
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaa 570
||||| ||||| |||||||| ||||| |||||||| |||||||||||
Sbjct: 80 gggtcaatggtttcctggaccaccttagcaagctcgagcatggtgaa 34
>gb|CV230060.1|CV230060 WS01915.B21_E22 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01915_E22 3', mRNA sequence
Length = 609
Score = 54.0 bits (27), Expect = 2e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaa 570
||||| ||||| |||||||| |||| ||||||||| |||||||||||
Sbjct: 521 gggtcaatggtttcctggaccacctgggcaagctcgagcatggtgaa 567
>gb|CV241062.1|CV241062 WS02511.B21_B22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02511_B22 3', mRNA sequence
Length = 521
Score = 54.0 bits (27), Expect = 2e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaa 570
||||| ||||| |||||||| |||| ||||||||| |||||||||||
Sbjct: 469 gggtcaatggtttcctggaccacctgggcaagctcgagcatggtgaa 515
>gb|DT469792.1|DT469792 WS01918.C21_O11 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01918_O11 3', mRNA sequence
Length = 557
Score = 54.0 bits (27), Expect = 2e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 524 gggtcgatggtgtcctggacaaccttggcaagctcaagcatggtgaa 570
||||| ||||| |||||||| |||| ||||||||| |||||||||||
Sbjct: 492 gggtcaatggtttcctggaccacctgggcaagctcgagcatggtgaa 538
>gb|CA925513.1|CA925513 MTU7TL.P2.D03 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 595
Score = 52.0 bits (26), Expect = 6e-005
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 541 gacaaccttggcaagctcaagcatggtgaactcgccagggttacccaggttgaatggccc 600
|||||||| || ||||| ||||| ||| |||| || || || || |||||||| || ||
Sbjct: 380 gacaacctgtgcgagctctagcatagtgtactctcctggattgccaaggttgaaaggtcc 321
Query: 601 cacatgctcgccttccat 618
||||||||||||||||||
Sbjct: 320 cacatgctcgccttccat 303
>gb|CV277427.1|CV277427 WS0143.B21_I24 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0143_I24 3', mRNA sequence
Length = 503
Score = 52.0 bits (26), Expect = 6e-005
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 505 gaactcgatccgtgcgttggggtcgatggtgtcctggacaaccttggcaagctcaagcat 564
|||||| |||| ||| || || || ||||| |||||||| |||| ||||||||||||||
Sbjct: 414 gaactctatccttgcatttggatcaatggtttcctggaccacctgagcaagctcaagcat 473
Query: 565 ggtgaa 570
||||||
Sbjct: 474 ggtgaa 479
>gb|BI127468.1|BI127468 G061P13Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 441
Score = 48.1 bits (24), Expect = 0.001
Identities = 117/148 (79%)
Strand = Plus / Minus
Query: 810 caccacggtggtaatccatggtcaacgtttcagctgtacgcttgccctcatcgtaacagc 869
|||| ||||| ||||||||||| | ||||| || || || || || ||||| || || |
Sbjct: 441 cacctcggtgataatccatggttagtgtttctgccgtccgttttccttcatcatagcaac 382
Query: 870 tcctgacaccgatgggattgacattgccccagtaagtctccacctgcgggtgctggagag 929
|||| |||| || ||||| ||||| ||||| || |||||| |||||| |||| || |
Sbjct: 381 tcctctcacctattggattcacatttccccaatatgtctccttctgcggatgctcaaggg 322
Query: 930 gatcaccatagacctcactggtactggt 957
|||| ||||| |||||||| ||||||||
Sbjct: 321 gatctccataaacctcactcgtactggt 294
>gb|DN484314.1|DN484314 G116P87.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G116P87 3', mRNA sequence
Length = 266
Score = 44.1 bits (22), Expect = 0.015
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 393 ccatgaggggaaggccctcacgcagggggatcttcggttcccaccc 438
||||||||||||| ||||| ||||| |||||| |||||||||||
Sbjct: 187 ccatgaggggaagaccctcgcgcagcttgatctttggttcccaccc 232
>gb|AI165131.1|AI165131 A076P64U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 333
Score = 42.1 bits (21), Expect = 0.060
Identities = 49/57 (85%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| || ||||||| ||| || || ||||| ||||||||||||||
Sbjct: 303 acgcttcccctcatcatagcagctcc-gaccccaattggattaacattgccccagta 248
>gb|CN549824.1|CN549824 GQ0244.B3_B01 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0244_B01 5', mRNA sequence
Length = 687
Score = 42.1 bits (21), Expect = 0.060
Identities = 48/57 (84%)
Strand = Plus / Minus
Query: 847 acgcttgccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||| |||||||| || ||||||| || || || ||||| ||||||||||||||
Sbjct: 324 acgcttcccctcatcatagcagctccgaaccccaattggattaacattgccccagta 268
>gb|DT494155.1|DT494155 WS01117.BR_J07 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01117_J07 5', mRNA sequence
Length = 871
Score = 42.1 bits (21), Expect = 0.060
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 929 ggatcaccatagacctcactggtactggt 957
||||||||||| ||||| |||||||||||
Sbjct: 871 ggatcaccataaacctcgctggtactggt 843
>gb|CF229028.1|CF229028 PtaXM0020C6C0606 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 680
Score = 40.1 bits (20), Expect = 0.24
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 731 ctgacaacacggccatcgtcaatg 754
||||||||||||||||| ||||||
Sbjct: 83 ctgacaacacggccatcatcaatg 60
>gb|BI069315.1|BI069315 C035P28U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 316
Score = 38.2 bits (19), Expect = 0.93
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 677 ccatcaccataaaccgtca 695
|||||||||||||||||||
Sbjct: 235 ccatcaccataaaccgtca 253
>gb|CK090406.1|CK090406 F003P25.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F003P25 3', mRNA sequence
Length = 866
Score = 38.2 bits (19), Expect = 0.93
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1247 gttgttgaaaattgaaatg 1265
|||||||||||||||||||
Sbjct: 327 gttgttgaaaattgaaatg 309
>gb|CV230664.1|CV230664 WS0192.B21_E05 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS0192_E05
3', mRNA sequence
Length = 439
Score = 38.2 bits (19), Expect = 0.93
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1246 tgttgttgaaaattgaaat 1264
|||||||||||||||||||
Sbjct: 419 tgttgttgaaaattgaaat 437
>gb|CX168862.1|CX168862 D09_69-79_07.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 679
Score = 38.2 bits (19), Expect = 0.93
Identities = 37/43 (86%)
Strand = Plus / Plus
Query: 393 ccatgaggggaaggccctcacgcagggggatcttcggttccca 435
||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 258 ccatgagaggaaggccatcacgcagcttaatcttcggttccca 300
>gb|CX186838.1|CX186838 A07_45-65_01.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 687
Score = 38.2 bits (19), Expect = 0.93
Identities = 37/43 (86%)
Strand = Plus / Plus
Query: 393 ccatgaggggaaggccctcacgcagggggatcttcggttccca 435
||||||| |||||||| |||||||| ||||||||||||||
Sbjct: 349 ccatgagaggaaggccatcacgcagcttaatcttcggttccca 391
>gb|BU825721.1|BU825721 UK112TC11 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 607
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 137 gagaactgagaaagaaaa 154
||||||||||||||||||
Sbjct: 2 gagaactgagaaagaaaa 19
>gb|BU875894.1|BU875894 V012G10 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 631
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 140 aactgagaaagaaaaaat 157
||||||||||||||||||
Sbjct: 16 aactgagaaagaaaaaat 33
>gb|BU877541.1|BU877541 V036A05 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 650
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 140 aactgagaaagaaaaaat 157
||||||||||||||||||
Sbjct: 37 aactgagaaagaaaaaat 54
>gb|CA820784.1|CA820784 F03C04 two-month-old leaves from clone 'Beaupre' Populus
trichocarpa x Populus deltoides cDNA 5', mRNA sequence
Length = 283
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 140 aactgagaaagaaaaaat 157
||||||||||||||||||
Sbjct: 87 aactgagaaagaaaaaat 104
>gb|CA820877.1|CA820877 F05B10 two-month-old leaves from clone 'Beaupre' Populus
trichocarpa x Populus deltoides cDNA 5', mRNA sequence
Length = 299
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 140 aactgagaaagaaaaaat 157
||||||||||||||||||
Sbjct: 94 aactgagaaagaaaaaat 111
>gb|CA824519.1|CA824519 R43H12 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 628
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 140 aactgagaaagaaaaaat 157
||||||||||||||||||
Sbjct: 62 aactgagaaagaaaaaat 79
>gb|CK099674.1|CK099674 A080P20.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A080P20 5', mRNA sequence
Length = 560
Score = 36.2 bits (18), Expect = 3.7
Identities = 42/50 (84%)
Strand = Plus / Minus
Query: 854 ccctcatcgtaacagctcctgacaccgatgggattgacattgccccagta 903
|||||||| || ||||||| || || || ||||| ||||||||||||||
Sbjct: 67 ccctcatcatagcagctccgaaccccaattggattaacattgccccagta 18
>gb|CK114391.1|CK114391 X020H08 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X020H08 5', mRNA sequence
Length = 368
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 243 tgtcagtaaggagagagc 260
||||||||||||||||||
Sbjct: 134 tgtcagtaaggagagagc 151
>gb|CK114775.1|CK114775 X067G08 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X067G08 5', mRNA sequence
Length = 429
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 243 tgtcagtaaggagagagc 260
||||||||||||||||||
Sbjct: 194 tgtcagtaaggagagagc 211
>gb|CK114869.1|CK114869 X078H10 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X078H10 5', mRNA sequence
Length = 312
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 243 tgtcagtaaggagagagc 260
||||||||||||||||||
Sbjct: 45 tgtcagtaaggagagagc 62
>gb|CN518735.1|CN518735 GQ0102.B3_C05 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0102_C05 5', mRNA sequence
Length = 664
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 140 aactgagaaagaaaaaat 157
||||||||||||||||||
Sbjct: 9 aactgagaaagaaaaaat 26
>gb|AJ772039.1|AJ772039 AJ772039 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600014G07F1, mRNA sequence
Length = 348
Score = 36.2 bits (18), Expect = 3.7
Identities = 27/30 (90%)
Strand = Plus / Minus
Query: 725 aagttactgacaacacggccatcgtcaatg 754
||||| ||||||||||| ||||| ||||||
Sbjct: 198 aagttgctgacaacacgaccatcatcaatg 169
>gb|CV235467.1|CV235467 WS0122.B21_E07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0122_E07 3', mRNA sequence
Length = 650
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 140 aactgagaaagaaaaaat 157
||||||||||||||||||
Sbjct: 612 aactgagaaagaaaaaat 595
>gb|CV246788.1|CV246788 WS01111.B21_P05 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01111_P05 3', mRNA sequence
Length = 714
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 140 aactgagaaagaaaaaat 157
||||||||||||||||||
Sbjct: 674 aactgagaaagaaaaaat 657
>gb|CV247339.1|CV247339 WS01117.B21_N11 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01117_N11 3', mRNA sequence
Length = 757
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 140 aactgagaaagaaaaaat 157
||||||||||||||||||
Sbjct: 674 aactgagaaagaaaaaat 657
>gb|CV248186.1|CV248186 WS0112.B21_L14 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0112_L14 3', mRNA sequence
Length = 697
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 140 aactgagaaagaaaaaat 157
||||||||||||||||||
Sbjct: 674 aactgagaaagaaaaaat 657
>gb|CV249026.1|CV249026 WS01122.B21_M14 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01122_M14 3', mRNA sequence
Length = 704
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 140 aactgagaaagaaaaaat 157
||||||||||||||||||
Sbjct: 674 aactgagaaagaaaaaat 657
>gb|CV254223.1|CV254223 WS0224.B21_H05 PTxD-ICC-A-12 Populus trichocarpa x Populus deltoides
cDNA clone WS0224_H05 3', mRNA sequence
Length = 681
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1170 aatttcgtgaagtgaaca 1187
||||||||||||||||||
Sbjct: 552 aatttcgtgaagtgaaca 569
>gb|CV254772.1|CV254772 WS02411.B21_C06 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02411_C06 3', mRNA sequence
Length = 722
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 140 aactgagaaagaaaaaat 157
||||||||||||||||||
Sbjct: 643 aactgagaaagaaaaaat 626
>gb|CV256750.1|CV256750 WS0244.B21_L07 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0244_L07 3', mRNA sequence
Length = 673
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 140 aactgagaaagaaaaaat 157
||||||||||||||||||
Sbjct: 643 aactgagaaagaaaaaat 626
>gb|CV266169.1|CV266169 WS02029.B21_E16 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02029_E16 3', mRNA sequence
Length = 717
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 140 aactgagaaagaaaaaat 157
||||||||||||||||||
Sbjct: 677 aactgagaaagaaaaaat 660
>gb|DN491674.1|DN491674 V012G10.3pR Populus male catkins cDNA library Populus trichocarpa
cDNA clone V012G10 3', mRNA sequence
Length = 693
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 140 aactgagaaagaaaaaat 157
||||||||||||||||||
Sbjct: 648 aactgagaaagaaaaaat 631
>gb|DN501653.1|DN501653 V012G10.5pR Populus male catkins cDNA library Populus trichocarpa
cDNA clone V012G10 5', mRNA sequence
Length = 709
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 140 aactgagaaagaaaaaat 157
||||||||||||||||||
Sbjct: 46 aactgagaaagaaaaaat 63
>gb|DT471843.1|DT471843 WS0122.BR_E07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0122_E07 5', mRNA sequence
Length = 511
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 140 aactgagaaagaaaaaat 157
||||||||||||||||||
Sbjct: 46 aactgagaaagaaaaaat 63
>gb|DT488121.1|DT488121 WS02535.B21_J02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02535_J02 3', mRNA sequence
Length = 467
Score = 36.2 bits (18), Expect = 3.7
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 1109 ctttttcactttgttacattgc 1130
||||||||||||||| ||||||
Sbjct: 129 ctttttcactttgtttcattgc 108
>gb|DT489047.1|DT489047 WS02538.B21_C12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02538_C12 3', mRNA sequence
Length = 705
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 140 aactgagaaagaaaaaat 157
||||||||||||||||||
Sbjct: 674 aactgagaaagaaaaaat 657
>gb|DT491092.1|DT491092 WS02546.C21.1_M16 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02546_M16 3', mRNA sequence
Length = 701
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 140 aactgagaaagaaaaaat 157
||||||||||||||||||
Sbjct: 677 aactgagaaagaaaaaat 660
>gb|DT494239.1|DT494239 WS01117.BR_N11 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01117_N11 5', mRNA sequence
Length = 729
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 140 aactgagaaagaaaaaat 157
||||||||||||||||||
Sbjct: 56 aactgagaaagaaaaaat 73
>gb|DT495210.1|DT495210 WS0112.BR_L14 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0112_L14
5', mRNA sequence
Length = 588
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 140 aactgagaaagaaaaaat 157
||||||||||||||||||
Sbjct: 53 aactgagaaagaaaaaat 70
>gb|DT496221.1|DT496221 WS01122.BR_M14 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01122_M14 5', mRNA sequence
Length = 729
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 140 aactgagaaagaaaaaat 157
||||||||||||||||||
Sbjct: 56 aactgagaaagaaaaaat 73
>gb|AC149428.1| Populus trichocarpa clone Pop1-080J15, complete sequence
Length = 98246
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1242 tttgtgttgttgaaaatt 1259
||||||||||||||||||
Sbjct: 46294 tttgtgttgttgaaaatt 46311
>gb|AC149479.1| Populus trichocarpa clone Pop1-017N13, complete sequence
Length = 129742
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1242 tttgtgttgttgaaaatt 1259
||||||||||||||||||
Sbjct: 70916 tttgtgttgttgaaaatt 70933
>gb|AC149541.1| Populus trichocarpa clone Pop1-12C14, complete sequence
Length = 88772
Score = 36.2 bits (18), Expect = 3.7
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 33 tttataccatatatatga 50
||||||||||||||||||
Sbjct: 79667 tttataccatatatatga 79650
Database: Populus_nucl_with_EST.fasta
Posted date: May 2, 2006 3:31 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 165,899
Number of Sequences: 369679
Number of extensions: 165899
Number of successful extensions: 46827
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 46600
Number of HSP's gapped (non-prelim): 212
length of query: 1475
length of database: 203,408,664
effective HSP length: 19
effective length of query: 1456
effective length of database: 196,384,763
effective search space: 285936214928
effective search space used: 285936214928
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)