BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161284.2.6
(621 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU815790.1|BU815790 N046F06 Populus bark cDNA library Po... 151 4e-035
gb|CV230426.1|CV230426 WS01916.B21_I03 PT-DX-N-A-10 Populus... 147 6e-034
gb|CV231620.1|CV231620 WS0195.B21_B08 PT-DX-N-A-10 Populus ... 147 6e-034
gb|CV276134.1|CV276134 WS0178.B21.1_M03 PTxD-NR-A-8 Populus... 147 6e-034
gb|CX174086.1|CX174086 E08_69-102_10.ab1 leaf inoculated wi... 147 6e-034
gb|BU830565.1|BU830565 T010B04 Populus apical shoot cDNA li... 143 9e-033
gb|BU867388.1|BU867388 S077F01 Populus imbibed seed cDNA li... 143 9e-033
gb|BU868960.1|BU868960 M124C06 Populus flower cDNA library ... 143 9e-033
gb|BU881773.1|BU881773 UM67TC12 Populus flower cDNA library... 143 9e-033
gb|CV230525.1|CV230525 WS01916.B21_N05 PT-DX-N-A-10 Populus... 143 9e-033
gb|CV243040.1|CV243040 WS02516.B21.1_L18 PT-MB-N-A-15 Popul... 143 9e-033
gb|CV256627.1|CV256627 WS0244.B21_G01 PTxD-ICC-N-A-14 Popul... 143 9e-033
gb|CX173750.1|CX173750 G12_69-62_14.ab1 leaf inoculated wit... 143 9e-033
gb|DT475287.1|DT475287 WS0126.BR_K07 PT-GT-FL-A-3 Populus t... 143 9e-033
gb|DT505524.1|DT505524 WS01811.C21_C14 PTxD-IL-N-A-9 Populu... 143 9e-033
gb|CV130803.1|CV130803 X9SP04d12 Populus stem seasonal libr... 139 1e-031
gb|CV284019.1|CV284019 WS0188.B21_O17 PTxD-IL-N-A-9 Populus... 137 6e-031
gb|BU868768.1|BU868768 M120H07 Populus flower cDNA library ... 135 2e-030
gb|BU887273.1|BU887273 R057BC04 Populus root cDNA library P... 135 2e-030
gb|CK100477.1|CK100477 C037P06.5pR Populus strain T89 leave... 135 2e-030
gb|CK112329.1|CK112329 R057C04 Populus root cDNA library Po... 135 2e-030
gb|CV247080.1|CV247080 WS01116.B21_P02 PT-P-FL-A-2 Populus ... 135 2e-030
gb|CV249435.1|CV249435 WS01124.B21_C09 PT-P-FL-A-2 Populus ... 135 2e-030
gb|CV254507.1|CV254507 WS0241.B21_G18 PTxD-ICC-N-A-14 Popul... 135 2e-030
gb|CV255065.1|CV255065 WS02411.B21_P10 PTxD-ICC-N-A-14 Popu... 135 2e-030
gb|CV266673.1|CV266673 WS0203.B21_K15 PTxN-IB-N-A-11 Populu... 135 2e-030
gb|CV268050.1|CV268050 WS0204.B21_G17 PTxN-IB-N-A-11 Populu... 135 2e-030
gb|CV269997.1|CV269997 WS0209.B21_M21 PTxN-IB-N-A-11 Populu... 135 2e-030
gb|CX179617.1|CX179617 G03_45-114_13.ab1 leaf inoculated wi... 135 2e-030
gb|DN484899.1|DN484899 K034P82.3pR Populus apical shoot cDN... 135 2e-030
gb|DT493944.1|DT493944 WS01116.BR_P02 PT-P-FL-A-2 Populus t... 135 2e-030
gb|DT496683.1|DT496683 WS01124.BR_C09 PT-P-FL-A-2 Populus t... 135 2e-030
gb|DT509011.1|DT509011 WS02422.BR_I19 PTxD-ICC-N-A-14 Popul... 135 2e-030
gb|DT513621.1|DT513621 WS02422.B21_I19 PTxD-ICC-N-A-14 Popu... 135 2e-030
gb|BI070389.1|BI070389 C037P06U Populus strain T89 leaves P... 133 9e-030
gb|CF236267.1|CF236267 PtaJXT10G10G1014 Poplar cDNA library... 131 3e-029
gb|BU829956.1|BU829956 T002B11 Populus apical shoot cDNA li... 129 1e-028
gb|BU892984.1|BU892984 P071H05 Populus petioles cDNA librar... 129 1e-028
gb|BU832159.1|BU832159 T030B01 Populus apical shoot cDNA li... 127 5e-028
gb|CX172583.1|CX172583 H04_69-45_16.ab1 leaf inoculated wit... 127 5e-028
gb|BU892421.1|BU892421 P063D02 Populus petioles cDNA librar... 119 1e-025
gb|BU893720.1|BU893720 P081E04 Populus petioles cDNA librar... 119 1e-025
gb|DN484898.1|DN484898 K034P58.3pR Populus apical shoot cDN... 101 3e-020
gb|CV281298.1|CV281298 WS0181.B21_I21 PTxD-IL-N-A-9 Populus... 100 1e-019
gb|CV276600.1|CV276600 WS0141.B21_E10 PTxD-IL-A-5 Populus t... 98 5e-019
gb|DT488265.1|DT488265 WS02535.B21_P07 PT-MB-N-A-15 Populus... 92 3e-017
gb|DT526007.1|DT526007 WS02046.C21_O01 PTxN-IB-N-A-11 Popul... 82 3e-014
gb|BU836212.1|BU836212 T084A01 Populus apical shoot cDNA li... 78 4e-013
gb|BU868970.1|BU868970 M124D06 Populus flower cDNA library ... 74 7e-012
gb|AJ776704.1|AJ776704 AJ776704 Populus euphratica root 3-6... 70 1e-010
gb|CV276985.1|CV276985 WS0142.B21_F13 PTxD-IL-A-5 Populus t... 68 4e-010
gb|AJ772986.1|AJ772986 AJ772986 Populus euphratica leaf 3-6... 58 4e-007
gb|CV269341.1|CV269341 WS0208.B21_A01 PTxN-IB-N-A-11 Populu... 52 3e-005
gb|DT469488.1|DT469488 WS01917.C21_P02 PT-DX-N-A-10 Populus... 52 3e-005
gb|CB239612.1|CB239612 RSH14D01 two-month-old roots from cl... 46 0.002
gb|CF119260.1|CF119260 MTU10CS.P15.E09 Aspen stem cDNA Libr... 44 0.006
gb|AJ772174.1|AJ772174 AJ772174 Populus euphratica shoot in... 38 0.39
gb|AJ770035.1|AJ770035 AJ770035 Populus euphratica leaf 3-6... 38 0.39
gb|DN494375.1|DN494375 K034P82.5pR Populus apical shoot cDN... 38 0.39
>gb|BU815790.1|BU815790 N046F06 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 240
Score = 151 bits (76), Expect = 4e-035
Identities = 172/204 (84%)
Strand = Plus / Minus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
||||||||||| || ||||| |||||||| || || || ||||| |||| ||||| |||
Sbjct: 230 acaacactgttgcctctgatcaccaccatgcctatgtcagttttctcatcaccattcacc 171
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| ||||||| ||||||||||||||| |||||||| ||||| ||||
Sbjct: 170 tccacagtgttgtcgaccaccaaattcatgaactggtcaaacccacggagtgttccgacc 111
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||| ||||||||||||||||||||
Sbjct: 110 accatcctatttgcattcagcttgatttgaagcttcttatccatgtacttcttgagatct 51
Query: 459 ggaggctgccccgagcggctcatg 482
|| |||||||| || | |||||||
Sbjct: 50 ggtggctgcccggatctgctcatg 27
>gb|CV230426.1|CV230426 WS01916.B21_I03 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01916_I03 3', mRNA sequence
Length = 525
Score = 147 bits (74), Expect = 6e-034
Identities = 164/194 (84%)
Strand = Plus / Plus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||||| || || || ||||| |||| ||||| |||
Sbjct: 259 acaacactattgcctctgatcaccaccatgcctatgtcggttttctcatcaccattcacc 318
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| ||||||| ||||||||||||||| |||||||| ||||| ||||
Sbjct: 319 tccacagtgttgtcaaccaccaaattcatgaactggtcaaacccacggagtgttccgacc 378
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||| ||||||||||||||||||||
Sbjct: 379 accatcctatttgcattcagcttgatttgaagcttcttatccatgtacttcttgagatct 438
Query: 459 ggaggctgccccga 472
|| |||||||||||
Sbjct: 439 ggtggctgccccga 452
>gb|CV231620.1|CV231620 WS0195.B21_B08 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0195_B08 3', mRNA sequence
Length = 516
Score = 147 bits (74), Expect = 6e-034
Identities = 164/194 (84%)
Strand = Plus / Plus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||||| || || || ||||| |||| ||||| |||
Sbjct: 252 acaacactattgcctctgatcaccaccatgcctatgtcggttttctcatcaccattcacc 311
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| ||||||| ||||||||||||||| |||||||| ||||| ||||
Sbjct: 312 tccacagtgttgtcaaccaccaaattcatgaactggtcaaacccacggagtgttccgacc 371
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||| ||||||||||||||||||||
Sbjct: 372 accatcctatttgcattcagcttgatttgaagcttcttatccatgtacttcttgagatct 431
Query: 459 ggaggctgccccga 472
|| |||||||||||
Sbjct: 432 ggtggctgccccga 445
>gb|CV276134.1|CV276134 WS0178.B21.1_M03 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0178_M03 3', mRNA sequence
Length = 578
Score = 147 bits (74), Expect = 6e-034
Identities = 164/194 (84%)
Strand = Plus / Plus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||||| || || || ||||| |||| ||||| |||
Sbjct: 325 acaacactattgcctctgatcaccaccatgcctatgtcggttttctcatcaccattcacc 384
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| ||||||| ||||||||||||||| |||||||| ||||| ||||
Sbjct: 385 tccacagtgttgtcaaccaccaaattcatgaactggtcaaacccacggagtgttccgacc 444
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||| ||||||||||||||||||||
Sbjct: 445 accatcctatttgcattcagcttgatttgaagcttcttatccatgtacttcttgagatct 504
Query: 459 ggaggctgccccga 472
|| |||||||||||
Sbjct: 505 ggtggctgccccga 518
>gb|CX174086.1|CX174086 E08_69-102_10.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 450
Score = 147 bits (74), Expect = 6e-034
Identities = 164/194 (84%)
Strand = Plus / Minus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||||| || || || ||||| |||| ||||| |||
Sbjct: 249 acaacactattgcctctgatcaccaccatgcctatgtcggttttctcatcaccattcacc 190
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| ||||||| ||||||||||||||| |||||||| ||||| ||||
Sbjct: 189 tccacagtgttgtcaaccaccaaattcatgaactggtcaaacccacggagtgttccgacc 130
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||| ||||||||||||||||||||
Sbjct: 129 accatcctatttgcattcagcttgatttgaagcttcttatccatgtacttcttgagatct 70
Query: 459 ggaggctgccccga 472
|| |||||||||||
Sbjct: 69 ggtggctgccccga 56
>gb|BU830565.1|BU830565 T010B04 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 401
Score = 143 bits (72), Expect = 9e-033
Identities = 171/204 (83%)
Strand = Plus / Minus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
||||||||||| || ||||| |||||||| || || || ||||| || | ||||| |||
Sbjct: 230 acaacactgttgcctctgatcaccaccatgcctatgtcagttttctcgtcaccattcacc 171
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| ||||||| ||||||||||||||| |||||||| ||||| ||||
Sbjct: 170 tccacagtgttgtcgaccaccaaattcatgaactggtcaaacccacggagtgttccgacc 111
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||| ||||||||||||||||||||
Sbjct: 110 accatcctatttgcattcagcttgatttgaagcttcttatccatgtacttcttgagatct 51
Query: 459 ggaggctgccccgagcggctcatg 482
|| |||||||| || | |||||||
Sbjct: 50 ggtggctgcccggatctgctcatg 27
>gb|BU867388.1|BU867388 S077F01 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 465
Score = 143 bits (72), Expect = 9e-033
Identities = 171/204 (83%)
Strand = Plus / Minus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||||| || || || ||||| |||| ||||| |||
Sbjct: 289 acaacactattgcctctgatcaccaccatgcctatgtcagttttctcatcaccattcacc 230
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| ||||||| ||||||||||||||| |||||||| ||||| ||||
Sbjct: 229 tccacagtgttgtcgaccaccaaattcatgaactggtcaaacccacggagtgttccgacc 170
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||| ||||||||||||||||||||
Sbjct: 169 accatcctatttgcattcagcttgatttgaagcttcttatccatgtacttcttgagatct 110
Query: 459 ggaggctgccccgagcggctcatg 482
|| |||||||| || | |||||||
Sbjct: 109 ggtggctgcccggatctgctcatg 86
>gb|BU868960.1|BU868960 M124C06 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 564
Score = 143 bits (72), Expect = 9e-033
Identities = 171/204 (83%)
Strand = Plus / Minus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||||| || || || ||||| |||| ||||| ||
Sbjct: 264 acaacactattgcctctgatcaccaccatgcctatgtcagttttctcatcaccattcacg 205
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| ||||||| ||||||||||||||| |||||||| ||||| ||||
Sbjct: 204 tccacagtgttgtcaaccaccaaattcatgaactggtcaaacccacggagtgttccgacc 145
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||| ||||||||||||||||||||
Sbjct: 144 accatcctatttgcattcagcttgatttgaagcttcttatccatgtacttcttgagatct 85
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||||||||| | |||||||
Sbjct: 84 ggtggctgccccgatctgctcatg 61
>gb|BU881773.1|BU881773 UM67TC12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 457
Score = 143 bits (72), Expect = 9e-033
Identities = 171/204 (83%)
Strand = Plus / Minus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||||| || || || ||||| |||| ||||| ||
Sbjct: 287 acaacactattgcctctgatcaccaccatgcctatgtcagttttctcatcaccattcacg 228
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| ||||||| ||||||||||||||| |||||||| ||||| ||||
Sbjct: 227 tccacagtgttgtcaaccaccaaattcatgaactggtcaaacccacggagtgttccgacc 168
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||| ||||||||||||||||||||
Sbjct: 167 accatcctatttgcattcagcttgatttgaagcttcttatccatgtacttcttgagatct 108
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||||||||| | |||||||
Sbjct: 107 ggtggctgccccgatctgctcatg 84
>gb|CV230525.1|CV230525 WS01916.B21_N05 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01916_N05 3', mRNA sequence
Length = 430
Score = 143 bits (72), Expect = 9e-033
Identities = 171/204 (83%)
Strand = Plus / Minus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||||| || || || ||||| |||| ||||| ||
Sbjct: 268 acaacactattgcctctgatcaccaccatgcctatgtcagttttctcatcaccattcacg 209
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| ||||||| ||||||||||||||| |||||||| ||||| ||||
Sbjct: 208 tccacagtgttgtcaaccaccaaattcatgaactggtcaaacccacggagtgttccgacc 149
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||| ||||||||||||||||||||
Sbjct: 148 accatcctatttgcattcagcttgatttgaagcttcttatccatgtacttcttgagatct 89
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||||||||| | |||||||
Sbjct: 88 ggtggctgccccgatctgctcatg 65
>gb|CV243040.1|CV243040 WS02516.B21.1_L18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02516_L18 3', mRNA sequence
Length = 461
Score = 143 bits (72), Expect = 9e-033
Identities = 171/204 (83%)
Strand = Plus / Plus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||||| || || || ||||| |||| ||||| ||
Sbjct: 186 acaacactattgcctctgatcaccaccatgcctatgtcagttttctcatcaccattcacg 245
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| ||||||| ||||||||||||||| |||||||| ||||| ||||
Sbjct: 246 tccacagtgttgtcaaccaccaaattcatgaactggtcaaacccacggagtgttccgacc 305
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||| ||||||||||||||||||||
Sbjct: 306 accatcctatttgcattcagcttgatttgaagcttcttatccatgtacttcttgagatct 365
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||||||||| | |||||||
Sbjct: 366 ggtggctgccccgatctgctcatg 389
>gb|CV256627.1|CV256627 WS0244.B21_G01 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0244_G01 3', mRNA sequence
Length = 452
Score = 143 bits (72), Expect = 9e-033
Identities = 171/204 (83%)
Strand = Plus / Plus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||||| || || || ||||| |||| ||||| ||
Sbjct: 197 acaacactattgcctctgatcaccaccatgcctatgtcagttttctcatcaccattcacg 256
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| ||||||| ||||||||||||||| |||||||| ||||| ||||
Sbjct: 257 tccacagtgttgtcaaccaccaaattcatgaactggtcaaacccacggagtgttccgacc 316
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||| ||||||||||||||||||||
Sbjct: 317 accatcctatttgcattcagcttgatttgaagcttcttatccatgtacttcttgagatct 376
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||||||||| | |||||||
Sbjct: 377 ggtggctgccccgatctgctcatg 400
>gb|CX173750.1|CX173750 G12_69-62_14.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 508
Score = 143 bits (72), Expect = 9e-033
Identities = 171/204 (83%)
Strand = Plus / Minus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || |||| |||||||| || ||||| ||||| |||| ||||| |||
Sbjct: 284 acaacactattgcctctgagcaccaccatgcctatatcagttttctcatcaccattcacc 225
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| || || | ||||||||||||||| |||||||||||||| || |
Sbjct: 224 tccacagtgttgtcaacaactaaattcatgaactggtcaaacccacgaagtgttccaacc 165
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||||||||||||||||||||||||
Sbjct: 164 accatcctatttgcattcagcttgatttgaagcttcttgtccatgtacttcttgagatct 105
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||| ||||| |||||||||
Sbjct: 104 ggtggctgacccgatcggctcatg 81
>gb|DT475287.1|DT475287 WS0126.BR_K07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0126_K07 5', mRNA sequence
Length = 464
Score = 143 bits (72), Expect = 9e-033
Identities = 171/204 (83%)
Strand = Plus / Minus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||||| || || || ||||| |||| ||||| ||
Sbjct: 287 acaacactattgcctctgatcaccaccatgcctatgtcagttttctcatcaccattcacg 228
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| ||||||| ||||||||||||||| |||||||| ||||| ||||
Sbjct: 227 tccacagtgttgtcaaccaccaaattcatgaactggtcaaacccacggagtgttccgacc 168
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||| ||||||||||||||||||||
Sbjct: 167 accatcctatttgcattcagcttgatttgaagcttcttatccatgtacttcttgagatct 108
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||||||||| | |||||||
Sbjct: 107 ggtggctgccccgatctgctcatg 84
>gb|DT505524.1|DT505524 WS01811.C21_C14 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS01811_C14 3', mRNA sequence
Length = 480
Score = 143 bits (72), Expect = 9e-033
Identities = 171/204 (83%)
Strand = Plus / Plus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||||| || || || ||||| |||| ||||| ||
Sbjct: 201 acaacactattgcctctgatcaccaccatgcctatgtcagttttctcatcaccattcacg 260
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| ||||||| ||||||||||||||| |||||||| ||||| ||||
Sbjct: 261 tccacagtgttgtcaaccaccaaattcatgaactggtcaaacccacggagtgttccgacc 320
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||| ||||||||||||||||||||
Sbjct: 321 accatcctatttgcattcagcttgatttgaagcttcttatccatgtacttcttgagatct 380
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||||||||| | |||||||
Sbjct: 381 ggtggctgccccgatctgctcatg 404
>gb|CV130803.1|CV130803 X9SP04d12 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 476
Score = 139 bits (70), Expect = 1e-031
Identities = 163/194 (84%)
Strand = Plus / Minus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||||| || || || ||||| |||| ||||| |||
Sbjct: 243 acaacactattgcctctgatcaccaccatgcctatgtcggttttctcatcaccattcacc 184
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
||||| |||||||| ||||||| ||||||||||||||| |||||||| ||||| ||||
Sbjct: 183 tccacggtgttgtcaaccaccaaattcatgaactggtcaaacccacggagtgttccgacc 124
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||| ||||||||||||||||||||
Sbjct: 123 accatcctatttgcattcagcttgatttgaagcttcttatccatgtacttcttgagatct 64
Query: 459 ggaggctgccccga 472
|| |||||||||||
Sbjct: 63 ggtggctgccccga 50
>gb|CV284019.1|CV284019 WS0188.B21_O17 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0188_O17 3', mRNA sequence
Length = 568
Score = 137 bits (69), Expect = 6e-031
Identities = 147/173 (84%)
Strand = Plus / Plus
Query: 300 accaccattccaatatctgttttgtcatttccattgacctccacagtgttgtccaccacc 359
|||||||| || || || ||||| |||| ||||| ||||||||||||||||| ||||||
Sbjct: 313 accaccatgcctatgtcggttttctcatcaccattcacctccacagtgttgtcaaccacc 372
Query: 360 agattcatgaactggtcgaacccacgaagtgtgccgataacaacacggtttgcattcatc 419
| ||||||||||||||| |||||||| ||||| |||| || | | |||||||||| |
Sbjct: 373 aaattcatgaactggtcaaacccacggagtgttccgaccaccatcctatttgcattcagc 432
Query: 420 ttaatctgaagcttcttgtccatgtacttcttgagatccggaggctgccccga 472
|| || ||||||||||| |||||||||||||||||||| || |||||||||||
Sbjct: 433 ttgatttgaagcttcttatccatgtacttcttgagatctggtggctgccccga 485
>gb|BU868768.1|BU868768 M120H07 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 386
Score = 135 bits (68), Expect = 2e-030
Identities = 170/204 (83%)
Strand = Plus / Minus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || |||| |||||||| || ||||| ||||| |||| ||||| |||
Sbjct: 269 acaacactattgcctctgagcaccaccatgcctatatcagttttctcatcaccattcacc 210
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| || || | ||||||||||||||| |||||||||||||| || |
Sbjct: 209 tccacagtgttgtcaacaactaaattcatgaactggtcaaacccacgaagtgttccaacc 150
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||||||||| ||||||||||||||
Sbjct: 149 accatcctatttgcattcagcttgatttgaagcttcttgtccatatacttcttgagatct 90
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||| ||||| |||||||||
Sbjct: 89 ggtggctgacccgatcggctcatg 66
>gb|BU887273.1|BU887273 R057BC04 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 587
Score = 135 bits (68), Expect = 2e-030
Identities = 170/204 (83%)
Strand = Plus / Minus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||||| || ||||| ||||| |||| ||||| |||
Sbjct: 247 acaacactattgcctctgatcaccaccatgcctatatcagttttctcatcaccattcacc 188
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| || || | ||||||||||||||| ||||| |||||||| || |
Sbjct: 187 tccacagtgttgtcaacaactaaattcatgaactggtcaaacccgcgaagtgttccaacc 128
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||||||||| ||||||||||||||
Sbjct: 127 accatcctatttgcattcagcttgatttgaagcttcttgtccatatacttcttgagatct 68
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||| ||||| |||||||||
Sbjct: 67 ggtggctgacccgatcggctcatg 44
>gb|CK100477.1|CK100477 C037P06.5pR Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA clone C037P06 5', mRNA sequence
Length = 422
Score = 135 bits (68), Expect = 2e-030
Identities = 170/204 (83%)
Strand = Plus / Minus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||||| || ||||| ||||| |||| ||||| |||
Sbjct: 238 acaacactattgcctctgatcaccaccatgcctatatcagttttctcatcaccattcacc 179
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| || || | ||||||||||||||| ||||| |||||||| || |
Sbjct: 178 tccacagtgttgtcaacaactaaattcatgaactggtcaaacccgcgaagtgttccaacc 119
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||||||||| ||||||||||||||
Sbjct: 118 accatcctatttgcattcagcttgatttgaagcttcttgtccatatacttcttgagatct 59
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||| ||||| |||||||||
Sbjct: 58 ggtggctgacccgatcggctcatg 35
>gb|CK112329.1|CK112329 R057C04 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R057C04 5', mRNA sequence
Length = 619
Score = 135 bits (68), Expect = 2e-030
Identities = 170/204 (83%)
Strand = Plus / Minus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||||| || ||||| ||||| |||| ||||| |||
Sbjct: 267 acaacactattgcctctgatcaccaccatgcctatatcagttttctcatcaccattcacc 208
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| || || | ||||||||||||||| ||||| |||||||| || |
Sbjct: 207 tccacagtgttgtcaacaactaaattcatgaactggtcaaacccgcgaagtgttccaacc 148
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||||||||| ||||||||||||||
Sbjct: 147 accatcctatttgcattcagcttgatttgaagcttcttgtccatatacttcttgagatct 88
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||| ||||| |||||||||
Sbjct: 87 ggtggctgacccgatcggctcatg 64
>gb|CV247080.1|CV247080 WS01116.B21_P02 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01116_P02 3', mRNA sequence
Length = 530
Score = 135 bits (68), Expect = 2e-030
Identities = 170/204 (83%)
Strand = Plus / Plus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || |||| |||||||| || ||||| ||||| |||| ||||| |||
Sbjct: 193 acaacactattgcctctgagcaccaccatgcctatatcagttttctcatcaccattcacc 252
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| || || | ||||||||||||||| |||||||||||||| || |
Sbjct: 253 tccacagtgttgtcaacaactaaattcatgaactggtcaaacccacgaagtgttccaacc 312
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||||||||| ||||||||||||||
Sbjct: 313 accatcctatttgcattcagcttgatttgaagcttcttgtccatatacttcttgagatct 372
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||| ||||| |||||||||
Sbjct: 373 ggtggctgacccgatcggctcatg 396
>gb|CV249435.1|CV249435 WS01124.B21_C09 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01124_C09 3', mRNA sequence
Length = 422
Score = 135 bits (68), Expect = 2e-030
Identities = 170/204 (83%)
Strand = Plus / Plus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || |||| |||||||| || ||||| ||||| |||| ||||| |||
Sbjct: 179 acaacactattgcctctgagcaccaccatgcctatatcagttttctcatcaccattcacc 238
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| || || | ||||||||||||||| |||||||||||||| || |
Sbjct: 239 tccacagtgttgtcaacaactaaattcatgaactggtcaaacccacgaagtgttccaacc 298
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||||||||| ||||||||||||||
Sbjct: 299 accatcctatttgcattcagcttgatttgaagcttcttgtccatatacttcttgagatct 358
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||| ||||| |||||||||
Sbjct: 359 ggtggctgacccgatcggctcatg 382
>gb|CV254507.1|CV254507 WS0241.B21_G18 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0241_G18 3', mRNA sequence
Length = 454
Score = 135 bits (68), Expect = 2e-030
Identities = 170/204 (83%)
Strand = Plus / Plus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || |||| |||||||| || ||||| ||||| |||| ||||| |||
Sbjct: 216 acaacactattgcctctgagcaccaccatgcctatatcagttttctcatcaccattcacc 275
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| || || | ||||||||||||||| |||||||||||||| || |
Sbjct: 276 tccacagtgttgtcaacaactaaattcatgaactggtcaaacccacgaagtgttccaacc 335
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||||||||| ||||||||||||||
Sbjct: 336 accatcctatttgcattcagcttgatttgaagcttcttgtccatatacttcttgagatct 395
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||| ||||| |||||||||
Sbjct: 396 ggtggctgacccgatcggctcatg 419
>gb|CV255065.1|CV255065 WS02411.B21_P10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02411_P10 3', mRNA sequence
Length = 557
Score = 135 bits (68), Expect = 2e-030
Identities = 170/204 (83%)
Strand = Plus / Plus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || |||| |||||||| || ||||| ||||| |||| ||||| |||
Sbjct: 217 acaacactattgcctctgagcaccaccatgcctatatcagttttctcatcaccattcacc 276
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| || || | ||||||||||||||| |||||||||||||| || |
Sbjct: 277 tccacagtgttgtcaacaactaaattcatgaactggtcaaacccacgaagtgttccaacc 336
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||||||||| ||||||||||||||
Sbjct: 337 accatcctatttgcattcagcttgatttgaagcttcttgtccatatacttcttgagatct 396
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||| ||||| |||||||||
Sbjct: 397 ggtggctgacccgatcggctcatg 420
>gb|CV266673.1|CV266673 WS0203.B21_K15 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0203_K15 3', mRNA sequence
Length = 555
Score = 135 bits (68), Expect = 2e-030
Identities = 170/204 (83%)
Strand = Plus / Plus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || |||| |||||||| || ||||| ||||| |||| ||||| |||
Sbjct: 243 acaacactattgcctctgagcaccaccatgcctatatcagttttctcatcaccattcacc 302
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| || || | ||||||||||||||| |||||||||||||| || |
Sbjct: 303 tccacagtgttgtcaacaactaaattcatgaactggtcaaacccacgaagtgttccaacc 362
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||||||||| ||||||||||||||
Sbjct: 363 accatcctatttgcattcagcttgatttgaagcttcttgtccatatacttcttgagatct 422
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||| ||||| |||||||||
Sbjct: 423 ggtggctgacccgatcggctcatg 446
>gb|CV268050.1|CV268050 WS0204.B21_G17 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0204_G17 3', mRNA sequence
Length = 467
Score = 135 bits (68), Expect = 2e-030
Identities = 170/204 (83%)
Strand = Plus / Plus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||||| || || || | ||| |||| ||||| |||
Sbjct: 197 acaacactattgcctctgatcaccaccatgcctatgtcggctttctcatcaccattcacc 256
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
||||| |||||||| ||||||| ||||||||||||||| |||||||| ||||| ||||
Sbjct: 257 tccacggtgttgtcaaccaccaaattcatgaactggtcaaacccacggagtgttccgacc 316
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||| ||||||||||||||||||||
Sbjct: 317 accatcctatttgcattcagcttgatttgaagcttcttatccatgtacttcttgagatct 376
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||||||||| | |||||||
Sbjct: 377 ggtggctgccccgatctgctcatg 400
>gb|CV269997.1|CV269997 WS0209.B21_M21 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0209_M21 3', mRNA sequence
Length = 545
Score = 135 bits (68), Expect = 2e-030
Identities = 170/204 (83%)
Strand = Plus / Plus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || |||| |||||||| || ||||| ||||| |||| ||||| |||
Sbjct: 242 acaacactattgcctctgagcaccaccatgcctatatcagttttctcatcaccattcacc 301
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| || || | ||||||||||||||| |||||||||||||| || |
Sbjct: 302 tccacagtgttgtcaacaactaaattcatgaactggtcaaacccacgaagtgttccaacc 361
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||||||||| ||||||||||||||
Sbjct: 362 accatcctatttgcattcagcttgatttgaagcttcttgtccatatacttcttgagatct 421
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||| ||||| |||||||||
Sbjct: 422 ggtggctgacccgatcggctcatg 445
>gb|CX179617.1|CX179617 G03_45-114_13.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 527
Score = 135 bits (68), Expect = 2e-030
Identities = 161/192 (83%)
Strand = Plus / Minus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||||| || || || ||||| |||| ||||| |||
Sbjct: 201 acaacactattgcctctgatcaccaccatgcctatgtcggttttctcatcaccattcacc 142
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
||||| |||||||| ||||||| ||||||||||||||| |||||||| ||||| ||||
Sbjct: 141 tccacggtgttgtcaaccaccaaattcatgaactggtcaaacccacggagtgttccgacc 82
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||| ||||||||||||||||||||
Sbjct: 81 accatcctatttgcattcagcttgatttgaagcttcttatccatgtacttcttgagatct 22
Query: 459 ggaggctgcccc 470
|| |||||||||
Sbjct: 21 ggtggctgcccc 10
>gb|DN484899.1|DN484899 K034P82.3pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone K034P82 3', mRNA sequence
Length = 525
Score = 135 bits (68), Expect = 2e-030
Identities = 170/204 (83%)
Strand = Plus / Plus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
||||||||||| || ||||| |||||||| || || || ||||| || | ||||| |||
Sbjct: 299 acaacactgttgcctctgatcaccaccatgcctatgtcagttttctcgtcaccattcacc 358
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| ||||||| ||||||||||||||| |||||||| ||||| ||||
Sbjct: 359 tccacagtgttgtcgaccaccaaattcatgaactggtcaaacccacggagtgttccgacc 418
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || |||||||||| ||||||||||||||||||||
Sbjct: 419 accatcctatttgcattcagcttgattagaagcttcttatccatgtacttcttgagatct 478
Query: 459 ggaggctgccccgagcggctcatg 482
|| |||||||| || | |||||||
Sbjct: 479 ggtggctgcccggatctgctcatg 502
>gb|DT493944.1|DT493944 WS01116.BR_P02 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01116_P02 5', mRNA sequence
Length = 496
Score = 135 bits (68), Expect = 2e-030
Identities = 170/204 (83%)
Strand = Plus / Minus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || |||| |||||||| || ||||| ||||| |||| ||||| |||
Sbjct: 304 acaacactattgcctctgagcaccaccatgcctatatcagttttctcatcaccattcacc 245
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| || || | ||||||||||||||| |||||||||||||| || |
Sbjct: 244 tccacagtgttgtcaacaactaaattcatgaactggtcaaacccacgaagtgttccaacc 185
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||||||||| ||||||||||||||
Sbjct: 184 accatcctatttgcattcagcttgatttgaagcttcttgtccatatacttcttgagatct 125
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||| ||||| |||||||||
Sbjct: 124 ggtggctgacccgatcggctcatg 101
>gb|DT496683.1|DT496683 WS01124.BR_C09 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01124_C09 5', mRNA sequence
Length = 438
Score = 135 bits (68), Expect = 2e-030
Identities = 170/204 (83%)
Strand = Plus / Minus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || |||| |||||||| || ||||| ||||| |||| ||||| |||
Sbjct: 260 acaacactattgcctctgagcaccaccatgcctatatcagttttctcatcaccattcacc 201
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| || || | ||||||||||||||| |||||||||||||| || |
Sbjct: 200 tccacagtgttgtcaacaactaaattcatgaactggtcaaacccacgaagtgttccaacc 141
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||||||||| ||||||||||||||
Sbjct: 140 accatcctatttgcattcagcttgatttgaagcttcttgtccatatacttcttgagatct 81
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||| ||||| |||||||||
Sbjct: 80 ggtggctgacccgatcggctcatg 57
>gb|DT509011.1|DT509011 WS02422.BR_I19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_I19 5', mRNA sequence
Length = 517
Score = 135 bits (68), Expect = 2e-030
Identities = 170/204 (83%)
Strand = Plus / Minus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || |||| |||||||| || ||||| ||||| |||| ||||| |||
Sbjct: 323 acaacactattgcctctgagcaccaccatgcctatatcagttttctcatcaccattcacc 264
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| || || | ||||||||||||||| |||||||||||||| || |
Sbjct: 263 tccacagtgttgtcaacaactaaattcatgaactggtcaaacccacgaagtgttccaacc 204
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||||||||| ||||||||||||||
Sbjct: 203 accatcctatttgcattcagcttgatttgaagcttcttgtccatatacttcttgagatct 144
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||| ||||| |||||||||
Sbjct: 143 ggtggctgacccgatcggctcatg 120
>gb|DT513621.1|DT513621 WS02422.B21_I19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_I19 3', mRNA sequence
Length = 517
Score = 135 bits (68), Expect = 2e-030
Identities = 170/204 (83%)
Strand = Plus / Plus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || |||| |||||||| || ||||| ||||| |||| ||||| |||
Sbjct: 195 acaacactattgcctctgagcaccaccatgcctatatcagttttctcatcaccattcacc 254
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| || || | ||||||||||||||| |||||||||||||| || |
Sbjct: 255 tccacagtgttgtcaacaactaaattcatgaactggtcaaacccacgaagtgttccaacc 314
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||||||||| ||||||||||||||
Sbjct: 315 accatcctatttgcattcagcttgatttgaagcttcttgtccatatacttcttgagatct 374
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||| ||||| |||||||||
Sbjct: 375 ggtggctgacccgatcggctcatg 398
>gb|BI070389.1|BI070389 C037P06U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 414
Score = 133 bits (67), Expect = 9e-030
Identities = 169/203 (83%)
Strand = Plus / Minus
Query: 280 caacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacct 339
||||||| || || ||||| |||||||| || ||||| ||||| |||| ||||| ||||
Sbjct: 237 caacactattgcctctgatcaccaccatgcctatatcagttttctcatcaccattcacct 178
Query: 340 ccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgataa 399
||||||||||||| || || | ||||||||||||||| ||||| |||||||| || | |
Sbjct: 177 ccacagtgttgtcaacaactaaattcatgaactggtcaaacccgcgaagtgttccaacca 118
Query: 400 caacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatccg 459
| | | |||||||||| ||| || ||||||||||||||||| |||||||||||||| |
Sbjct: 117 ccatcctatttgcattcagcttgatttgaagcttcttgtccatatacttcttgagatctg 58
Query: 460 gaggctgccccgagcggctcatg 482
| ||||| ||||| |||||||||
Sbjct: 57 gtggctgacccgatcggctcatg 35
>gb|CF236267.1|CF236267 PtaJXT10G10G1014 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 391
Score = 131 bits (66), Expect = 3e-029
Identities = 173/206 (83%), Gaps = 2/206 (0%)
Strand = Plus / Minus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
||||||||||| || ||||| |||||||| || || || ||||| |||| ||||| |||
Sbjct: 220 acaacactgttgcctctgatcaccaccatgcctatgtcagttttctcatcaccattcacc 161
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| ||||||| ||||||||||||||| |||||||| ||||| ||||
Sbjct: 160 tccacagtgttgtcgaccaccaaattcatgaactggtcaaacccacggagtgttccgacc 101
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgt-ccatgtacttcttgagatc 457
|| | | |||||||||| ||| || ||||||||||| | |||||||||||||||||||
Sbjct: 100 accatcctatttgcattcagcttgatttgaagcttcttatcccatgtacttcttgagatc 41
Query: 458 c-ggaggctgccccgagcggctcatg 482
| || |||||||| || | |||||||
Sbjct: 40 ctggtggctgcccggatctgctcatg 15
>gb|BU829956.1|BU829956 T002B11 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 495
Score = 129 bits (65), Expect = 1e-028
Identities = 131/153 (85%)
Strand = Plus / Minus
Query: 330 ccattgacctccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagt 389
||||| ||||||||||||||||| ||||||| ||||||||||||||| |||||||| |||
Sbjct: 247 ccattcacctccacagtgttgtcgaccaccaaattcatgaactggtcaaacccacggagt 188
Query: 390 gtgccgataacaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttc 449
|| |||| || | | |||||||||| ||| || ||||||||||| ||||||||||||
Sbjct: 187 gttccgaccaccatcctatttgcattcagcttgatttgaagcttcttatccatgtacttc 128
Query: 450 ttgagatccggaggctgccccgagcggctcatg 482
|||||||| || |||||||| || | |||||||
Sbjct: 127 ttgagatctggtggctgcccggatctgctcatg 95
>gb|BU892984.1|BU892984 P071H05 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 430
Score = 129 bits (65), Expect = 1e-028
Identities = 146/173 (84%)
Strand = Plus / Minus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
||||||||||| || ||||| |||||||| || || || ||||| |||| ||||| |||
Sbjct: 173 acaacactgttgcctctgatcaccaccatgcctatgtcagttttctcatcaccattcacc 114
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| ||||||| ||||||||||||||| |||||||| ||||| ||||
Sbjct: 113 tccacagtgttgtcgaccaccaaattcatgaactggtcaaacccacggagtgttccgacc 54
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttctt 451
|| | | |||||||||| ||| || ||||||||||| ||||||||||||||
Sbjct: 53 accatcctatttgcattcagcttgatttgaagcttcttatccatgtacttctt 1
>gb|BU832159.1|BU832159 T030B01 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 588
Score = 127 bits (64), Expect = 5e-028
Identities = 169/204 (82%)
Strand = Plus / Minus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||| | || ||||| ||||| |||| ||||| |||
Sbjct: 265 acaacactattgcctctgatcaccaccgtgcctatatcagttttctcatcaccattcacc 206
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| || || | ||||||||||||||| ||||| |||||||| || |
Sbjct: 205 tccacagtgttgtcaacaactaaattcatgaactggtcaaacccgcgaagtgttccaacc 146
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||||||||| ||||||||||||||
Sbjct: 145 accatcctatttgcattcagcttgatttgaagcttcttgtccatatacttcttgagatct 86
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||| ||||| |||||||||
Sbjct: 85 ggtggctgacccgatcggctcatg 62
>gb|CX172583.1|CX172583 H04_69-45_16.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 481
Score = 127 bits (64), Expect = 5e-028
Identities = 169/204 (82%)
Strand = Plus / Minus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || |||| |||||||| || ||||| ||||| |||| ||||| |||
Sbjct: 264 acaacactattgcctctgagcaccaccatgcctatatcagttttctcatcaccattcacc 205
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
||||| |||||||| || || | ||||||||||||||| |||||||||||||| || |
Sbjct: 204 tccaccgtgttgtcaacaactaaattcatgaactggtcaaacccacgaagtgttccaacc 145
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||||||||| ||||||||||||||
Sbjct: 144 accatcctatttgcattcagcttgatttgaagcttcttgtccatatacttcttgagatct 85
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||| ||||| |||||||||
Sbjct: 84 ggtggctgacccgatcggctcatg 61
>gb|BU892421.1|BU892421 P063D02 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 568
Score = 119 bits (60), Expect = 1e-025
Identities = 168/204 (82%)
Strand = Plus / Minus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||||| || |||| ||||| |||| ||||| | |
Sbjct: 272 acaacactattgcctctgatcaccaccatgcctgtatcagttttctcatcaccattcaac 213
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| || || | ||||||||||||||| ||||| |||||||| || |
Sbjct: 212 tccacagtgttgtcaacaactaaattcatgaactggtcaaacccgcgaagtgttcctacc 153
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || ||||||||||||||||| ||||||||||||||
Sbjct: 152 accatcctatttgcattcagcttgatttgaagcttcttgtccatatacttcttgagatct 93
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||| ||||| |||||||||
Sbjct: 92 ggtggctgacccgatcggctcatg 69
>gb|BU893720.1|BU893720 P081E04 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 601
Score = 119 bits (60), Expect = 1e-025
Identities = 168/204 (82%)
Strand = Plus / Minus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||||| || ||||| ||||| |||| ||||| | |
Sbjct: 268 acaacactattgcctctgatcaccaccatgcctatatcagttttctcatcaccattcaac 209
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| || || | ||||||||||||||| ||||| |||||||| || |
Sbjct: 208 tccacagtgttgtcaacaactaaattcatgaactggtcaaacccgcgaagtgttcctacc 149
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatcc 458
|| | | |||||||||| ||| || |||||||||| |||||| ||||||||||||||
Sbjct: 148 accatcctatttgcattcagcttgatttgaagcttctcgtccatatacttcttgagatct 89
Query: 459 ggaggctgccccgagcggctcatg 482
|| ||||| ||||| |||||||||
Sbjct: 88 ggtggctgacccgatcggctcatg 65
>gb|DN484898.1|DN484898 K034P58.3pR Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA clone K034P58 3', mRNA sequence
Length = 409
Score = 101 bits (51), Expect = 3e-020
Identities = 109/127 (85%), Gaps = 1/127 (0%)
Strand = Plus / Plus
Query: 330 ccattgacctccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagt 389
||||| ||||||||| ||||||||||||||| ||||||||||||||| |||||||| |||
Sbjct: 246 ccattcacctccacaatgttgtccaccaccaaattcatgaactggtcaaacccacggagt 305
Query: 390 gtgccgataacaacacggtttgcattc-atcttaatctgaagcttcttgtccatgtactt 448
|| |||| || | | ||||||||| || || || ||||||||||| |||||||||||
Sbjct: 306 gttccgaccaccatcctatttgcattcaattttgatttgaagcttcttatccatgtactt 365
Query: 449 cttgaga 455
|||||||
Sbjct: 366 cttgaga 372
>gb|CV281298.1|CV281298 WS0181.B21_I21 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0181_I21 3', mRNA sequence
Length = 378
Score = 99.6 bits (50), Expect = 1e-019
Identities = 101/118 (85%)
Strand = Plus / Plus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||||| || || || ||||| |||| ||||| |||
Sbjct: 213 acaacactattgcctctgatcaccaccatgcctatgtcggttttctcatcaccattcacc 272
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccga 396
|||||||||||||| ||||||| ||||||||||||||| |||||||| ||||| ||||
Sbjct: 273 tccacagtgttgtcaaccaccaaattcatgaactggtcaaacccacggagtgttccga 330
>gb|CV276600.1|CV276600 WS0141.B21_E10 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0141_E10 3', mRNA sequence
Length = 363
Score = 97.6 bits (49), Expect = 5e-019
Identities = 136/165 (82%)
Strand = Plus / Plus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||||| || || || ||||| |||| ||||| ||
Sbjct: 196 acaacactattgcctctgatcaccaccatgcctatgtcagttttctcatcaccattcacg 255
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccgata 398
|||||||||||||| ||||||| ||||||||||||||| |||||||| ||||| ||||
Sbjct: 256 tccacagtgttgtcaaccaccaaattcatgaactggtcaaacccacggagtgttccgacc 315
Query: 399 acaacacggtttgcattcatcttaatctgaagcttcttgtccatg 443
|| | | |||||||||| ||| || ||||||||||| ||||||
Sbjct: 316 accatcctatttgcattcagcttgatttgaagcttcttatccatg 360
>gb|DT488265.1|DT488265 WS02535.B21_P07 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02535_P07 3', mRNA sequence
Length = 911
Score = 91.7 bits (46), Expect = 3e-017
Identities = 100/118 (84%)
Strand = Plus / Plus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||||| || || || ||||| |||| ||||| ||
Sbjct: 196 acaacactattgcctctgatcaccaccatgcctatgtcagttttctcatcaccattcacg 255
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgtgccga 396
|||||||||||||| ||||||| ||||||||||||||| |||||||| ||||| ||||
Sbjct: 256 tccacagtgttgtcaaccaccaaattcatgaactggtcaaacccacggagtgttccga 313
>gb|DT526007.1|DT526007 WS02046.C21_O01 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02046_O01 3', mRNA sequence
Length = 313
Score = 81.8 bits (41), Expect = 3e-014
Identities = 95/113 (84%)
Strand = Plus / Plus
Query: 279 acaacactgtttcccctgataaccaccattccaatatctgttttgtcatttccattgacc 338
|||||||| || || ||||| |||||||| || || || | ||| |||| ||||| |||
Sbjct: 197 acaacactattgcctctgatcaccaccatgcctatgtcggctttctcatcaccattcacc 256
Query: 339 tccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagtgt 391
||||| |||||||| ||||||| ||||||||||||||| |||||||| |||||
Sbjct: 257 tccacggtgttgtcaaccaccaaattcatgaactggtcaaacccacggagtgt 309
>gb|BU836212.1|BU836212 T084A01 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 180
Score = 77.8 bits (39), Expect = 4e-013
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 408 tttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatccggaggctgc 467
|||||||||| ||| || ||||||||||| |||||||||||||||||||| || ||||||
Sbjct: 161 tttgcattcagcttgatttgaagcttcttatccatgtacttcttgagatctggtggctgc 102
Query: 468 cccgagcggctcatg 482
|| || | |||||||
Sbjct: 101 ccggatctgctcatg 87
>gb|BU868970.1|BU868970 M124D06 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 180
Score = 73.8 bits (37), Expect = 7e-012
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 408 tttgcattcatcttaatctgaagcttcttgtccatgtacttcttgagatccggaggctgc 467
|||||||||| || || ||||||||||| |||||||||||||||||||| || ||||||
Sbjct: 135 tttgcattcagctagatttgaagcttcttatccatgtacttcttgagatctggtggctgc 76
Query: 468 cccga 472
|||||
Sbjct: 75 cccga 71
>gb|AJ776704.1|AJ776704 AJ776704 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400017D04F1, mRNA sequence
Length = 307
Score = 69.9 bits (35), Expect = 1e-010
Identities = 116/143 (81%)
Strand = Plus / Minus
Query: 330 ccattgacctccacagtgttgtccaccaccagattcatgaactggtcgaacccacgaagt 389
||||| |||||| |||||||||| || ||| ||||||||||||||| ||||| || |||
Sbjct: 204 ccattcacctccccagtgttgtcaacggccaaattcatgaactggtcaaacccccggagt 145
Query: 390 gtgccgataacaacacggtttgcattcatcttaatctgaagcttcttgtccatgtacttc 449
|| ||| | | | |||||||||| ||| || |||||||| || |||||||||||
Sbjct: 144 gttccggcccccatcctatttgcattcagcttgatttgaagctttttatccatgtacttt 85
Query: 450 ttgagatccggaggctgccccga 472
||||||| ||||||||||||||
Sbjct: 84 ttgagatttggaggctgccccga 62
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 60,566
Number of Sequences: 369679
Number of extensions: 60566
Number of successful extensions: 16403
Number of sequences better than 0.5: 59
Number of HSP's better than 0.5 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 16296
Number of HSP's gapped (non-prelim): 106
length of query: 621
length of database: 203,408,664
effective HSP length: 19
effective length of query: 602
effective length of database: 196,384,763
effective search space: 118223627326
effective search space used: 118223627326
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)