BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805363.2.1
(2856 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY162181.1| Populus tremuloides cellulose synthase (CesA... 638 0.0
gb|AJ779545.1|AJ779545 AJ779545 Populus euphratica root 3-6... 432 e-119
gb|AJ779945.1|AJ779945 AJ779945 Populus euphratica root 3-6... 428 e-118
gb|BU823358.1|BU823358 UB51DPD11 Populus tremula cambium cD... 414 e-114
gb|AJ778214.1|AJ778214 AJ778214 Populus euphratica root 3-6... 406 e-111
gb|CK107258.1|CK107258 UB51DPD11.5pR Populus active cambium... 361 1e-097
gb|AY055724.2| Populus tremuloides cellulose synthase (CesA... 228 9e-058
gb|AY196961.1| Populus tremuloides cellulose synthase 6 (Ce... 228 9e-058
gb|CA925680.1|CA925680 MTU7TL.P4.E11 Aspen leaf cDNA Librar... 220 2e-055
gb|CA931952.1|CA931952 MTU4TA.P25.A10 Aspen apex cDNA Libra... 176 3e-042
gb|CA932078.1|CA932078 MTU4TA.P26.F03 Aspen apex cDNA Libra... 167 3e-039
gb|DV466097.1|DV466097 MTUNUL1.P47.C03 NUL Populus fremonti... 159 7e-037
gb|DT500468.1|DT500468 PX0015.BR_I21 PT-X-FL-A-1 Populus tr... 153 4e-035
gb|CV244615.1|CV244615 WS0255.B21_C09 PT-MB-N-A-15 Populus ... 149 7e-034
gb|DT489371.1|DT489371 WS02542.B21_A18 PT-MB-N-A-15 Populus... 149 7e-034
gb|AJ778476.1|AJ778476 AJ778476 Populus euphratica cambium ... 139 7e-031
gb|CA930801.1|CA930801 MTU2TA.P10.D08 Aspen apex cDNA Libra... 133 4e-029
gb|DT493063.1|DT493063 WS02553.C21_E11 PT-MB-N-A-15 Populus... 127 3e-027
gb|CX169886.1|CX169886 G10_69-94_14.ab1 leaf inoculated wit... 125 1e-026
gb|DT500162.1|DT500162 PX0011.BR_G15 PT-X-FL-A-1 Populus tr... 121 2e-025
gb|CB239511.1|CB239511 RSH12F10 two-month-old roots from cl... 119 6e-025
gb|AJ771596.1|AJ771596 AJ771596 Populus euphratica root 3-6... 119 6e-025
gb|CF235713.1|CF235713 PtaJXT0026B7B0703 Poplar cDNA librar... 115 1e-023
gb|DT476519.1|DT476519 WS01229.B21_N17 PT-GT-FL-A-3 Populus... 115 1e-023
gb|AY095297.1| Populus tremuloides cellulose synthase (CesA... 109 6e-022
gb|BP924070.1|BP924070 BP924070 full-length enriched poplar... 105 9e-021
gb|CN524693.1|CN524693 GQ015M08.T3_H02 GQ015 Populus tricho... 103 4e-020
gb|AF081534.1|AF081534 Populus x canescens cellulose syntha... 103 4e-020
gb|AF527387.1| Populus tremuloides xylem-specific cellulose... 103 4e-020
gb|AY573571.1| Populus tremula x Populus tremuloides cellul... 103 4e-020
gb|DT509821.1|DT509821 WS02424.BR_N10 PTxD-ICC-N-A-14 Popul... 101 1e-019
gb|AY573572.1| Populus tremula x Populus tremuloides cellul... 101 1e-019
gb|CV130875.1|CV130875 X9SP07b02 Populus stem seasonal libr... 98 2e-018
gb|CN520281.1|CN520281 GQ0105.B3_A14 GQ010 Populus trichoca... 96 9e-018
gb|CN550567.1|CN550567 GQ0241.B3_I15 GQ024 Populus trichoca... 90 6e-016
gb|AJ774508.1|AJ774508 AJ774508 Populus euphratica shoot 3-... 90 6e-016
gb|DT487943.1|DT487943 WS02535.B21_B11 PT-MB-N-A-15 Populus... 90 6e-016
gb|AY162180.1| Populus tremuloides cellulose synthase (CesA... 90 6e-016
gb|CF232388.1|CF232388 PtaJXO0009H2H0216 Poplar cDNA librar... 88 2e-015
gb|CF235321.1|CF235321 PtaJXT0021D9D0907 Poplar cDNA librar... 88 2e-015
gb|AJ775294.1|AJ775294 AJ775294 Populus euphratica shoot 3-... 88 2e-015
gb|AJ775532.1|AJ775532 AJ775532 Populus euphratica shoot 3-... 88 2e-015
gb|CA927446.1|CA927446 MTU6CR.P9.B04 Aspen root cDNA Librar... 86 9e-015
gb|CK100621.1|CK100621 C057P32.5pR Populus strain T89 leave... 86 9e-015
gb|CN549808.1|CN549808 GQ0241.B3_H11 GQ024 Populus trichoca... 86 9e-015
gb|DT493580.1|DT493580 WS0111.BR_M17 PT-P-FL-A-2 Populus tr... 84 3e-014
gb|CV227790.1|CV227790 WS0168.B21_D13 PT-DX-A-7 Populus tri... 82 1e-013
gb|CV242542.1|CV242542 WS02515.B21_F16 PT-MB-N-A-15 Populus... 82 1e-013
gb|AF417485.1| Populus tremuloides cellulose synthase (CesA... 82 1e-013
gb|CF229283.1|CF229283 PtaXM0023E4E0410 Poplar cDNA library... 80 5e-013
gb|DT473511.1|DT473511 WS01229.BR_N17 PT-GT-FL-A-3 Populus ... 80 5e-013
gb|BI071413.1|BI071413 C057P32U Populus strain T89 leaves P... 78 2e-012
gb|CF233490.1|CF233490 PtaJXO0024C12C1206 Poplar cDNA libra... 78 2e-012
gb|BP927588.1|BP927588 BP927588 full-length enriched poplar... 76 8e-012
gb|BU817734.1|BU817734 UA20CPD09 Populus tremula cambium cD... 74 3e-011
gb|AJ778410.1|AJ778410 AJ778410 Populus euphratica cambium ... 74 3e-011
gb|CK318831.1|CK318831 X9P03h01 Populus stem seasonal libra... 72 1e-010
gb|AJ777820.1|AJ777820 AJ777820 Populus euphratica root 3-6... 72 1e-010
gb|CV252351.1|CV252351 PX0011.B21_G15 PT-X-FL-A-1 Populus t... 72 1e-010
gb|BP923622.1|BP923622 BP923622 full-length enriched poplar... 72 1e-010
gb|CA934196.1|CA934196 MTU3TS.P4.D08 Aspen stem cDNA Librar... 70 5e-010
gb|CV283069.1|CV283069 WS0186.B21_F15 PTxD-IL-N-A-9 Populus... 70 5e-010
gb|DT470299.1|DT470299 WS01920.C21_H07 PT-DX-N-A-10 Populus... 70 5e-010
gb|CA926289.1|CA926289 MTU6CR.P13.C05 Aspen root cDNA Libra... 68 2e-009
gb|CF234438.1|CF234438 Ptajxojxo2F10F1012 Poplar cDNA libra... 68 2e-009
gb|CK097446.1|CK097446 UB51DPD11.3pR Populus active cambium... 68 2e-009
gb|CN519879.1|CN519879 GQ0108.B3_I06 GQ010 Populus trichoca... 68 2e-009
gb|CK320732.1|CK320732 X9SP01b11 Populus stem seasonal libr... 68 2e-009
gb|CV262834.1|CV262834 WS0202.B21_K05 PTxN-IB-N-A-11 Populu... 68 2e-009
gb|CV282433.1|CV282433 WS0184.B21_J19 PTxD-IL-N-A-9 Populus... 68 2e-009
gb|AF072131.1|AF072131 Populus tremuloides secondary xylem ... 68 2e-009
gb|AY573574.1| Populus tremula x Populus tremuloides cellul... 68 2e-009
gb|AY573575.1| Populus tremula x Populus tremuloides cellul... 68 2e-009
gb|DQ004570.1| Populus tomentosa cellulose synthase (cesa1)... 68 2e-009
gb|BI127743.1|BI127743 G065P23Y Populus cambium cDNA librar... 64 3e-008
gb|BI128874.1|BI128874 G082P82Y Populus cambium cDNA librar... 64 3e-008
gb|AY330166.1| Populus tremuloides CesA7A-like mRNA, partia... 64 3e-008
gb|AY573573.2| Populus tremula x Populus tremuloides cellul... 64 3e-008
gb|BU897991.1|BU897991 X073A11 Populus wood cDNA library Po... 62 1e-007
gb|CF227502.1|CF227502 PtaD6G2G0214 Poplar cDNA library fro... 62 1e-007
gb|CF232701.1|CF232701 PtaJXO0014G1G0113 Poplar cDNA librar... 62 1e-007
gb|CF235639.1|CF235639 PtaJXT0025C12C1206 Poplar cDNA libra... 62 1e-007
gb|AJ778868.1|AJ778868 AJ778868 Populus euphratica cambium ... 62 1e-007
gb|DV465848.1|DV465848 MTUNUL1.P43.H11 NUL Populus fremonti... 62 1e-007
gb|DV466748.1|DV466748 MTUNUL1.P9.G02 NUL Populus fremontii... 62 1e-007
gb|CF216199.1|CF216199 PT1009 Hybrid aspen xylem up-regulat... 60 5e-007
gb|CF234212.1|CF234212 PtaJXO3H12H1216 Poplar cDNA library ... 60 5e-007
gb|CK092703.1|CK092703 G092P25.3pR Populus tension wood cDN... 60 5e-007
gb|CK102806.1|CK102806 G092P25.5pR Populus tension wood cDN... 60 5e-007
gb|BP923939.1|BP923939 BP923939 full-length enriched poplar... 60 5e-007
gb|BP928099.1|BP928099 BP928099 full-length enriched poplar... 60 5e-007
gb|AY330165.1| Populus tremuloides CesA5A-like mRNA, partia... 60 5e-007
gb|AI162302.1|AI162302 A015P47U Hybrid aspen plasmid librar... 58 2e-006
gb|CV229552.1|CV229552 WS01913.B21_K14 PT-DX-N-A-10 Populus... 58 2e-006
gb|AY162184.1| Populus tremuloides cellulose synthase-like ... 58 2e-006
gb|BI129778.1|BI129778 G095P49Y Populus cambium cDNA librar... 56 8e-006
gb|BI130668.1|BI130668 G109P08Y Populus cambium cDNA librar... 56 8e-006
gb|CA926496.1|CA926496 MTU6CR.P15.F11 Aspen root cDNA Libra... 56 8e-006
gb|CA926817.1|CA926817 MTU6CR.P1.E04 Aspen root cDNA Librar... 56 8e-006
gb|CF229078.1|CF229078 PtaXM0021A1A0101 Poplar cDNA library... 56 8e-006
gb|CK103234.1|CK103234 G109P08.5pR Populus tension wood cDN... 56 8e-006
gb|CV234604.1|CV234604 WS01215.B21.1_I11 PT-GT-FL-A-3 Popul... 56 8e-006
gb|DT475055.1|DT475055 WS0125.BR_N16 PT-GT-FL-A-3 Populus t... 56 8e-006
gb|DT475135.1|DT475135 WS0126.BR_C03 PT-GT-FL-A-3 Populus t... 56 8e-006
gb|AI163338.1|AI163338 A040P09U Hybrid aspen plasmid librar... 54 3e-005
gb|BI127228.1|BI127228 G057P27Y Populus cambium cDNA librar... 54 3e-005
gb|BI131187.1|BI131187 G116P69Y Populus cambium cDNA librar... 54 3e-005
gb|BU895617.1|BU895617 X028D07 Populus wood cDNA library Po... 54 3e-005
gb|CF216196.1|CF216196 PT1004 Hybrid aspen xylem up-regulat... 54 3e-005
gb|CF232837.1|CF232837 PtaJXO0016D5D0507 Poplar cDNA librar... 54 3e-005
gb|CK107777.1|CK107777 G057P27 Populus tension wood cDNA li... 54 3e-005
gb|CK319325.1|CK319325 X9P09e02 Populus stem seasonal libra... 54 3e-005
gb|CV268371.1|CV268371 WS0205.B21_E18 PTxN-IB-N-A-11 Populu... 54 3e-005
gb|CK092951.1|CK092951 G101P46.3pR Populus tension wood cDN... 52 1e-004
gb|CK317759.1|CK317759 B9P01d09 Populus stem seasonal libra... 52 1e-004
gb|CK087778.1|CK087778 A020P56.3pR Hybrid aspen plasmid lib... 50 5e-004
gb|CV273968.1|CV273968 WS01712.B21_M13 PTxD-NR-A-8 Populus ... 50 5e-004
gb|CF232642.1|CF232642 PtaJXO0013H5H0515 Poplar cDNA librar... 48 0.002
gb|CF233341.1|CF233341 PtaJXO0022B5B0503 Poplar cDNA librar... 48 0.002
gb|CN520055.1|CN520055 GQ0105.B3_H23 GQ010 Populus trichoca... 48 0.002
gb|BI128968.1|BI128968 G084P20Y Populus cambium cDNA librar... 46 0.007
gb|CK091716.1|CK091716 F120P33.3pR Populus flower cDNA libr... 46 0.007
gb|CK101805.1|CK101805 F120P33.5pR Populus flower cDNA libr... 46 0.007
gb|CN523759.1|CN523759 GQ015M04.T3_A09 GQ015 Populus tricho... 46 0.007
gb|CV275712.1|CV275712 WS0177.B21_F22 PTxD-NR-A-8 Populus t... 46 0.007
gb|BI131891.1|BI131891 G127P18Y Populus cambium cDNA librar... 44 0.029
gb|BU866508.1|BU866508 S067E12 Populus imbibed seed cDNA li... 44 0.029
gb|BU870116.1|BU870116 Q008I09 Populus flower cDNA library ... 44 0.029
gb|CF229941.1|CF229941 PtaC0001G4G0414 Poplar cDNA library ... 44 0.029
gb|CF236447.1|CF236447 PtaJXT2H2H0216 Poplar cDNA library f... 44 0.029
gb|CK111062.1|CK111062 Q008E05 Populus dormant bud cDNA lib... 44 0.029
gb|CV234217.1|CV234217 WS01214.B21_B13 PT-GT-FL-A-3 Populus... 44 0.029
gb|CV235270.1|CV235270 WS01218.B21_H07 PT-GT-FL-A-3 Populus... 44 0.029
gb|CV238245.1|CV238245 WS0125.B21_N16 PT-GT-FL-A-3 Populus ... 44 0.029
gb|CV238311.1|CV238311 WS0126.B21_C03 PT-GT-FL-A-3 Populus ... 44 0.029
gb|DT507297.1|DT507297 WS02417.BR_O04 PTxD-ICC-N-A-14 Popul... 44 0.029
gb|DT523570.1|DT523570 WS02040.B21_A19 PTxN-IB-N-A-11 Popul... 44 0.029
gb|CF228296.1|CF228296 PtaXM0011D10D1008 Poplar cDNA librar... 42 0.12
gb|CV273266.1|CV273266 WS01710.B21_E12 PTxD-NR-A-8 Populus ... 42 0.12
gb|CV275252.1|CV275252 WS0175.B21_N18 PTxD-NR-A-8 Populus t... 42 0.12
gb|BP931353.1|BP931353 BP931353 full-length enriched poplar... 42 0.12
gb|BP935110.1|BP935110 BP935110 full-length enriched poplar... 42 0.12
gb|DN487448.1|DN487448 Q027C07.3pR Populus dormant bud cDNA... 42 0.12
gb|AY162183.1| Populus tremuloides cellulose synthase-like ... 42 0.12
gb|AI164546.1|AI164546 A064p24u Hybrid aspen plasmid librar... 40 0.46
gb|BI128229.1|BI128229 G072P90Y Populus cambium cDNA librar... 40 0.46
gb|BI128887.1|BI128887 G083P04Y Populus cambium cDNA librar... 40 0.46
gb|BU815407.1|BU815407 N041C05 Populus bark cDNA library Po... 40 0.46
gb|BU894855.1|BU894855 X016A07 Populus wood cDNA library Po... 40 0.46
gb|BU894931.1|BU894931 X017A07 Populus wood cDNA library Po... 40 0.46
gb|CF228576.1|CF228576 PtaXM0014G2G0214 Poplar cDNA library... 40 0.46
gb|CF232524.1|CF232524 PtaJXO0011E3E0309 Poplar cDNA librar... 40 0.46
gb|CF232848.1|CF232848 PtaJXO0016E6E0610 Poplar cDNA librar... 40 0.46
gb|CF235304.1|CF235304 PtaJXT0021C1C0105 Poplar cDNA librar... 40 0.46
gb|CF235953.1|CF235953 PtaJXT0028H7H0715 Poplar cDNA librar... 40 0.46
gb|CK088642.1|CK088642 A064P24.3pR Hybrid aspen plasmid lib... 40 0.46
gb|CK092990.1|CK092990 G103P13.3pR Populus tension wood cDN... 40 0.46
gb|CK093129.1|CK093129 G109P08.3pR Populus tension wood cDN... 40 0.46
gb|CK102126.1|CK102126 G065P23.5pR Populus tension wood cDN... 40 0.46
gb|CK102947.1|CK102947 G097P01.5pR Populus tension wood cDN... 40 0.46
gb|CN549469.1|CN549469 GQ0241.B3_B20 GQ024 Populus trichoca... 40 0.46
gb|CV226017.1|CV226017 WS0163.B21_A20 PT-DX-A-7 Populus tri... 40 0.46
gb|CV268970.1|CV268970 WS0206.B21_P09 PTxN-IB-N-A-11 Populu... 40 0.46
gb|CV272431.1|CV272431 WS0157.B21_K08 PTxN-IB-A-6 Populus t... 40 0.46
gb|DN493622.1|DN493622 G071P10.5pR Populus tension wood cDN... 40 0.46
gb|DN495393.1|DN495393 N041C05.5pR Populus bark cDNA librar... 40 0.46
gb|AI161715.1|AI161715 A005P67U Hybrid aspen plasmid librar... 38 1.8
gb|AI162413.1|AI162413 A017P22U Hybrid aspen plasmid librar... 38 1.8
gb|AI166149.1|AI166149 B00927U Hybrid aspen plasmid library... 38 1.8
gb|BI131900.1|BI131900 G127P28Y Populus cambium cDNA librar... 38 1.8
gb|BI132304.1|BI132304 G135P11Y Populus cambium cDNA librar... 38 1.8
gb|BU894361.1|BU894361 X008A10 Populus wood cDNA library Po... 38 1.8
gb|BU896705.1|BU896705 X044E08 Populus wood cDNA library Po... 38 1.8
gb|CF216242.1|CF216242 PT1060 Hybrid aspen xylem up-regulat... 38 1.8
gb|CF216282.1|CF216282 PT1104 Hybrid aspen xylem up-regulat... 38 1.8
gb|CF216327.1|CF216327 PT1158 Hybrid aspen xylem up-regulat... 38 1.8
gb|CF228734.1|CF228734 PtaXM0016G4G0414 Poplar cDNA library... 38 1.8
gb|CF229187.1|CF229187 PtaXM0022D10D1008 Poplar cDNA librar... 38 1.8
gb|CF229740.1|CF229740 PtaXM0029A6A0602 Poplar cDNA library... 38 1.8
gb|CF235000.1|CF235000 PtaJXT0017F7F0711 Poplar cDNA librar... 38 1.8
gb|CF236377.1|CF236377 PtaJXT2B10B1004 Poplar cDNA library ... 38 1.8
gb|CK094303.1|CK094303 I023P39.3pR Populus senescing leaves... 38 1.8
gb|CK098592.1|CK098592 A020P56.5pR Hybrid aspen plasmid lib... 38 1.8
gb|CK104266.1|CK104266 I023P39.5pR Populus senescing leaves... 38 1.8
gb|CK116304.1|CK116304 B009P27 Hybrid aspen plasmid library... 38 1.8
gb|CN524680.1|CN524680 GQ015M13.T3_D10 GQ015 Populus tricho... 38 1.8
gb|CK319336.1|CK319336 X9P09f03 Populus stem seasonal libra... 38 1.8
gb|CX180372.1|CX180372 G06_45-102_14.ab1 leaf inoculated wi... 38 1.8
gb|CX180715.1|CX180715 G05_45-68_13.ab1 leaf inoculated wit... 38 1.8
gb|BI128528.1|BI128528 G077P53Y Populus cambium cDNA librar... 36 7.2
gb|BI132326.1|BI132326 G135P19Y Populus cambium cDNA librar... 36 7.2
gb|CA926925.1|CA926925 MTU6CR.P2.H01 Aspen root cDNA Librar... 36 7.2
gb|CF229383.1|CF229383 PtaXM0024G4G0414 Poplar cDNA library... 36 7.2
gb|CF234499.1|CF234499 Ptajxojxo3E2E0210 Poplar cDNA librar... 36 7.2
gb|CF237106.1|CF237106 Ptajxtjxt2B1B0103 Poplar cDNA librar... 36 7.2
gb|CK116718.1|CK116718 B016P26 Hybrid aspen plasmid library... 36 7.2
gb|CK117433.1|CK117433 B050P94 Hybrid aspen plasmid library... 36 7.2
gb|CN518195.1|CN518195 GQ0092.B3_P04 GQ009 Populus trichoca... 36 7.2
gb|CN524029.1|CN524029 GQ015M07.T3_H06 GQ015 Populus tricho... 36 7.2
gb|CV225435.1|CV225435 WS0161.B21_G07 PT-DX-A-7 Populus tri... 36 7.2
gb|CV225888.1|CV225888 WS0162.B21_K19 PT-DX-A-7 Populus tri... 36 7.2
gb|CV226195.1|CV226195 WS0163.B21_J02 PT-DX-A-7 Populus tri... 36 7.2
gb|CV227633.1|CV227633 WS0167.B21_M03 PT-DX-A-7 Populus tri... 36 7.2
gb|CV258347.1|CV258347 WS0249.B21_E12 PTxD-ICC-N-A-14 Popul... 36 7.2
gb|CV272957.1|CV272957 WS0171.B21_D20 PTxD-NR-A-8 Populus t... 36 7.2
gb|DT494684.1|DT494684 WS01119.BR_C11 PT-P-FL-A-2 Populus t... 36 7.2
gb|DT506617.1|DT506617 WS02416.BR_A21 PTxD-ICC-N-A-14 Popul... 36 7.2
gb|DT511285.1|DT511285 WS02416.B21_A21 PTxD-ICC-N-A-14 Popu... 36 7.2
gb|DV465864.1|DV465864 MTUNUL1.P44.B06 NUL Populus fremonti... 36 7.2
>gb|AY162181.1| Populus tremuloides cellulose synthase (CesA4) mRNA, complete cds
Length = 3640
Score = 638 bits (322), Expect = 0.0
Identities = 919/1116 (82%), Gaps = 2/1116 (0%)
Strand = Plus / Minus
Query: 1658 ataatgttaggctccaaatcagcttctgtcaatacaggatcatagccatacaaggcctgc 1717
|||||||| || |||||||| | |||||||| || |||||||| ||||||| ||| |||
Sbjct: 2015 ataatgtttggttccaaatcttcctctgtcaaaactggatcataaccatacagggcttgc 1956
Query: 1718 ctattgaaacagcatcctgttcccacataaacaggtccttgaatgccatctagacccttc 1777
| ||||||||||| || ||||| ||||| ||||| || || ||||| || |||||||||
Sbjct: 1955 cggttgaaacagcaaccagttccaacatacacaggcccctggatgccgtccagacccttc 1896
Query: 1778 atattaatatcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctatacca 1837
| || ||||||||||| ||||| || || || ||||||||||| |||||||| || |||
Sbjct: 1895 aagttgatatcaaagaaaacaatattgcgattggcatatcgatcgtgcaagtcaatgcca 1836
Query: 1838 tcaaatctttgtggaaactgaacatagcaagttttccttcc-tagtgctggatccatcat 1896
||||| | |||||| ||||| | |||||| || ||| |||| ||| || || ||||||||
Sbjct: 1835 tcaaaacgttgtgggaactgtatatagcatgtcttctttccatag-gcagggtccatcat 1777
Query: 1897 gaaacacatagcctctctaagagctttgctgctattgaagtagtgatcacaatccacatt 1956
||||||||| || ||| |||||||||||||| |||||||||||||||||||||| || ||
Sbjct: 1776 gaaacacatggcttctttaagagctttgctgttattgaagtagtgatcacaatcgacgtt 1717
Query: 1957 aagaagataagcaccattcgtcaggacagctgatacgcgaatcaaagcattcatggcacc 2016
|||||||| |||||||| ||||| |||||||| || ||||||| |||||||| || ||
Sbjct: 1716 cagaagataggcaccattggtcagtacagctgaaactcgaatcagtgcattcattgctcc 1657
Query: 2017 agccttcttgtggtgctggaagcctggcctcttttcacgagaaacataaacaagccgtgg 2076
|| |||||||| |||||||| || || |||||||||||||||||||| ||||| || ||
Sbjct: 1656 ggctttcttgtgatgctggaatccaggtctcttttcacgagaaacatatacaagacgagg 1597
Query: 2077 caactcattcccatccgtgtcaagcccaccactgtggcccaagaatacttggatcattcc 2136
| |||||| |||||||| || ||||| |||||||| || ||||| || || ||||||||
Sbjct: 1596 tagctcatttccatccgtatcgagccccccactgtgacctaagaacacctgaatcattcc 1537
Query: 2137 nggatgatctctagggttattcccaggccanggagtgccatcagccatggtccagccctc 2196
|| ||||| || || ||||| |||||||| ||||| ||||| ||| ||||| || ||
Sbjct: 1536 tgggtgatccctgggattatttccaggccatggagttccatcctgcattgtccaaccttc 1477
Query: 2197 ctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaactcttcata 2256
|| || || ||||| ||||| |||||||| |||| |||||| || ||||| ||||||||
Sbjct: 1476 ttctggcatcttttgagctttggcaacaagagcattgatccgcaccttgaattcttcata 1417
Query: 2257 ctccctcttcatagcccgcctttctttcacaaaagaaggttgtattttgtcctttaggta 2316
|| || ||||| || || | ||||||||||||||||| ||||| ||||||| ||| ||
Sbjct: 1416 ttctcttttcattgctcggcgctctttcacaaaagaaggctgtatcttgtcctctagata 1357
Query: 2317 atctatctttcgagcaaagtaaaactctggagccctaggttcaatgttgtgtttcttgca 2376
||| |||||| | ||||| |||||||| || |||||||| ||||| ||||| ||||||||
Sbjct: 1356 atccatcttttgggcaaaataaaactcaggggccctaggctcaatattgtgcttcttgca 1297
Query: 2377 aaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacat 2436
| | | || |||||||| ||||| || |||||||| || |||||||| ||||||||
Sbjct: 1296 agaaaggcgcctcttccttgcgaactccgcagtttcagaaagggcttcaaatgtcaacat 1237
Query: 2437 agctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaag 2496
||||||||| ||||| |||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 1236 agctgaaccatcatctgaaacatagcatgatactttgtcgacagggtaatcaacagcaag 1177
Query: 2497 aatggacaggacagtgttgccagtaattagaggaggttccttaagtggatccactgtact 2556
|||||||| |||||||| | || | | ||||||||| || | ||||||||||||||
Sbjct: 1176 aatggacaacacagtgtttgctgttacaataggaggttctttcatgggatccactgtact 1117
Query: 2557 aacaaagacatcgattggagccaactgggatggctcaccctccctatcatatctcaatgc 2616
|||||||| || || ||||| ||||| ||||| || || || | ||||||||| |||||
Sbjct: 1116 aacaaagatgtcaataggagctaactgtgatggttctccatcacgatcatatcttaatgc 1057
Query: 2617 aagtctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaag 2676
|| || ||||||||||| || || |||||||| ||| ||||| |||||||| |||||
Sbjct: 1056 tagcctgtcgaggtaagtctcgcgattgataggcatccattttggaaactgatccagaag 997
Query: 2677 ccaagacaaagcaaaccaaacttcacaaataacagatacaagccacaacccataagcatc 2736
||| ||||| |||||||||| ||||| ||||||||| | |||||| || || |||||
Sbjct: 996 ccaggacaaggcaaaccaaatctcacagataacagatgtcaaccacaaaccgtatgcatc 937
Query: 2737 ttccactggatgagttatacgatattgaaagaagaa 2772
|| |||||||||||||| ||||||||| ||||||||
Sbjct: 936 tttcactggatgagttacacgatattgtaagaagaa 901
Score = 168 bits (85), Expect = 7e-040
Identities = 273/338 (80%)
Strand = Plus / Minus
Query: 562 acccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttg 621
||||| || |||||||| ||||| || || || ||||||||||| ||||| ||||||||
Sbjct: 3101 acccaaatagcaaagaagagcttgccaaagagaggaccccatgactggtatccactgttt 3042
Query: 622 atagcatacgacactccagccactataccaaccaggttaatcacaagcacagtggtnnnn 681
|| ||||| ||||| |||||||| ||||| |||| ||| | |||| || |||||
Sbjct: 3041 atggcataggacacaccagccacaatacccaccatgtttagtacaatgactgtggttgga 2982
Query: 682 nnnatcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcg 741
|| ||||||| |||||| ||||||||||| ||||| |||||||| ||||| |||||
Sbjct: 2981 gggatgagaagagatgtccatttgaacacataaagctctgcaaaatccccatcttcatca 2922
Query: 742 gttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagacct 801
| ||||||||| ||||| |||||||| || || || ||||| ||||| || || || |||
Sbjct: 2921 gatgcctttgaagtgacagtgaagttggtatcaatacctgcaagcaccttcaaaagtcct 2862
Query: 802 tggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctc 861
|| || || ||||||||||| || || || |||||||||||||| || || ||||| |||
Sbjct: 2861 tgaaagacggcaaagagatgagctgatgtaccaccaatgacccagaattgttcattcctc 2802
Query: 862 caccaatcctcaatgccaacaccactccatcgaagctc 899
||||| || ||||| ||||| |||||||||| ||||||
Sbjct: 2801 caccagtcttcaataccaactccactccatctaagctc 2764
Score = 123 bits (62), Expect = 4e-026
Identities = 215/266 (80%)
Strand = Plus / Minus
Query: 1066 tatgccagtctctccagaagctttagccttccattgtaaccataccagataggacagtgt 1125
||||| || ||||||| |||||||| ||||||||||| |||||||| || || || ||
Sbjct: 2597 tatgctagcctctccaaaagctttaatcttccattgtatccataccatatggggcaatgc 2538
Query: 1126 ctgctaagtagaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatca 1185
||||| |||| ||| |||| || || | ||||| || | || ||||| | |||||||
Sbjct: 2537 ctgctcagtaaaatctcaatagatcccaaggcccatcgaagaacctggttcaaacgatca 2478
Query: 1186 gaaagattaattggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggat 1245
||||||||||| |||||||| ||||| || || ||| | |||||||| ||||| |||
Sbjct: 2477 gaaagattaataggagcagaccccttaaatgctgggcgaggaggcatgcaatagattgat 2418
Query: 1246 atccaacctcttgcatgcatcttgaaaccagttaaaatatcttcagtaacagagccatat 1305
|||||||| | ||||||||||| || ||||| ||||||||||| |||||||| |||||
Sbjct: 2417 atccaaccacgagcatgcatcttaaacccagtcaaaatatcttctgtaacagacccatag 2358
Query: 1306 atccatccgatctctttcccccattc 1331
|||||||| |||||||| |||||||
Sbjct: 2357 atccatccaatctctttggcccattc 2332
>gb|AJ779545.1|AJ779545 AJ779545 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000800003H02F1, mRNA sequence
Length = 713
Score = 432 bits (218), Expect = e-119
Identities = 589/712 (82%), Gaps = 1/712 (0%)
Strand = Plus / Minus
Query: 1760 atgccatctagacccttcatattaatatcaaagaagacaatgttccggtttgcatatcga 1819
||||| || |||||||||| || ||||||||||| ||||| || || || |||||||||
Sbjct: 712 atgccgtccagacccttcaagttgatatcaaagaaaacaatattgcgattggcatatcga 653
Query: 1820 tcatgcaagtctataccatcaaat-ctttgtggaaactgaacatagcaagttttccttcc 1878
|| |||||||| ||||||||||| | |||||| ||||| |||||||| || ||| ||||
Sbjct: 652 tcgtgcaagtcaataccatcaaaaacgttgtgggaactgtacatagcatgtcttctttcc 593
Query: 1879 tagtgctggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagta 1938
||| || ||||||||||||||||| || ||| | |||||||||||| ||||||||||
Sbjct: 592 atatgcagggtccatcatgaaacacatggcttcttttagagctttgctgttattgaagta 533
Query: 1939 gtgatcacaatccacattaagaagataagcaccattcgtcaggacagctgatacgcgaat 1998
|||||||||||| || || |||||||| |||||||| ||||| |||||||| || |||||
Sbjct: 532 gtgatcacaatcgacgttcagaagataggcaccattggtcagtacagctgaaactcgaat 473
Query: 1999 caaagcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgaga 2058
|| |||||||| || || || |||||||| |||||||| || || ||||||||||||||
Sbjct: 472 cagtgcattcattgctccggctttcttgtgatgctggaatccaggtctcttttcacgaga 413
Query: 2059 aacataaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaa 2118
|||||| ||||| || || | |||||| ||||| || || ||||| |||||||| || ||
Sbjct: 412 aacatatacaagacgaggtagctcatttccatctgtatcgagccccccactgtgacctaa 353
Query: 2119 gaatacttggatcattccnggatgatctctagggttattcccaggccanggagtgccatc 2178
||| || ||||||||||| || ||||| || || ||||| |||||||| ||||| || ||
Sbjct: 352 gaacacctggatcattcctgggtgatccctgggattatttccaggccacggagttccgtc 293
Query: 2179 agccatggtccagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccg 2238
||| ||||| || || || || || || || ||||| |||||||| |||| ||||||
Sbjct: 292 ctgcattgtccaaccttcttctggcatcttctgagctttggcaacaagagcattgatccg 233
Query: 2239 tactttgaactcttcatactccctcttcatagcccgcctttctttcacaaaagaaggttg 2298
|| ||||| |||||||| || |||||||| || || | ||||||||||||||||| ||
Sbjct: 232 caccttgaattcttcatattctctcttcattgctcggcgctctttcacaaaagaaggctg 173
Query: 2299 tattttgtcctttaggtaatctatctttcgagcaaagtaaaactctggagccctaggttc 2358
||| |||||||| || ||||| |||||| | | ||| |||||||| || ||||| || ||
Sbjct: 172 tatcttgtccttcagataatcaatcttttgggaaaaataaaactcgggggccctgggctc 113
Query: 2359 aatgttgtgtttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatag 2418
||| ||||| |||||||| || || ||||| ||||||||||||||||| |||||||| ||
Sbjct: 112 aatattgtgcttcttgcagaaaggcacccacttccttgcaaactctgcagtttcagaaag 53
Query: 2419 agcttcaaaagtcaacatagctgaaccgtcatcagaaacataacatgatact 2470
|| ||||| ||||||||||||||||| ||||| |||||||| |||||||||
Sbjct: 52 ggcctcaaatgtcaacatagctgaaccatcatctgaaacatagcatgatact 1
>gb|AJ779945.1|AJ779945 AJ779945 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000800009G06F1, mRNA sequence
Length = 735
Score = 428 bits (216), Expect = e-118
Identities = 572/690 (82%), Gaps = 1/690 (0%)
Strand = Plus / Minus
Query: 1787 tcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctt 1846
|||||||| ||||| || || || ||||||||||| |||||||| || |||||||| | |
Sbjct: 708 tcaaagaaaacaatattgcgattggcatatcgatcgtgcaagtcaatgccatcaaaacgt 649
Query: 1847 tgtggaaactgaacatagcaagttttccttcctagtgctggatccatcatgaaac-acat 1905
||||| ||||| ||||||| || ||| |||| ||| || ||||||||||||| ||||
Sbjct: 648 tgtgggaactgtacatagcctgtcttctttccatatgcagggtccatcatgaaacnacat 589
Query: 1906 agcctctctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagata 1965
|| ||| | |||||||||||| |||||||||||||||||||||| || || ||||||||
Sbjct: 588 ggcttcttttagagctttgctgttattgaagtagtgatcacaatcgacgttcagaagata 529
Query: 1966 agcaccattcgtcaggacagctgatacgcgaatcaaagcattcatggcaccagccttctt 2025
|||||||| ||||| |||||||| || ||||||| |||||||| || || || |||||
Sbjct: 528 ggcaccattggtcagtacagctgaaactcgaatcagtgcattcattgctccggctttctt 469
Query: 2026 gtggtgctggaagcctggcctcttttcacgagaaacataaacaagccgtggcaactcatt 2085
||| |||||||| || || |||||||||||||||||||| ||||| || || | ||||||
Sbjct: 468 gtgatgctggaatccaggtctcttttcacgagaaacatatacaagacgaggtagctcatt 409
Query: 2086 cccatccgtgtcaagcccaccactgtggcccaagaatacttggatcattccnggatgatc 2145
||||| || || ||||| |||||||| || ||||| || ||||||||||| || |||||
Sbjct: 408 tccatctgtatcgagccccccactgtgacctaagaacacctggatcattcctgggtgatc 349
Query: 2146 tctagggttattcccaggccanggagtgccatcagccatggtccagccctcctcaggtat 2205
|| || ||||| |||||||| ||||| ||||| ||| ||||| || || || || ||
Sbjct: 348 cctgggattatttccaggccacggagttccatcctgcattgtccaaccttcttctggcat 289
Query: 2206 tttttgcgcttttgcaacaagggcatcgatccgtactttgaactcttcatactccctctt 2265
|| || ||||| |||||||| |||| |||||| || ||||| |||||||| || |||||
Sbjct: 288 cttctgagctttggcaacaagagcattgatccgcaccttgaattcttcatattctctctt 229
Query: 2266 catagcccgcctttctttcacaaaagaaggttgtattttgtcctttaggtaatctatctt 2325
||| || || | ||||||||||||||||| ||||| |||||||| || ||||| |||||
Sbjct: 228 cattgctcggcgctctttcacaaaagaaggctgtatcttgtccttcagataatcaatctt 169
Query: 2326 tcgagcaaagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaac 2385
| | | ||| |||||||| || ||||| || ||||| ||||| |||||||| || || ||
Sbjct: 168 ttgggaaaaataaaactcgggggccctgggctcaatattgtgcttcttgcagaaaggcac 109
Query: 2386 ccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaacc 2445
||| ||||||||||||||||| |||||||| || |||||||| |||||||||||||||||
Sbjct: 108 ccacttccttgcaaactctgcagtttcagaaagggcttcaaatgtcaacatagctgaacc 49
Query: 2446 gtcatcagaaacataacatgatactttgtc 2475
||||| |||||||| ||||||||||||||
Sbjct: 48 atcatctgaaacatagcatgatactttgtc 19
>gb|BU823358.1|BU823358 UB51DPD11 Populus tremula cambium cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 609
Score = 414 bits (209), Expect = e-114
Identities = 492/587 (83%)
Strand = Plus / Minus
Query: 1889 tccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatcacaa 1948
|||||||||| |||||| || ||| |||||||||||||| ||||||||||||||||||||
Sbjct: 597 tccatcatgacacacatggcttctttaagagctttgctgttattgaagtagtgatcacaa 538
Query: 1949 tccacattaagaagataagcaccattcgtcaggacagctgatacgcgaatcaaagcattc 2008
|| || || |||||||| |||||||| ||||| |||||||| || ||||||| ||||||
Sbjct: 537 tcgacgttcagaagataggcaccattggtcagtacagctgaaactcgaatcagtgcattc 478
Query: 2009 atggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacataaaca 2068
|| || || || |||||||| |||||||| || ||||||||||||||||| ||||| |||
Sbjct: 477 attgctccggctttcttgtgatgctggaatccaggcctcttttcacgagatacatataca 418
Query: 2069 agccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaatacttgg 2128
|| || || | |||||| |||||||| || ||||| || ||||| || ||||| || |||
Sbjct: 417 agacgaggtagctcatttccatccgtatcgagccccccgctgtgacctaagaacacctgg 358
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatggtc 2188
|||||||| || ||||| || || ||||| |||||||| ||||| ||||| ||| |||
Sbjct: 357 atcattcctgggtgatccctgggattatttccaggccatggagttccatcctgcattgtc 298
Query: 2189 cagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaac 2248
|| || || || || || || || ||||| |||||||| |||| |||||| || |||||
Sbjct: 297 caaccttcttctggcatcttctgagctttggcaacaagagcattgatccgcaccttgaat 238
Query: 2249 tcttcatactccctcttcatagcccgcctttctttcacaaaagaaggttgtattttgtcc 2308
|||||||| || |||||||| || || | ||||||||||||||||| ||||| ||||||
Sbjct: 237 tcttcatattctctcttcattgctcggcgctctttcacaaaagaaggctgtatcttgtcc 178
Query: 2309 tttaggtaatctatctttcgagcaaagtaaaactctggagccctaggttcaatgttgtgt 2368
|| || ||||| |||||| | ||||| |||||||| || |||||||| ||||| |||||
Sbjct: 177 ttcagataatcaatcttttgggcaaaataaaactcaggggccctaggctcaatattgtgc 118
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
|||||||| || || ||||| |||||||||||||| || |||||||| || ||||||||
Sbjct: 117 ttcttgcagaaaggcacccacttccttgcaaactccgcagtttcagaaagggcttcaaac 58
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtc 2475
||||||||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 57 gtcaacatagctgaaccatcatctgaaacatagcatgatactttgtc 11
>gb|AJ778214.1|AJ778214 AJ778214 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400040H10F1, mRNA sequence
Length = 612
Score = 406 bits (205), Expect = e-111
Identities = 492/587 (83%), Gaps = 1/587 (0%)
Strand = Plus / Minus
Query: 1889 tccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatcacaa 1948
||||||||||||||||| || ||| | |||||||| ||| ||||||||||||||||||||
Sbjct: 602 tccatcatgaaacacatggcttct-tgagagctttactgttattgaagtagtgatcacaa 544
Query: 1949 tccacattaagaagataagcaccattcgtcaggacagctgatacgcgaatcaaagcattc 2008
|| ||||| ||||||||||||||||| ||||| |||||||| || |||||||| ||||||
Sbjct: 543 tcgacattcagaagataagcaccattggtcagtacagctgaaactcgaatcaacgcattc 484
Query: 2009 atggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacataaaca 2068
|| || || || |||||||| |||||||| || || ||||||||||| |||||||| |||
Sbjct: 483 attgctccggctttcttgtgatgctggaatccaggtctcttttcacgggaaacatataca 424
Query: 2069 agccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaatacttgg 2128
|| || || | |||||| ||||||||||||||||| |||||||| ||||| || || |||
Sbjct: 423 agtcgaggtagctcatttccatccgtgtcaagccccccactgtgacccaaaaacacctgg 364
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatggtc 2188
|||||||| || ||||| || || ||||| |||||||| ||||| ||||| ||| |||
Sbjct: 363 atcattcctgggtgatcccttggattatttccaggccatggagttccatcctgcatcgtc 304
Query: 2189 cagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaac 2248
|| || || ||||| || || || ||||| |||||||| |||| ||| || || |||||
Sbjct: 303 caaccttcttcaggcatcttctgagctttggcaacaagagcattgattcgcaccttgaat 244
Query: 2249 tcttcatactccctcttcatagcccgcctttctttcacaaaagaaggttgtattttgtcc 2308
|||||||| || |||||||| || || | ||||| ||||||||||| ||||| ||||||
Sbjct: 243 tcttcatattctctcttcattgctcggcgctctttgacaaaagaaggctgtatcttgtcc 184
Query: 2309 tttaggtaatctatctttcgagcaaagtaaaactctggagccctaggttcaatgttgtgt 2368
|| || ||||| |||||| | ||||| |||||||| || |||||||| ||||| ||||
Sbjct: 183 ttcagataatcaatcttttgggcaaaataaaactcaggggccctaggctcaatactgtgc 124
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
|||||||| || || ||||| |||||||||||||| || |||||||| || ||||||||
Sbjct: 123 ttcttgcagaaaggcacccacttccttgcaaactccgcagtttcagaaagggcttcaaat 64
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtc 2475
|||||||| |||||||| ||||| || ||||| ||||||||||||||
Sbjct: 63 gtcaacattgctgaaccatcatctgagacatagcatgatactttgtc 17
>gb|CK107258.1|CK107258 UB51DPD11.5pR Populus active cambium cDNA library Populus tremula
cDNA clone UB51DPD11 5', mRNA sequence
Length = 596
Score = 361 bits (182), Expect = 1e-097
Identities = 497/596 (83%), Gaps = 5/596 (0%)
Strand = Plus / Minus
Query: 1892 atcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatcacaatcc 1951
|||||||||||||| || ||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 596 atcatgaaacacatggcttctttaagagctttgctgttattgaagtagtgatcacaatcg 537
Query: 1952 acattaagaagataagcaccattcgtcaggacagc-tgatacgcgaatcaaagcattcat 2010
|| || |||||||| |||||||| ||||| ||||| ||| || ||||||| ||||||||
Sbjct: 536 acgttcagaagataggcaccattggtcagtacagcgtgaaactcgaatcagtgcattcat 477
Query: 2011 ggcaccagccttcttgtgg-tgctggaagcctggcctcttttcacgaga-aacataaaca 2068
|| || || ||||| || |||||||| || ||||||||||||||||| |||||| |||
Sbjct: 476 tgctccggctttcttttgaatgctggaatccaggcctcttttcacgagataacatataca 417
Query: 2069 agccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaatacttgg 2128
|| || || | |||||| |||||||| || ||||| || ||||| || ||||| || |||
Sbjct: 416 agacgaggtagctcatttccatccgtatcgagccccccgctgtgacctaagaacacctgg 357
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatcagc-catggt 2187
|||||||| || ||||| || || ||||| |||||||| ||||| ||||| | ||| ||
Sbjct: 356 atcattcctgggtgatccctgggattatttccaggccatggagttccatccgtgcattgt 297
Query: 2188 ccagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaa 2247
||| || || || || || || || ||||| |||||||| |||| |||||| || |||||
Sbjct: 296 ccaaccttcttctggcatcttctgagctttggcaacaagagcattgatccgcaccttgaa 237
Query: 2248 ctcttcatactccctcttcatagcccgcctttctttcacaaaagaaggttgtattttgtc 2307
|||||||| || |||||||| || || | ||||||||||||||||| ||||| |||||
Sbjct: 236 ttcttcatattctctcttcattgctcggcgctctttcacaaaagaaggctgtatcttgtc 177
Query: 2308 ctttaggtaatctatctttcgagcaaagtaaaactctggagccctaggttcaatgttgtg 2367
||| || ||||| |||||| | ||||| |||||||| || |||||||| ||||| |||||
Sbjct: 176 cttcagataatcaatcttttgggcaaaataaaactcaggggccctaggctcaatattgtg 117
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
|||||||| || || ||||| |||||||||||||| || |||||||| || ||||||||
Sbjct: 116 cttcttgcagaaaggcacccacttccttgcaaactccgcagtttcagaaagggcttcaaa 57
Query: 2428 agtcaacatagctgaaccgtcatc-agaaacataacatgatactttgtcaacaggg 2482
||||||||||||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 56 cgtcaacatagctgaaccatcatcttgaaacatagcatgatactttgtcgacaggg 1
>gb|AY055724.2| Populus tremuloides cellulose synthase (CesA5) mRNA, complete cds
Length = 3532
Score = 228 bits (115), Expect = 9e-058
Identities = 475/593 (80%), Gaps = 2/593 (0%)
Strand = Plus / Minus
Query: 1886 ggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatca 1945
|||||| |||||||||||||||| ||||| | ||| ||||| | || | ||||||||||
Sbjct: 1968 ggatccttcatgaaacacatagcttctctcaaagccttgctaatgtttatgtagtgatca 1909
Query: 1946 caatccacatt-aagaagataagcaccattcgtcaggacagctgatacgcgaatcaaagc 2004
||||| | ||| || |||| | || ||||| || || || |||||||| |||| | |
Sbjct: 1908 caatcaagattcaacaagaaaggc-ccattagttagcacggctgatacacgaacaagtga 1850
Query: 2005 attcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacata 2064
||||||||||||||| |||||||||||||||||||| || | ||||||||||||||||||
Sbjct: 1849 attcatggcaccagctttcttgtggtgctggaagccaggacgcttttcacgagaaacata 1790
Query: 2065 aacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaatac 2124
||| | ||| || | |||||| ||||| | |||||||| ||||| ||||||||||| ||
Sbjct: 1789 aactaaccgcggaagctcattaccatcagaatcaagccctccactttggcccaagaaaac 1730
Query: 2125 ttggatcattccnggatgatctctagggttattcccaggccanggagtgccatcagccat 2184
|| |||||||| ||||| ||||| | |||||| |||||||| || || ||||| |||
Sbjct: 1729 ctgaatcattcctggatggtctctggtgttatttccaggccatggggtcccatcttgcat 1670
Query: 2185 ggtccagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtacttt 2244
|||| || || ||||| | |||||||| || |||||||| ||| ||| || | |||
Sbjct: 1669 aatccatccttcttcaggcaccttttgcgccttggcaacaagcccattgatacgaatttt 1610
Query: 2245 gaactcttcatactccctcttcatagcccgcctttctttcacaaaagaaggttgtatttt 2304
|| |||||||| || ||||||||||| | | ||||| |||||||| || || | |||
Sbjct: 1609 aaattcttcatattctctcttcatagctctacggtctttgacaaaagatggctgcacttt 1550
Query: 2305 gtcctttaggtaatctatctttcgagcaaagtaaaactctggagccctaggttcaatgtt 2364
||||| | ||| || |||||| | |||||||| | |||||||||| ||| |||||| |
Sbjct: 1549 atccttcaagtagtcaatcttttgtgcaaagtaccattctggagcccgaggctcaatgct 1490
Query: 2365 gtgtttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttc 2424
|| |||||||| ||||| ||||||||||| | |||||||| || ||||| | ||||||
Sbjct: 1489 gtacttcttgcagaagggcacccatttcctggaaaactctgaagtctcagacaaagcttc 1430
Query: 2425 aaaagtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaa 2477
||| |||||||| || | ||| |||||||| ||||| ||||| ||||||||||
Sbjct: 1429 aaatgtcaacattgcagcaccatcatcagagacatagcatgagactttgtcaa 1377
Score = 113 bits (57), Expect = 4e-023
Identities = 117/137 (85%)
Strand = Plus / Minus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatca 1789
||||| || |||||||| |||||||||||||| ||||| |||||| ||| || ||||||
Sbjct: 2124 catccagtacccacatagacaggtccttgaataccatccagacccctcaagtttatatca 2065
Query: 1790 aagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgt 1849
||||| ||| | || || || ||||||||||||| | ||| || |||||||||||||||
Sbjct: 2064 aagaatacagtattgcgattggcatatcgatcattcctgtcaatgccatcaaatctttgt 2005
Query: 1850 ggaaactgaacatagca 1866
|||||||||||||||||
Sbjct: 2004 ggaaactgaacatagca 1988
Score = 85.7 bits (43), Expect = 9e-015
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||||||||| ||||| |||||||| || | ||||||||| ||||||||||||||||||
Sbjct: 2718 agaatttcaacagaacccagagcccatcgaagcacttggttcagacgatcagaaagatta 2659
Query: 1195 attggagcaga 1205
|| ||||||||
Sbjct: 2658 ataggagcaga 2648
Score = 79.8 bits (40), Expect = 5e-013
Identities = 160/200 (80%)
Strand = Plus / Minus
Query: 691 agagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgccttt 750
||||||||||| ||||||| || || |||||| ||||||| || || || | ||||||
Sbjct: 3162 agagttgtccatttgaacaagtatagttcagcagaatcaccgtcctcgtctgatgccttg 3103
Query: 751 gatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaacaca 810
|| || || |||||||| ||||| || || || || ||||| | | |||||||| |||
Sbjct: 3102 gacgtaacagtgaagttggtgtcaatgccagcaagtactttgagcaagccttggaaaaca 3043
Query: 811 gcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaatcc 870
||||| ||||| || || ||||| |||||||||||||| ||||| |||||||| ||
Sbjct: 3042 gcaaaaagatgggctgaaacaccaccgatgacccaaaactgttcattcctccaccactca 2983
Query: 871 tcaatgccaacaccactcca 890
||||| ||||||||||||||
Sbjct: 2982 tcaatcccaacaccactcca 2963
Score = 69.9 bits (35), Expect = 5e-010
Identities = 77/91 (84%)
Strand = Plus / Minus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
|||||||| ||||| |||| ||||||||||| || ||||| ||||| || || ||||||
Sbjct: 3315 aggaaaggatagagatggacgatcacccagaaagcgaagaaaagcttgccaaagagtgga 3256
Query: 598 ccccatgattggtagccactgttgatagcat 628
|||||||| || || ||||||||||| ||||
Sbjct: 3255 ccccatgactgataaccactgttgattgcat 3225
Score = 65.9 bits (33), Expect = 8e-009
Identities = 75/89 (84%)
Strand = Plus / Minus
Query: 1258 gcatgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatc 1317
||||||||||| || ||||| | ||||||||| |||||||| ||||| |||||||| |||
Sbjct: 2595 gcatgcatcttaaacccagtaagaatatcttctgtaacagaaccatagatccatccaatc 2536
Query: 1318 tctttcccccattctgttttatcctcata 1346
|| ||||| |||||||| ||||||||
Sbjct: 2535 tcagatccccaatctgttttgtcctcata 2507
>gb|AY196961.1| Populus tremuloides cellulose synthase 6 (CesA6) mRNA, complete cds
Length = 3773
Score = 228 bits (115), Expect = 9e-058
Identities = 602/765 (78%)
Strand = Plus / Minus
Query: 1750 aggtccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggtt 1809
|||||||||||||||||||| ||| ||||||| ||||||||||| ||| | ||||||||
Sbjct: 1954 aggtccttgaatgccatctaaacctctcatattgatatcaaagaatacagtattccggtt 1895
Query: 1810 tgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagt 1869
|||||||||||| | ||| || |||||||| || ||||| ||||| ||||||||
Sbjct: 1894 ggcatatcgatcactcctgtcaatgccatcaaacctctgtgggaactggacatagcacac 1835
Query: 1870 tttccttcctagtgctggatccatcatgaaacacatagcctctctaagagctttgctgct 1929
| || | || || ||||||||||||||||||||| || ||||||||||| || ||| |
Sbjct: 1834 tctcttcccaagcaatggatccatcatgaaacacattgcttctctaagagccttactgtt 1775
Query: 1930 attgaagtagtgatcacaatccacattaagaagataagcaccattcgtcaggacagctga 1989
||||| ||||||||||||||||| ||| | |||||| | | |||| || || || || ||
Sbjct: 1774 attgatgtagtgatcacaatccaaattcaaaagatatggagcatttgttagcacggcaga 1715
Query: 1990 tacgcgaatcaaagcattcatggcaccagccttcttgtggtgctggaagcctggcctctt 2049
|| | | |||||||||||| || |||||||| |||||||| | || || || |||||
Sbjct: 1714 gactctgaccaaagcattcatagctccagcctttttgtggtgattaaatccaggtctctt 1655
Query: 2050 ttcacgagaaacataaacaagccgtggcaactcattcccatccgtgtcaagcccaccact 2109
||| | |||||||| || || ||||| || || || ||||| |||||| |||| |||||
Sbjct: 1654 ttctctggaaacatataccagacgtggtaattcgtttccatcagtgtcatgccctccact 1595
Query: 2110 gtggcccaagaatacttggatcattccnggatgatctctagggttattcccaggccangg 2169
||||| | ||| || || |||||||| || ||||| | |||||||||||||| ||
Sbjct: 1594 ttggccaaggaaaacctgaatcattccagggtgatcacggacattattcccaggccatgg 1535
Query: 2170 agtgccatcagccatggtccagccctcctcaggtattttttgcgcttttgcaacaagggc 2229
||| ||||| ||| ||||| || || || || | || || || || ||||| | ||
Sbjct: 1534 agtaccatcctgcattgtccatccatcttctgggaccttatgagccttggcaaccaaagc 1475
Query: 2230 atcgatccgtactttgaactcttcatactccctcttcatagcccgcctttctttcacaaa 2289
|| |||||| | ||| |||||||||||||| |||||||| || | | ||| || |||||
Sbjct: 1474 attgatccgaattttaaactcttcatactctctcttcattgctcttcgttccttgacaaa 1415
Query: 2290 agaaggttgtattttgtcctttaggtaatctatctttcgagcaaagtaaaactctggagc 2349
|||| || | || || || || |||||||||||| ||| ||| |||||||| || ||
Sbjct: 1414 tgaagcctgcaccttatctttcagataatctatcttttgagaaaaataaaactccggtgc 1355
Query: 2350 cctaggttcaatgttgtgtttcttgcaaaagggaacccatttccttgcaaactctgcggt 2409
|| |||||||||| | |||||| || || || ||||||||| ||||||| || | ||
Sbjct: 1354 ccgaggttcaatgctaaatttcttacagaatgggacccatttctttgcaaattcagatgt 1295
Query: 2410 ttcagatagagcttcaaaagtcaacatagctgaaccgtcatcagaaacataacatgatac 2469
||| || | || ||||| |||| |||||| | ||| |||||||||||||||||||| ||
Sbjct: 1294 ttctgacaatgcctcaaatgtcagcatagcagcaccatcatcagaaacataacatgaaac 1235
Query: 2470 tttgtcaacagggtaatccacagcaagaatggacaggacagtgtt 2514
||||||||||||||||| || |||||||||||||| || |||||
Sbjct: 1234 cttgtcaacagggtaatcaactgcaagaatggacagaaccgtgtt 1190
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 1282 atatcttcagtaacagagccatatatccatccgatctctttcccccattctgttttatcc 1341
||||| || |||||||| ||||| ||||| || | |||||| |||||||||||||||||
Sbjct: 2427 atatcctctgtaacagaaccataaatccaccctacctctttgccccattctgttttatct 2368
Query: 1342 tcata 1346
|||||
Sbjct: 2367 tcata 2363
Score = 50.1 bits (25), Expect = 5e-004
Identities = 100/125 (80%)
Strand = Plus / Minus
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagt 594
||||||||||| || ||||| | |||||||||| ||||||||| ||||| || || ||
Sbjct: 3171 ttcaggaaaggataaaggtgaactatcacccagaatgcaaagaaaagcttaccaaacaga 3112
Query: 595 ggaccccatgattggtagccactgttgatagcatacgacactccagccactataccaacc 654
|| |||||||| | || ||| | || ||||||| ||| || |||||||| | ||||||
Sbjct: 3111 ggcccccatgactcatacccattatttatagcattcgagacaccagccacgactccaacc 3052
Query: 655 aggtt 659
|||||
Sbjct: 3051 aggtt 3047
Score = 44.1 bits (22), Expect = 0.029
Identities = 82/102 (80%)
Strand = Plus / Minus
Query: 2620 tctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagcca 2679
||||||||| |||||||| | || ||||| |||||||||||| ||||| |||| |||
Sbjct: 1084 tctatcgagataagtttccctgtcaatagggagccactttgggaattgatcaagaatcca 1025
Query: 2680 agacaaagcaaaccaaacttcacaaataacagatacaagcca 2721
|| | |||||||||| ||||| || ||||||| ||||||
Sbjct: 1024 tgaaacggcaaaccaaatctcacagatcacagatataagcca 983
Score = 42.1 bits (21), Expect = 0.12
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 856 tttctccaccaatcctcaatgccaacaccactccatc 892
||||||||||| || ||||| ||||| ||||||||||
Sbjct: 2853 tttctccaccactcgtcaataccaaccccactccatc 2817
Score = 40.1 bits (20), Expect = 0.46
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1177 agacgatcagaaagattaat 1196
||||||||||||||||||||
Sbjct: 2532 agacgatcagaaagattaat 2513
>gb|CA925680.1|CA925680 MTU7TL.P4.E11 Aspen leaf cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 708
Score = 220 bits (111), Expect = 2e-055
Identities = 503/634 (79%)
Strand = Plus / Plus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| |||||| ||||||||||| ||||| |||||||| ||||| ||||||| |||
Sbjct: 75 agaagagatgtccatttgaacacataaagctctgcaaaatccccatcctcatcggatgct 134
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
||||| ||||| |||||||| || ||||| ||||| |||||||| || || ||||||||
Sbjct: 135 tttgaagtgacagtgaagttggtatcgatacctgcaagcactttcaaaagcccttggaag 194
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|||||||||||||| || || |||||||| || ||||| || || ||||| ||||||||
Sbjct: 195 acagcaaagagatgagctgacgtgccaccgatcacccagaattgttcattcctccaccag 254
Query: 868 tcctcaatgccaacaccactccatcgaagctccaaaataccagtggcgaagatagaagca 927
|| ||||| ||||| |||||||||| |||||| | || |||||||| ||||| ||
Sbjct: 255 tcttcaataccaactccactccatctaagctcaagtattccagtggcaaagatggagatg 314
Query: 928 aaaagcaggatgaagaacgccccagcataattgctaatcgcaggaataataaatttgttg 987
||||| || ||||| || ||||| || || |||||| ||||||||||||||||
Sbjct: 315 aaaaggagaatgaaccacatgccagcgtagttactaatctcaggaataataaattttcca 374
Query: 988 gtgagtaaacagatagcaggaaggacgcagtatgctactagtgggatagatgtaattgga 1047
|||| || || || |||||||| | ||||| || | ||||| | |||||| | |||
Sbjct: 375 gtgactaggcaaatggcaggaagtatacagtaagcaagcagtggaagagatgttagtggg 434
Query: 1048 taaacaatggtgttgatgtatgccagtctctccagaagctttagccttccattgtaacca 1107
||||| ||||| || |||||||| || ||||||| |||||||| |||||| |||| |||
Sbjct: 435 taaacgatggtattaatgtatgctagcctctccaagagctttagtcttccactgtatcca 494
Query: 1108 taccagataggacagtgtctgctaagtagaatttcaactgaaccaagagcccagcgtaac 1167
||||| || || || || ||||| || | ||| |||| || || | ||||| || |
Sbjct: 495 taccatatggggcaatgcctgctcagcaaaatctcaatagatcccaaggcccatcgaaga 554
Query: 1168 acttggttgagacgatcagaaagattaattggagcagaacccttgaagcaaggccgaagt 1227
|| ||||| | |||||||||||||| || |||||||| ||||| || || ||| |
Sbjct: 555 acctggttcaatcgatcagaaagattgataggagcagaccccttaaatgctgggcgagga 614
Query: 1228 ggcatgcagtagatggatatccaacctcttgcatgcatcttgaaaccagttaaaatatct 1287
|||||||| ||||| |||||||| || | ||||||||||| | ||||| |||||||||
Sbjct: 615 ggcatgcaatagattgatatccagccacgagcatgcatcttngacccagtcaaaatatct 674
Query: 1288 tcagtaacagagccatatatccatccgatctctt 1321
||||||||||| ||||| |||||||| |||||||
Sbjct: 675 tcagtaacagaaccatagatccatccaatctctt 708
>gb|CA931952.1|CA931952 MTU4TA.P25.A10 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 629
Score = 176 bits (89), Expect = 3e-042
Identities = 244/294 (82%), Gaps = 2/294 (0%)
Strand = Plus / Plus
Query: 1886 ggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatca 1945
||||||||||||||||||||||| ||||| | ||| ||||| | || | ||||||||||
Sbjct: 323 ggatccatcatgaaacacatagcttctctcaaagccttgctattgtttacgtagtgatca 382
Query: 1946 caatccacatt-aagaagataagcaccattcgtcaggacagctgatacgcgaatcaaagc 2004
|| || | ||| || |||| | || ||||| || || ||||||||||| |||| | ||
Sbjct: 383 cagtcaagattcaacaagaaaggc-ccattagttagcacagctgatacacgaacaagtgc 441
Query: 2005 attcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacata 2064
||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 442 attcatggcaccagctttcttgtggtgctggaagcctggacgcttttcacgagaaacata 501
Query: 2065 aacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaatac 2124
||| | |||||||| |||||| ||||| || |||||||| ||||| || || ||||| ||
Sbjct: 502 aactaaccgtggcagctcattaccatcagtatcaagccctccactttgccctaagaaaac 561
Query: 2125 ttggatcattccnggatgatctctagggttattcccaggccanggagtgccatc 2178
|| |||||||| ||||| ||||| | |||||| ||||||| || || |||||
Sbjct: 562 ctgaatcattcctggatggtctctggtgttatttncaggccatggggtcccatc 615
Score = 81.8 bits (41), Expect = 1e-013
Identities = 113/137 (82%)
Strand = Plus / Plus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatca 1789
||||| || ||| |||| |||||||||||||| ||||| | |||| || || ||||||
Sbjct: 167 catccagtgcccgcatagacaggtccttgaataccatccaaaccccccaagtttatatca 226
Query: 1790 aagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgt 1849
||||| ||| | || || || ||||||||||||| | ||| || |||||||||||||||
Sbjct: 227 aagaacacagtattgcgattggcatatcgatcattcttgtcaatgccatcaaatctttgt 286
Query: 1850 ggaaactgaacatagca 1866
||||| |||||||||||
Sbjct: 287 ggaaattgaacatagca 303
>gb|CA932078.1|CA932078 MTU4TA.P26.F03 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 596
Score = 167 bits (84), Expect = 3e-039
Identities = 233/279 (83%), Gaps = 3/279 (1%)
Strand = Plus / Plus
Query: 1886 ggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatca 1945
||||||||||||||||||||||| ||||| | ||| ||||| | || | ||||||||||
Sbjct: 320 ggatccatcatgaaacacatagcttctctcaaagccttgctattgtttacgtagtgatca 379
Query: 1946 caatccacatt-aagaagataagcaccattcgtcaggacagctgatacgcgaatcaaagc 2004
|| || | ||| || |||| | || ||||| || || ||||||||||| |||| | ||
Sbjct: 380 cagtcaagattcaacaagaaaggc-ccattagttagcacagctgatacacgaacaagtgc 438
Query: 2005 attcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacata 2064
||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 439 attcatggcaccagctttcttgtggtgctggaagcctggacgcttttcacgagaaacata 498
Query: 2065 aacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaatac 2124
||| | |||||||| |||||| ||||| || |||||||| ||||| || || ||||| ||
Sbjct: 499 aactaaccgtggcagctcattaccatcagtatcaagccctccactttgccctaagaa-ac 557
Query: 2125 ttggatcattccnggatgatctctagggttattcccagg 2163
|| |||||||| ||||| ||||| | |||||| |||||
Sbjct: 558 ctgaatcattcctggatggtctctggtgttatttccagg 596
Score = 89.7 bits (45), Expect = 6e-016
Identities = 114/137 (83%)
Strand = Plus / Plus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatca 1789
||||| || |||||||| |||||||||||||| ||||| | |||| || || ||||||
Sbjct: 164 catccagtgcccacatagacaggtccttgaataccatccaaaccccccaagtttatatca 223
Query: 1790 aagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgt 1849
||||| ||| | || || || ||||||||||||| | ||| || |||||||||||||||
Sbjct: 224 aagaacacagtattgcgattggcatatcgatcattcttgtcaatgccatcaaatctttgt 283
Query: 1850 ggaaactgaacatagca 1866
||||| |||||||||||
Sbjct: 284 ggaaattgaacatagca 300
>gb|DV466097.1|DV466097 MTUNUL1.P47.C03 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 857
Score = 159 bits (80), Expect = 7e-037
Identities = 179/212 (84%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||||| |||||| ||||||||||| ||||| |||||||| ||||| ||||| | |||
Sbjct: 351 agaagagatgtccatttgaacacataaagctctgcaaaatccccatcctcatcagatgct 292
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
||||| ||||| |||||||| || || || ||||| |||||||| || || ||||||||
Sbjct: 291 tttgaagtgacagtgaagttggtatcaatacctgcaagcactttcaaaagcccttggaag 232
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|||||||||||||| || || |||||||| || |||||||| || ||||| ||||||||
Sbjct: 231 acagcaaagagatgagctgatgtgccaccgatcacccaaaattgttcattcctccaccag 172
Query: 868 tcctcaatgccaacaccactccatcgaagctc 899
|| ||||| ||||| |||||||||| ||||||
Sbjct: 171 tcttcaataccaactccactccatctaagctc 140
Score = 36.2 bits (18), Expect = 7.2
Identities = 39/46 (84%)
Strand = Plus / Minus
Query: 431 tgaaggggtcgatcttcacccacagcagcgagaatatggaagcaag 476
||||||||||||| |||||| |||| ||||| |||||||||||
Sbjct: 610 tgaaggggtcgatgcgcacccatagcaaggagaaaatggaagcaag 565
>gb|DT500468.1|DT500468 PX0015.BR_I21 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0015_I21
5', mRNA sequence
Length = 687
Score = 153 bits (77), Expect = 4e-035
Identities = 271/338 (80%)
Strand = Plus / Minus
Query: 562 acccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttg 621
||||| || |||||||| ||||| || || || ||||||||||| ||||| ||||||||
Sbjct: 345 acccaaatagcaaagaagagcttgccaaagagaggaccccatgactggtatccactgttt 286
Query: 622 atagcatacgacactccagccactataccaaccaggttaatcacaagcacagtggtnnnn 681
|| ||||| ||||| |||||||| ||||| |||| ||| | | || || |||||
Sbjct: 285 atggcataggacacaccagccacaatacccaccatgtttagtaaaatgactgtggttgga 226
Query: 682 nnnatcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcg 741
|| ||||||| |||||| ||||||||||| ||||| |||||||| ||||| |||||
Sbjct: 225 gggatgagaagagatgtccatttgaacacataaagctctgcaaaatccccatcttcatca 166
Query: 742 gttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagacct 801
| ||||||||| ||||| |||||||| || || || ||||| ||||| || || || |||
Sbjct: 165 gatgcctttgaagtgacagtgaagttggtatcaatacctgcaagcaccttcaaaagtcct 106
Query: 802 tggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctc 861
|| || || ||||||||||| || || || ||||| |||||||| || || ||||| |||
Sbjct: 105 tgaaagacggcaaagagatgagctgatgtaccaccgatgacccagaattgttcattcctc 46
Query: 862 caccaatcctcaatgccaacaccactccatcgaagctc 899
||||| || ||||| ||||| |||||||||| ||||||
Sbjct: 45 caccagtcttcaataccaactccactccatctaagctc 8
>gb|CV244615.1|CV244615 WS0255.B21_C09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0255_C09
3', mRNA sequence
Length = 402
Score = 149 bits (75), Expect = 7e-034
Identities = 171/203 (84%)
Strand = Plus / Minus
Query: 1750 aggtccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggtt 1809
|||||||||||||||||| | ||| ||||||| ||||||||||| ||| ||||||||||
Sbjct: 209 aggtccttgaatgccatccaaacctctcatattgatatcaaagaatacagtgttccggtt 150
Query: 1810 tgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagt 1869
|||||||||||| | ||| || |||||||| || ||||| ||||| ||||||||
Sbjct: 149 ggcatatcgatcactcctgtcaatgccatcaaacctctgtgggaactggacatagcacac 90
Query: 1870 tttccttcctagtgctggatccatcatgaaacacatagcctctctaagagctttgctgct 1929
| || |||| ||| ||||||||||||||||||||| || ||||||||||| || ||| |
Sbjct: 89 tctctttccaagtaatggatccatcatgaaacacattgcttctctaagagccttactgtt 30
Query: 1930 attgaagtagtgatcacaatcca 1952
||||| |||||||||||||||||
Sbjct: 29 attgatgtagtgatcacaatcca 7
>gb|DT489371.1|DT489371 WS02542.B21_A18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02542_A18 3', mRNA sequence
Length = 402
Score = 149 bits (75), Expect = 7e-034
Identities = 171/203 (84%)
Strand = Plus / Minus
Query: 1750 aggtccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggtt 1809
|||||||||||||||||| | ||| ||||||| ||||||||||| ||| ||||||||||
Sbjct: 209 aggtccttgaatgccatccaaacctctcatattgatatcaaagaatacagtgttccggtt 150
Query: 1810 tgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagt 1869
|||||||||||| | ||| || |||||||| || ||||| ||||| ||||||||
Sbjct: 149 ggcatatcgatcactcctgtcaatgccatcaaacctctgtgggaactggacatagcacac 90
Query: 1870 tttccttcctagtgctggatccatcatgaaacacatagcctctctaagagctttgctgct 1929
| || |||| ||| ||||||||||||||||||||| || ||||||||||| || ||| |
Sbjct: 89 tctctttccaagtaatggatccatcatgaaacacattgcttctctaagagccttactgtt 30
Query: 1930 attgaagtagtgatcacaatcca 1952
||||| |||||||||||||||||
Sbjct: 29 attgatgtagtgatcacaatcca 7
>gb|AJ778476.1|AJ778476 AJ778476 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000600001D07F1, mRNA sequence
Length = 677
Score = 139 bits (70), Expect = 7e-031
Identities = 217/266 (81%)
Strand = Plus / Minus
Query: 1066 tatgccagtctctccagaagctttagccttccattgtaaccataccagataggacagtgt 1125
||||| || ||||||| |||||||| ||||||||||| |||||||| || || || ||
Sbjct: 331 tatgctagcctctccaaaagctttaatcttccattgtatccataccatatggggcaatgc 272
Query: 1126 ctgctaagtagaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatca 1185
||||| |||| ||| |||| || || | ||||| || | || ||||| | |||||||
Sbjct: 271 ctgctcagtaaaatctcaatagatcccaaggcccatcgaagaacctggttcaaacgatca 212
Query: 1186 gaaagattaattggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggat 1245
|||||||| || |||||||| ||||| || ||| ||| | |||||||| ||||| |||
Sbjct: 211 gaaagattgataggagcagagcccttaaatgcagggcgaggaggcatgcaatagattgat 152
Query: 1246 atccaacctcttgcatgcatcttgaaaccagttaaaatatcttcagtaacagagccatat 1305
|||||||| | |||||||||||||| ||||| ||||||||||| |||||||| |||||
Sbjct: 151 atccaaccacgagcatgcatcttgaacccagtcaaaatatcttctgtaacagaaccatag 92
Query: 1306 atccatccgatctctttcccccattc 1331
|||||||| |||||||| ||||||||
Sbjct: 91 atccatccaatctctttgccccattc 66
>gb|CA930801.1|CA930801 MTU2TA.P10.D08 Aspen apex cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 530
Score = 133 bits (67), Expect = 4e-029
Identities = 174/207 (84%), Gaps = 2/207 (0%)
Strand = Plus / Plus
Query: 1886 ggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatca 1945
||||||||||||||||||||||| ||||| | ||| | ||| | || | ||||||||||
Sbjct: 323 ggatccatcatgaaacacatagcttctctcaaagcctcgctattgtttacgtagtgatca 382
Query: 1946 caatccacatt-aagaagataagcaccattcgtcaggacagctgatacgcgaatcaaagc 2004
|| || | ||| || |||| | || ||||| || || ||||||||||| |||| | ||
Sbjct: 383 cagtcaagattcaacaagaaaggc-ccattagttagcacagctgatacacgaacaagtgc 441
Query: 2005 attcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacata 2064
||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 442 attcatggcaccagctttcttgtggtgctggaagcctggacgcttttcacgagaaacata 501
Query: 2065 aacaagccgtggcaactcattcccatc 2091
||| | |||||||| |||||| |||||
Sbjct: 502 aactaaccgtggcagctcattaccatc 528
Score = 97.6 bits (49), Expect = 2e-018
Identities = 115/137 (83%)
Strand = Plus / Plus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatca 1789
||||| || |||||||| |||||||||||||| ||||| | |||| ||| || ||||||
Sbjct: 167 catccagtgcccacatagacaggtccttgaataccatccaaacccctcaagtttatatca 226
Query: 1790 aagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgt 1849
||||| ||| | || || || ||||||||||||| | ||| || |||||||||||||||
Sbjct: 227 aagaacacagtattgcgattggcatatcgatcattcttgtcaatgccatcaaatctttgt 286
Query: 1850 ggaaactgaacatagca 1866
||||| |||||||||||
Sbjct: 287 ggaaattgaacatagca 303
>gb|DT493063.1|DT493063 WS02553.C21_E11 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02553_E11 3', mRNA sequence
Length = 774
Score = 127 bits (64), Expect = 3e-027
Identities = 243/305 (79%)
Strand = Plus / Plus
Query: 562 acccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttg 621
||||| || |||||||| ||||| || || || ||||||||||| ||||| ||||||||
Sbjct: 451 acccaaatagcaaagaagagcttgccaaagagaggaccccatgactggtatccactgttt 510
Query: 622 atagcatacgacactccagccactataccaaccaggttaatcacaagcacagtggtnnnn 681
|| ||||| ||||| |||||||| ||||| |||| ||| | | || || |||||
Sbjct: 511 atggcataggacacaccagccacaatacccaccatgtttagtaaaatgactgtggttgga 570
Query: 682 nnnatcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcg 741
|| ||||||| |||||| ||||||||||| ||||| |||||||| ||||| |||||
Sbjct: 571 gggatgagaagagatgtccatttgaacacataaagctctgcaaaatccccatcttcatca 630
Query: 742 gttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagacct 801
| ||||||||| ||||| |||||||| || || || ||||| ||||| || || || |||
Sbjct: 631 gatgcctttgaagtgacagtgaagttggtatcaatacctgcaagcaccttcaaaagtcct 690
Query: 802 tggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctc 861
|| || || ||||||||||| || || || ||||| |||||||| || || ||||| |||
Sbjct: 691 tgaaagacggcaaagagatgagctgatgtaccaccgatgacccagaattgttcattcctc 750
Query: 862 cacca 866
|||||
Sbjct: 751 cacca 755
>gb|CX169886.1|CX169886 G10_69-94_14.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 620
Score = 125 bits (63), Expect = 1e-026
Identities = 211/258 (81%), Gaps = 2/258 (0%)
Strand = Plus / Minus
Query: 1886 ggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatca 1945
||||||||||||||||||||||| ||||| | ||| ||||| | || | ||| ||||||
Sbjct: 274 ggatccatcatgaaacacatagcttctctcaaagccttgctattgtttatgtaatgatca 215
Query: 1946 caatccacatt-aagaagataagcaccattcgtcaggacagctgatacgcgaatcaaagc 2004
||||| | ||| || |||| | || ||||| || || || |||||||| |||| | |
Sbjct: 214 caatcaagattcaacaagaaaggc-ccattagttagaacggctgatacacgaacaagtga 156
Query: 2005 attcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacata 2064
|||||||||||| || |||||||||||||||||||| || | ||||||||||||||||||
Sbjct: 155 attcatggcaccggctttcttgtggtgctggaagcccggacgcttttcacgagaaacata 96
Query: 2065 aacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaatac 2124
||| | ||| || | |||||| ||||| | |||||||| ||||| ||||||||||| ||
Sbjct: 95 aactaaccgcggaagctcattaccatcagaatcaagccctccactttggcccaagaaaac 36
Query: 2125 ttggatcattccnggatg 2142
|| |||||||| |||||
Sbjct: 35 ctgaatcattcctggatg 18
Score = 113 bits (57), Expect = 4e-023
Identities = 117/137 (85%)
Strand = Plus / Minus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatca 1789
||||| || |||||||| |||||||||||||| ||||| |||||| ||| || ||||||
Sbjct: 430 catccagtacccacatagacaggtccttgaataccatccagacccctcaagtttatatca 371
Query: 1790 aagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgt 1849
||||| ||| | || || || ||||||||||||| | ||| || |||||||||||||||
Sbjct: 370 aagaatacagtattgcgattggcatatcgatcattcctgtcaatgccatcaaatctttgt 311
Query: 1850 ggaaactgaacatagca 1866
|||||||||||||||||
Sbjct: 310 ggaaactgaacatagca 294
>gb|DT500162.1|DT500162 PX0011.BR_G15 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0011_G15
5', mRNA sequence
Length = 701
Score = 121 bits (61), Expect = 2e-025
Identities = 178/217 (82%)
Strand = Plus / Minus
Query: 1697 tcatagccatacaaggcctgcctattgaaacagcatcctgttcccacataaacaggtcct 1756
|||||||||||||| || ||||| |||||| ||||||||| |||||||| || || ||
Sbjct: 355 tcatagccatacaaagcttgccttttgaaaacgcatcctgtgcccacatacactggaccc 296
Query: 1757 tgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggtttgcatat 1816
||||| ||||||||||||||||| |||||||||||||| ||| |||| | ||| || |||
Sbjct: 295 tgaattccatctagacccttcatgttaatatcaaagaaaacagtgtttctgttggcgtat 236
Query: 1817 cgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagttttcctt 1876
|||||||| || || |||||||||||||| ||||| || || |||||| |||| ||
Sbjct: 235 cgatcatgtgtatcaatgccatcaaatctttgaggaaattgcacgtagcaaactttcttt 176
Query: 1877 cctagtgctggatccatcatgaaacacatagcctctc 1913
|| | || ||||||| |||||||||||||||||
Sbjct: 175 ccaatctgggggtccatcaagaaacacatagcctctc 139
>gb|CB239511.1|CB239511 RSH12F10 two-month-old roots from clone 'Beaupre' grown for 19 days
under restricted irrigation Populus trichocarpa x
Populus deltoides cDNA 5', mRNA sequence
Length = 606
Score = 119 bits (60), Expect = 6e-025
Identities = 168/204 (82%)
Strand = Plus / Minus
Query: 696 tgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcctttgatgt 755
|||||| ||||||||||| ||||| |||||||| ||||| ||||| | |||||||| ||
Sbjct: 593 tgtccatttgaacacataaagctctgcaaaatccccatcttcatcagaagcctttgaagt 534
Query: 756 gaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaacacagcaaa 815
||| |||||||| || || || ||||| ||||| || || || ||||| || || |||||
Sbjct: 533 gacagtgaagttggtatcaatacctgcaagcaccttcaaaagtccttgaaagacggcaaa 474
Query: 816 gagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaatcctcaat 875
|||||| || || || ||||| |||||||| || || ||||| |||||||| || |||||
Sbjct: 473 gagatgagctgatgtaccaccgatgacccagaattgttcattcctccaccagtcttcaat 414
Query: 876 gccaacaccactccatcgaagctc 899
||||| |||||||||| ||||||
Sbjct: 413 accaactccactccatctaagctc 390
Score = 58.0 bits (29), Expect = 2e-006
Identities = 77/93 (82%)
Strand = Plus / Minus
Query: 1179 acgatcagaaagattaattggagcagaacccttgaagcaaggccgaagtggcatgcagta 1238
||||||||||||||| || |||||||| ||||| || || ||| | |||||||| ||
Sbjct: 110 acgatcagaaagattgataggagcagaccccttaaatgctgggcgaggaggcatgcaata 51
Query: 1239 gatggatatccaacctcttgcatgcatcttgaa 1271
||| ||||||||||| | ||||||||||||||
Sbjct: 50 gattgatatccaaccacgagcatgcatcttgaa 18
>gb|AJ771596.1|AJ771596 AJ771596 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0001600003B06F1, mRNA sequence
Length = 575
Score = 119 bits (60), Expect = 6e-025
Identities = 165/200 (82%)
Strand = Plus / Minus
Query: 1658 ataatgttaggctccaaatcagcttctgtcaatacaggatcatagccatacaaggcctgc 1717
|||||||| || |||||||| | |||||||| || |||||||| ||||||| ||| |||
Sbjct: 211 ataatgtttggttccaaatcttcctctgtcaaaactggatcataaccatacagggcttgc 152
Query: 1718 ctattgaaacagcatcctgttcccacataaacaggtccttgaatgccatctagacccttc 1777
| ||||||||||| || ||||| ||||| ||||| || || ||||| || |||||||||
Sbjct: 151 cggttgaaacagcaaccagttccaacatacacaggcccctggatgccgtccagacccttc 92
Query: 1778 atattaatatcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctatacca 1837
| || ||||||||||| ||||| || || || ||||||||||| |||||||| || |||
Sbjct: 91 aagttgatatcaaagaaaacaatattgcgattggcatatcgatcgtgcaagtcaatgcca 32
Query: 1838 tcaaatctttgtggaaactg 1857
||||| | |||||| |||||
Sbjct: 31 tcaaaacgttgtgggaactg 12
Score = 67.9 bits (34), Expect = 2e-009
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 1447 tgcaataaaaattggagactggccaaagcgtttctccaagctcttctgagacataagcag 1506
||||||||||| ||| ||||| ||||| || || || || |||||||| |||||||||||
Sbjct: 429 tgcaataaaaactggtgactgaccaaaacgcttttctaaactcttctgcgacataagcag 370
Query: 1507 tgacctttcatcctcgtaaccttcaa 1532
|||||| ||||| || || |||||||
Sbjct: 369 tgacctctcatcatcatatccttcaa 344
>gb|CF235713.1|CF235713 PtaJXT0026B7B0703 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 639
Score = 115 bits (58), Expect = 1e-023
Identities = 133/158 (84%)
Strand = Plus / Minus
Query: 1697 tcatagccatacaaggcctgcctattgaaacagcatcctgttcccacataaacaggtcct 1756
|||||||||||||| || ||||| |||||| ||||||||| |||||||| || || ||
Sbjct: 588 tcatagccatacaaagcttgccttttgaaaacgcatcctgtgcccacatacactggaccc 529
Query: 1757 tgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggtttgcatat 1816
||||| ||||||||||||||||| |||||||||||||| ||| |||| | ||| || |||
Sbjct: 528 tgaattccatctagacccttcatgttaatatcaaagaaaacagtgtttctgttggcgtat 469
Query: 1817 cgatcatgcaagtctataccatcaaatctttgtggaaa 1854
|||||||| || || |||||||||||||| |||||
Sbjct: 468 cgatcatgtgtatcaatgccatcaaatctttgaggaaa 431
>gb|DT476519.1|DT476519 WS01229.B21_N17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_N17 3', mRNA sequence
Length = 853
Score = 115 bits (58), Expect = 1e-023
Identities = 178/218 (81%)
Strand = Plus / Plus
Query: 693 agttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcctttga 752
||||||||||||||||| ||| ||||| | |||||||||||| ||||||| ||| |||||
Sbjct: 636 agttgtccacttgaacatatatagctcggtaaaatcaccatcttcatcggatgcttttga 695
Query: 753 tgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaacacagc 812
||||| || || || || || || || || || ||||| | || |||||||| |||||
Sbjct: 696 agtgacagtaaaattggtatctattccagcaaggactttcagcaggccttggaagacagc 755
Query: 813 aaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaatcctc 872
||| ||||| || || || ||||| ||||| |||||||||||||||||||| || ||
Sbjct: 756 aaatagatgagctgacacacctccaataacccagaactgctcatttctccaccattcgtc 815
Query: 873 aatgccaacaccactccatcgaagctccaaaataccag 910
||| |||||||||||||||| | |||||||||||||
Sbjct: 816 aatcccaacaccactccatctcatttccaaaataccag 853
Score = 61.9 bits (31), Expect = 1e-007
Identities = 97/119 (81%)
Strand = Plus / Plus
Query: 523 cccatgagacccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagc 582
||||| |||||||| ||||||||||| || || | |||||||||| |||||||| |||
Sbjct: 465 cccatcagacccttgaggaaagggtaaagatgaataatcacccagaaagcaaagaaaagc 524
Query: 583 ttcccgaatagtggaccccatgattggtagccactgttgatagcatacgacactccagc 641
|| || || || |||||||| ||||| || |||||||| || || || || ||||||||
Sbjct: 525 ttgccaaagaggggaccccaagattgataaccactgtttatggcgtaggagactccagc 583
>gb|AY095297.1| Populus tremuloides cellulose synthase (CesA2) mRNA, complete cds
Length = 3277
Score = 109 bits (55), Expect = 6e-022
Identities = 142/171 (83%)
Strand = Plus / Minus
Query: 1697 tcatagccatacaaggcctgcctattgaaacagcatcctgttcccacataaacaggtcct 1756
|||||||||||||| || ||||| |||||| ||||||||| |||||||| || || ||
Sbjct: 1879 tcatagccatacaaagcttgccttttgaaaacgcatcctgtgcccacatacactggaccc 1820
Query: 1757 tgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggtttgcatat 1816
||||| ||||||||||||||||| |||||||| ||||| ||| |||| | ||| || |||
Sbjct: 1819 tgaattccatctagacccttcatgttaatatcgaagaaaacagtgtttctgttggcgtat 1760
Query: 1817 cgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaa 1867
|||||||| || || |||||||||||||| ||||| || || ||||||
Sbjct: 1759 cgatcatgtgtatcaatgccatcaaatctttgaggaaattgcacgtagcaa 1709
Score = 87.7 bits (44), Expect = 2e-015
Identities = 116/140 (82%)
Strand = Plus / Minus
Query: 502 gtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatc 561
|||||||| | ||| ||| ||||||| ||||| || ||||| |||||||| |||| |||
Sbjct: 2998 gtcggtgtcctgttttgcctccccattagacctttgaggaatgggtagagatggacaatc 2939
Query: 562 acccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttg 621
||||||| |||||||| |||||||||||||| || |||||||| ||||| ||| ||||
Sbjct: 2938 acccagaaggcaaagaagagcttcccgaatagaggtccccatgactggtacccattgttt 2879
Query: 622 atagcatacgacactccagc 641
|| |||| || ||||||||
Sbjct: 2878 atggcatctgagactccagc 2859
Score = 73.8 bits (37), Expect = 3e-011
Identities = 109/133 (81%)
Strand = Plus / Minus
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
||||| |||||||| ||||||||| |||||| ||||||| ||||| | |||||||||
Sbjct: 2758 gccttggatgtgacagtgaagtttaggtcgatacctgctaaaactttcagaagaccttgg 2699
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
| ||||||||||| || ||||| ||||| || ||||| || ||||| |||||||||
Sbjct: 2698 acaacagcaaagaggtgagcagacacaccacctataacccagaattgctcgtttctccac 2639
Query: 865 caatcctcaatgc 877
|| ||||||||||
Sbjct: 2638 cattcctcaatgc 2626
Score = 61.9 bits (31), Expect = 1e-007
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 1137 aatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaat 1196
||||||||| || |||||||||||||| | ||||||||| || ||||| || ||||| ||
Sbjct: 2363 aatttcaacagatccaagagcccagcggagcacttggtttagccgatctgatagattgat 2304
Query: 1197 tggagcagaaccctt 1211
||||| ||||||||
Sbjct: 2303 gggagctgaaccctt 2289
Score = 48.1 bits (24), Expect = 0.002
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 2510 gtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaagacatcg 2569
|||||||| || | |||||| ||||| || | ||||||||| ||||| |||||||||||
Sbjct: 1066 gtgttgcccgtgactagagggggttctttcattggatccacggtactgacaaagacatcc 1007
Query: 2570 attggagc 2577
| ||||||
Sbjct: 1006 actggagc 999
Score = 46.1 bits (23), Expect = 0.007
Identities = 104/131 (79%)
Strand = Plus / Minus
Query: 2213 gcttttgcaacaagggcatcgatccgtactttgaactcttcatactccctcttcatagcc 2272
|||||||| |||| |||| ||||| || ||||| |||||||| || |||||||||||
Sbjct: 1363 gcttttgctacaatcgcatttatccgaaccttgaattcttcatattctctcttcatagct 1304
Query: 2273 cgcctttctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagca 2332
|| | ||| || ||||| | || || | ||||||||| |||||||| | |||| |||
Sbjct: 1303 cgacgttccttaacaaaggttggctgaactttgtccttgaggtaatcaacctttagagtg 1244
Query: 2333 aagtaaaactc 2343
|||||||||||
Sbjct: 1243 aagtaaaactc 1233
>gb|BP924070.1|BP924070 BP924070 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-027_K15.f 5', mRNA sequence
Length = 535
Score = 105 bits (53), Expect = 9e-021
Identities = 152/185 (82%)
Strand = Plus / Minus
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||||||||| ||||| |||||||| || | ||||||||| ||||||||||||||||||
Sbjct: 505 agaatttcaacagaacctagagcccatcgaagcacttggttcagacgatcagaaagatta 446
Query: 1195 attggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggatatccaacct 1254
|| |||||||| || || ||| || || ||||||||||| || || ||||||
Sbjct: 445 ataggagcagaccctttaaaggctgggcgtttgggcatgcagtaaattgaccgccaacca 386
Query: 1255 cttgcatgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccg 1314
| |||||||||||||| ||||| | ||||||||| |||||||| ||||| ||||||||
Sbjct: 385 cgggcatgcatcttgaatccagtaagaatatcttctgtaacagaaccatagatccatcct 326
Query: 1315 atctc 1319
|||||
Sbjct: 325 atctc 321
Score = 40.1 bits (20), Expect = 0.46
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1526 ccttcaaatccctcttctatatcttcca 1553
||||||| |||||||||||||||||||
Sbjct: 121 ccttcaacgccctcttctatatcttcca 94
>gb|CN524693.1|CN524693 GQ015M08.T3_H02 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M08_H02 5', mRNA sequence
Length = 770
Score = 103 bits (52), Expect = 4e-020
Identities = 183/227 (80%)
Strand = Plus / Minus
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|||||||||||| || |||||||| || || ||||| | || || |||||||||||
Sbjct: 612 tttagccttccacnatagccataccatatggggcagtgacgactgagaagaatttcaacg 553
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
||||| | ||||| || | |||||| || |||||||||||||||||||| ||||||||
Sbjct: 552 gaacccaaggcccaccgaagcacttgatttagacgatcagaaagattaatgggagcagat 493
Query: 1207 cccttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatc 1266
||||| ||| ||| || ||||||||| ||||| ||| |||| || | |||||||||
Sbjct: 492 cccttaaaggcaggacgctttggcatgcaatagattgatctccacccacgagcatgcatc 433
Query: 1267 ttgaaaccagttaaaatatcttcagtaacagagccatatatccatcc 1313
||||| || || | |||||||| |||||||| ||||||||||||||
Sbjct: 432 ttgaatcctgtaaggatatcttccgtaacagaaccatatatccatcc 386
>gb|AF081534.1|AF081534 Populus x canescens cellulose synthase (cel1) mRNA, complete cds
Length = 3395
Score = 103 bits (52), Expect = 4e-020
Identities = 270/340 (79%), Gaps = 2/340 (0%)
Strand = Plus / Minus
Query: 1693 aggatcatagccatacaaggcctgcctattgaa-acagcatcctgttcccacataaacag 1751
|||||||||||||||||||| |||||| ||||| ||| ||||| || || ||||| || |
Sbjct: 1805 aggatcatagccatacaaggactgcctgttgaagaca-catccagtaccaacatatactg 1747
Query: 1752 gtccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggtttg 1811
| ||||||| ||||||||||| ||||| || ||||||||||| |||| ||| || || |
Sbjct: 1746 gcccttgaaccccatctagacctttcatgtttatatcaaagaacacaacgttgcgattag 1687
Query: 1812 catatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagttt 1871
|||||| |||||| || ||||||||||| || || |||||||| |||||||| |
Sbjct: 1686 catatctatcatggcgatcgataccatcaaacctctgcggaaactggacatagcagagct 1627
Query: 1872 tccttcctagtgctggatccatcatgaaacacatagcctctctaagagctttgctgctat 1931
|| | || ||| |||||||||| || ||||| || ||||| | ||| |||||| |||
Sbjct: 1626 tcttcccaagttggggatccatcaaaaagcacatggcttctcttacagccttgctgttat 1567
Query: 1932 tgaagtagtgatcacaatccacattaagaagataagcaccattcgtcaggacagctgata 1991
||| ||| || |||||||||| ||| | | | ||| |||| || || || ||||| |
Sbjct: 1566 tgatgtaatggtcacaatccaaattcaacataaaaggtgcattggtgagcactgctgaga 1507
Query: 1992 cgcgaatcaaagcattcatggcaccagccttcttgtggtg 2031
|| |||||| ||||||||||||||| || |||||||||||
Sbjct: 1506 cgagaatcagagcattcatggcacctgctttcttgtggtg 1467
Score = 63.9 bits (32), Expect = 3e-008
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 2333 aagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttc 2392
||||| ||||| |||||||| || |||||||| || ||||||||||| |||||||| ||
Sbjct: 1165 aagtagaactcaggagcccttggctcaatgttatgcttcttgcaaaatggaacccacttt 1106
Query: 2393 cttgcaaactctgcggtttc 2412
|| |||||||| || |||||
Sbjct: 1105 ctagcaaactcagcagtttc 1086
Score = 61.9 bits (31), Expect = 1e-007
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
|||||||||||| || || | |||||||| |||||||| ||||| |||||||| | |||
Sbjct: 2279 atgcatcttgaagcctgtcaggatatcttctgtaacagaaccataaatccatccaacctc 2220
Query: 1320 tttcccccattctgttttatcctcata 1346
||| |||||||| ||||| || |||||
Sbjct: 2219 tttaccccattcggttttttcttcata 2193
Score = 44.1 bits (22), Expect = 0.029
Identities = 73/90 (81%)
Strand = Plus / Minus
Query: 517 tgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccagattgcaaag 576
||||| ||||| ||||| || |||||||| ||||| |||| || ||||||| || ||
Sbjct: 3019 tgctttcccatcagacctttgaggaaaggatagagatggacaatgacccagaaagcgaaa 2960
Query: 577 aacagcttcccgaatagtggaccccatgat 606
|| |||||||| |||| ||||||||||||
Sbjct: 2959 aatagcttcccaaataaaggaccccatgat 2930
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1048 taaacaatggtgttgatgtatgccagtctctccag 1082
||||| |||||||||||||| || || ||||||||
Sbjct: 2491 taaacgatggtgttgatgtaagcaagcctctccag 2457
>gb|AF527387.1| Populus tremuloides xylem-specific cellulose synthase (CesA3) mRNA,
complete cds
Length = 3401
Score = 103 bits (52), Expect = 4e-020
Identities = 270/340 (79%), Gaps = 2/340 (0%)
Strand = Plus / Minus
Query: 1693 aggatcatagccatacaaggcctgcctattgaa-acagcatcctgttcccacataaacag 1751
|||||||||||||||||||| |||||| ||||| ||| ||||| || || ||||| || |
Sbjct: 1817 aggatcatagccatacaaggactgcctgttgaagaca-catccagtaccaacatatactg 1759
Query: 1752 gtccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggtttg 1811
| ||||||| ||||||||||| ||||| || ||||||||||| |||| ||| || || |
Sbjct: 1758 gcccttgaaccccatctagacctttcatgtttatatcaaagaacacaacgttgcgattag 1699
Query: 1812 catatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagttt 1871
|||||| |||||| || ||||||||||| || || |||||||| |||||||| |
Sbjct: 1698 catatctatcatggcgatcgataccatcaaacctctgcggaaactggacatagcagagct 1639
Query: 1872 tccttcctagtgctggatccatcatgaaacacatagcctctctaagagctttgctgctat 1931
|| | || ||| |||||||||| || ||||| || ||||| | ||| |||||| |||
Sbjct: 1638 tcttcccaagttggggatccatcaaaaagcacatggcttctcttacagccttgctgttat 1579
Query: 1932 tgaagtagtgatcacaatccacattaagaagataagcaccattcgtcaggacagctgata 1991
||| ||| || |||||||||| ||| | | | ||| |||| || || || ||||| |
Sbjct: 1578 tgatgtaatggtcacaatccaaattcaacataaaaggtgcattggtgagcactgctgaga 1519
Query: 1992 cgcgaatcaaagcattcatggcaccagccttcttgtggtg 2031
| ||||||| ||||||||||||||| || |||||||||||
Sbjct: 1518 ctcgaatcagagcattcatggcacctgctttcttgtggtg 1479
Score = 61.9 bits (31), Expect = 1e-007
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
|||||||||||| || || | |||||||| |||||||| ||||| |||||||| | |||
Sbjct: 2291 atgcatcttgaagcctgtcaggatatcttctgtaacagaaccataaatccatccaacctc 2232
Query: 1320 tttcccccattctgttttatcctcata 1346
||| |||||||| ||||| || |||||
Sbjct: 2231 tttaccccattccgttttttcttcata 2205
Score = 56.0 bits (28), Expect = 8e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 2333 aagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaaccca 2388
||||| ||||| |||||||| || |||||||| || ||||||||||| ||||||||
Sbjct: 1177 aagtagaactcaggagcccttggctcaatgttatgcttcttgcaaaatggaaccca 1122
Score = 40.1 bits (20), Expect = 0.46
Identities = 68/84 (80%)
Strand = Plus / Minus
Query: 523 cccatgagacccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagc 582
||||| ||||| || |||||||| ||||| |||| || ||||||| || || || |||
Sbjct: 3025 cccatcagacctttgaggaaaggatagagatggacaatgacccagaaagcgaaaaatagc 2966
Query: 583 ttcccgaatagtggaccccatgat 606
||||| |||| ||||||||||||
Sbjct: 2965 ttcccaaataaaggaccccatgat 2942
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1048 taaacaatggtgttgatgtatgccagtctctccag 1082
||||| |||||||||||||| || || ||||||||
Sbjct: 2503 taaacgatggtgttgatgtaagcaagcctctccag 2469
>gb|AY573571.1| Populus tremula x Populus tremuloides cellulose synthase (CesA1)
mRNA, complete cds
Length = 3472
Score = 103 bits (52), Expect = 4e-020
Identities = 270/340 (79%), Gaps = 2/340 (0%)
Strand = Plus / Minus
Query: 1693 aggatcatagccatacaaggcctgcctattgaa-acagcatcctgttcccacataaacag 1751
|||||||||||||||||||| |||||| ||||| ||| ||||| || || ||||| || |
Sbjct: 1889 aggatcatagccatacaaggactgcctgttgaagaca-catccagtaccaacatatactg 1831
Query: 1752 gtccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggtttg 1811
| ||||||| ||||||||||| ||||| || ||||||||||| |||| ||| || || |
Sbjct: 1830 gcccttgaaccccatctagacctttcatgtttatatcaaagaacacaacgttgcgattag 1771
Query: 1812 catatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagttt 1871
|||||| |||||| || ||||||||||| || || |||||||| |||||||| |
Sbjct: 1770 catatctatcatggcgatcgataccatcaaacctctgcggaaactggacatagcagagct 1711
Query: 1872 tccttcctagtgctggatccatcatgaaacacatagcctctctaagagctttgctgctat 1931
|| | || ||| |||||||||| || ||||| || ||||| | ||| |||||| |||
Sbjct: 1710 tcttcccaagttggggatccatcaaaaagcacatggcttctcttacagccttgctgttat 1651
Query: 1932 tgaagtagtgatcacaatccacattaagaagataagcaccattcgtcaggacagctgata 1991
||| ||| || |||||||||| ||| | | | ||| |||| || || || ||||| |
Sbjct: 1650 tgatgtaatggtcacaatccaaattcaacataaaaggtgcattggtgagcactgctgaga 1591
Query: 1992 cgcgaatcaaagcattcatggcaccagccttcttgtggtg 2031
| ||||||| ||||||||||||||| || |||||||||||
Sbjct: 1590 ctcgaatcagagcattcatggcacctgctttcttgtggtg 1551
Score = 61.9 bits (31), Expect = 1e-007
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
|||||||||||| || || | |||||||| |||||||| ||||| |||||||| | |||
Sbjct: 2363 atgcatcttgaagcctgtcaggatatcttctgtaacagaaccataaatccatccaacctc 2304
Query: 1320 tttcccccattctgttttatcctcata 1346
||| |||||||| ||||| || |||||
Sbjct: 2303 tttaccccattcggttttttcttcata 2277
Score = 56.0 bits (28), Expect = 8e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 2333 aagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaaccca 2388
||||| ||||| |||||||| || |||||||| || ||||||||||| ||||||||
Sbjct: 1249 aagtagaactcaggagcccttggctcaatgttatgcttcttgcaaaatggaaccca 1194
Score = 40.1 bits (20), Expect = 0.46
Identities = 68/84 (80%)
Strand = Plus / Minus
Query: 523 cccatgagacccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagc 582
||||| ||||| || |||||||| ||||| |||| || ||||||| || || || |||
Sbjct: 3097 cccatcagacctttgaggaaaggatagagatggacaatgacccagaaagcgaaaaatagc 3038
Query: 583 ttcccgaatagtggaccccatgat 606
||||| |||| ||||||||||||
Sbjct: 3037 ttcccaaataaaggaccccatgat 3014
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1048 taaacaatggtgttgatgtatgccagtctctccag 1082
||||| |||||||||||||| || || ||||||||
Sbjct: 2575 taaacgatggtgttgatgtaagcaagcctctccag 2541
Score = 36.2 bits (18), Expect = 7.2
Identities = 51/62 (82%)
Strand = Plus / Minus
Query: 841 acccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcgaagctcc 900
|||||||| |||||||| | |||| | |||| |||| || |||||||||||||| |||
Sbjct: 2782 acccaaaattgctcattacgccacaagtcctggatgctgactccactccatcgaagttcc 2723
Query: 901 aa 902
||
Sbjct: 2722 aa 2721
>gb|DT509821.1|DT509821 WS02424.BR_N10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02424_N10 5', mRNA sequence
Length = 723
Score = 101 bits (51), Expect = 1e-019
Identities = 180/223 (80%)
Strand = Plus / Minus
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|||||||||||| | || |||||||| || || ||||| | || || |||||||||||
Sbjct: 224 tttagccttccactatagccataccatatggggcagtgacgactgagaagaatttcaacg 165
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
||||| | ||||| || | |||||| || |||||||||||||||||||| ||||||||
Sbjct: 164 gaacccaaggcccaccgaagcacttgatttagacgatcagaaagattaatgggagcagat 105
Query: 1207 cccttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatc 1266
||||| ||| ||| || |||||||| ||||| ||| ||||||| | |||||||||
Sbjct: 104 cccttaaaggcaggacgcttcggcatgcaatagattgatctccaaccacgagcatgcatc 45
Query: 1267 ttgaaaccagttaaaatatcttcagtaacagagccatatatcc 1309
||||| || || | |||||||| |||||||| ||||||||||
Sbjct: 44 ttgaatcctgtaaggatatcttccgtaacagaaccatatatcc 2
Score = 87.7 bits (44), Expect = 2e-015
Identities = 179/224 (79%)
Strand = Plus / Minus
Query: 697 gtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcctttgatgtg 756
||||| ||||||| ||| ||||| | |||||||||||| ||||| | ||| ||||| |||
Sbjct: 614 gtccatttgaacatatatagctcggtaaaatcaccatcttcatcagatgcttttgaagtg 555
Query: 757 accgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaacacagcaaag 816
|| || || ||||| || || || || || ||||| | || |||||||| |||||||||
Sbjct: 554 actgtaaaatttgtatctattccagcaaggactttcagcaggccttggaagacagcaaag 495
Query: 817 agatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaatcctcaatg 876
||||| || || || ||||| ||||| ||||| ||||| |||||||| || || ||
Sbjct: 494 agatgagctgacacacctccaataacccagaactgttcattcctccaccattcatcgatc 435
Query: 877 ccaacaccactccatcgaagctccaaaataccagtggcgaagat 920
|||||||||||||||| | |||||||||||||| || |||||
Sbjct: 434 ccaacaccactccatctcatttccaaaataccagttgcaaagat 391
>gb|AY573572.1| Populus tremula x Populus tremuloides cellulose synthase (CesA2)
mRNA, complete cds
Length = 3991
Score = 101 bits (51), Expect = 1e-019
Identities = 78/87 (89%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
|||||||||||| |||||||| ||||| ||||||||||||||||| ||||| || |||||
Sbjct: 2863 atgcatcttgaagccagttaatatatcctcagtaacagagccataaatccacccaatctc 2804
Query: 1320 tttcccccattctgttttatcctcata 1346
||| |||||||| |||||||| |||||
Sbjct: 2803 ttttccccattcagttttatcttcata 2777
Score = 65.9 bits (33), Expect = 8e-009
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 832 ccaccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacacc 884
|||||||||||||| |||||||||||||||||||| || | |||||||||||
Sbjct: 3291 ccaccaatgacccagaactgctcatttctccaccagtcatggatgccaacacc 3239
Score = 60.0 bits (30), Expect = 5e-007
Identities = 84/102 (82%)
Strand = Plus / Minus
Query: 2648 ggataccactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaaata 2707
|||||||||||||| |||||||||| | |||||| | |||||||| | |||||||||
Sbjct: 1476 ggataccactttggaaactgatctaatatccaagaaacggcaaaccatatttcacaaatt 1417
Query: 2708 acagatacaagccacaacccataagcatcttccactggatga 2749
|| ||| ||||||||| ||||| ||||| | |||||||||
Sbjct: 1416 actgatgtaagccacaatccataggcatcgttgactggatga 1375
Score = 58.0 bits (29), Expect = 2e-006
Identities = 140/177 (79%)
Strand = Plus / Minus
Query: 1729 gcatcctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatc 1788
|||||| || || ||||| | ||| ||||| |||||||| | || |||||||| |||||
Sbjct: 2395 gcatccagtaccaacatatataggaccttgtatgccatccaatcctttcatattgatatc 2336
Query: 1789 aaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttg 1848
|||||| |||| || || |||| |||| |||||| || || ||||||||||||||
Sbjct: 2335 aaagaatacaacattacgatttgagtatctatcatgacgatcaatcccatcaaatctttg 2276
Query: 1849 tggaaactgaacatagcaagttttccttcctagtgctggatccatcatgaaacacat 1905
||||| |||||||| ||| ||||| |||| || ||| ||||||||||| |||||
Sbjct: 2275 cggaaattgaacataacaaattttctttccagatgttgggtccatcatgaagcacat 2219
Score = 50.1 bits (25), Expect = 5e-004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 2240 actttgaactcttcatactccctcttcat 2268
|||||||||||||||||||| ||||||||
Sbjct: 1884 actttgaactcttcatactctctcttcat 1856
Score = 50.1 bits (25), Expect = 5e-004
Identities = 151/193 (78%)
Strand = Plus / Minus
Query: 2370 tcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaag 2429
||||||| || || ||||| || |||||||| || | || ||||| | |||||||||||
Sbjct: 1754 tcttgcagaaagggacccactttcttgcaaattcagatgtctcagagatagcttcaaaag 1695
Query: 2430 tcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatcca 2489
| | ||| || | ||| ||||| || ||||| |||| ||||| || || || ||||| |
Sbjct: 1694 taagcatggcagcaccatcatctgagacatagcatgcaactttttcgactggataatcta 1635
Query: 2490 cagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatcca 2549
||||||| ||||||| ||| ||||| |||| || || |||||||| || | ||||| |
Sbjct: 1634 cagcaaggatggacaagactgtgtttgcagtgataagtggaggttctttcataggatcaa 1575
Query: 2550 ctgtactaacaaa 2562
|||| ||||||||
Sbjct: 1574 ctgtgctaacaaa 1562
Score = 48.1 bits (24), Expect = 0.002
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatc 2178
|||||||| ||||||||||| |||||||| ||||| |||||||||||
Sbjct: 1995 atcattccaggatgatctctgacattattccctggccatggagtgccatc 1946
Score = 40.1 bits (20), Expect = 0.46
Identities = 83/104 (79%)
Strand = Plus / Minus
Query: 1105 ccataccagataggacagtgtctgctaagtagaatttcaactgaaccaagagcccagcgt 1164
|||||||| || ||||||||||| || | || ||| ||||| || || || ||||| ||
Sbjct: 3018 ccataccatattggacagtgtctactcaataaaatctcaacagatcccagtgcccatcgg 2959
Query: 1165 aacacttggttgagacgatcagaaagattaattggagcagaacc 1208
| ||| |||| |||||||| ||||| || |||||||| |||||
Sbjct: 2958 agcacctggtgtagacgatctgaaaggtttattggagctgaacc 2915
Score = 38.2 bits (19), Expect = 1.8
Identities = 70/87 (80%)
Strand = Plus / Minus
Query: 1999 caaagcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgaga 2058
||||| |||||| || ||||| ||||||||||| | || || || ||||| ||||||||
Sbjct: 2125 caaagaattcatagccccagctttcttgtggtgatcaaatcccggtctcttctcacgaga 2066
Query: 2059 aacataaacaagccgtggcaactcatt 2085
|| ||||| || || ||||| |||||
Sbjct: 2065 cacgtaaactagacgaggcaattcatt 2039
>gb|CV130875.1|CV130875 X9SP07b02 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 882
Score = 97.6 bits (49), Expect = 2e-018
Identities = 127/153 (83%)
Strand = Plus / Minus
Query: 1179 acgatcagaaagattaattggagcagaacccttgaagcaaggccgaagtggcatgcagta 1238
||||||||||||||| || |||||||| ||||| | || ||| | |||||||| ||
Sbjct: 448 acgatcagaaagattgataggagcagaccccttaagtgctgggcgaggaggcatgcaata 389
Query: 1239 gatggatatccaacctcttgcatgcatcttgaaaccagttaaaatatcttcagtaacaga 1298
||| ||||||||||| | |||||||||||||| || || ||||||||||| ||||| ||
Sbjct: 388 gattgatatccaaccacgagcatgcatcttgaacccggtcaaaatatcttctgtaacgga 329
Query: 1299 gccatatatccatccgatctctttcccccattc 1331
||||| |||||||| |||||||| ||||||||
Sbjct: 328 accatagatccatccaatctctttgccccattc 296
Score = 71.9 bits (36), Expect = 1e-010
Identities = 137/173 (79%)
Strand = Plus / Minus
Query: 562 acccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttg 621
||||| || |||||||| ||||| || || || ||||||||||| ||||| ||||||||
Sbjct: 722 acccaaatagcaaagaagagcttgccaaagagaggaccccatgactggtatccactgttt 663
Query: 622 atagcatacgacactccagccactataccaaccaggttaatcacaagcacagtggtnnnn 681
|| ||||| ||||| |||||||| ||||| |||| ||| | | || || |||||
Sbjct: 662 atggcataggacacgccagccacaatacccaccatgtttagtaaaatgactgtggtcgga 603
Query: 682 nnnatcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatc 734
|| ||||||| |||||| ||||||||||| ||||| |||||||| |||||
Sbjct: 602 gggatgagaagagatgtccatttgaacacatagagctctgcaaaatccccatc 550
Score = 71.9 bits (36), Expect = 1e-010
Identities = 99/120 (82%)
Strand = Plus / Minus
Query: 1447 tgcaataaaaattggagactggccaaagcgtttctccaagctcttctgagacataagcag 1506
||||||||||| ||| ||||| ||||| || || || || |||||||| |||||||||||
Sbjct: 193 tgcaataaaaactggtgactgaccaaaacgcttttctaaactcttctgtgacataagcag 134
Query: 1507 tgacctttcatcctcgtaaccttcaaatccctcttctatatcttccatgttgaagatggg 1566
|||||| ||||| || || ||||||| ||||| || || || ||||| ||||| |||||
Sbjct: 133 tgacctctcatcatcatatccttcaacaccctcctcaatgtcctccatattgaaaatggg 74
>gb|CN520281.1|CN520281 GQ0105.B3_A14 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0105_A14 5', mRNA sequence
Length = 783
Score = 95.6 bits (48), Expect = 9e-018
Identities = 269/340 (79%), Gaps = 2/340 (0%)
Strand = Plus / Minus
Query: 1693 aggatcatagccatacaaggcctgcctattgaa-acagcatcctgttcccacataaacag 1751
|||||||||||||||||||| |||||| ||||| ||| ||||| || || ||||| || |
Sbjct: 636 aggatcatagccatacaaggactgcctgttgaagaca-catccagtaccaacatatactg 578
Query: 1752 gtccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggtttg 1811
| ||||||| ||||||||||| ||||| || ||||||||||| |||| || || || |
Sbjct: 577 gcccttgaaccccatctagacctttcatgtttatatcaaagaacacaacattgcgattag 518
Query: 1812 catatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagttt 1871
|||||| |||||| || ||||||||||| || || |||||||| |||||||| |
Sbjct: 517 catatctatcatggcgatcaataccatcaaacctctgcggaaactggacatagcagagct 458
Query: 1872 tccttcctagtgctggatccatcatgaaacacatagcctctctaagagctttgctgctat 1931
|| | || ||| |||||||||| || ||||| || ||||| | ||| |||||| |||
Sbjct: 457 tcttcccaagttggggatccatcaaaaagcacatggcttctcttacagccttgctgttat 398
Query: 1932 tgaagtagtgatcacaatccacattaagaagataagcaccattcgtcaggacagctgata 1991
||| ||| || |||||||||| ||| | | | ||| |||| || || || ||||| |
Sbjct: 397 tgatgtaatggtcacaatccaaattcaacataaaaggtgcattggtgagcactgctgaga 338
Query: 1992 cgcgaatcaaagcattcatggcaccagccttcttgtggtg 2031
| ||||||| ||||||||||||||| || |||||||||||
Sbjct: 337 ctcgaatcagagcattcatggcacctgctttcttgtggtg 298
>gb|CN550567.1|CN550567 GQ0241.B3_I15 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0241_I15 5', mRNA sequence
Length = 777
Score = 89.7 bits (45), Expect = 6e-016
Identities = 120/145 (82%)
Strand = Plus / Minus
Query: 733 tcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttt 792
|||||||| |||||||| |||||||| ||||||||||||||||| || |||| |||||
Sbjct: 293 tcatcatctgttgccttggatgtgacagtgaagtttgtgtcgataccagctaaaactttc 234
Query: 793 aagagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgc 852
| |||||||||| ||||||||||| || || || ||||| || ||||| || |||
Sbjct: 233 agaagaccttggacaacagcaaagaggtgagctgatacaccacctataacccagaattgc 174
Query: 853 tcatttctccaccaatcctcaatgc 877
|| ||||||||||| ||||||||||
Sbjct: 173 tcgtttctccaccattcctcaatgc 149
>gb|AJ774508.1|AJ774508 AJ774508 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300021B12F1, mRNA sequence
Length = 655
Score = 89.7 bits (45), Expect = 6e-016
Identities = 120/145 (82%)
Strand = Plus / Minus
Query: 733 tcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttt 792
||||| || |||||||| |||||||| ||||||||||||||||| ||||||| |||||
Sbjct: 281 tcatcgtctgttgccttggatgtgacagtgaagtttgtgtcgatacctgctaaaactttc 222
Query: 793 aagagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgc 852
| |||||||||| ||||||||||| || || || ||||| || ||||| || |||
Sbjct: 221 agaagaccttggacaacagcaaagaggtgagctgatacaccacctataacccagaattgc 162
Query: 853 tcatttctccaccaatcctcaatgc 877
|| ||||||||||| ||||||||||
Sbjct: 161 tcgtttctccaccattcctcaatgc 137
Score = 87.7 bits (44), Expect = 2e-015
Identities = 116/140 (82%)
Strand = Plus / Minus
Query: 502 gtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatc 561
|||||||| | ||| ||| ||||||| ||||| || ||||| |||||||| |||| |||
Sbjct: 509 gtcggtgtcctgttttgcctccccattagacctttgaggaatgggtagagatggacaatc 450
Query: 562 acccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttg 621
||||||| |||||||| |||||||||||||| || |||||||| ||||| ||| ||||
Sbjct: 449 acccagaaggcaaagaagagcttcccgaatagaggtccccatgactggtacccattgttt 390
Query: 622 atagcatacgacactccagc 641
|| |||| || ||||||||
Sbjct: 389 atggcatctgagactccagc 370
>gb|DT487943.1|DT487943 WS02535.B21_B11 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02535_B11 3', mRNA sequence
Length = 720
Score = 89.7 bits (45), Expect = 6e-016
Identities = 120/145 (82%)
Strand = Plus / Minus
Query: 733 tcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttt 792
|||||||| |||||||| |||||||| ||||||||||||||||| || |||| |||||
Sbjct: 452 tcatcatctgttgccttggatgtgacagtgaagtttgtgtcgataccagctaaaactttc 393
Query: 793 aagagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgc 852
| |||||||||| ||||||||||| || || || ||||| || ||||| || |||
Sbjct: 392 agaagaccttggacaacagcaaagaggtgagctgatacaccacctataacccagaattgc 333
Query: 853 tcatttctccaccaatcctcaatgc 877
|| ||||||||||| ||||||||||
Sbjct: 332 tcgtttctccaccattcctcaatgc 308
>gb|AY162180.1| Populus tremuloides cellulose synthase (CesA7) mRNA, complete cds
Length = 3809
Score = 89.7 bits (45), Expect = 6e-016
Identities = 186/233 (79%)
Strand = Plus / Minus
Query: 1835 ccatcaaatctttgtggaaactgaacatagcaagttttccttcctagtgctggatccatc 1894
|||||||||| ||| |||||||| ||||| ||| ||| | ||| || ||||||||||
Sbjct: 2008 ccatcaaatcgttgaggaaactgcacataacaaacttttttccctgatgttggatccatc 1949
Query: 1895 atgaaacacatagcctctctaagagctttgctgctattgaagtagtgatcacaatccaca 1954
||||||||||| || |||||||| ||| |||| | || | || || |||||||| |||
Sbjct: 1948 atgaaacacatggcttctctaagtgctctgctattgttaatataatggtcacaatcaaca 1889
Query: 1955 ttaagaagataagcaccattcgtcaggacagctgatacgcgaatcaaagcattcatggca 2014
|| |||||||||| |||| | ||| || || || || || |||| | |||||||||
Sbjct: 1888 ttcagaagataaggggcatttgacagaactgcagagacccgcatcagtgaattcatggcc 1829
Query: 2015 ccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacataaac 2067
||||||||||| ||||| | ||| ||||| ||||| |||||||||||||||||
Sbjct: 1828 ccagccttcttatggtgttcgaaccctggtctcttctcacgagaaacataaac 1776
Score = 67.9 bits (34), Expect = 2e-009
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
||||||||||| || || || ||||| || |||||||||||||||||||| || | ||
Sbjct: 2578 tgcatcttgaatcctgtcaagatatcctctgtaacagagccatatatccagccaacttcc 2519
Query: 1321 ttcccccattctgttttatcctcata 1346
|| ||||||||||||||||| |||||
Sbjct: 2518 tttccccattctgttttatcttcata 2493
Score = 48.1 bits (24), Expect = 0.002
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
||||| ||||||||||||||||| ||||| | ||||| || ||| |||| || | ||||
Sbjct: 3298 aggaaggggtagaggtggaggatgacccatagggcaaaaaatagcctcccaaacaatgga 3239
Query: 598 ccccatga 605
||||||||
Sbjct: 3238 ccccatga 3231
Score = 46.1 bits (23), Expect = 0.007
Identities = 152/195 (77%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
|||||||||||| |||||||| ||||| ||||| || | || || || |||||||||||
Sbjct: 1475 tttcttgcaaaatggaacccacttcctagcaaattcagacgtctcggagagagcttcaaa 1416
Query: 2428 agtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
|| | ||| || | ||| || || || ||||| |||| ||||| || ||||| |||||
Sbjct: 1415 tgtaagcatggcggcaccatcgtctgacacatagcatgcaactttatccacaggataatc 1356
Query: 2488 cacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatc 2547
|| || ||||| || || |||||||| |||| || || |||||||| || | |||||
Sbjct: 1355 aaccgcgagaatagagagaacagtgttcgcagtgatcagcggaggttctttcataggatc 1296
Query: 2548 cactgtactaacaaa 2562
|||||||| |||||
Sbjct: 1295 aactgtacttacaaa 1281
Score = 42.1 bits (21), Expect = 0.12
Identities = 90/113 (79%)
Strand = Plus / Minus
Query: 1102 taaccataccagataggacagtgtctgctaagtagaatttcaactgaaccaagagcccag 1161
||||||||||| || ||||||||||| || | | ||| ||||| ||||| || |||||
Sbjct: 2737 taaccataccaaattggacagtgtctactgaagaaaatctcaacagaaccgagggcccac 2678
Query: 1162 cgtaacacttggttgagacgatcagaaagattaattggagcagaacccttgaa 1214
|| | || |||| |||||||| || || ||||||||||| || ||||||||
Sbjct: 2677 cgaagaacctggtgtagacgatctgacaggttaattggagctgaccccttgaa 2625
Score = 40.1 bits (20), Expect = 0.46
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 835 ccaatgacccaaaactgctcatttctccacca 866
||||| |||||||| || ||||||||||||||
Sbjct: 3004 ccaatcacccaaaattgttcatttctccacca 2973
>gb|CF232388.1|CF232388 PtaJXO0009H2H0216 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 629
Score = 87.7 bits (44), Expect = 2e-015
Identities = 116/140 (82%)
Strand = Plus / Minus
Query: 502 gtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatc 561
|||||||| | ||| ||| ||||||| ||||| || ||||| |||||||| |||| |||
Sbjct: 535 gtcggtgtcctgttttgcctccccattagacctttgaggaatgggtagagatggacaatc 476
Query: 562 acccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttg 621
||||||| |||||||| |||||||||||||| || |||||||| ||||| ||| ||||
Sbjct: 475 acccagaaggcaaagaagagcttcccgaatagaggtccccatgactggtacccattgttt 416
Query: 622 atagcatacgacactccagc 641
|| |||| || ||||||||
Sbjct: 415 atggcatctgagactccagc 396
Score = 81.8 bits (41), Expect = 1e-013
Identities = 119/145 (82%)
Strand = Plus / Minus
Query: 733 tcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttt 792
||||| || |||||||| || ||||| ||||||||||||||||| ||||||| |||||
Sbjct: 307 tcatcgtctgttgccttggaagtgacagtgaagtttgtgtcgatacctgctaaaactttc 248
Query: 793 aagagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgc 852
| |||||||||| ||||||||||| || || || ||||| || ||||| || |||
Sbjct: 247 agaagaccttggacaacagcaaagaggtgagctgatacaccacctataacccagaattgc 188
Query: 853 tcatttctccaccaatcctcaatgc 877
|| ||||||||||| ||||||||||
Sbjct: 187 tcgtttctccaccattcctcaatgc 163
>gb|CF235321.1|CF235321 PtaJXT0021D9D0907 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 486
Score = 87.7 bits (44), Expect = 2e-015
Identities = 116/140 (82%)
Strand = Plus / Minus
Query: 502 gtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatc 561
|||||||| | ||| ||| ||||||| ||||| || ||||| |||||||| |||| |||
Sbjct: 152 gtcggtgtcctgttttgcctccccattagacctttgaggaatgggtagagatggacaatc 93
Query: 562 acccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttg 621
||||||| |||||||| |||||||||||||| || |||||||| ||||| ||| ||||
Sbjct: 92 acccagaaggcaaagaagagcttcccgaatagaggtccccatgactggtacccattgttt 33
Query: 622 atagcatacgacactccagc 641
|| |||| || ||||||||
Sbjct: 32 atggcatctgagactccagc 13
>gb|AJ775294.1|AJ775294 AJ775294 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300030F05F1, mRNA sequence
Length = 385
Score = 87.7 bits (44), Expect = 2e-015
Identities = 116/140 (82%)
Strand = Plus / Minus
Query: 502 gtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatc 561
|||||||| | ||| ||| ||||||| ||||| || ||||| |||||||| |||| |||
Sbjct: 240 gtcggtgtcctgttttgcctccccattagacctttgaggaatgggtagagatggacaatc 181
Query: 562 acccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttg 621
||||||| |||||||| |||||||||||||| || |||||||| ||||| ||| ||||
Sbjct: 180 acccagaaggcaaagaagagcttcccgaatagaggtccccatgactggtacccattgttt 121
Query: 622 atagcatacgacactccagc 641
|| |||| || ||||||||
Sbjct: 120 atggcatctgagactccagc 101
>gb|AJ775532.1|AJ775532 AJ775532 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300033F04F1, mRNA sequence
Length = 589
Score = 87.7 bits (44), Expect = 2e-015
Identities = 116/140 (82%)
Strand = Plus / Minus
Query: 502 gtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatc 561
|||||||| | ||| ||| ||||||| ||||| || ||||| |||||||| |||| |||
Sbjct: 364 gtcggtgtcctgttttgcctccccattagacctttgaggaatgggtagagatggacaatc 305
Query: 562 acccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttg 621
||||||| |||||||| |||||||||||||| || |||||||| ||||| ||| ||||
Sbjct: 304 acccagaaggcaaagaagagcttcccgaatagaggtccccatgactggtacccattgttt 245
Query: 622 atagcatacgacactccagc 641
|| |||| || ||||||||
Sbjct: 244 atggcatctgagactccagc 225
Score = 75.8 bits (38), Expect = 8e-012
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 733 tcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttt 792
||||| || |||||||| |||||||| ||||||||||||||||| ||||||| |||||
Sbjct: 136 tcatcgtctgttgccttggatgtgacagtgaagtttgtgtcgatacctgctaaaactttc 77
Query: 793 aagagaccttggaacacagcaaagag 818
| |||||||||| |||||||||||
Sbjct: 76 agaagaccttggacaacagcaaagag 51
>gb|CA927446.1|CA927446 MTU6CR.P9.B04 Aspen root cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 648
Score = 85.7 bits (43), Expect = 9e-015
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||||||||| ||||| |||||||| || | ||||||||| ||||||||||||||||||
Sbjct: 347 agaatttcaacagaacccagagcccatcgaagcacttggttcagacgatcagaaagatta 406
Query: 1195 attggagcaga 1205
|| ||||||||
Sbjct: 407 ataggagcaga 417
Score = 71.9 bits (36), Expect = 1e-010
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| |||||||| ||||| || || ||||| |||||||||||||| |||||
Sbjct: 11 ccttggaaaacagcaaaaagatgggctgaaacaccaccgatgacccaaaactgttcattc 70
Query: 859 ctccaccaatcctcaatgccaacaccactcca 890
|||||||| || ||||| ||||||||||||||
Sbjct: 71 ctccaccactcatcaatcccaacaccactcca 102
Score = 67.9 bits (34), Expect = 2e-009
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1258 gcatgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatc 1317
||||||||||| |||||||| | ||||||||| |||||||| ||||| |||||||| |||
Sbjct: 470 gcatgcatcttaaaaccagtaagaatatcttctgtaacagaaccatagatccatccaatc 529
Query: 1318 tc 1319
||
Sbjct: 530 tc 531
>gb|CK100621.1|CK100621 C057P32.5pR Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA clone C057P32 5', mRNA sequence
Length = 468
Score = 85.7 bits (43), Expect = 9e-015
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||||||||| ||||| |||||||| || | ||||||||| ||||||||||||||||||
Sbjct: 128 agaatttcaacagaacccagagcccatcgaagcacttggttcagacgatcagaaagatta 69
Query: 1195 attggagcaga 1205
|| ||||||||
Sbjct: 68 ataggagcaga 58
Score = 71.9 bits (36), Expect = 1e-010
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| |||||||| ||||| || || ||||| |||||||||||||| |||||
Sbjct: 464 ccttggaaaacagcaaaaagatgggctgaaacaccaccgatgacccaaaactgttcattc 405
Query: 859 ctccaccaatcctcaatgccaacaccactcca 890
|||||||| || ||||| ||||||||||||||
Sbjct: 404 ctccaccactcatcaatcccaacaccactcca 373
>gb|CN549808.1|CN549808 GQ0241.B3_H11 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0241_H11 5', mRNA sequence
Length = 840
Score = 85.7 bits (43), Expect = 9e-015
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||||||||| ||||| |||||||| || | ||||||||| ||||||||||||||||||
Sbjct: 677 agaatttcaacagaacccagagcccatcgaagcacttggttcagacgatcagaaagatta 618
Query: 1195 attggagcaga 1205
|| ||||||||
Sbjct: 617 ataggagcaga 607
Score = 73.8 bits (37), Expect = 3e-011
Identities = 76/89 (85%)
Strand = Plus / Minus
Query: 1258 gcatgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatc 1317
||||||||||| |||||||| | ||||||||| |||||||| ||||| |||||||| |||
Sbjct: 554 gcatgcatcttaaaaccagtaagaatatcttctgtaacagaaccatagatccatccaatc 495
Query: 1318 tctttcccccattctgttttatcctcata 1346
|| ||||| |||||||| ||||||||
Sbjct: 494 tcagatccccaatctgttttgtcctcata 466
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 1730 catcctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatca 1789
||||| || |||||||| |||||||||||||| ||||| |||||| ||| || ||||||
Sbjct: 83 catccagtacccacatagacaggtccttgaataccatccagacccctcaagtttatatca 24
Query: 1790 aagaa 1794
|||||
Sbjct: 23 aagaa 19
>gb|DT493580.1|DT493580 WS0111.BR_M17 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0111_M17
5', mRNA sequence
Length = 514
Score = 83.8 bits (42), Expect = 3e-014
Identities = 75/86 (87%)
Strand = Plus / Minus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
|||||||||||||| |||| ||||||||||| |||||||| ||||| || || ||||||
Sbjct: 90 aggaaagggtagagatggacgatcacccagaaggcaaagaaaagcttgccaaagagtgga 31
Query: 598 ccccatgattggtagccactgttgat 623
||||| || ||||| |||||||||||
Sbjct: 30 ccccacgactggtaaccactgttgat 5
>gb|CV227790.1|CV227790 WS0168.B21_D13 PT-DX-A-7 Populus trichocarpa cDNA clone WS0168_D13
3', mRNA sequence
Length = 817
Score = 81.8 bits (41), Expect = 1e-013
Identities = 157/198 (79%)
Strand = Plus / Plus
Query: 562 acccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttg 621
||||| || |||||||||||||| ||||| || ||||||||||| ||||| || |||||
Sbjct: 620 acccaaatagcaaagaacagcttgccgaagagcggaccccatgactggtacccgctgttt 679
Query: 622 atagcatacgacactccagccactataccaaccaggttaatcacaagcacagtggtnnnn 681
|| || | ||||| |||||||| ||||| | || ||| | |||| ||||||||
Sbjct: 680 atggcgaaggacacaccagccacaatacccatcatgttcagtacaatgacagtggttgga 739
Query: 682 nnnatcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcg 741
|| ||||||| |||||| ||||||||||| ||||| |||||||| ||||| |||||
Sbjct: 740 gggatgagaagagatgtccatttgaacacataaagctctgcaaaatccccatcctcatca 799
Query: 742 gttgcctttgatgtgacc 759
| ||| ||||| ||||||
Sbjct: 800 gatgcttttgaagtgacc 817
Score = 44.1 bits (22), Expect = 0.029
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 431 tgaaggggtcgatcttcacccacagcagcgagaatatggaagcaag 476
||||||||||||| |||||| |||| |||||||||||||||||
Sbjct: 489 tgaaggggtcgatgcgcacccatagcaaggagaatatggaagcaag 534
>gb|CV242542.1|CV242542 WS02515.B21_F16 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02515_F16 3', mRNA sequence
Length = 861
Score = 81.8 bits (41), Expect = 1e-013
Identities = 181/230 (78%)
Strand = Plus / Plus
Query: 562 acccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttg 621
||||| || |||||||||||||| || || || ||||||||||| ||||| || |||||
Sbjct: 621 acccaaatagcaaagaacagcttgccaaagagcggaccccatgactggtacccgctgttt 680
Query: 622 atagcatacgacactccagccactataccaaccaggttaatcacaagcacagtggtnnnn 681
|| || | ||||| |||||||| ||||| | || ||| | | || ||||||||
Sbjct: 681 atggcgaaggacacaccagccacaatacccatcatgttcagtagaatgacagtggttgga 740
Query: 682 nnnatcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcg 741
|| ||||||| |||||| ||||||||||| ||||| |||||||| ||||| |||||
Sbjct: 741 gggatgagaagagatgtccatttgaacacataaagctctgcaaaatccccatcctcatca 800
Query: 742 gttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttt 791
| ||| ||||| ||||| |||||||| || || || ||||| ||||||||
Sbjct: 801 gatgcttttgaagtgacagtgaagttggtatcaatacctgcaagcacttt 850
Score = 44.1 bits (22), Expect = 0.029
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 431 tgaaggggtcgatcttcacccacagcagcgagaatatggaagcaag 476
||||||||||||| |||||| |||| |||||||||||||||||
Sbjct: 490 tgaaggggtcgatgcgcacccatagcaaggagaatatggaagcaag 535
>gb|AF417485.1| Populus tremuloides cellulose synthase (CesA2) gene, partial cds
Length = 1335
Score = 81.8 bits (41), Expect = 1e-013
Identities = 71/81 (87%)
Strand = Plus / Minus
Query: 1786 atcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatct 1845
||||||||| ||| |||||||||||||||||||||||| | ||| || |||||||| ||
Sbjct: 81 atcaaagaatacagtgttccggtttgcatatcgatcattcctgtcaatgccatcaaacct 22
Query: 1846 ttgtggaaactgaacatagca 1866
||||||||||| ||||||||
Sbjct: 21 ctgtggaaactggacatagca 1
Score = 42.1 bits (21), Expect = 0.12
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 1750 aggtccttgaatgccatctagacccttcatatt 1782
|||||||||||||||||| | ||| ||||||||
Sbjct: 202 aggtccttgaatgccatccaaacctttcatatt 170
>gb|CF229283.1|CF229283 PtaXM0023E4E0410 Poplar cDNA library from mature xylem Populus alba x
Populus tremula cDNA 5', mRNA sequence
Length = 642
Score = 79.8 bits (40), Expect = 5e-013
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||||||||| ||||| |||||||| || | ||||||||| ||||||||||||||||||
Sbjct: 69 agaatttcaacagaacccagagcccatcgaagcacttggttcagacgatcagaaagatta 10
Query: 1195 attggagc 1202
|| |||||
Sbjct: 9 ataggagc 2
Score = 73.8 bits (37), Expect = 3e-011
Identities = 159/200 (79%)
Strand = Plus / Minus
Query: 691 agagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgccttt 750
||||||||||| ||||||| || | |||||| |||||| || || || | ||||||
Sbjct: 513 agagttgtccatttgaacaagtataattcagcagaatcacngtcctcgtctgatgccttg 454
Query: 751 gatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaacaca 810
|| || || |||||||| |||||||| || || || ||||| | | |||||||| |||
Sbjct: 453 gacgtaacagtgaagttggtgtcgatgccagcaagtactttgagcaagccttggaaaaca 394
Query: 811 gcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaatcc 870
||||| ||||| || || ||||| |||||||||||||| ||||| |||||||| ||
Sbjct: 393 gcaaaaagatgggctgaaacaccaccgatgacccaaaactgttcattcctccaccactca 334
Query: 871 tcaatgccaacaccactcca 890
||||| ||||||||||||||
Sbjct: 333 tcaatcccaacaccactcca 314
>gb|DT473511.1|DT473511 WS01229.BR_N17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_N17 5', mRNA sequence
Length = 912
Score = 79.8 bits (40), Expect = 5e-013
Identities = 109/132 (82%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaa 2427
||||||||| || ||||||||||| || ||||| || | |||||||||| ||||||||
Sbjct: 832 tttcttgcagaaaggaacccattttctagcaaattcagacgtttcagatatggcttcaaa 773
Query: 2428 agtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
||||||||||| | || ||||| |||||||| || || |||||||| || ||||||||
Sbjct: 772 tgtcaacatagcagctccatcatctgaaacatagcaagagactttgtcgactgggtaatc 713
Query: 2488 cacagcaagaat 2499
|| ||||||||
Sbjct: 712 tactgcaagaat 701
>gb|BI071413.1|BI071413 C057P32U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 357
Score = 77.8 bits (39), Expect = 2e-012
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||||||||| ||||| |||||||| || | | ||||||| ||||||||||||||||||
Sbjct: 122 agaatttcaacagaacccagagcccatcgaagcncttggttcagacgatcagaaagatta 63
Query: 1195 attggagcag 1204
|| |||||||
Sbjct: 62 ataggagcag 53
>gb|CF233490.1|CF233490 PtaJXO0024C12C1206 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 584
Score = 77.8 bits (39), Expect = 2e-012
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 1697 tcatagccatacaaggcctgcctattgaaacagcatcctgttcccacataaacaggtcct 1756
|||||||||||||| || ||||| |||||| ||||||||| |||||||| || || ||
Sbjct: 85 tcatagccatacaaagcttgccttttgaaaacgcatcctgtgcccacatacactggaccc 26
Query: 1757 tgaatgccatctagacccttcat 1779
||||| |||||||||||||||||
Sbjct: 25 tgaattccatctagacccttcat 3
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacg 1181
|||||||||||||| || | |||||| ||||||||
Sbjct: 564 gaaccaagagcccatcgcagcacttgattgagacg 530
>gb|BP927588.1|BP927588 BP927588 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-073_N03.f 5', mRNA sequence
Length = 403
Score = 75.8 bits (38), Expect = 8e-012
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
||||||||||| || || || |||||||| |||||||||||||||||||| || | ||
Sbjct: 324 tgcatcttgaatcctgtcaagatatcttctgtaacagagccatatatccagccaacttcc 265
Query: 1321 ttcccccattctgttttatcctcata 1346
|| ||||||||||||||||| |||||
Sbjct: 264 tttccccattctgttttatcttcata 239
>gb|BU817734.1|BU817734 UA20CPD09 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 385
Score = 73.8 bits (37), Expect = 3e-011
Identities = 162/206 (78%)
Strand = Plus / Minus
Query: 562 acccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttg 621
||||| || ||| |||||||||| || || |||||||||||||| ||||| || |||||
Sbjct: 210 acccaaatagcatagaacagcttgccaaagagtggaccccatgactggtacccgctgttt 151
Query: 622 atagcatacgacactccagccactataccaaccaggttaatcacaagcacagtggtnnnn 681
|| ||| | ||||| || ||||| ||||| | || ||| | | || ||||||||
Sbjct: 150 atggcaaaggacacaccggccacgatacccatcatgttcagtagaatgacagtggttgga 91
Query: 682 nnnatcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcg 741
|| ||||||| |||||| ||||||||||| ||||| |||||||| ||||| |||||
Sbjct: 90 gggatgagaagagatgtccatttgaacacataaagctctgcaaaatccccatcctcatca 31
Query: 742 gttgcctttgatgtgaccgtgaagtt 767
| ||| ||||| ||||| ||||||||
Sbjct: 30 gatgcttttgaagtgacagtgaagtt 5
>gb|AJ778410.1|AJ778410 AJ778410 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000500004B05F1, mRNA sequence
Length = 634
Score = 73.8 bits (37), Expect = 3e-011
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 521 tccccatgagacccttcaggaaagggtagaggtggaggatcacccagattgcaaagaaca 580
||||||| ||||| || ||||| |||||||| |||| |||||||||| |||||||| |
Sbjct: 341 tccccattagacctttgaggaatgggtagagatggacaatcacccagaaggcaaagaaga 282
Query: 581 gcttcccgaatagtggaccccatga 605
||||||||||||| || ||||||||
Sbjct: 281 gcttcccgaatagaggtccccatga 257
Score = 71.9 bits (36), Expect = 1e-010
Identities = 75/88 (85%)
Strand = Plus / Minus
Query: 731 catcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactt 790
||||||| || |||||||| |||||||| ||||||||||||||||| || |||| ||||
Sbjct: 133 catcatcgtctgttgccttggatgtgacagtgaagtttgtgtcgataccagctaaaactt 74
Query: 791 ttaagagaccttggaacacagcaaagag 818
| | |||||||||| |||||||||||
Sbjct: 73 tcagaagaccttggacaacagcaaagag 46
>gb|CK318831.1|CK318831 X9P03h01 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 727
Score = 71.9 bits (36), Expect = 1e-010
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 2333 aagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttc 2392
||||| ||||| |||||||| || |||||||| || ||||||||||| ||||||||| ||
Sbjct: 496 aagtagaactcaggagcccttggctcaatgttatgcttcttgcaaaatggaacccatctc 437
Query: 2393 cttgcaaactctgcggtttc 2412
|| |||||||| || |||||
Sbjct: 436 ctagcaaactcagcagtttc 417
>gb|AJ777820.1|AJ777820 AJ777820 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400035F01F1, mRNA sequence
Length = 658
Score = 71.9 bits (36), Expect = 1e-010
Identities = 159/200 (79%)
Strand = Plus / Minus
Query: 691 agagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgccttt 750
||||||||||| ||||||| || | |||||||||||||| || || || | ||||||
Sbjct: 504 agagttgtccatttgaacaagtataattcagcaaaatcaccgtcctcgtctgatgccttg 445
Query: 751 gatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaacaca 810
|| || || |||||||| ||||| || || || || ||||| | | |||||||| |||
Sbjct: 444 gacgtaacagtgaagttggtgtcaatgccagcaagtactttgagcaagccttggaaaaca 385
Query: 811 gcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaatcc 870
||||| ||||| || || ||||| || ||||||||||| ||||| |||||||| ||
Sbjct: 384 gcaaaaagatgggctgaaacaccaccgataacccaaaactgttcattcctccaccactca 325
Query: 871 tcaatgccaacaccactcca 890
||||| ||||||||||||||
Sbjct: 324 tcaatcccaacaccactcca 305
Score = 71.9 bits (36), Expect = 1e-010
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||||||||| ||||| |||||||| || | ||||||||| ||||||||||||||||||
Sbjct: 60 agaatttcaacagaacccagagcccatcgaagcacttggttcagacgatcagaaagatta 1
Score = 69.9 bits (35), Expect = 5e-010
Identities = 77/91 (84%)
Strand = Plus / Minus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
|||||||| || || |||| ||||||||||| ||| ||||| ||||| || || ||||||
Sbjct: 658 aggaaaggataaagatggatgatcacccagaatgcgaagaaaagcttgccaaagagtgga 599
Query: 598 ccccatgattggtagccactgttgatagcat 628
|||||||| || || ||||||||||| ||||
Sbjct: 598 ccccatgactgataaccactgttgattgcat 568
>gb|CV252351.1|CV252351 PX0011.B21_G15 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0011_G15 3', mRNA sequence
Length = 445
Score = 71.9 bits (36), Expect = 1e-010
Identities = 114/140 (81%)
Strand = Plus / Plus
Query: 502 gtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatc 561
|||||||| | ||| ||| ||||||| | ||| || ||||| ||||| || |||| |||
Sbjct: 282 gtcggtgtcctgttttgcctccccatcaaacctttgaggaacgggtaaagatggacaatc 341
Query: 562 acccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttg 621
||||||| |||||||| |||||||||||||| || |||||||| ||||| ||| ||||
Sbjct: 342 acccagaaggcaaagaagagcttcccgaatagaggtccccatgactggtacccattgttt 401
Query: 622 atagcatacgacactccagc 641
|| |||| || ||||||||
Sbjct: 402 atggcatctgagactccagc 421
>gb|BP923622.1|BP923622 BP923622 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-022_F10.f 5', mRNA sequence
Length = 311
Score = 71.9 bits (36), Expect = 1e-010
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 1263 catcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctcttt 1322
||||||||| || || || |||||||| |||||||||||||||||||| || | || ||
Sbjct: 311 catcttgaatcctgtcaagatatcttctgtaacagagccatatatccagccaacttcctt 252
Query: 1323 cccccattctgttttatcctcata 1346
||||||||||||||||| |||||
Sbjct: 251 tccccattctgttttatcttcata 228
>gb|CA934196.1|CA934196 MTU3TS.P4.D08 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 482
Score = 69.9 bits (35), Expect = 5e-010
Identities = 77/91 (84%)
Strand = Plus / Plus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
|||||||||||||| |||| ||||||||||| |||||||| ||||| || || |||||
Sbjct: 234 aggaaagggtagagatggacgatcacccagaaggcaaagaaaagcttgccaaaaagtggg 293
Query: 598 ccccatgattggtagccactgttgatagcat 628
||||| || || || ||||||||||| ||||
Sbjct: 294 ccccacgactgataaccactgttgatggcat 324
Score = 36.2 bits (18), Expect = 7.2
Identities = 69/86 (80%)
Strand = Plus / Plus
Query: 691 agagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgccttt 750
||||||||||| ||||||| || | |||||| ||||||| || || || | ||||||
Sbjct: 387 agagttgtccatttgaacaagtataattcagcagaatcaccgtcctcgtctgatgccttg 446
Query: 751 gatgtgaccgtgaagtttgtgtcgat 776
|| || || |||||||| ||||||||
Sbjct: 447 gacgtaacagtgaagttggtgtcgat 472
>gb|CV283069.1|CV283069 WS0186.B21_F15 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0186_F15 3', mRNA sequence
Length = 450
Score = 69.9 bits (35), Expect = 5e-010
Identities = 77/91 (84%)
Strand = Plus / Plus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
|||||||| ||||| |||| ||||||||||| || ||||| ||||| || || ||||||
Sbjct: 218 aggaaaggatagagatggatgatcacccagaaagcgaagaaaagcttgccaaagagtgga 277
Query: 598 ccccatgattggtagccactgttgatagcat 628
|||||||| || || ||||||||||| ||||
Sbjct: 278 ccccatgactgataaccactgttgattgcat 308
>gb|DT470299.1|DT470299 WS01920.C21_H07 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01920_H07 3', mRNA sequence
Length = 439
Score = 69.9 bits (35), Expect = 5e-010
Identities = 77/91 (84%)
Strand = Plus / Plus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
|||||||| ||||| |||| ||||||||||| || ||||| ||||| || || ||||||
Sbjct: 218 aggaaaggatagagatggatgatcacccagaaagcgaagaaaagcttgccaaagagtgga 277
Query: 598 ccccatgattggtagccactgttgatagcat 628
|||||||| || || ||||||||||| ||||
Sbjct: 278 ccccatgactgataaccactgttgattgcat 308
>gb|CA926289.1|CA926289 MTU6CR.P13.C05 Aspen root cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 429
Score = 67.9 bits (34), Expect = 2e-009
Identities = 217/278 (78%)
Strand = Plus / Minus
Query: 1754 ccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggtttgca 1813
||||||| ||||||||||| ||||| || ||||||||||| |||| ||| || || |||
Sbjct: 416 ccttgaaccccatctagacctttcatgtttatatcaaagaacacaacgttgcgattagca 357
Query: 1814 tatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagttttc 1873
|||| |||||| || ||||||||||| || || |||||||| |||||||| |||
Sbjct: 356 tatctatcatggcgatcgataccatcaaacctctgcggaaactggacatagcagagcttc 297
Query: 1874 cttcctagtgctggatccatcatgaaacacatagcctctctaagagctttgctgctattg 1933
| || ||| |||||||||| || ||||| || ||||| | ||| |||||| |||||
Sbjct: 296 ttcccaagttggggatccatcaaaaagcacatggcttctcttacagccttgctgttattg 237
Query: 1934 aagtagtgatcacaatccacattaagaagataagcaccattcgtcaggacagctgatacg 1993
| ||| || |||||||||| ||| | | | ||| |||| || || || ||||| ||
Sbjct: 236 atgtaatggtcacaatccaaattcaacataaaaggtgcattggtgagcactgctgagact 177
Query: 1994 cgaatcaaagcattcatggcaccagccttcttgtggtg 2031
||||||| |||||||||||||| || |||||||||||
Sbjct: 176 cgaatcagggcattcatggcacctgctttcttgtggtg 139
>gb|CF234438.1|CF234438 Ptajxojxo2F10F1012 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 67.9 bits (34), Expect = 2e-009
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
|||||||||||||| |||| ||||||||||| |||||||| ||||| || || |||||
Sbjct: 438 aggaaagggtagagatggacgatcacccagaaggcaaagaaaagcttgccaaagagtggg 379
Query: 598 ccccatgattggtagccactgttgat 623
||||| || || || |||||||||||
Sbjct: 378 ccccacgactgataaccactgttgat 353
Score = 67.9 bits (34), Expect = 2e-009
Identities = 91/110 (82%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| |||||||| ||||| || || |||||||| ||||||||||| || ||
Sbjct: 177 ccttggaaaacagcaaaaagatgggctgaaacaccaccaataacccaaaactgttcgttc 118
Query: 859 ctccaccaatcctcaatgccaacaccactccatcgaagctccaaaatacc 908
|||||||| || ||||| |||||||||||||| | | ||||||||||||
Sbjct: 117 ctccaccattcatcaatcccaacaccactccacctcatctccaaaatacc 68
>gb|CK097446.1|CK097446 UB51DPD11.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB51DPD11 3', mRNA sequence
Length = 481
Score = 67.9 bits (34), Expect = 2e-009
Identities = 79/94 (84%)
Strand = Plus / Plus
Query: 562 acccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttg 621
||||| || |||||||| ||||| || || || ||||||||||| ||||| ||||||||
Sbjct: 360 acccaaatagcaaagaagagcttgccaaagagaggaccccatgactggtatccactgttt 419
Query: 622 atagcatacgacactccagccactataccaacca 655
|| ||||| ||||| |||||||| ||||| ||||
Sbjct: 420 atggcataggacacaccagccacaatacccacca 453
>gb|CN519879.1|CN519879 GQ0108.B3_I06 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_I06 5', mRNA sequence
Length = 780
Score = 67.9 bits (34), Expect = 2e-009
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 693 agttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcctttga 752
||||||||||||||||| ||| ||||| | |||||||||||| ||||||| ||| |||||
Sbjct: 184 agttgtccacttgaacatatatagctcggtaaaatcaccatcttcatcggatgcttttga 125
Query: 753 tgtgac 758
|||||
Sbjct: 124 agtgac 119
Score = 61.9 bits (31), Expect = 1e-007
Identities = 97/119 (81%)
Strand = Plus / Minus
Query: 523 cccatgagacccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagc 582
||||| |||||||| ||||||||||| || || | |||||||||| |||||||| |||
Sbjct: 354 cccatcagacccttgaggaaagggtaaagatgaataatcacccagaaagcaaagaaaagc 295
Query: 583 ttcccgaatagtggaccccatgattggtagccactgttgatagcatacgacactccagc 641
|| || || || |||||||| ||||| || |||||||| || || || || ||||||||
Sbjct: 294 ttgccaaagaggggaccccaagattgataaccactgtttatggcgtaggagactccagc 236
>gb|CK320732.1|CK320732 X9SP01b11 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 769
Score = 67.9 bits (34), Expect = 2e-009
Identities = 100/122 (81%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| |||||||||||||| || || || ||||| ||||| ||||| |||||
Sbjct: 345 ccttggaagacagcaaagagatgagctgacacacctccaataacccagaactgttcattc 286
Query: 859 ctccaccaatcctcaatgccaacaccactccatcgaagctccaaaataccagtggcgaag 918
|||||||| || || || |||||||||||||||| | |||||||||||||| || |||
Sbjct: 285 ctccaccattcatcgatcccaacaccactccatctcatttccaaaataccagttgcaaag 226
Query: 919 at 920
||
Sbjct: 225 at 224
>gb|CV262834.1|CV262834 WS0202.B21_K05 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0202_K05 3', mRNA sequence
Length = 513
Score = 67.9 bits (34), Expect = 2e-009
Identities = 79/94 (84%)
Strand = Plus / Plus
Query: 562 acccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttg 621
||||| || |||||||| ||||| || || || ||||||||||| ||||| ||||||||
Sbjct: 406 acccaaatagcaaagaagagcttgccaaagagaggaccccatgactggtatccactgttt 465
Query: 622 atagcatacgacactccagccactataccaacca 655
|| ||||| ||||| |||||||| ||||| ||||
Sbjct: 466 atggcataggacacaccagccacaatacccacca 499
>gb|CV282433.1|CV282433 WS0184.B21_J19 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0184_J19 3', mRNA sequence
Length = 573
Score = 67.9 bits (34), Expect = 2e-009
Identities = 132/167 (79%)
Strand = Plus / Plus
Query: 562 acccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttg 621
||||| || |||||||| ||||| || || || ||||||||||| ||||| ||||||||
Sbjct: 403 acccaaatagcaaagaagagcttgccaaagagaggaccccatgactggtatccactgttt 462
Query: 622 atagcatacgacactccagccactataccaaccaggttaatcacaagcacagtggtnnnn 681
|| ||||| ||||| |||||||| ||||| |||| ||| | | || || |||||
Sbjct: 463 atggcataggacacgccagccacaatacccaccatgtttagtaaaatgactgtggttgga 522
Query: 682 nnnatcagaagagttgtccacttgaacacatacagctcagcaaaatc 728
|| ||||||| |||||| ||||||||||| ||||| ||||||||
Sbjct: 523 gggatgagaagagatgtccatttgaacacataaagctctgcaaaatc 569
>gb|AF072131.1|AF072131 Populus tremuloides secondary xylem cellulose synthase (celA) mRNA,
complete cds
Length = 3232
Score = 67.9 bits (34), Expect = 2e-009
Identities = 276/357 (77%)
Strand = Plus / Minus
Query: 2152 gttattcccaggccanggagtgccatcagccatggtccagccctcctcaggtattttttg 2211
||||||||||||||| || || ||||| ||| ||||| || || |||||| |||| ||
Sbjct: 1244 gttattcccaggccaaggtgttccatcttgcatagtccatccttcttcaggtgttttctg 1185
Query: 2212 cgcttttgcaacaagggcatcgatccgtactttgaactcttcatactccctcttcatagc 2271
|| ||||| || ||||||| | || |||||| |||||||||| ||||| ||||| ||
Sbjct: 1184 agcctttgctaccagggcattaactcggactttgtactcttcataatcccttttcattgc 1125
Query: 2272 ccgcctttctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagc 2331
| | ||||||||| ||||||||||| | ||||| || | |||||| || || | |
Sbjct: 1124 tctacgttctttcacgaaagaaggttgaaccttgtctttcaagtaatcaattttctgtga 1065
Query: 2332 aaagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccattt 2391
||||||||||| || || || |||||||| | ||| ||||| || |||||||| ||
Sbjct: 1064 gaagtaaaactccggtgctcttggttcaattgagaattttttgcagaacggaacccactt 1005
Query: 2392 ccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatc 2451
|||||||||||| || ||||| |||| |||||| | | |||||||| ||| |||||
Sbjct: 1004 ccttgcaaactcagctgtttctacaagagattcaaatgaaagcatagctgcaccatcatc 945
Query: 2452 agaaacataacatgatactttgtcaacagggtaatccacagcaagaatggacaggac 2508
||| || || || || ||||| || || || || ||||||||||| ||||| |||||
Sbjct: 944 agacacgtagcaggagactttatcgacgggatagtccacagcaaggatggaaaggac 888
Score = 54.0 bits (27), Expect = 3e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
||||||||||| ||| |||| ||||| ||||| || || ||||||||||| || |||| |
Sbjct: 2122 tgcatcttgaagccacttaagatatcctcagtgactgacccatatatccaaccaatctgt 2063
Query: 1321 ttcccccattc 1331
|| ||||||||
Sbjct: 2062 tttccccattc 2052
Score = 50.1 bits (25), Expect = 5e-004
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 1108 taccagataggacagtgtctgctaagtagaatttcaactgaaccaagagccca 1160
||||||| |||||||||||||||| | |||||| || ||||||||||||||
Sbjct: 2275 taccagaggggacagtgtctgctaaagaaaatttccacagaaccaagagccca 2223
Score = 44.1 bits (22), Expect = 0.029
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 2012 gcaccagccttcttgtggtgctggaagcctggcctctt 2049
||||||||||| |||||||||||| |||| || |||||
Sbjct: 1387 gcaccagcctttttgtggtgctggtagccaggtctctt 1350
Score = 40.1 bits (20), Expect = 0.46
Identities = 71/88 (80%)
Strand = Plus / Minus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
|||| |||| ||| |||| |||||| |||||||| || ||||| || || | || |||||
Sbjct: 2652 catcttcggctgcttttgctgtgacagtgaagttcgtatcgatgccagccaacattttta 2593
Query: 794 agagaccttggaacacagcaaagagatg 821
||| || ||||| || |||||||||||
Sbjct: 2592 agaatccctggaagaccgcaaagagatg 2565
Score = 40.1 bits (20), Expect = 0.46
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 1751 ggtccttgaatgccatctagacccttcatattaatatcaaagaa 1794
||||||||||||||||| | || ||||| |||| |||||||||
Sbjct: 1648 ggtccttgaatgccatccaaccctttcatgttaacatcaaagaa 1605
>gb|AY573574.1| Populus tremula x Populus tremuloides cellulose synthase (CesA3-2)
mRNA, complete cds
Length = 3358
Score = 67.9 bits (34), Expect = 2e-009
Identities = 276/357 (77%)
Strand = Plus / Minus
Query: 2152 gttattcccaggccanggagtgccatcagccatggtccagccctcctcaggtattttttg 2211
||||||||||||||| || || ||||| ||| ||||| || || |||||| |||| ||
Sbjct: 1305 gttattcccaggccaaggtgttccatcttgcatagtccatccttcttcaggtgttttctg 1246
Query: 2212 cgcttttgcaacaagggcatcgatccgtactttgaactcttcatactccctcttcatagc 2271
|| ||||| || ||||||| | || |||||| |||||||||| ||||| ||||| ||
Sbjct: 1245 agcctttgctaccagggcattaactcggactttgtactcttcataatcccttttcattgc 1186
Query: 2272 ccgcctttctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagc 2331
| | ||||||||| |||||||| || | ||||| || | |||||| || || | |
Sbjct: 1185 tctacgttctttcacgaaagaaggctgaaccttgtctttcaagtaatcaattttctgtga 1126
Query: 2332 aaagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccattt 2391
||||||||||| || || || |||||||| || ||| ||||| || |||||||| ||
Sbjct: 1125 gaagtaaaactccggtgctcttggttcaattgagtattttttgcagaacggaacccactt 1066
Query: 2392 ccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatc 2451
|||||||||||| || ||||| |||| |||||| | | |||||||| ||| |||||
Sbjct: 1065 ccttgcaaactcagctgtttctaccagagattcaaatgaaagcatagctgcaccatcatc 1006
Query: 2452 agaaacataacatgatactttgtcaacagggtaatccacagcaagaatggacaggac 2508
||| || || || || ||||| || || || || ||||||||||| ||||| |||||
Sbjct: 1005 agacacgtagcaggaaactttatcgacgggatagtccacagcaaggatggaaaggac 949
Score = 54.0 bits (27), Expect = 3e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
||||||||||| ||| |||| ||||| ||||| || || ||||| ||||| || ||||||
Sbjct: 2180 tgcatcttgaagccacttaagatatcctcagtgactgacccatagatccaaccaatctct 2121
Query: 1321 ttcccccattc 1331
|| ||||||||
Sbjct: 2120 tttccccattc 2110
Score = 50.1 bits (25), Expect = 5e-004
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 1108 taccagataggacagtgtctgctaagtagaatttcaactgaaccaagagccca 1160
||||||| |||||||||||||||| | |||||| || ||||||||||||||
Sbjct: 2333 taccagaggggacagtgtctgctaaagaaaatttccacagaaccaagagccca 2281
Score = 44.1 bits (22), Expect = 0.029
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 2012 gcaccagccttcttgtggtgctggaagcctggcctctt 2049
||||||||||| |||||||||||| |||| || |||||
Sbjct: 1445 gcaccagcctttttgtggtgctggtagccaggtctctt 1408
Score = 40.1 bits (20), Expect = 0.46
Identities = 71/88 (80%)
Strand = Plus / Minus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
|||| |||| ||| |||| |||||| |||||||| || ||||| || || | || |||||
Sbjct: 2710 catcttcggctgcttttgctgtgacagtgaagttcgtatcgatgccagccaacattttta 2651
Query: 794 agagaccttggaacacagcaaagagatg 821
||| || ||||| || |||||||||||
Sbjct: 2650 agaatccctggaagaccgcaaagagatg 2623
Score = 40.1 bits (20), Expect = 0.46
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 1751 ggtccttgaatgccatctagacccttcatattaatatcaaagaa 1794
||||||||||||||||| | || ||||| |||| |||||||||
Sbjct: 1706 ggtccttgaatgccatccaaccctttcatgttaacatcaaagaa 1663
>gb|AY573575.1| Populus tremula x Populus tremuloides cellulose synthase (CesA4)
mRNA, complete cds
Length = 3778
Score = 67.9 bits (34), Expect = 2e-009
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
||||||||||| || || || ||||| || |||||||||||||||||||| || | ||
Sbjct: 2612 tgcatcttgaatcctgtcaagatatcctctgtaacagagccatatatccagccaacttcc 2553
Query: 1321 ttcccccattctgttttatcctcata 1346
|| ||||||||||||||||| |||||
Sbjct: 2552 tttccccattctgttttatcttcata 2527
Score = 67.9 bits (34), Expect = 2e-009
Identities = 186/234 (79%), Gaps = 2/234 (0%)
Strand = Plus / Minus
Query: 1835 ccatcaaatctttgtggaaactgaacatagcaagttttccttcctagtgctggatccatc 1894
|||||||||| ||| |||||||| ||||| ||| ||| | ||| || ||||||||||
Sbjct: 2042 ccatcaaatcgttgaggaaactgcacataacaaacttttttccctgatgttggatccatc 1983
Query: 1895 atgaaacacatagcctctctaagagctttgctgctattgaagtagtgatcacaatccaca 1954
||||||||||| || |||||||| |||||||| | || | || || |||||||| |||
Sbjct: 1982 atgaaacacatggcttctctaagtgctttgctattgttaatatattggtcacaatcaaca 1923
Query: 1955 ttaagaagataagcaccattcgtcaggacagctgatacgcgaatcaaagcattcatggca 2014
|| |||||||||| |||| | ||| || || || || || |||| | |||||||||
Sbjct: 1922 ttcagaagataaggggcatttgacagaactgcagagacccgcatcagtgaattcatggcc 1863
Query: 2015 ccagccttcttgtggtg-ctggaagcctggcctcttttcacgagaaacataaac 2067
||||||||||| ||||| | ||| ||| | ||||| |||||||||||||||||
Sbjct: 1862 ccagccttcttatggtgtgtcgaaccct-gtctcttctcacgagaaacataaac 1810
Score = 50.1 bits (25), Expect = 5e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 2240 actttgaactcttcatactccctcttcatagcccgcctttc 2280
||||||||||||||||| || |||||||| || ||||||||
Sbjct: 1637 actttgaactcttcatattctctcttcatggcacgcctttc 1597
Score = 48.1 bits (24), Expect = 0.002
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
||||| ||||||||||||||||| ||||| | ||||| || ||| |||| || | ||||
Sbjct: 3332 aggaaggggtagaggtggaggatgacccatagggcaaaaaatagcctcccaaacaatgga 3273
Query: 598 ccccatga 605
||||||||
Sbjct: 3272 ccccatga 3265
Score = 42.1 bits (21), Expect = 0.12
Identities = 90/113 (79%)
Strand = Plus / Minus
Query: 1102 taaccataccagataggacagtgtctgctaagtagaatttcaactgaaccaagagcccag 1161
||||||||||| || ||||||||||| || | | ||| ||||| ||||| || |||||
Sbjct: 2771 taaccataccaaattggacagtgtctactgaagaaaatctcaacagaaccgagggcccac 2712
Query: 1162 cgtaacacttggttgagacgatcagaaagattaattggagcagaacccttgaa 1214
|| | || |||| |||||||| || || ||||||||||| || ||||||||
Sbjct: 2711 cgaagaacctggtgtagacgatctgacaggttaattggagctgaccccttgaa 2659
Score = 42.1 bits (21), Expect = 0.12
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 2368 tttcttgcaaaagggaacccatttccttgcaaa 2400
|||||||||||| |||||||| ||||| |||||
Sbjct: 1509 tttcttgcaaaatggaacccacttcctagcaaa 1477
Score = 40.1 bits (20), Expect = 0.46
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 835 ccaatgacccaaaactgctcatttctccacca 866
||||| |||||||| || ||||||||||||||
Sbjct: 3038 ccaatcacccaaaattgttcatttctccacca 3007
>gb|DQ004570.1| Populus tomentosa cellulose synthase (cesa1) mRNA, complete cds
Length = 3215
Score = 67.9 bits (34), Expect = 2e-009
Identities = 276/357 (77%)
Strand = Plus / Minus
Query: 2152 gttattcccaggccanggagtgccatcagccatggtccagccctcctcaggtattttttg 2211
||||||||||||||| || || ||||| ||| ||||| || || |||||| |||| ||
Sbjct: 1227 gttattcccaggccaaggtgttccatcttgcatagtccatccttcttcaggtgttttctg 1168
Query: 2212 cgcttttgcaacaagggcatcgatccgtactttgaactcttcatactccctcttcatagc 2271
|| ||||| || ||||||| | || |||||| |||||||||| ||||| ||||| ||
Sbjct: 1167 agcctttgctaccagggcattaactcggactttgtactcttcataatcccttttcattgc 1108
Query: 2272 ccgcctttctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagc 2331
| | ||||||||| ||||||||||| | ||||| || | |||||| || || | |
Sbjct: 1107 tctacgttctttcacgaaagaaggttgaaccttgtctttcaagtaatcaattttctgtga 1048
Query: 2332 aaagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccattt 2391
||||||||||| || || || |||||||| | ||| ||||| || |||||||| ||
Sbjct: 1047 gaagtaaaactccggtgctcttggttcaattgagaattttttgcagaacggaacccactt 988
Query: 2392 ccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatc 2451
|||||||||||| || ||||| |||| |||||| | | |||||||| ||| |||||
Sbjct: 987 ccttgcaaactcagctgtttctacaagagattcaaatgaaagcatagctgcaccatcatc 928
Query: 2452 agaaacataacatgatactttgtcaacagggtaatccacagcaagaatggacaggac 2508
||| || || || || ||||| || || || || ||||||||||| ||||| |||||
Sbjct: 927 agacacgtagcaggagactttatcgacgggatagtccacagcaaggatggaaaggac 871
Score = 54.0 bits (27), Expect = 3e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
||||||||||| ||| |||| ||||| ||||| || || ||||||||||| || |||| |
Sbjct: 2105 tgcatcttgaagccacttaagatatcctcagtgactgacccatatatccaaccaatctgt 2046
Query: 1321 ttcccccattc 1331
|| ||||||||
Sbjct: 2045 tttccccattc 2035
Score = 50.1 bits (25), Expect = 5e-004
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 1108 taccagataggacagtgtctgctaagtagaatttcaactgaaccaagagccca 1160
||||||| |||||||||||||||| | |||||| || ||||||||||||||
Sbjct: 2258 taccagaggggacagtgtctgctaaagaaaatttccacagaaccaagagccca 2206
Score = 44.1 bits (22), Expect = 0.029
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 2012 gcaccagccttcttgtggtgctggaagcctggcctctt 2049
||||||||||| |||||||||||| |||| || |||||
Sbjct: 1370 gcaccagcctttttgtggtgctggtagccaggtctctt 1333
Score = 40.1 bits (20), Expect = 0.46
Identities = 71/88 (80%)
Strand = Plus / Minus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
|||| |||| ||| |||| |||||| |||||||| || ||||| || || | || |||||
Sbjct: 2635 catcttcggctgcttttgctgtgacagtgaagttcgtatcgatgccagccaacattttta 2576
Query: 794 agagaccttggaacacagcaaagagatg 821
||| || ||||| || |||||||||||
Sbjct: 2575 agaatccctggaagaccgcaaagagatg 2548
Score = 40.1 bits (20), Expect = 0.46
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 1751 ggtccttgaatgccatctagacccttcatattaatatcaaagaa 1794
||||||||||||||||| | || ||||| |||| |||||||||
Sbjct: 1631 ggtccttgaatgccatccaaccctttcatgttaacatcaaagaa 1588
>gb|BI127743.1|BI127743 G065P23Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 502
Score = 63.9 bits (32), Expect = 3e-008
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
||||| ||||||||||||||||| ||||| | ||||| || ||| ||||||||| ||||
Sbjct: 361 aggaaggggtagaggtggaggatgacccatagggcaaaaaatagcctcccgaataatgga 302
Query: 598 ccccatga 605
||||||||
Sbjct: 301 ccccatga 294
Score = 40.1 bits (20), Expect = 0.46
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 835 ccaatgacccaaaactgctcatttctccacca 866
||||| |||||||| || ||||||||||||||
Sbjct: 67 ccaatcacccaaaattgttcatttctccacca 36
>gb|BI128874.1|BI128874 G082P82Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 450
Score = 63.9 bits (32), Expect = 3e-008
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
||||| ||||||||||||||||| ||||| | ||||| || ||| ||||||||| ||||
Sbjct: 361 aggaaggggtagaggtggaggatgacccatagggcaaaaaatagcctcccgaataatgga 302
Query: 598 ccccatga 605
||||||||
Sbjct: 301 ccccatga 294
Score = 40.1 bits (20), Expect = 0.46
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 835 ccaatgacccaaaactgctcatttctccacca 866
||||| |||||||| || ||||||||||||||
Sbjct: 67 ccaatcacccaaaattgttcatttctccacca 36
>gb|AY330166.1| Populus tremuloides CesA7A-like mRNA, partial cds
Length = 568
Score = 63.9 bits (32), Expect = 3e-008
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 1835 ccatcaaatctttgtggaaactgaacatagca 1866
||||||||||||||||||||||||||||||||
Sbjct: 32 ccatcaaatctttgtggaaactgaacatagca 1
>gb|AY573573.2| Populus tremula x Populus tremuloides cellulose synthase (CesA3-1)
mRNA, complete cds
Length = 3250
Score = 63.9 bits (32), Expect = 3e-008
Identities = 140/176 (79%)
Strand = Plus / Minus
Query: 2333 aagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttc 2392
|||||||||||||| || || |||||||| | ||| ||||| || |||||||| |||
Sbjct: 1041 aagtaaaactctggtgctcttggttcaattgagaattttttgcagaatggaacccacttc 982
Query: 2393 cttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatca 2452
||||||||||| || ||||| |||| |||||| || | |||||| | ||| ||||||
Sbjct: 981 cttgcaaactcagctgtttctacaagagattcaaatgtaagcatagcagcaccatcatca 922
Query: 2453 gaaacataacatgatactttgtcaacagggtaatccacagcaagaatggacaggac 2508
|| ||||| || || ||||| || || || || ||||||||||| ||||| |||||
Sbjct: 921 gacacatagcaggaaactttatccacgggatagtccacagcaaggatggaaaggac 866
Score = 54.0 bits (27), Expect = 3e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
||||||||||| ||| |||| ||||| ||||| || || ||||| ||||| || ||||||
Sbjct: 2097 tgcatcttgaatccacttaagatatcctcagtgaccgacccataaatccaaccaatctct 2038
Query: 1321 ttcccccattc 1331
|| ||||||||
Sbjct: 2037 tttccccattc 2027
Score = 50.1 bits (25), Expect = 5e-004
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 1715 tgcctattgaaacagcatcctgttcccacataaacaggtccttgaatgccatctagaccc 1774
|||||||||||| || || ||||||||||| | ||||||||||||||||| | ||
Sbjct: 1659 tgcctattgaaaacacaaccagttcccacatacattggtccttgaatgccatccaatcct 1600
Query: 1775 ttcatattaatatcaaagaagacaatgtt 1803
||||| |||| ||||||||| || |||||
Sbjct: 1599 ttcatgttaacatcaaagaaaactatgtt 1571
Score = 46.1 bits (23), Expect = 0.007
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1036 gatgtaattggataaacaatggtgttgatgtatgc 1070
||||||| |||||||||||||||||| || |||||
Sbjct: 2325 gatgtaaatggataaacaatggtgtttatatatgc 2291
Score = 40.1 bits (20), Expect = 0.46
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 841 acccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatc 892
||||| ||||| ||||| | |||| |||| ||||||| |||||||||||||
Sbjct: 2520 acccagaactgttcattacgccacaaatcttcaatgctgacaccactccatc 2469
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctc 719
|||||||| ||||||||||||| || ||| |||||
Sbjct: 2673 atcagaagtgttgtccacttgaccatatagagctc 2639
Score = 36.2 bits (18), Expect = 7.2
Identities = 33/38 (86%)
Strand = Plus / Minus
Query: 2012 gcaccagccttcttgtggtgctggaagcctggcctctt 2049
|||||||| ||||||||||| ||| |||| || |||||
Sbjct: 1362 gcaccagctttcttgtggtgttggtagccaggtctctt 1325
>gb|BU897991.1|BU897991 X073A11 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 563
Score = 61.9 bits (31), Expect = 1e-007
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
|||||||||||| || || | |||||||| |||||||| ||||| |||||||| | |||
Sbjct: 321 atgcatcttgaagcctgtcaggatatcttctgtaacagaaccataaatccatccaacctc 262
Query: 1320 tttcccccattctgttttatcctcata 1346
||| |||||||| ||||| || |||||
Sbjct: 261 tttaccccattcggttttttcttcata 235
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1048 taaacaatggtgttgatgtatgccagtctctccag 1082
||||| |||||||||||||| || || ||||||||
Sbjct: 533 taaacgatggtgttgatgtaagcaagcctctccag 499
>gb|CF227502.1|CF227502 PtaD6G2G0214 Poplar cDNA library from wood tissues Populus alba x
Populus tremula cDNA 5', mRNA sequence
Length = 747
Score = 61.9 bits (31), Expect = 1e-007
Identities = 97/119 (81%)
Strand = Plus / Minus
Query: 523 cccatgagacccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagc 582
||||| |||||||| ||||||||||| || || | |||||||||| |||||||| |||
Sbjct: 218 cccatcagacccttgaggaaagggtaaagatgaataatcacccagaaagcaaagaaaagc 159
Query: 583 ttcccgaatagtggaccccatgattggtagccactgttgatagcatacgacactccagc 641
|| || || || |||||||| ||||| || |||||||| || || || || ||||||||
Sbjct: 158 ttgccaaagaggggaccccaagattgataaccactgtttatggcgtaggagactccagc 100
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 697 gtccacttgaacacatacagctcagcaaaatcacc 731
||||||||||||| ||| ||||| | |||||||||
Sbjct: 44 gtccacttgaacatataaagctcggtaaaatcacc 10
>gb|CF232701.1|CF232701 PtaJXO0014G1G0113 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 611
Score = 61.9 bits (31), Expect = 1e-007
Identities = 64/75 (85%)
Strand = Plus / Minus
Query: 1137 aatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaat 1196
||||||||| || ||||||||||| || | |||||||||||| ||||| || ||||| ||
Sbjct: 395 aatttcaacagagccaagagcccatcggagcacttggttgagccgatctgatagattgat 336
Query: 1197 tggagcagaaccctt 1211
||||| ||||||||
Sbjct: 335 gggagctgaaccctt 321
>gb|CF235639.1|CF235639 PtaJXT0025C12C1206 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 708
Score = 61.9 bits (31), Expect = 1e-007
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
|||||||||||| || || | |||||||| |||||||| ||||| |||||||| | |||
Sbjct: 537 atgcatcttgaagcctgtcaggatatcttctgtaacagaaccataaatccatccaacctc 478
Query: 1320 tttcccccattctgttttatcctcata 1346
||| |||||||| ||||| || |||||
Sbjct: 477 tttaccccattcggttttttcttcata 451
Score = 50.1 bits (25), Expect = 5e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 1693 aggatcatagccatacaaggcctgcctattgaa 1725
|||||||||||||||||||| |||||| |||||
Sbjct: 63 aggatcatagccatacaaggactgcctgttgaa 31
>gb|AJ778868.1|AJ778868 AJ778868 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000600007E10F1, mRNA sequence
Length = 672
Score = 61.9 bits (31), Expect = 1e-007
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
|||||||||||| || || | |||||||| |||||||| ||||| |||||||| | |||
Sbjct: 121 atgcatcttgaagcctgtcaggatatcttctgtaacagaaccataaatccatccaacctc 62
Query: 1320 tttcccccattctgttttatcctcata 1346
||| |||||||| ||||| || |||||
Sbjct: 61 tttaccccattcggttttttcttcata 35
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1048 taaacaatggtgttgatgtatgccagtctctccag 1082
||||| |||||||||||||| || || ||||||||
Sbjct: 333 taaacgatggtgttgatgtaagcaagcctctccag 299
>gb|DV465848.1|DV465848 MTUNUL1.P43.H11 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 879
Score = 61.9 bits (31), Expect = 1e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
||||||||||| ||| |||| ||||| ||||| || || ||||||||||| || ||||||
Sbjct: 556 tgcatcttgaacccacttaagatatcctcagtgactgaaccatatatccaaccaatctct 497
Query: 1321 ttcccccattc 1331
|| ||||||||
Sbjct: 496 tttccccattc 486
Score = 50.1 bits (25), Expect = 5e-004
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 1108 taccagataggacagtgtctgctaagtagaatttcaactgaaccaagagccca 1160
||||||| |||||||||||||||| | |||||| || ||||||||||||||
Sbjct: 709 taccagaggggacagtgtctgctaaagaaaatttccacagaaccaagagccca 657
Score = 48.1 bits (24), Expect = 0.002
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 1715 tgcctattgaaacagcatcctgttcccacataaacaggtccttgaatgccatctagaccc 1774
|||||||||||| || || ||||| ||||| || ||||||||||||||||| | ||
Sbjct: 118 tgcctattgaaaacacaaccagttcctacatatactggtccttgaatgccatccaaccct 59
Query: 1775 ttcatattaatatcaaagaa 1794
||||| |||| |||||||||
Sbjct: 58 ttcatgttaacatcaaagaa 39
>gb|DV466748.1|DV466748 MTUNUL1.P9.G02 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 831
Score = 61.9 bits (31), Expect = 1e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
||||||||||| ||| |||| ||||| ||||| || || ||||||||||| || ||||||
Sbjct: 326 tgcatcttgaacccacttaagatatcctcagtgactgaaccatatatccaaccaatctct 267
Query: 1321 ttcccccattc 1331
|| ||||||||
Sbjct: 266 tttccccattc 256
Score = 50.1 bits (25), Expect = 5e-004
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 1108 taccagataggacagtgtctgctaagtagaatttcaactgaaccaagagccca 1160
||||||| |||||||||||||||| | |||||| || ||||||||||||||
Sbjct: 479 taccagaggggacagtgtctgctaaagaaaatttccacagaaccaagagccca 427
>gb|CF216199.1|CF216199 PT1009 Hybrid aspen xylem up-regulated Populus alba x Populus
tremula cDNA clone PT1009, mRNA sequence
Length = 249
Score = 60.0 bits (30), Expect = 5e-007
Identities = 96/118 (81%)
Strand = Plus / Minus
Query: 760 gtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaacacagcaaagaga 819
||||||||||||||||| |||||| ||||| | ||||||||||| |||||||||||
Sbjct: 195 gtgaagtttgtgtcgatacctgctgaaactttcaggagaccttggacaacagcaaagagg 136
Query: 820 tgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaatcctcaatgc 877
|| || || ||| || || ||||| || |||| ||||||||||| ||||||||||
Sbjct: 135 tgagctgatacgcctcctataacccagaattgctagtttctccaccattcctcaatgc 78
>gb|CF234212.1|CF234212 PtaJXO3H12H1216 Poplar cDNA library from young opposite xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 462
Score = 60.0 bits (30), Expect = 5e-007
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaa 1188
||||||||||| ||||| |||||||| || | ||||||||| ||||||||||||
Sbjct: 54 agaatttcaacagaacccagagcccatcgaagcacttggttcagacgatcagaa 1
Score = 44.1 bits (22), Expect = 0.029
Identities = 51/60 (85%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 832 ccaccaatgacccaaaactgctcatttctccaccaa-tcctcaatgccaacaccactcca 890
||||| |||||||| |||| ||||| |||||||| || ||||| ||||||||||||||
Sbjct: 361 ccaccgatgacccannactgttcattcctccaccagctcatcaatcccaacaccactcca 302
>gb|CK092703.1|CK092703 G092P25.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G092P25 3', mRNA sequence
Length = 684
Score = 60.0 bits (30), Expect = 5e-007
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 562 acccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttg 621
||||| || |||||||| ||||| || || || ||||||||||| ||||| || |||||
Sbjct: 523 acccaaatagcaaagaagagcttgccaaagagaggaccccatgactggtatccgctgttt 582
Query: 622 atagcatacgacactccagccactataccaacca 655
|| ||||| ||||| |||||||| ||||| ||||
Sbjct: 583 atggcataggacacaccagccacaatacccacca 616
>gb|CK102806.1|CK102806 G092P25.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G092P25 5', mRNA sequence
Length = 448
Score = 60.0 bits (30), Expect = 5e-007
Identities = 128/163 (78%)
Strand = Plus / Minus
Query: 562 acccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttg 621
||||| || |||||||| ||||| || || || ||||||||||| ||||| || |||||
Sbjct: 163 acccaaatagcaaagaagagcttgccaaagagaggaccccatgactggtatccgctgttt 104
Query: 622 atagcatacgacactccagccactataccaaccaggttaatcacaagcacagtggtnnnn 681
|| ||||| ||||| |||||||| ||||| |||| ||| | |||| || |||||
Sbjct: 103 atggcataggacacaccagccacaatacccaccatgtttagtacaatgactgtggttgga 44
Query: 682 nnnatcagaagagttgtccacttgaacacatacagctcagcaa 724
|| ||||||| |||||| ||||||||||| ||||| ||||
Sbjct: 43 gggatgagaagagatgtccatttgaacacataaagctctgcaa 1
>gb|BP923939.1|BP923939 BP923939 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-025_K01.f 5', mRNA sequence
Length = 413
Score = 60.0 bits (30), Expect = 5e-007
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 2002 agcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaac 2061
|||||||||||| || |||||||||| ||| | ||||||| | ||| |||||||||||
Sbjct: 220 agcattcatggcccctgccttcttgttgtgatcatagcctggacgcttctcacgagaaac 161
Query: 2062 ataaacaagc 2071
||||||||||
Sbjct: 160 ataaacaagc 151
Score = 38.2 bits (19), Expect = 1.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1887 gatccatcatgaaacacat 1905
|||||||||||||||||||
Sbjct: 335 gatccatcatgaaacacat 317
>gb|BP928099.1|BP928099 BP928099 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-078_M16.f 5', mRNA sequence
Length = 384
Score = 60.0 bits (30), Expect = 5e-007
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 2002 agcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaac 2061
|||||||||||| || |||||||||| ||| | ||||||| | ||| |||||||||||
Sbjct: 257 agcattcatggcccctgccttcttgttgtgatcatagcctggacgcttctcacgagaaac 198
Query: 2062 ataaacaagc 2071
||||||||||
Sbjct: 197 ataaacaagc 188
Score = 38.2 bits (19), Expect = 1.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1887 gatccatcatgaaacacat 1905
|||||||||||||||||||
Sbjct: 372 gatccatcatgaaacacat 354
>gb|AY330165.1| Populus tremuloides CesA5A-like mRNA, partial cds
Length = 566
Score = 60.0 bits (30), Expect = 5e-007
Identities = 135/170 (79%)
Strand = Plus / Minus
Query: 1697 tcatagccatacaaggcctgcctattgaaacagcatcctgttcccacataaacaggtcct 1756
|||||||||||||||||| ||||||||| || ||||| |||||||| ||||| |||
Sbjct: 170 tcatagccatacaaggccgttctattgaaaacacaccctgtacccacatatacagggcct 111
Query: 1757 tgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggtttgcatat 1816
|| || ||||| | || | | ||| ||||||||||| ||| |||| ||||| ||||||
Sbjct: 110 tggattccatccaatcctcttaaatttatatcaaagaaaacagtgttacggttggcatat 51
Query: 1817 cgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagca 1866
||||| | || || ||||||||||| || || ||||||||||||||
Sbjct: 50 cgatcgtttctatcaatcccatcaaatctctgagggaactgaacatagca 1
>gb|AI162302.1|AI162302 A015P47U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 445
Score = 58.0 bits (29), Expect = 2e-006
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 1282 atatcttcagtaacagagccatatatccatccgatctctttcccccattctgttttatcc 1341
||||| || |||||||||||||||||||| || | || || |||||||||||||||||
Sbjct: 325 atatcctctgtaacagagccatatatccagccaacttcctttccccattctgttttatct 266
Query: 1342 tcata 1346
|||||
Sbjct: 265 tcata 261
>gb|CV229552.1|CV229552 WS01913.B21_K14 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01913_K14 3', mRNA sequence
Length = 799
Score = 58.0 bits (29), Expect = 2e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 562 acccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttg 621
||||| || |||||||||||||| || || || ||||||||||| ||||| || |||||
Sbjct: 621 acccaaatagcaaagaacagcttgccaaagagcggaccccatgactggtacccgctgttt 680
Query: 622 atagcatacgacactccagccactatacc 650
|| ||| | ||||| |||||||| |||||
Sbjct: 681 atggcaaaggacacaccagccacaatacc 709
Score = 50.1 bits (25), Expect = 5e-004
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 696 tgtccacttgaacacatacagctcagcaaaatcaccatcatcatc 740
|||||| ||||||||||| ||||| |||||||| ||||| |||||
Sbjct: 755 tgtccatttgaacacataaagctctgcaaaatccccatcctcatc 799
>gb|AY162184.1| Populus tremuloides cellulose synthase-like protein D4 (CSLD4) mRNA,
partial cds
Length = 3570
Score = 58.0 bits (29), Expect = 2e-006
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
||||||||||| || |||||||||| ||| | ||||||| | ||| ||||||||||||
Sbjct: 1723 gcattcatggcccctgccttcttgttgtgatcatagcctggacgcttctcacgagaaaca 1664
Query: 2063 taaacaagc 2071
|||||||||
Sbjct: 1663 taaacaagc 1655
Score = 44.1 bits (22), Expect = 0.029
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 843 ccaaaactgctcatttctccaccaatcctc 872
||||||||||||||| |||||||| |||||
Sbjct: 2858 ccaaaactgctcattcctccaccactcctc 2829
Score = 38.2 bits (19), Expect = 1.8
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1284 atcttcagtaacagagccatatatcca 1310
||||||||||||||| ||||| |||||
Sbjct: 2423 atcttcagtaacagatccataaatcca 2397
Score = 38.2 bits (19), Expect = 1.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1887 gatccatcatgaaacacat 1905
|||||||||||||||||||
Sbjct: 1839 gatccatcatgaaacacat 1821
>gb|BI129778.1|BI129778 G095P49Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 484
Score = 56.0 bits (28), Expect = 8e-006
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
|||||||||||| || || | |||||||| |||||||| ||||| |||||||| | |||
Sbjct: 75 atgcatcttgaagcctgtcaggatatcttctgtaacagaaccataaatccatccaacctc 16
Query: 1320 tttcccccattc 1331
||| ||||||||
Sbjct: 15 tttaccccattc 4
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1048 taaacaatggtgttgatgtatgccagtctctccag 1082
||||| |||||||||||||| || || ||||||||
Sbjct: 287 taaacgatggtgttgatgtaagcaagcctctccag 253
>gb|BI130668.1|BI130668 G109P08Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 336
Score = 56.0 bits (28), Expect = 8e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 2333 aagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaaccca 2388
||||| ||||| |||||||| || |||||||| || ||||||||||| ||||||||
Sbjct: 295 aagtagaactcaggagcccttggctcaatgttatgcttcttgcaaaatggaaccca 240
>gb|CA926496.1|CA926496 MTU6CR.P15.F11 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 294
Score = 56.0 bits (28), Expect = 8e-006
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 841 acccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatc 892
|||||||| ||||| ||||||||||| || ||||| ||||| ||||||||||
Sbjct: 171 acccaaaattgctcgtttctccaccactcgtcaataccaaccccactccatc 120
>gb|CA926817.1|CA926817 MTU6CR.P1.E04 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 294
Score = 56.0 bits (28), Expect = 8e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 841 acccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatc 892
|||||||| ||||| ||||||||||| || ||||| ||||| ||||||||||
Sbjct: 124 acccaaaattgctcgtttctccaccactcgtcaataccaaccccactccatc 175
>gb|CF229078.1|CF229078 PtaXM0021A1A0101 Poplar cDNA library from mature xylem Populus alba x
Populus tremula cDNA 5', mRNA sequence
Length = 537
Score = 56.0 bits (28), Expect = 8e-006
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 2334 agtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttcc 2393
|||| ||||| |||||||| || || ||||| || ||||||||||| ||||||||| | |
Sbjct: 162 agtagaactcaggagcccttggctcnatgttatgcttcttgcaaaatggaacccatcttc 103
Query: 2394 ttgcaaactctgcggtttc 2412
| |||||||| || |||||
Sbjct: 102 tagcaaactcagcagtttc 84
Score = 48.1 bits (24), Expect = 0.002
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 1985 gctgatacgcgaatcaaagcattcatggcaccagccttcttgtggtg 2031
||||| || ||||||| |||||||||||| || || |||||||||||
Sbjct: 511 gctgagactcgaatcagagcattcatggcncctgctttcttgtggtg 465
>gb|CK103234.1|CK103234 G109P08.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G109P08 5', mRNA sequence
Length = 312
Score = 56.0 bits (28), Expect = 8e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 2333 aagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaaccca 2388
||||| ||||| |||||||| || |||||||| || ||||||||||| ||||||||
Sbjct: 304 aagtagaactcaggagcccttggctcaatgttatgcttcttgcaaaatggaaccca 249
>gb|CV234604.1|CV234604 WS01215.B21.1_I11 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01215_I11 3', mRNA sequence
Length = 613
Score = 56.0 bits (28), Expect = 8e-006
Identities = 139/176 (78%)
Strand = Plus / Plus
Query: 1751 ggtccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggttt 1810
|||||||| | |||||||| || |||||||| ||||||||||| |||| ||||| ||
Sbjct: 344 ggtccttgtaagccatctaatcctttcatattgatatcaaagaatacaacattccgattc 403
Query: 1811 gcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagtt 1870
| |||| |||||| || || |||||||||| ||| |||||||| ||||| || |
Sbjct: 404 gagtatctatcatgacgatcaatgccatcaaatcgttgaggaaactgcacataacagact 463
Query: 1871 ttccttcctagtgctggatccatcatgaaacacatagcctctctaagagctttgct 1926
|| ||||| || ||||||||||| ||||||||| || |||||||| ||| ||||
Sbjct: 464 ttttttcctgatgttggatccatcaagaaacacattgcttctctaagtgctctgct 519
>gb|DT475055.1|DT475055 WS0125.BR_N16 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0125_N16 5', mRNA sequence
Length = 595
Score = 56.0 bits (28), Expect = 8e-006
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccac 886
||||| |||||||| ||||||||||||||||| || || || ||||||||||
Sbjct: 291 ccaatcacccaaaattgctcatttctccaccagtcatctattccaacaccac 240
Score = 44.1 bits (22), Expect = 0.029
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 532 cccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaat 591
||||| ||||| ||||||||||||| ||| ||||| | || || |||||| |||| ||
Sbjct: 592 cccttgaggaatgggtagaggtggatgatgacccacaaggcgaaaaacagcctcccaaac 533
Query: 592 agtggaccccatga 605
| ||||||||||||
Sbjct: 532 aatggaccccatga 519
>gb|DT475135.1|DT475135 WS0126.BR_C03 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0126_C03 5', mRNA sequence
Length = 471
Score = 56.0 bits (28), Expect = 8e-006
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccac 886
||||| |||||||| ||||||||||||||||| || || || ||||||||||
Sbjct: 291 ccaatcacccaaaattgctcatttctccaccagtcatctattccaacaccac 240
>gb|AI163338.1|AI163338 A040P09U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 285
Score = 54.0 bits (27), Expect = 3e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
||||||||||| ||| |||| ||||| ||||| || || ||||| ||||| || ||||||
Sbjct: 137 tgcatcttgaatccacttaagatatcctcagtgaccgacccataaatccaaccaatctct 78
Query: 1321 ttcccccattc 1331
|| ||||||||
Sbjct: 77 tttccccattc 67
>gb|BI127228.1|BI127228 G057P27Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 435
Score = 54.0 bits (27), Expect = 3e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
||||||||||| ||| |||| ||||| ||||| || || || |||||||| || ||||||
Sbjct: 131 tgcatcttgaagccacttaagatatcctcagtgactgacccgtatatccaaccaatctct 72
Query: 1321 ttcccccattc 1331
|| ||||||||
Sbjct: 71 tttccccattc 61
>gb|BI131187.1|BI131187 G116P69Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 463
Score = 54.0 bits (27), Expect = 3e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
||||||||||| ||| |||| ||||| ||||| || || ||||| ||||| || ||||||
Sbjct: 162 tgcatcttgaatccacttaagatatcctcagtgaccgacccataaatccaaccaatctct 103
Query: 1321 ttcccccattc 1331
|| ||||||||
Sbjct: 102 tttccccattc 92
Score = 46.1 bits (23), Expect = 0.007
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1036 gatgtaattggataaacaatggtgttgatgtatgc 1070
||||||| |||||||||||||||||| || |||||
Sbjct: 390 gatgtaaatggataaacaatggtgtttatatatgc 356
>gb|BU895617.1|BU895617 X028D07 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 571
Score = 54.0 bits (27), Expect = 3e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
||||||||||| ||| |||| ||||| ||||| || || ||||| ||||| || ||||||
Sbjct: 296 tgcatcttgaagccacttaagatatcctcagtgactgacccatagatccaaccaatctct 237
Query: 1321 ttcccccattc 1331
|| ||||||||
Sbjct: 236 tttccccattc 226
Score = 50.1 bits (25), Expect = 5e-004
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 1108 taccagataggacagtgtctgctaagtagaatttcaactgaaccaagagccca 1160
||||||| |||||||||||||||| | |||||| || ||||||||||||||
Sbjct: 449 taccagaggggacagtgtctgctaaagaaaatttccacagaaccaagagccca 397
>gb|CF216196.1|CF216196 PT1004 Hybrid aspen xylem up-regulated Populus alba x Populus tremula
cDNA clone PT1004, mRNA sequence
Length = 237
Score = 54.0 bits (27), Expect = 3e-005
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 1141 tcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattgga 1200
||||| |||||||||||||| || | |||||||||||| ||||| || ||||| || |||
Sbjct: 166 tcaacagaaccaagagcccatcgaagcacttggttgagtcgatctgatagattgatggga 225
Query: 1201 gcagaaccctt 1211
|| || |||||
Sbjct: 226 gctgagccctt 236
>gb|CF232837.1|CF232837 PtaJXO0016D5D0507 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 770
Score = 54.0 bits (27), Expect = 3e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 1141 tcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattgga 1200
||||| |||||||||||||| || | |||||||||||| ||||| || ||||| || |||
Sbjct: 330 tcaacagaaccaagagcccatcgaagcacttggttgagtcgatctgatagattgatggga 271
Query: 1201 gcagaaccctt 1211
|| || |||||
Sbjct: 270 gctgagccctt 260
Score = 36.2 bits (18), Expect = 7.2
Identities = 113/147 (76%)
Strand = Plus / Minus
Query: 731 catcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactt 790
||||||||| | |||||| |||||||| || ||||||| |||||| || | || ||||
Sbjct: 743 catcatcatntggtgccttggatgtgacagtnaagtttgggtcgataccagntaaaactt 684
Query: 791 ttaagagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaact 850
| | |||| | ||| ||||||||||| || | || |||||||| ||||| || |
Sbjct: 683 tcagaagacntcggacaacagcaaagaggtgagntgatacaccaccaataacccagaatt 624
Query: 851 gctcatttctccaccaatcctcaatgc 877
||| ||| ||||||| ||||||||||
Sbjct: 623 gctngtttntccaccattcctcaatgc 597
>gb|CK107777.1|CK107777 G057P27 Populus tension wood cDNA library Populus tremula x Populus
tremuloides cDNA clone G057P27 5', mRNA sequence
Length = 481
Score = 54.0 bits (27), Expect = 3e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
||||||||||| ||| |||| ||||| ||||| || || || |||||||| || ||||||
Sbjct: 130 tgcatcttgaagccacttaagatatcctcagtgactgacccgtatatccaaccaatctct 71
Query: 1321 ttcccccattc 1331
|| ||||||||
Sbjct: 70 tttccccattc 60
>gb|CK319325.1|CK319325 X9P09e02 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 251
Score = 54.0 bits (27), Expect = 3e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
||||||||||| ||| |||| ||||| | ||| || || ||||||||||| || ||||||
Sbjct: 81 tgcatcttgaagccacttaagatatcctaagtgactgaaccatatatccaaccaatctct 22
Query: 1321 ttcccccattc 1331
|| ||||||||
Sbjct: 21 tttccccattc 11
Score = 50.1 bits (25), Expect = 5e-004
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 1108 taccagataggacagtgtctgctaagtagaatttcaactgaaccaagagccca 1160
||||||| |||||||||||||||| | |||||| || ||||||||||||||
Sbjct: 234 taccagaggggacagtgtctgctaaagaaaatttccacagaaccaagagccca 182
>gb|CV268371.1|CV268371 WS0205.B21_E18 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0205_E18 3', mRNA sequence
Length = 702
Score = 54.0 bits (27), Expect = 3e-005
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 562 acccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttg 621
||||| || |||||||||||||| || || || ||||||||||| ||||| || |||||
Sbjct: 616 acccaaatagcaaagaacagcttgccaaagagcggaccccatgactggtacccgctgttt 675
Query: 622 atagcatacgacactccagccac 644
|| ||| | ||||| ||||||||
Sbjct: 676 atggcaaaggacacaccagccac 698
>gb|CK092951.1|CK092951 G101P46.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G101P46 3', mRNA sequence
Length = 831
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 595 ggaccccatgattggtagccactgttgatagcatacgacactccagccac 644
||||||||||| ||||| |||||||| || ||||| ||||| ||||||||
Sbjct: 702 ggaccccatgactggtatccactgtttatggcataggacacaccagccac 751
>gb|CK317759.1|CK317759 B9P01d09 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 726
Score = 52.0 bits (26), Expect = 1e-004
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagctt 584
|||||||||||||| ||||| | |||||||||| ||||||||| |||||
Sbjct: 67 ttcaggaaagggtacaggtgaactatcacccagaatgcaaagaaaagctt 18
>gb|CK087778.1|CK087778 A020P56.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A020P56 3', mRNA sequence
Length = 826
Score = 50.1 bits (25), Expect = 5e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 832 ccaccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacacc 884
|||||||||||||| |||||||||||||| | ||| || | |||||||||||
Sbjct: 716 ccaccaatgacccagaactgctcatttcttccccagtcatggatgccaacacc 768
>gb|CV273968.1|CV273968 WS01712.B21_M13 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS01712_M13 3', mRNA sequence
Length = 701
Score = 50.1 bits (25), Expect = 5e-004
Identities = 67/81 (82%)
Strand = Plus / Plus
Query: 562 acccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttg 621
||||| || |||||||||||||| || || || ||||||||||| ||||| || |||||
Sbjct: 620 acccaaatagcaaagaacagcttgccaaacagcggaccccatgactggtacccgctgttt 679
Query: 622 atagcatacgacactccagcc 642
|| ||| | ||||| ||||||
Sbjct: 680 atggcaaaggacacaccagcc 700
>gb|CF232642.1|CF232642 PtaJXO0013H5H0515 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 674
Score = 48.1 bits (24), Expect = 0.002
Identities = 84/104 (80%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| |||||||| ||||| || ||| ||||| || |||||||| ||||||||
Sbjct: 427 ccttggaagacagcaaaaagatgagctgagacaccaccgataacccaaaattgctcatta 368
Query: 859 ctccaccaatcctcaatgccaacaccactccatcgaagctccaa 902
| |||| | |||| |||| || |||||||||||||| |||||
Sbjct: 367 cgccacaagtcctggatgctgactccactccatcgaagttccaa 324
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1048 taaacaatggtgttgatgtatgccagtctctccag 1082
||||| |||||||||||||| || || ||||||||
Sbjct: 178 taaacgatggtgttgatgtaagcaagcctctccag 144
>gb|CF233341.1|CF233341 PtaJXO0022B5B0503 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 656
Score = 48.1 bits (24), Expect = 0.002
Identities = 84/104 (80%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| |||||||| ||||| || ||| ||||| || |||||||| ||||||||
Sbjct: 194 ccttggaagacagcaaaaagatgagctgagacaccaccgataacccaaaattgctcatta 135
Query: 859 ctccaccaatcctcaatgccaacaccactccatcgaagctccaa 902
| |||| | |||| |||| || |||||||||||||| |||||
Sbjct: 134 cgccacaagtcctggatgctgactccactccatcgaagttccaa 91
Score = 40.1 bits (20), Expect = 0.46
Identities = 68/84 (80%)
Strand = Plus / Minus
Query: 523 cccatgagacccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagc 582
||||| ||||| || |||||||| ||||| |||| || ||||||| || || || |||
Sbjct: 467 cccatcagacctttgaggaaaggatagagatggacaatgacccagaaagcgaaaaatagc 408
Query: 583 ttcccgaatagtggaccccatgat 606
||||| |||| ||||||||||||
Sbjct: 407 ttcccaaataaaggaccccatgat 384
>gb|CN520055.1|CN520055 GQ0105.B3_H23 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0105_H23 5', mRNA sequence
Length = 833
Score = 48.1 bits (24), Expect = 0.002
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
||||| ||||||||||||||||| ||||| | ||||| || ||| |||| || | ||||
Sbjct: 381 aggaaggggtagaggtggaggatgacccataaggcaaaaaatagcctcccaaacaatgga 322
Query: 598 ccccatga 605
||||||||
Sbjct: 321 ccccatga 314
Score = 40.1 bits (20), Expect = 0.46
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 835 ccaatgacccaaaactgctcatttctccacca 866
||||| |||||||| || ||||||||||||||
Sbjct: 87 ccaatcacccaaaattgttcatttctccacca 56
>gb|BI128968.1|BI128968 G084P20Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 268
Score = 46.1 bits (23), Expect = 0.007
Identities = 71/87 (81%)
Strand = Plus / Minus
Query: 1260 atgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
|||||||||||| || || | |||||||| ||||||| ||||| |||||||| | |||
Sbjct: 207 atgcatcttgaagcctgtcaggatatcttctgtaacagtaccataaatccatccaacctc 148
Query: 1320 tttcccccattctgttttatcctcata 1346
||| ||||| || ||||| || |||||
Sbjct: 147 tttaccccactcggttttttcttcata 121
>gb|CK091716.1|CK091716 F120P33.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F120P33 3', mRNA sequence
Length = 570
Score = 46.1 bits (23), Expect = 0.007
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 532 cccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaat 591
||||| ||||| ||||| ||||||| || ||||| | ||||||||| ||||| || ||
Sbjct: 493 cccttgaggaacgggtaaaggtggacaattacccacaatgcaaagaatagcttaccaaag 552
Query: 592 agtggacccca 602
|||||||||||
Sbjct: 553 agtggacccca 563
>gb|CK101805.1|CK101805 F120P33.5pR Populus flower cDNA library Populus trichocarpa cDNA
clone F120P33 5', mRNA sequence
Length = 375
Score = 46.1 bits (23), Expect = 0.007
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 532 cccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaat 591
||||| ||||| ||||| ||||||| || ||||| | ||||||||| ||||| || ||
Sbjct: 78 cccttgaggaacgggtaaaggtggacaattacccacaatgcaaagaatagcttaccaaag 19
Query: 592 agtggacccca 602
|||||||||||
Sbjct: 18 agtggacccca 8
>gb|CN523759.1|CN523759 GQ015M04.T3_A09 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M04_A09 5', mRNA sequence
Length = 677
Score = 46.1 bits (23), Expect = 0.007
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 1102 taaccataccagataggacagtgtctgctaagtagaatttcaactgaaccaagagccca 1160
||||||||||| || ||||||||||| |||| | ||| || ||||||||||| |||||
Sbjct: 439 taaccataccaaattggacagtgtctactaaagaaaatctcgactgaaccaagggccca 381
Score = 44.1 bits (22), Expect = 0.029
Identities = 70/86 (81%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
||||||||||| || || | |||||||| || ||||| ||||||||||| || | ||
Sbjct: 280 tgcatcttgaatcctgtcaggatatcttctgttacagaaccatatatccagccaacttcc 221
Query: 1321 ttcccccattctgttttatcctcata 1346
|| ||||||||||| ||||| |||||
Sbjct: 220 ttgccccattctgtcttatcttcata 195
>gb|CV275712.1|CV275712 WS0177.B21_F22 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0177_F22 3', mRNA sequence
Length = 419
Score = 46.1 bits (23), Expect = 0.007
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 1102 taaccataccagataggacagtgtctgctaagtagaatttcaactgaaccaagagccca 1160
||||||||||| || ||||||||||| |||| | ||| || ||||||||||| |||||
Sbjct: 199 taaccataccaaattggacagtgtctactaaagaaaatctcgactgaaccaagggccca 257
Score = 36.2 bits (18), Expect = 7.2
Identities = 42/50 (84%)
Strand = Plus / Plus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatcca 1310
||||||||||| || || | |||||||| || ||||| |||||||||||
Sbjct: 358 tgcatcttgaatcctgtcaggatatcttctgttacagaaccatatatcca 407
>gb|BI131891.1|BI131891 G127P18Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 457
Score = 44.1 bits (22), Expect = 0.029
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 1119 acagtgtctgctaagtagaatttcaactgaaccaagagccca 1160
|||||||||||||| | |||||| || ||||||||||||||
Sbjct: 137 acagtgtctgctaaagaaaatttccacagaaccaagagccca 96
>gb|BU866508.1|BU866508 S067E12 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 733
Score = 44.1 bits (22), Expect = 0.029
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 843 ccaaaactgctcatttctccaccaatcctc 872
||||||||||||||| |||||||| |||||
Sbjct: 162 ccaaaactgctcattcctccaccactcctc 133
>gb|BU870116.1|BU870116 Q008I09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 265
Score = 44.1 bits (22), Expect = 0.029
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 431 tgaaggggtcgatcttcacccacagcagcgagaatatggaagcaag 476
||||||||||||| ||||||||||| ||||| |||||||||||
Sbjct: 128 tgaaggggtcgatgcgcacccacagcaaggagaaaatggaagcaag 83
>gb|CF229941.1|CF229941 PtaC0001G4G0414 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 528
Score = 44.1 bits (22), Expect = 0.029
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 431 tgaaggggtcgatcttcacccacagcagcgagaatatggaagcaag 476
||||||||||||| ||||||||||| ||||| |||||||||||
Sbjct: 47 tgaaggggtcgatgcgcacccacagcaaggagaaaatggaagcaag 2
>gb|CF236447.1|CF236447 PtaJXT2H2H0216 Poplar cDNA library from young tension xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 637
Score = 44.1 bits (22), Expect = 0.029
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 2304 tgtcctttaggtaatctatctttcgagcaaagtaaaactctggagc 2349
||||||| || ||||| ||||| |||||||||||||||| |||||
Sbjct: 635 tgtccttgagataatcgatcttcagagcaaagtaaaactcaggagc 590
>gb|CK111062.1|CK111062 Q008E05 Populus dormant bud cDNA library Populus tremula cDNA clone
Q008E05 5', mRNA sequence
Length = 313
Score = 44.1 bits (22), Expect = 0.029
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 431 tgaaggggtcgatcttcacccacagcagcgagaatatggaagcaag 476
||||||||||||| ||||||||||| ||||| |||||||||||
Sbjct: 140 tgaaggggtcgatgcgcacccacagcaaggagaaaatggaagcaag 95
>gb|CV234217.1|CV234217 WS01214.B21_B13 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01214_B13 3', mRNA sequence
Length = 654
Score = 44.1 bits (22), Expect = 0.029
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 532 cccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaat 591
||||| ||||| ||||||||||||| ||| ||||| | || || |||||| |||| ||
Sbjct: 513 cccttgaggaatgggtagaggtggatgatgacccacaaggcgaaaaacagcctcccaaac 572
Query: 592 agtggaccccatga 605
| ||||||||||||
Sbjct: 573 aatggaccccatga 586
>gb|CV235270.1|CV235270 WS01218.B21_H07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01218_H07 3', mRNA sequence
Length = 695
Score = 44.1 bits (22), Expect = 0.029
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 532 cccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaat 591
||||| ||||| ||||||||||||| ||| ||||| | || || |||||| |||| ||
Sbjct: 478 cccttgaggaatgggtagaggtggatgatgacccacaaggcgaaaaacagcctcccaaac 537
Query: 592 agtggaccccatga 605
| ||||||||||||
Sbjct: 538 aatggaccccatga 551
>gb|CV238245.1|CV238245 WS0125.B21_N16 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0125_N16 3', mRNA sequence
Length = 687
Score = 44.1 bits (22), Expect = 0.029
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 532 cccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaat 591
||||| ||||| ||||||||||||| ||| ||||| | || || |||||| |||| ||
Sbjct: 478 cccttgaggaatgggtagaggtggatgatgacccacaaggcgaaaaacagcctcccaaac 537
Query: 592 agtggaccccatga 605
| ||||||||||||
Sbjct: 538 aatggaccccatga 551
>gb|CV238311.1|CV238311 WS0126.B21_C03 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0126_C03 3', mRNA sequence
Length = 619
Score = 44.1 bits (22), Expect = 0.029
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 532 cccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaat 591
||||| ||||| ||||||||||||| ||| ||||| | || || |||||| |||| ||
Sbjct: 478 cccttgaggaatgggtagaggtggatgatgacccacaaggcgaaaaacagcctcccaaac 537
Query: 592 agtggaccccatga 605
| ||||||||||||
Sbjct: 538 aatggaccccatga 551
>gb|DT507297.1|DT507297 WS02417.BR_O04 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02417_O04 5', mRNA sequence
Length = 571
Score = 44.1 bits (22), Expect = 0.029
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 532 cccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaat 591
||||| ||||| ||||||||||||| ||| ||||| | || || |||||| |||| ||
Sbjct: 111 cccttgaggaatgggtagaggtggatgatgacccacaaggcgaaaaacagcctcccaaac 52
Query: 592 agtggaccccatga 605
| ||||||||||||
Sbjct: 51 aatggaccccatga 38
>gb|DT523570.1|DT523570 WS02040.B21_A19 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02040_A19 3', mRNA sequence
Length = 633
Score = 44.1 bits (22), Expect = 0.029
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 431 tgaaggggtcgatcttcacccacagcagcgagaatatggaagcaag 476
||||||||||||| |||||| |||| |||||||||||||||||
Sbjct: 489 tgaaggggtcgatgcgcacccatagcaaggagaatatggaagcaag 534
>gb|CF228296.1|CF228296 PtaXM0011D10D1008 Poplar cDNA library from mature xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 460
Score = 42.1 bits (21), Expect = 0.12
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 538 aggaaagggtagaggtggaggatcaccca 566
||||| ||||||||||||||||| |||||
Sbjct: 96 aggaaggggtagaggtggaggatgaccca 68
>gb|CV273266.1|CV273266 WS01710.B21_E12 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS01710_E12 3', mRNA sequence
Length = 591
Score = 42.1 bits (21), Expect = 0.12
Identities = 81/101 (80%)
Strand = Plus / Plus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactg 618
|||||||||| ||||||||| ||||| || || || || |||||||| | || ||| |
Sbjct: 356 atcacccagaatgcaaagaaaagcttgccaaacagaggcccccatgactcatacccatta 415
Query: 619 ttgatagcatacgacactccagccactataccaaccaggtt 659
|| ||||||| ||| || |||||||| | |||||||||||
Sbjct: 416 tttatagcattcgagacaccagccacgactccaaccaggtt 456
>gb|CV275252.1|CV275252 WS0175.B21_N18 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0175_N18 3', mRNA sequence
Length = 591
Score = 42.1 bits (21), Expect = 0.12
Identities = 81/101 (80%)
Strand = Plus / Plus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactg 618
|||||||||| ||||||||| ||||| || || || || |||||||| | || ||| |
Sbjct: 356 atcacccagaatgcaaagaaaagcttgccaaacagaggcccccatgactcatacccatta 415
Query: 619 ttgatagcatacgacactccagccactataccaaccaggtt 659
|| ||||||| ||| || |||||||| | |||||||||||
Sbjct: 416 tttatagcattcgagacaccagccacgactccaaccaggtt 456
>gb|BP931353.1|BP931353 BP931353 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-022_F10.r 3', mRNA sequence
Length = 677
Score = 42.1 bits (21), Expect = 0.12
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 538 aggaaagggtagaggtggaggatcaccca 566
||||| ||||||||||||||||| |||||
Sbjct: 373 aggaaggggtagaggtggaggatgaccca 401
>gb|BP935110.1|BP935110 BP935110 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-073_N03.r 3', mRNA sequence
Length = 567
Score = 42.1 bits (21), Expect = 0.12
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 538 aggaaagggtagaggtggaggatcaccca 566
||||| ||||||||||||||||| |||||
Sbjct: 374 aggaaggggtagaggtggaggatgaccca 402
>gb|DN487448.1|DN487448 Q027C07.3pR Populus dormant bud cDNA library Populus tremula cDNA
clone Q027C07 3', mRNA sequence
Length = 356
Score = 42.1 bits (21), Expect = 0.12
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 2042 ggcctcttttcacgagaaacataaacaag 2070
|||||||| ||||||||||| ||||||||
Sbjct: 52 ggcctcttctcacgagaaacgtaaacaag 80
>gb|AY162183.1| Populus tremuloides cellulose synthase-like protein D3 (CSLD3) gene,
partial cds
Length = 572
Score = 42.1 bits (21), Expect = 0.12
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1835 ccatcaaatctttgtggaaactgaacata 1863
||||| || ||||||||||||||||||||
Sbjct: 32 ccatcgaacctttgtggaaactgaacata 4
>gb|AI164546.1|AI164546 A064p24u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 416
Score = 40.1 bits (20), Expect = 0.46
Identities = 68/84 (80%)
Strand = Plus / Minus
Query: 523 cccatgagacccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagc 582
||||| ||||| || |||||||| ||||| |||| || ||||||| || || || |||
Sbjct: 304 cccatcagacctttgaggaaaggatagagatggacaatgacccagaaagcgaaaaatagc 245
Query: 583 ttcccgaatagtggaccccatgat 606
||||| |||| ||||||||||||
Sbjct: 244 ttcccaaataaaggaccccatgat 221
>gb|BI128229.1|BI128229 G072P90Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 440
Score = 40.1 bits (20), Expect = 0.46
Identities = 68/84 (80%)
Strand = Plus / Minus
Query: 523 cccatgagacccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagc 582
||||| ||||| || |||||||| ||||| |||| || ||||||| || || || |||
Sbjct: 92 cccatcagacctttgaggaaaggatagagatggacaatgacccagaaagcgaaaaatagc 33
Query: 583 ttcccgaatagtggaccccatgat 606
||||| |||| ||||||||||||
Sbjct: 32 ttcccaaataaaggaccccatgat 9
>gb|BI128887.1|BI128887 G083P04Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 484
Score = 40.1 bits (20), Expect = 0.46
Identities = 71/88 (80%)
Strand = Plus / Minus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
|||| |||| ||| |||| |||||| |||||||| || ||||| || || | || |||||
Sbjct: 363 catcttcggctgcttttgctgtgacagtgaagttcgtatcgatgccagccaacattttta 304
Query: 794 agagaccttggaacacagcaaagagatg 821
||| || ||||| || |||||||||||
Sbjct: 303 agaatccctggaagaccgcaaagagatg 276
>gb|BU815407.1|BU815407 N041C05 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 675
Score = 40.1 bits (20), Expect = 0.46
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 697 gtccacttgaacacatacagctcagcaaaatcaccatcatcatc 740
||||| ||||||| ||| ||||| | |||||||||||| |||||
Sbjct: 50 gtccatttgaacatatatagctcggtaaaatcaccatcttcatc 7
>gb|BU894855.1|BU894855 X016A07 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 505
Score = 40.1 bits (20), Expect = 0.46
Identities = 68/84 (80%)
Strand = Plus / Minus
Query: 523 cccatgagacccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagc 582
||||| ||||| || |||||||| ||||| |||| || ||||||| || || || |||
Sbjct: 335 cccatcagacctttgaggaaaggatagagatggacaatgacccagaaagcgaaaaatagc 276
Query: 583 ttcccgaatagtggaccccatgat 606
||||| |||| ||||||||||||
Sbjct: 275 ttcccaaataaaggaccccatgat 252
Score = 36.2 bits (18), Expect = 7.2
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 800 cttggaacacagcaaagagatg 821
|||||||||||||||| |||||
Sbjct: 63 cttggaacacagcaaaaagatg 42
>gb|BU894931.1|BU894931 X017A07 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 550
Score = 40.1 bits (20), Expect = 0.46
Identities = 68/84 (80%)
Strand = Plus / Minus
Query: 523 cccatgagacccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagc 582
||||| ||||| || |||||||| ||||| |||| || ||||||| || || || |||
Sbjct: 208 cccatcagacctttgaggaaaggatagagatggacaatgacccagaaagcgaaaaatagc 149
Query: 583 ttcccgaatagtggaccccatgat 606
||||| |||| ||||||||||||
Sbjct: 148 ttcccaaataaaggaccccatgat 125
>gb|CF228576.1|CF228576 PtaXM0014G2G0214 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 683
Score = 40.1 bits (20), Expect = 0.46
Identities = 71/88 (80%)
Strand = Plus / Minus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
|||| |||| ||| |||| |||||| |||||||| || ||||| || || | || |||||
Sbjct: 91 catcttcggctgcttttgctgtgacagtgaagttcgtatcgatgccagccaacattttta 32
Query: 794 agagaccttggaacacagcaaagagatg 821
||| || ||||| || |||||||||||
Sbjct: 31 agaatccctggaagaccgcaaagagatg 4
>gb|CF232524.1|CF232524 PtaJXO0011E3E0309 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 620
Score = 40.1 bits (20), Expect = 0.46
Identities = 68/84 (80%)
Strand = Plus / Minus
Query: 523 cccatgagacccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagc 582
||||| ||||| || |||||||| ||||| |||| || ||||||| || || || |||
Sbjct: 124 cccatcagacctttgaggaaaggatagagatggacaatgacccagaaagcgaaaaatagc 65
Query: 583 ttcccgaatagtggaccccatgat 606
||||| |||| ||||||||||||
Sbjct: 64 ttcccaaataaaggaccccatgat 41
>gb|CF232848.1|CF232848 PtaJXO0016E6E0610 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 764
Score = 40.1 bits (20), Expect = 0.46
Identities = 71/88 (80%)
Strand = Plus / Minus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
|||| |||| ||| |||| |||||| |||||||| || ||||| || || | || |||||
Sbjct: 280 catcttcggctgcttttgctgtgacagtgaagttcgtatcgatgccagccaacattttta 221
Query: 794 agagaccttggaacacagcaaagagatg 821
||| || ||||| || |||||||||||
Sbjct: 220 agaatccctggaagaccgcaaagagatg 193
>gb|CF235304.1|CF235304 PtaJXT0021C1C0105 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 744
Score = 40.1 bits (20), Expect = 0.46
Identities = 68/84 (80%)
Strand = Plus / Minus
Query: 523 cccatgagacccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagc 582
||||| ||||| || |||||||| ||||| |||| || ||||||| || || || |||
Sbjct: 400 cccatcagacctttgaggaaaggatagagatggacaatgacccagaaagcgaaaaatagc 341
Query: 583 ttcccgaatagtggaccccatgat 606
||||| |||| ||||||||||||
Sbjct: 340 ttcccaaataaaggaccccatgat 317
>gb|CF235953.1|CF235953 PtaJXT0028H7H0715 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 720
Score = 40.1 bits (20), Expect = 0.46
Identities = 56/68 (82%)
Strand = Plus / Minus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
||||| |||||| |||||||||| ||||| | ||||| || ||| |||| || | ||||
Sbjct: 259 aggaaggggtaggggtggaggatgacccatagggcaaaaaatagcctcccaaacaatgga 200
Query: 598 ccccatga 605
||||||||
Sbjct: 199 ccccatga 192
>gb|CK088642.1|CK088642 A064P24.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A064P24 3', mRNA sequence
Length = 673
Score = 40.1 bits (20), Expect = 0.46
Identities = 68/84 (80%)
Strand = Plus / Plus
Query: 523 cccatgagacccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagc 582
||||| ||||| || |||||||| ||||| |||| || ||||||| || || || |||
Sbjct: 369 cccatcagacctttgaggaaaggatagagatggacaatgacccagaaagcgaaaaatagc 428
Query: 583 ttcccgaatagtggaccccatgat 606
||||| |||| ||||||||||||
Sbjct: 429 ttcccaaataaaggaccccatgat 452
>gb|CK092990.1|CK092990 G103P13.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G103P13 3', mRNA sequence
Length = 724
Score = 40.1 bits (20), Expect = 0.46
Identities = 71/88 (80%)
Strand = Plus / Minus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
|||| |||| ||| |||| |||||| |||||||| || ||||| || || | || |||||
Sbjct: 373 catcttcggctgcttttgctgtgacagtgaagttcgtatcgatgccagccaacattttta 314
Query: 794 agagaccttggaacacagcaaagagatg 821
||| || ||||| || |||||||||||
Sbjct: 313 agaatccctggaagaccgcaaagagatg 286
>gb|CK093129.1|CK093129 G109P08.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G109P08 3', mRNA sequence
Length = 783
Score = 40.1 bits (20), Expect = 0.46
Identities = 68/84 (80%)
Strand = Plus / Plus
Query: 523 cccatgagacccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagc 582
||||| ||||| || |||||||| ||||| |||| || ||||||| || || || |||
Sbjct: 372 cccatcagacctttgaggaaaggatagagatggacaatgacccagaaagcgaaaaatagc 431
Query: 583 ttcccgaatagtggaccccatgat 606
||||| |||| ||||||||||||
Sbjct: 432 ttcccaaataaaggaccccatgat 455
>gb|CK102126.1|CK102126 G065P23.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G065P23 5', mRNA sequence
Length = 313
Score = 40.1 bits (20), Expect = 0.46
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 835 ccaatgacccaaaactgctcatttctccacca 866
||||| |||||||| || ||||||||||||||
Sbjct: 71 ccaatcacccaaaattgttcatttctccacca 40
>gb|CK102947.1|CK102947 G097P01.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G097P01 5', mRNA sequence
Length = 424
Score = 40.1 bits (20), Expect = 0.46
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 1751 ggtccttgaatgccatctagacccttcatattaatatcaaagaa 1794
||||||||||||||||| | || ||||| |||| |||||||||
Sbjct: 213 ggtccttgaatgccatccaaccctttcatgttaacatcaaagaa 170
>gb|CN549469.1|CN549469 GQ0241.B3_B20 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0241_B20 5', mRNA sequence
Length = 839
Score = 40.1 bits (20), Expect = 0.46
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 841 acccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatc 892
||||| ||||| ||||| | |||| |||| ||||||| |||||||||||||
Sbjct: 92 acccagaactgttcattacgccacaaatcttcaatgctgacaccactccatc 41
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctc 719
|||||||| ||||||||||||| || ||| |||||
Sbjct: 245 atcagaagtgttgtccacttgaccatatagagctc 211
>gb|CV226017.1|CV226017 WS0163.B21_A20 PT-DX-A-7 Populus trichocarpa cDNA clone WS0163_A20
3', mRNA sequence
Length = 807
Score = 40.1 bits (20), Expect = 0.46
Identities = 83/104 (79%)
Strand = Plus / Plus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| |||||||| ||||| || ||| || || || |||||||| ||||||||
Sbjct: 643 ccttggaagacagcaaaaagatgagctgagacaccgccgataacccaaaattgctcatta 702
Query: 859 ctccaccaatcctcaatgccaacaccactccatcgaagctccaa 902
| |||| | |||| |||| || |||||||||||||| |||||
Sbjct: 703 cgccacaagtcctggatgctgactccactccatcgaagttccaa 746
>gb|CV268970.1|CV268970 WS0206.B21_P09 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0206_P09 3', mRNA sequence
Length = 756
Score = 40.1 bits (20), Expect = 0.46
Identities = 68/84 (80%)
Strand = Plus / Minus
Query: 523 cccatgagacccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagc 582
||||| ||||| || |||||||| ||||| |||| || ||||||| || || || |||
Sbjct: 701 cccatcagacctttgaggaaaggatagagatggacaatgacccagaaagcgaaaaatagc 642
Query: 583 ttcccgaatagtggaccccatgat 606
||||| |||| ||||||||||||
Sbjct: 641 ttcccaaataaaggaccccatgat 618
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1048 taaacaatggtgttgatgtatgccagtctctccag 1082
||||| |||||||||||||| || || ||||||||
Sbjct: 179 taaacgatggtgttgatgtaagcaagcctctccag 145
Score = 36.2 bits (18), Expect = 7.2
Identities = 78/98 (79%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| |||||||| ||||| || ||| || || || |||||||| ||||||||
Sbjct: 428 ccttggaagacagcaaaaagatgagctgagacaccgccgataacccaaaattgctcatta 369
Query: 859 ctccaccaatcctcaatgccaacaccactccatcgaag 896
| |||| | |||| |||| || ||||||||||||||
Sbjct: 368 cgccacaagtcctggatgctgactccactccatcgaag 331
>gb|CV272431.1|CV272431 WS0157.B21_K08 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0157_K08 3', mRNA sequence
Length = 689
Score = 40.1 bits (20), Expect = 0.46
Identities = 68/84 (80%)
Strand = Plus / Plus
Query: 523 cccatgagacccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagc 582
||||| ||||| || |||||||| ||||| |||| || ||||||| || || || |||
Sbjct: 369 cccatcagacctttgaggaaaggatagagatggacaatgacccagaaagcgaaaaatagc 428
Query: 583 ttcccgaatagtggaccccatgat 606
||||| |||| ||||||||||||
Sbjct: 429 ttcccaaataacggaccccatgat 452
>gb|DN493622.1|DN493622 G071P10.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G071P10 5', mRNA sequence
Length = 682
Score = 40.1 bits (20), Expect = 0.46
Identities = 71/88 (80%)
Strand = Plus / Minus
Query: 734 catcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcactttta 793
|||| |||| ||| |||| |||||| |||||||| || ||||| || || | || |||||
Sbjct: 459 catcttcggctgcttttgctgtgacagtgaagttcgtatcgatgccagccaacattttta 400
Query: 794 agagaccttggaacacagcaaagagatg 821
||| || ||||| || |||||||||||
Sbjct: 399 agaatccctggaagaccgcaaagagatg 372
>gb|DN495393.1|DN495393 N041C05.5pR Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA clone N041C05 5', mRNA sequence
Length = 544
Score = 40.1 bits (20), Expect = 0.46
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 697 gtccacttgaacacatacagctcagcaaaatcaccatcatcatc 740
||||| ||||||| ||| ||||| | |||||||||||| |||||
Sbjct: 58 gtccatttgaacatatatagctcggtaaaatcaccatcttcatc 15
>gb|AI161715.1|AI161715 A005P67U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 425
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1048 taaacaatggtgttgatgtatgccagtctctccag 1082
||||| |||||||||||||| || || ||||||||
Sbjct: 167 taaacgatggtgttgatgtaagcaagcctctccag 133
>gb|AI162413.1|AI162413 A017P22U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 567
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1048 taaacaatggtgttgatgtatgccagtctctccag 1082
||||| |||||||||||||| || || ||||||||
Sbjct: 134 taaacgatggtgttgatgtaagcaagcctctccag 100
Score = 36.2 bits (18), Expect = 7.2
Identities = 51/62 (82%)
Strand = Plus / Minus
Query: 841 acccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcgaagctcc 900
|||||||| |||||||| | |||| | |||| |||| || |||||||||||||| |||
Sbjct: 341 acccaaaattgctcattacgccacaagtcctggatgctgactccactccatcgaagttcc 282
Query: 901 aa 902
||
Sbjct: 281 aa 280
>gb|AI166149.1|AI166149 B00927U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 334
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1048 taaacaatggtgttgatgtatgccagtctctccag 1082
||||| |||||||||||||| || || ||||||||
Sbjct: 130 taaacgatggtgttgatgtaagcaagcctctccag 96
>gb|BI131900.1|BI131900 G127P28Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 476
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1048 taaacaatggtgttgatgtatgccagtctctccag 1082
||||| |||||||||||||| || || ||||||||
Sbjct: 131 taaacgatggtgttgatgtaagcaagcctctccag 97
Score = 36.2 bits (18), Expect = 7.2
Identities = 51/62 (82%)
Strand = Plus / Minus
Query: 841 acccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcgaagctcc 900
|||||||| |||||||| | |||| | |||| |||| || |||||||||||||| |||
Sbjct: 338 acccaaaattgctcattacgccacaagtcctggatgctgactccactccatcgaagttcc 279
Query: 901 aa 902
||
Sbjct: 278 aa 277
>gb|BI132304.1|BI132304 G135P11Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 429
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1048 taaacaatggtgttgatgtatgccagtctctccag 1082
||||| |||||||||||||| || || ||||||||
Sbjct: 235 taaacgatggtgttgatgtaagcaagcctctccag 201
>gb|BU894361.1|BU894361 X008A10 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 525
Score = 38.2 bits (19), Expect = 1.8
Identities = 67/83 (80%)
Strand = Plus / Minus
Query: 523 cccatgagacccttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagc 582
||||| ||||| || |||||||| ||||| |||| || ||||||| || || || |||
Sbjct: 171 cccatcagacctttgaggaaaggatagagatggacaatgacccagaaagcgaaaaatagc 112
Query: 583 ttcccgaatagtggaccccatga 605
||||| |||| |||||||||||
Sbjct: 111 ttcccaaataaaggaccccatga 89
>gb|BU896705.1|BU896705 X044E08 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 718
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1048 taaacaatggtgttgatgtatgccagtctctccag 1082
||||| |||||||||||||| || || ||||||||
Sbjct: 252 taaacgatggtgttgatgtaagcaagcctctccag 218
Score = 36.2 bits (18), Expect = 7.2
Identities = 51/62 (82%)
Strand = Plus / Minus
Query: 841 acccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcgaagctcc 900
|||||||| |||||||| | |||| | |||| |||| || |||||||||||||| |||
Sbjct: 459 acccaaaattgctcattacgccacaagtcctggatgctgactccactccatcgaagttcc 400
Query: 901 aa 902
||
Sbjct: 399 aa 398
>gb|CF216242.1|CF216242 PT1060 Hybrid aspen xylem up-regulated Populus alba x Populus tremula
cDNA clone PT1060, mRNA sequence
Length = 216
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 1048 taaacaatggtgttgatgtatgccagtctctccag 1082
||||| |||||||||||||| || || ||||||||
Sbjct: 70 taaacgatggtgttgatgtaagcaagcctctccag 104
>gb|CF216282.1|CF216282 PT1104 Hybrid aspen xylem up-regulated Populus alba x Populus
tremula cDNA clone PT1104, mRNA sequence
Length = 192
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 685 atcagaagagttgtccacttgaacacatacagctc 719
|||||||| ||||||||||||| || ||| |||||
Sbjct: 150 atcagaagtgttgtccacttgaccatatagagctc 184
>gb|CF216327.1|CF216327 PT1158 Hybrid aspen xylem up-regulated Populus alba x Populus tremula
cDNA clone PT1158, mRNA sequence
Length = 216
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 1048 taaacaatggtgttgatgtatgccagtctctccag 1082
||||| |||||||||||||| || || ||||||||
Sbjct: 70 taaacgatggtgttgatgtaagcaagcctctccag 104
>gb|CF228734.1|CF228734 PtaXM0016G4G0414 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 747
Score = 38.2 bits (19), Expect = 1.8
Identities = 67/83 (80%)
Strand = Plus / Minus
Query: 739 tcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagaga 798
|||| ||| |||| |||||| |||||||| || ||||| || || | || ||||||||
Sbjct: 316 tcggctgcttttgctgtgacagtgaagttcgtatcgatgccagccaacatttttaagaat 257
Query: 799 ccttggaacacagcaaagagatg 821
|| ||||| || |||||||||||
Sbjct: 256 ccctggaagaccgcaaagagatg 234
>gb|CF229187.1|CF229187 PtaXM0022D10D1008 Poplar cDNA library from mature xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 727
Score = 38.2 bits (19), Expect = 1.8
Identities = 67/83 (80%)
Strand = Plus / Minus
Query: 739 tcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagaga 798
|||| ||| |||| |||||| |||||||| || ||||| || || | || ||||||||
Sbjct: 318 tcggctgcttttgctgtgacagtgaagttcgtatcgatgccagccaacatttttaagaat 259
Query: 799 ccttggaacacagcaaagagatg 821
|| ||||| || |||||||||||
Sbjct: 258 ccctggaagaccgcaaagagatg 236
>gb|CF229740.1|CF229740 PtaXM0029A6A0602 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 759
Score = 38.2 bits (19), Expect = 1.8
Identities = 78/98 (79%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| |||||||| ||||| || ||| || || | ||||||||| ||||||||
Sbjct: 334 ccttggaagacagcaaaaagatgagctgagacaccgccgangacccaaaattgctcatta 275
Query: 859 ctccaccaatcctcaatgccaacaccactccatcgaag 896
| |||| | |||| |||| || ||||||||||||||
Sbjct: 274 cgccacaagtcctggatgctgactccactccatcgaag 237
>gb|CF235000.1|CF235000 PtaJXT0017F7F0711 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 770
Score = 38.2 bits (19), Expect = 1.8
Identities = 67/83 (80%)
Strand = Plus / Minus
Query: 739 tcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagaga 798
|||| ||| |||| |||||| |||||||| || ||||| || || | || ||||||||
Sbjct: 299 tcggctgcttttgctgtgacagtgaagttcgtatcgatgccagccaacatttttaagaat 240
Query: 799 ccttggaacacagcaaagagatg 821
|| ||||| || |||||||||||
Sbjct: 239 ccctggaagaccgcaaagagatg 217
>gb|CF236377.1|CF236377 PtaJXT2B10B1004 Poplar cDNA library from young tension xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 651
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1048 taaacaatggtgttgatgtatgccagtctctccag 1082
||||| |||||||||||||| || || ||||||||
Sbjct: 168 taaacgatggtgttgatgtaagcaagcctctccag 134
>gb|CK094303.1|CK094303 I023P39.3pR Populus senescing leaves cDNA library Populus tremula
cDNA clone I023P39 3', mRNA sequence
Length = 648
Score = 38.2 bits (19), Expect = 1.8
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1750 aggtccttgaatgccatct 1768
|||||||||||||||||||
Sbjct: 207 aggtccttgaatgccatct 189
>gb|CK098592.1|CK098592 A020P56.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A020P56 5', mRNA sequence
Length = 279
Score = 38.2 bits (19), Expect = 1.8
Identities = 58/71 (81%)
Strand = Plus / Minus
Query: 1729 gcatcctgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatc 1788
|||||| || || ||||| | ||| ||||| |||||||| | || |||||||| |||||
Sbjct: 198 gcatccagtaccaacatatataggaccttgtatgccatccaatcctttcatattgatatc 139
Query: 1789 aaagaagacaa 1799
|||||| ||||
Sbjct: 138 aaagaatacaa 128
>gb|CK104266.1|CK104266 I023P39.5pR Populus senescing leaves cDNA library Populus tremula
cDNA clone I023P39 5', mRNA sequence
Length = 694
Score = 38.2 bits (19), Expect = 1.8
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1750 aggtccttgaatgccatct 1768
|||||||||||||||||||
Sbjct: 514 aggtccttgaatgccatct 532
>gb|CK116304.1|CK116304 B009P27 Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B009P27 5', mRNA sequence
Length = 334
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1048 taaacaatggtgttgatgtatgccagtctctccag 1082
||||| |||||||||||||| || || ||||||||
Sbjct: 130 taaacgatggtgttgatgtaagcaagcctctccag 96
>gb|CN524680.1|CN524680 GQ015M13.T3_D10 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M13_D10 5', mRNA sequence
Length = 796
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1048 taaacaatggtgttgatgtatgccagtctctccag 1082
||||| |||||||||||||| || || ||||||||
Sbjct: 127 taaacgatggtgttgatgtaagcaagcctctccag 93
Score = 36.2 bits (18), Expect = 7.2
Identities = 78/98 (79%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| |||||||| ||||| || ||| || || || |||||||| ||||||||
Sbjct: 376 ccttggaagacagcaaaaagatgagctgagacaccgccgataacccaaaattgctcatta 317
Query: 859 ctccaccaatcctcaatgccaacaccactccatcgaag 896
| |||| | |||| |||| || ||||||||||||||
Sbjct: 316 cgccacaagtcctggatgctgactccactccatcgaag 279
>gb|CK319336.1|CK319336 X9P09f03 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 350
Score = 38.2 bits (19), Expect = 1.8
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 1048 taaacaatggtgttgatgtatgccagtctctccag 1082
||||| |||||||||||||| || || ||||||||
Sbjct: 209 taaacgatggtgttgatgtaagcaagcctctccag 175
>gb|CX180372.1|CX180372 G06_45-102_14.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 645
Score = 38.2 bits (19), Expect = 1.8
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1284 atcttcagtaacagagccatatatcca 1310
||||||||||||||| ||||| |||||
Sbjct: 353 atcttcagtaacagatccataaatcca 327
>gb|CX180715.1|CX180715 G05_45-68_13.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 682
Score = 38.2 bits (19), Expect = 1.8
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 1284 atcttcagtaacagagccatatatcca 1310
||||||||||||||| ||||| |||||
Sbjct: 301 atcttcagtaacagatccataaatcca 275
>gb|BI128528.1|BI128528 G077P53Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 382
Score = 36.2 bits (18), Expect = 7.2
Identities = 78/98 (79%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| |||||||| ||||| || ||| || || || |||||||| ||||||||
Sbjct: 182 ccttggaagacagcaaaaagatgagctgagacaccgccgataacccaaaattgctcatta 123
Query: 859 ctccaccaatcctcaatgccaacaccactccatcgaag 896
| |||| | |||| |||| || ||||||||||||||
Sbjct: 122 cgccacaagtcctggatgctgactccactccatcgaag 85
>gb|BI132326.1|BI132326 G135P19Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 479
Score = 36.2 bits (18), Expect = 7.2
Identities = 51/62 (82%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
||||||||||| ||| |||| ||||| ||||| || || ||||| | ||| || ||||||
Sbjct: 66 tgcatcttgaagccacttaagatatcctcagtgactgacccatagacccaaccaatctct 7
Query: 1321 tt 1322
||
Sbjct: 6 tt 5
>gb|CA926925.1|CA926925 MTU6CR.P2.H01 Aspen root cDNA Library Populus tremuloides cDNA, mRNA
sequence
Length = 396
Score = 36.2 bits (18), Expect = 7.2
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1264 atcttgaaaccagttaaa 1281
||||||||||||||||||
Sbjct: 57 atcttgaaaccagttaaa 40
>gb|CF229383.1|CF229383 PtaXM0024G4G0414 Poplar cDNA library from mature xylem Populus alba x
Populus tremula cDNA 5', mRNA sequence
Length = 747
Score = 36.2 bits (18), Expect = 7.2
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1309 catccgatctctttcccc 1326
||||||||||||||||||
Sbjct: 45 catccgatctctttcccc 62
>gb|CF234499.1|CF234499 Ptajxojxo3E2E0210 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 702
Score = 36.2 bits (18), Expect = 7.2
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1309 catccgatctctttcccc 1326
||||||||||||||||||
Sbjct: 30 catccgatctctttcccc 47
>gb|CF237106.1|CF237106 Ptajxtjxt2B1B0103 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 663
Score = 36.2 bits (18), Expect = 7.2
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 1102 taaccataccagataggacagtgtct 1127
||||||||||| || |||||||||||
Sbjct: 454 taaccataccaaattggacagtgtct 429
Score = 36.2 bits (18), Expect = 7.2
Identities = 69/86 (80%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
||||||||||| || || | |||||||| || ||||| ||||| ||||| || | ||
Sbjct: 295 tgcatcttgaatcctgtcaggatatcttctgttacagaaccataaatccagccaacttcc 236
Query: 1321 ttcccccattctgttttatcctcata 1346
|| ||||||||||| ||||| |||||
Sbjct: 235 ttgccccattctgtcttatcttcata 210
>gb|CK116718.1|CK116718 B016P26 Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B016P26 5', mRNA sequence
Length = 496
Score = 36.2 bits (18), Expect = 7.2
Identities = 69/86 (80%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
||||||||||| || || | |||||||| || ||||| ||||| ||||| || | ||
Sbjct: 236 tgcatcttgaatcctgtcaggatatcttctgttacagaaccataaatccagccaacttcc 177
Query: 1321 ttcccccattctgttttatcctcata 1346
|| ||||||||||| ||||| |||||
Sbjct: 176 ttgccccattctgtcttatcttcata 151
>gb|CK117433.1|CK117433 B050P94 Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B050P94 5', mRNA sequence
Length = 274
Score = 36.2 bits (18), Expect = 7.2
Identities = 78/98 (79%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| |||||||| ||||| || ||| || || || |||||||| ||||||||
Sbjct: 263 ccttggaagacagcaaaaagatgagctgagcccccgccgataacccaaaattgctcatta 204
Query: 859 ctccaccaatcctcaatgccaacaccactccatcgaag 896
| |||| | |||| |||| || ||||||||||||||
Sbjct: 203 cgccacaagtcctggatgctgactccactccatcgaag 166
>gb|CN518195.1|CN518195 GQ0092.B3_P04 GQ009 Populus trichocarpa x Populus deltoides cDNA
clone GQ0092_P04 5', mRNA sequence
Length = 491
Score = 36.2 bits (18), Expect = 7.2
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1697 tcatagccatacaaggcc 1714
||||||||||||||||||
Sbjct: 65 tcatagccatacaaggcc 48
>gb|CN524029.1|CN524029 GQ015M07.T3_H06 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M07_H06 5', mRNA sequence
Length = 758
Score = 36.2 bits (18), Expect = 7.2
Identities = 78/98 (79%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| |||||||| ||||| || ||| || || || |||||||| ||||||||
Sbjct: 236 ccttggaagacagcaaaaagatgagctgagacaccgccgataacccaaaattgctcatta 177
Query: 859 ctccaccaatcctcaatgccaacaccactccatcgaag 896
| |||| | |||| |||| || ||||||||||||||
Sbjct: 176 cgccacaagtcctggatgctgactccactccatcgaag 139
>gb|CV225435.1|CV225435 WS0161.B21_G07 PT-DX-A-7 Populus trichocarpa cDNA clone WS0161_G07
3', mRNA sequence
Length = 764
Score = 36.2 bits (18), Expect = 7.2
Identities = 78/98 (79%)
Strand = Plus / Plus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| |||||||| ||||| || ||| || || || |||||||| ||||||||
Sbjct: 641 ccttggaagacagcaaaaagatgagctgagacaccgccgataacccaaaattgctcatta 700
Query: 859 ctccaccaatcctcaatgccaacaccactccatcgaag 896
| |||| | |||| |||| || ||||||||||||||
Sbjct: 701 cgccacaagtcctggatgctgactccactccatcgaag 738
>gb|CV225888.1|CV225888 WS0162.B21_K19 PT-DX-A-7 Populus trichocarpa cDNA clone WS0162_K19
3', mRNA sequence
Length = 883
Score = 36.2 bits (18), Expect = 7.2
Identities = 78/98 (79%)
Strand = Plus / Plus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| |||||||| ||||| || ||| || || || |||||||| ||||||||
Sbjct: 641 ccttggaagacagcaaaaagatgagctgagacaccgccgataacccaaaattgctcatta 700
Query: 859 ctccaccaatcctcaatgccaacaccactccatcgaag 896
| |||| | |||| |||| || ||||||||||||||
Sbjct: 701 cgccacaagtcctggatgctgactccactccatcgaag 738
>gb|CV226195.1|CV226195 WS0163.B21_J02 PT-DX-A-7 Populus trichocarpa cDNA clone WS0163_J02
3', mRNA sequence
Length = 806
Score = 36.2 bits (18), Expect = 7.2
Identities = 78/98 (79%)
Strand = Plus / Plus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| |||||||| ||||| || ||| || || || |||||||| ||||||||
Sbjct: 641 ccttggaagacagcaaaaagatgagctgagacaccgccgataacccaaaattgctcatta 700
Query: 859 ctccaccaatcctcaatgccaacaccactccatcgaag 896
| |||| | |||| |||| || ||||||||||||||
Sbjct: 701 cgccacaagtcctggatgctgactccactccatcgaag 738
>gb|CV227633.1|CV227633 WS0167.B21_M03 PT-DX-A-7 Populus trichocarpa cDNA clone WS0167_M03
3', mRNA sequence
Length = 823
Score = 36.2 bits (18), Expect = 7.2
Identities = 78/98 (79%)
Strand = Plus / Plus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| |||||||| ||||| || ||| || || || |||||||| ||||||||
Sbjct: 630 ccttggaagacagcaaaaagatgagctgagacaccgccgataacccaaaattgctcatta 689
Query: 859 ctccaccaatcctcaatgccaacaccactccatcgaag 896
| |||| | |||| |||| || ||||||||||||||
Sbjct: 690 cgccacaagtcctggatgctgactccactccatcgaag 727
>gb|CV258347.1|CV258347 WS0249.B21_E12 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0249_E12 3', mRNA sequence
Length = 726
Score = 36.2 bits (18), Expect = 7.2
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1264 atcttgaaaccagttaaa 1281
||||||||||||||||||
Sbjct: 113 atcttgaaaccagttaaa 96
>gb|CV272957.1|CV272957 WS0171.B21_D20 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0171_D20 3', mRNA sequence
Length = 568
Score = 36.2 bits (18), Expect = 7.2
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1532 aatccctcttctatatct 1549
||||||||||||||||||
Sbjct: 449 aatccctcttctatatct 466
>gb|DT494684.1|DT494684 WS01119.BR_C11 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS01119_C11
5', mRNA sequence
Length = 355
Score = 36.2 bits (18), Expect = 7.2
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 2276 ctttctttcacaaaagaa 2293
||||||||||||||||||
Sbjct: 66 ctttctttcacaaaagaa 83
>gb|DT506617.1|DT506617 WS02416.BR_A21 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02416_A21 5', mRNA sequence
Length = 344
Score = 36.2 bits (18), Expect = 7.2
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1264 atcttgaaaccagttaaa 1281
||||||||||||||||||
Sbjct: 147 atcttgaaaccagttaaa 164
>gb|DT511285.1|DT511285 WS02416.B21_A21 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02416_A21 3', mRNA sequence
Length = 344
Score = 36.2 bits (18), Expect = 7.2
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 1264 atcttgaaaccagttaaa 1281
||||||||||||||||||
Sbjct: 198 atcttgaaaccagttaaa 181
>gb|DV465864.1|DV465864 MTUNUL1.P44.B06 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 751
Score = 36.2 bits (18), Expect = 7.2
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 723 aaaatcaccatcatcatc 740
||||||||||||||||||
Sbjct: 61 aaaatcaccatcatcatc 78
Database: Populus_nucl_with_EST.fasta
Posted date: May 2, 2006 3:31 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 353,184
Number of Sequences: 369679
Number of extensions: 353184
Number of successful extensions: 95600
Number of sequences better than 10.0: 210
Number of HSP's better than 10.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 94865
Number of HSP's gapped (non-prelim): 688
length of query: 2856
length of database: 203,408,664
effective HSP length: 20
effective length of query: 2836
effective length of database: 196,015,084
effective search space: 555898778224
effective search space used: 555898778224
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)