BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805320.2.1
(955 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV246665.1|CV246665 WS01111.B21_H24 PT-P-FL-A-2 Populus ... 198 3e-049
gb|CV280449.1|CV280449 WS0136.B21_E22 PTxD-IL-FL-A-4 Populu... 198 3e-049
gb|DT520194.1|DT520194 WS02446.B21.1_N20 PTxD-ICC-N-A-14 Po... 198 3e-049
gb|CV276168.1|CV276168 WS0178.B21.1_N22 PTxD-NR-A-8 Populus... 190 7e-047
gb|CX171019.1|CX171019 A09_69-70_01.ab1 leaf inoculated wit... 190 7e-047
gb|CX654403.1|CX654403 PO02004B06 Poplar SC cDNA library Po... 190 7e-047
gb|CX658892.1|CX658892 PO01023F07 Poplar SC cDNA library Po... 190 7e-047
gb|BU825959.1|BU825959 UK115TA10 Populus apical shoot cDNA ... 182 2e-044
gb|BU892491.1|BU892491 P064E07 Populus petioles cDNA librar... 182 2e-044
gb|CA930846.1|CA930846 MTU2TA.P11.A12 Aspen apex cDNA Libra... 182 2e-044
gb|CX656469.1|CX656469 PO01001F02 Poplar SC cDNA library Po... 182 2e-044
gb|CV271446.1|CV271446 WS0154.B21_L16 PTxN-IB-A-6 Populus t... 176 1e-042
gb|AJ776973.1|AJ776973 AJ776973 Populus euphratica root 3-6... 174 4e-042
gb|AI166350.1|AI166350 xylem.est.191 Poplar xylem Lambda ZA... 172 2e-041
gb|BI129095.1|BI129095 G085P83Y Populus cambium cDNA librar... 172 2e-041
gb|CK102644.1|CK102644 G085P83.5pR Populus tension wood cDN... 172 2e-041
gb|CK108364.1|CK108364 GO85P83 Populus tension wood cDNA li... 172 2e-041
gb|CN522906.1|CN522906 GQ0122.B3_D01 GQ012 Populus trichoca... 172 2e-041
gb|CV229549.1|CV229549 WS01913.B21_K10 PT-DX-N-A-10 Populus... 172 2e-041
gb|CV230345.1|CV230345 WS01916.B21_D19 PT-DX-N-A-10 Populus... 172 2e-041
gb|CV230699.1|CV230699 WS0192.B21_F24 PT-DX-N-A-10 Populus ... 172 2e-041
gb|CV232291.1|CV232291 WS0197.B21_C07 PT-DX-N-A-10 Populus ... 172 2e-041
gb|CV235256.1|CV235256 WS01218.B21_G12 PT-GT-FL-A-3 Populus... 172 2e-041
gb|CV237572.1|CV237572 WS0123.B21_E22 PT-GT-FL-A-3 Populus ... 172 2e-041
gb|CV261999.1|CV261999 WS02018.B21_F21 PTxN-IB-N-A-11 Popul... 172 2e-041
gb|CV281093.1|CV281093 WS0138.B21_P23 PTxD-IL-FL-A-4 Populu... 172 2e-041
gb|CX182921.1|CX182921 B02_45-123_04.ab1 leaf inoculated wi... 172 2e-041
gb|DT469240.1|DT469240 WS01917.C21_C24 PT-DX-N-A-10 Populus... 172 2e-041
gb|DT473648.1|DT473648 WS0123.BR_E22 PT-GT-FL-A-3 Populus t... 172 2e-041
gb|DT502293.1|DT502293 WS0132.BR_G14 PTxD-IL-FL-A-4 Populus... 172 2e-041
gb|DT502987.1|DT502987 WS0134.BR_P15 PTxD-IL-FL-A-4 Populus... 172 2e-041
gb|DT504098.1|DT504098 WS0138.BR_P23 PTxD-IL-FL-A-4 Populus... 172 2e-041
gb|DT509039.1|DT509039 WS02422.BR_K05 PTxD-ICC-N-A-14 Popul... 172 2e-041
gb|DT513654.1|DT513654 WS02422.B21_K05 PTxD-ICC-N-A-14 Popu... 172 2e-041
gb|DT526023.1|DT526023 WS02046.C21_O18 PTxN-IB-N-A-11 Popul... 172 2e-041
gb|CF227819.1|CF227819 PtaXM0005A5A0501 Poplar cDNA library... 170 6e-041
gb|BU833586.1|BU833586 T050A07 Populus apical shoot cDNA li... 167 1e-039
gb|CX179083.1|CX179083 F05_45-117_11.ab1 leaf inoculated wi... 159 2e-037
gb|DN483591.1|DN483591 PSO201A08 Populus tomentiglandulosa ... 157 9e-037
gb|BU822094.1|BU822094 UB32BPE09 Populus tremula cambium cD... 155 4e-036
gb|CV252069.1|CV252069 WS0119.B21_E11 PT-P-FL-A-2 Populus t... 151 6e-035
gb|BU868098.1|BU868098 M111B12 Populus flower cDNA library ... 149 2e-034
gb|CV235365.1|CV235365 WS01218.B21_N18 PT-GT-FL-A-3 Populus... 149 2e-034
gb|CV237185.1|CV237185 WS01226.B21_K13 PT-GT-FL-A-3 Populus... 149 2e-034
gb|CV249233.1|CV249233 WS01123.B21_H06 PT-P-FL-A-2 Populus ... 149 2e-034
gb|CV252980.1|CV252980 PX0019.B21.1_L17 PT-X-FL-A-1 Populus... 149 2e-034
gb|DT472589.1|DT472589 WS01226.BR_K13 PT-GT-FL-A-3 Populus ... 149 2e-034
gb|DT493789.1|DT493789 WS01116.BR_H08 PT-P-FL-A-2 Populus t... 149 2e-034
gb|DT496452.1|DT496452 WS01123.BR_H06 PT-P-FL-A-2 Populus t... 149 2e-034
gb|DT500707.1|DT500707 PX0019.BR.1_L17 PT-X-FL-A-1 Populus ... 149 2e-034
gb|BU881257.1|BU881257 UM60TE07 Populus flower cDNA library... 143 1e-032
gb|AJ777327.1|AJ777327 AJ777327 Populus euphratica root 3-6... 143 1e-032
gb|BU873649.1|BU873649 Q057H03 Populus flower cDNA library ... 141 6e-032
gb|BU873747.1|BU873747 Q059D11 Populus flower cDNA library ... 141 6e-032
gb|CN517547.1|CN517547 GQ0094.B3_H19 GQ009 Populus trichoca... 141 6e-032
gb|CV264664.1|CV264664 WS02025.B21_C03 PTxN-IB-N-A-11 Popul... 141 6e-032
gb|DT522417.1|DT522417 WS02036.B21_O19 PTxN-IB-N-A-11 Popul... 141 6e-032
gb|DT523916.1|DT523916 WS02040.B21_P22 PTxN-IB-N-A-11 Popul... 141 6e-032
gb|CB240212.1|CB240212 PopSC00186 Poplar SC cDNA library Po... 139 2e-031
gb|DT522814.1|DT522814 WS02038.B21_A07 PTxN-IB-N-A-11 Popul... 137 9e-031
gb|BU837518.1|BU837518 T102F12 Populus apical shoot cDNA li... 135 3e-030
gb|CA821630.1|CA821630 RSH05D05 two-month-old roots from cl... 135 3e-030
gb|DT475338.1|DT475338 WS0126.BR_N02 PT-GT-FL-A-3 Populus t... 135 3e-030
gb|BI131285.1|BI131285 G118P34Y Populus cambium cDNA librar... 133 1e-029
gb|BU811004.1|BU811004 UL78TG11 Populus leaf cDNA library P... 133 1e-029
gb|BU829231.1|BU829231 K036P92P Populus apical shoot cDNA l... 133 1e-029
gb|BU829875.1|BU829875 T001B07 Populus apical shoot cDNA li... 133 1e-029
gb|BU832613.1|BU832613 T036C02 Populus apical shoot cDNA li... 133 1e-029
gb|BU835008.1|BU835008 T068D08 Populus apical shoot cDNA li... 133 1e-029
gb|BU835823.1|BU835823 T079B04 Populus apical shoot cDNA li... 133 1e-029
gb|BU836209.1|BU836209 T083H07 Populus apical shoot cDNA li... 133 1e-029
gb|BU836446.1|BU836446 T086F09 Populus apical shoot cDNA li... 133 1e-029
gb|BU867037.1|BU867037 S073F02 Populus imbibed seed cDNA li... 133 1e-029
gb|BU867375.1|BU867375 S077D11 Populus imbibed seed cDNA li... 133 1e-029
gb|BU867525.1|BU867525 M101C08 Populus flower cDNA library ... 133 1e-029
gb|BU870365.1|BU870365 Q011F03 Populus flower cDNA library ... 133 1e-029
gb|BU872396.1|BU872396 Q042E06 Populus flower cDNA library ... 133 1e-029
gb|BU873965.1|BU873965 Q062G02 Populus flower cDNA library ... 133 1e-029
gb|BU874608.1|BU874608 Q069H10 Populus flower cDNA library ... 133 1e-029
gb|BU895721.1|BU895721 X030A10 Populus wood cDNA library Po... 133 1e-029
gb|CA931693.1|CA931693 MTU4TA.P21.G04 Aspen apex cDNA Libra... 133 1e-029
gb|CA821341.1|CA821341 RSH01F09 two-month-old roots from cl... 133 1e-029
gb|CA823133.1|CA823133 R21C09 two-month-old roots from clon... 133 1e-029
gb|CA826019.1|CA826019 R71C06 two-month-old roots from clon... 133 1e-029
gb|CA826450.1|CA826450 R78E02 two-month-old roots from clon... 133 1e-029
gb|CF228045.1|CF228045 PtaXM0008A7A0701 Poplar cDNA library... 133 1e-029
gb|CF230569.1|CF230569 PtaC0010A6A0602 Poplar cDNA library ... 133 1e-029
gb|CF231043.1|CF231043 PtaC0016F3F0311 Poplar cDNA library ... 133 1e-029
gb|CF233484.1|CF233484 PtaJXO0024B4B0404 Poplar cDNA librar... 133 1e-029
gb|CK088264.1|CK088264 A045P51.3pR Hybrid aspen plasmid lib... 133 1e-029
gb|CK088545.1|CK088545 A058P33.3pR Hybrid aspen plasmid lib... 133 1e-029
gb|CN550223.1|CN550223 GQ0242.B3_O06 GQ024 Populus trichoca... 133 1e-029
gb|CK318544.1|CK318544 B9P10d08 Populus stem seasonal libra... 133 1e-029
gb|CV226710.1|CV226710 WS0165.B21_B01 PT-DX-A-7 Populus tri... 133 1e-029
gb|CV226879.1|CV226879 WS0165.B21_I20 PT-DX-A-7 Populus tri... 133 1e-029
gb|CV229322.1|CV229322 WS01912.B21_O18 PT-DX-N-A-10 Populus... 133 1e-029
gb|CV231429.1|CV231429 WS0194.B21_I09 PT-DX-N-A-10 Populus ... 133 1e-029
gb|CV233660.1|CV233660 WS01211.B21_O04 PT-GT-FL-A-3 Populus... 133 1e-029
gb|CV249075.1|CV249075 WS01122.B21_O21 PT-P-FL-A-2 Populus ... 133 1e-029
gb|CV251627.1|CV251627 WS0117.B21_M04 PT-P-FL-A-2 Populus t... 133 1e-029
gb|CV254307.1|CV254307 WS0224.B21_M01 PTxD-ICC-A-12 Populus... 133 1e-029
gb|CV276365.1|CV276365 WS0179.B21_I13 PTxD-NR-A-8 Populus t... 133 1e-029
gb|CV280095.1|CV280095 WS0134.B21_M14 PTxD-IL-FL-A-4 Populu... 133 1e-029
gb|CV282097.1|CV282097 WS0183.B21_L08 PTxD-IL-N-A-9 Populus... 133 1e-029
gb|CX169082.1|CX169082 E07_96-105_09.ab1 leaf inoculated wi... 133 1e-029
gb|CX182625.1|CX182625 F11_45-85_11.ab1 leaf inoculated wit... 133 1e-029
gb|DN493820.1|DN493820 I011P29.5pR Populus senescing leaves... 133 1e-029
gb|DT487563.1|DT487563 WS02534.B21_A14 PT-MB-N-A-15 Populus... 133 1e-029
gb|DT496269.1|DT496269 WS01122.BR_O21 PT-P-FL-A-2 Populus t... 133 1e-029
gb|DT502934.1|DT502934 WS0134.BR_M14 PTxD-IL-FL-A-4 Populus... 133 1e-029
gb|DT518563.1|DT518563 WS02438.B21_I17 PTxD-ICC-N-A-14 Popu... 133 1e-029
gb|DT519774.1|DT519774 WS02443.B21_K03 PTxD-ICC-N-A-14 Popu... 133 1e-029
gb|CF233444.1|CF233444 PtaJXO0023F5F0511 Poplar cDNA librar... 131 5e-029
gb|CF235133.1|CF235133 PtaJXT0019C4C0406 Poplar cDNA librar... 131 5e-029
gb|CN521262.1|CN521262 GQ0113.B3_L20 GQ011 Populus trichoca... 131 5e-029
gb|CF230152.1|CF230152 PtaC0004D7D0707 Poplar cDNA library ... 127 8e-028
gb|CF236438.1|CF236438 PtaJXT2G3G0313 Poplar cDNA library f... 127 8e-028
gb|BU816495.1|BU816495 N065G02 Populus bark cDNA library Po... 125 3e-027
gb|BU834573.1|BU834573 T063A10 Populus apical shoot cDNA li... 125 3e-027
gb|BU896972.1|BU896972 X048G09 Populus wood cDNA library Po... 125 3e-027
gb|CF228894.1|CF228894 PtaXM0018F12F1212 Poplar cDNA librar... 125 3e-027
gb|AJ779525.1|AJ779525 AJ779525 Populus euphratica root 3-6... 125 3e-027
gb|CV131450.1|CV131450 L2P07b04 Populus stem seasonal libra... 125 3e-027
gb|CV246972.1|CV246972 WS01116.B21_J21 PT-P-FL-A-2 Populus ... 125 3e-027
gb|CX181554.1|CX181554 E12_45-28_10.ab1 leaf inoculated wit... 125 3e-027
gb|DT493836.1|DT493836 WS01116.BR_J21 PT-P-FL-A-2 Populus t... 125 3e-027
gb|CN524434.1|CN524434 GQ015M15.T3_D01 GQ015 Populus tricho... 123 1e-026
gb|CK088408.1|CK088408 A052P01.3pR Hybrid aspen plasmid lib... 121 5e-026
gb|CX654509.1|CX654509 PO02011C02 Poplar SC cDNA library Po... 121 5e-026
gb|BI125044.1|BI125044 I054P90P Populus leaf cDNA library P... 117 8e-025
gb|CA931459.1|CA931459 MTU2TA.P7.F01 Aspen apex cDNA Librar... 117 8e-025
gb|CK116812.1|CK116812 B018P18 Hybrid aspen plasmid library... 117 8e-025
gb|CX655108.1|CX655108 PO01004H04 Poplar SC cDNA library Po... 117 8e-025
gb|BI129295.1|BI129295 G088P70Y Populus cambium cDNA librar... 115 3e-024
gb|CA931381.1|CA931381 MTU2TA.P6.E11 Aspen apex cDNA Librar... 115 3e-024
gb|CF230141.1|CF230141 PtaC0004C8C0806 Poplar cDNA library ... 113 1e-023
gb|CK107805.1|CK107805 G057P68 Populus tension wood cDNA li... 113 1e-023
gb|DT471038.1|DT471038 WS01211.BR_O04 PT-GT-FL-A-3 Populus ... 113 1e-023
gb|DT497971.1|DT497971 WS0114.BR_A03 PT-P-FL-A-2 Populus tr... 113 1e-023
gb|BI127256.1|BI127256 G057P68Y Populus cambium cDNA librar... 109 2e-022
gb|CN517509.1|CN517509 GQ0091.B3_N17 GQ009 Populus trichoca... 103 1e-020
gb|AJ774917.1|AJ774917 AJ774917 Populus euphratica shoot 3-... 103 1e-020
gb|DT525174.1|DT525174 WS02044.C21_K10 PTxN-IB-N-A-11 Popul... 101 5e-020
gb|BI125710.1|BI125710 I064P89P Populus leaf cDNA library P... 100 2e-019
gb|BU825539.1|BU825539 UK110TA03 Populus apical shoot cDNA ... 98 8e-019
gb|CV231782.1|CV231782 WS0195.B21_I21 PT-DX-N-A-10 Populus ... 94 1e-017
gb|BI126963.1|BI126963 I083P78P Populus leaf cDNA library P... 92 5e-017
gb|BU817010.1|BU817010 UA11BPG12 Populus tremula cambium cD... 92 5e-017
gb|BI126975.1|BI126975 I084P02P Populus leaf cDNA library P... 80 2e-013
gb|BI127352.1|BI127352 G059P02Y Populus cambium cDNA librar... 78 7e-013
gb|DT499782.1|DT499782 WS9991.BR_F10 PT-P-FL-A-2 Populus tr... 78 7e-013
gb|CK317891.1|CK317891 B9P03a06 Populus stem seasonal libra... 76 3e-012
gb|BU829753.1|BU829753 K047P54P Populus apical shoot cDNA l... 70 2e-010
gb|CK111550.1|CK111550 Q041D11 Populus dormant bud cDNA lib... 68 7e-010
gb|CN193354.1|CN193354 PtdH859 hybrid poplar systemically w... 68 7e-010
gb|CK099104.1|CK099104 A052P01.5pR Hybrid aspen plasmid lib... 66 3e-009
gb|DT499252.1|DT499252 WS0117.BR_M04 PT-P-FL-A-2 Populus tr... 62 4e-008
gb|AI163638.1|AI163638 A045p51u Hybrid aspen plasmid librar... 52 4e-005
gb|CB184969.1|CB184969 PopSC00103 Poplar SC cDNA library Po... 52 4e-005
gb|CF236896.1|CF236896 PtaJXT8E3E0309 Poplar cDNA library f... 52 4e-005
gb|CK117305.1|CK117305 B046P21 Hybrid aspen plasmid library... 52 4e-005
gb|DT525753.1|DT525753 WS02046.C21_D06 PTxN-IB-N-A-11 Popul... 52 4e-005
gb|AJ777121.1|AJ777121 AJ777121 Populus euphratica root 3-6... 46 0.002
gb|BU834704.1|BU834704 T064G02 Populus apical shoot cDNA li... 44 0.010
gb|CK098973.1|CK098973 A045P51.5pR Hybrid aspen plasmid lib... 44 0.010
gb|CK099247.1|CK099247 A058P33.5pR Hybrid aspen plasmid lib... 44 0.010
gb|CV234473.1|CV234473 WS01215.B21.1_A23 PT-GT-FL-A-3 Popul... 42 0.038
gb|AI163979.1|AI163979 A052p01u Hybrid aspen plasmid librar... 40 0.15
gb|CK093840.1|CK093840 I001P57.3pR Populus senescing leaves... 40 0.15
>gb|CV246665.1|CV246665 WS01111.B21_H24 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01111_H24 3', mRNA sequence
Length = 768
Score = 198 bits (100), Expect = 3e-049
Identities = 157/176 (89%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
|||||||||||||||||||| | ||||||||| ||||| || ||||||||||||||||||
Sbjct: 285 gcccactggttctccctgcgcacctcctcttcttcctctggagtgaagtcattcttgatg 344
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| || |||||||||||||||||||| ||||| ||||||||||||||||| ||||||||
Sbjct: 345 ttaaatgtcttgcgaatctcttctggagtcttccccttgatcatgtcagccacagtctgg 404
Query: 467 caggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatgaggtc 522
||||||| || |||| |||||||||||||||||||| || |||| |||||||||
Sbjct: 405 caggtcaaatctagcaagcccttgatgttcagatagttagctgccaggatgaggtc 460
>gb|CV280449.1|CV280449 WS0136.B21_E22 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0136_E22 3', mRNA sequence
Length = 853
Score = 198 bits (100), Expect = 3e-049
Identities = 157/176 (89%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
|||||||||||||||||||| | ||||||||| ||||| || ||||||||||||||||||
Sbjct: 318 gcccactggttctccctgcgcacctcctcttcttcctctggagtgaagtcattcttgatg 377
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| || |||||||||||||||||||| ||||| ||||||||||||||||| ||||||||
Sbjct: 378 ttaaatgtcttgcgaatctcttctggagtcttccccttgatcatgtcagccacagtctgg 437
Query: 467 caggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatgaggtc 522
||||||| || |||| |||||||||||||||||||| || |||| |||||||||
Sbjct: 438 caggtcaaatctagcaagcccttgatgttcagatagttagctgccaggatgaggtc 493
>gb|DT520194.1|DT520194 WS02446.B21.1_N20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02446_N20 3', mRNA sequence
Length = 537
Score = 198 bits (100), Expect = 3e-049
Identities = 157/176 (89%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
|||||||||||||||||||| | ||||||||| ||||| || ||||||||||||||||||
Sbjct: 320 gcccactggttctccctgcgcacctcctcttcttcctctggagtgaagtcattcttgatg 379
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| || |||||||||||||||||||| ||||| ||||||||||||||||| ||||||||
Sbjct: 380 ttaaatgtcttgcgaatctcttctggagtcttccccttgatcatgtcagccacagtctgg 439
Query: 467 caggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatgaggtc 522
||||||| || |||| |||||||||||||||||||| || |||| |||||||||
Sbjct: 440 caggtcaaatctagcaagcccttgatgttcagatagttagctgccaggatgaggtc 495
>gb|CV276168.1|CV276168 WS0178.B21.1_N22 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0178_N22 3', mRNA sequence
Length = 804
Score = 190 bits (96), Expect = 7e-047
Identities = 156/176 (88%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
|||||||||||||||||||| | ||||||||| ||||| || ||||||||||||||||||
Sbjct: 282 gcccactggttctccctgcgcacctcctcttcttcctctggagtgaagtcattcttgatg 341
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| || |||||||||||||||||||| ||||| ||||||||||||||||| ||||||||
Sbjct: 342 ttaaatgtcttgcgaatctcttctggagtcttccccttgatcatgtcagccacagtctgg 401
Query: 467 caggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatgaggtc 522
|| |||| || |||| |||||||||||||||||||| || |||| |||||||||
Sbjct: 402 caagtcaaatctagcaagcccttgatgttcagatagttagctgccaggatgaggtc 457
>gb|CX171019.1|CX171019 A09_69-70_01.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 688
Score = 190 bits (96), Expect = 7e-047
Identities = 156/176 (88%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
|||||||||||||||||||| | ||||||||| ||||| || ||||||||||||||||||
Sbjct: 544 gcccactggttctccctgcgcacctcctcttcttcctctggagtgaagtcattcttgatg 485
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| || |||||||||||||||||||| ||||| ||||||||||||||||| ||||||||
Sbjct: 484 ttaaatgtcttgcgaatctcttctggagtcttccccttgatcatgtcagccacagtctgg 425
Query: 467 caggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatgaggtc 522
|| |||| || |||| |||||||||||||||||||| || |||| |||||||||
Sbjct: 424 caagtcaaatctagcaagcccttgatgttcagatagttagctgccaggatgaggtc 369
>gb|CX654403.1|CX654403 PO02004B06 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02004B06 5', mRNA sequence
Length = 608
Score = 190 bits (96), Expect = 7e-047
Identities = 156/176 (88%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
|||||||||||||||||||| | |||||| || ||||| || ||||||||||||||||||
Sbjct: 525 gcccactggttctccctgcgcacctcctcctcttcctctggagtgaagtcattcttgatg 466
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| || ||||||||||||||||| || ||||| ||||||||||||||||| ||||||||
Sbjct: 465 ttaaatgtcttgcgaatctcttccggagtcttccccttgatcatgtcagccacagtctgg 406
Query: 467 caggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatgaggtc 522
||||||| || |||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 405 caggtcaaatctagcaagcccttgatgttcagatagttagctgccaagatgaggtc 350
>gb|CX658892.1|CX658892 PO01023F07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01023F07 5', mRNA sequence
Length = 625
Score = 190 bits (96), Expect = 7e-047
Identities = 156/176 (88%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
|||||||||||||||||||| | |||||| || ||||| || ||||||||||||||||||
Sbjct: 519 gcccactggttctccctgcgcacctcctcctcttcctctggagtgaagtcattcttgatg 460
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| || ||||||||||||||||| || ||||| ||||||||||||||||| ||||||||
Sbjct: 459 ttaaatgtcttgcgaatctcttccggagtcttccccttgatcatgtcagccacagtctgg 400
Query: 467 caggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatgaggtc 522
||||||| || |||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 399 caggtcaaatctagcaagcccttgatgttcagatagttagctgccaagatgaggtc 344
>gb|BU825959.1|BU825959 UK115TA10 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 570
Score = 182 bits (92), Expect = 2e-044
Identities = 155/176 (88%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
|||||||||||||||||||| | |||||| || ||||| || ||||||||||||||||||
Sbjct: 553 gcccactggttctccctgcgcacctcctcctcttcctctggagtgaagtcattcttgatg 494
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| || ||||||||||||||||| || ||||| ||||||||||||||||| ||||||||
Sbjct: 493 ttaaatgtcttgcgaatctcttccggagtcttccccttgatcatgtcagccacagtctgg 434
Query: 467 caggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatgaggtc 522
||||||| || |||| |||||||||||||||||||| || |||| |||||||||
Sbjct: 433 caggtcaaatctagcaagcccttgatgttcagatagttagctgccaggatgaggtc 378
>gb|BU892491.1|BU892491 P064E07 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 525
Score = 182 bits (92), Expect = 2e-044
Identities = 155/176 (88%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
|||||||||||||||||||| | |||||| || ||||| || ||||||||||||||||||
Sbjct: 230 gcccactggttctccctgcgcacctcctcctcttcctctggagtgaagtcattcttgatg 171
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| || ||||||||||||||||| || ||||| ||||||||||||||||| ||||||||
Sbjct: 170 ttaaatgtcttgcgaatctcttccggagtcttccccttgatcatgtcagccacagtctgg 111
Query: 467 caggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatgaggtc 522
||||||| || |||| |||||||||||||||||||| || |||| |||||||||
Sbjct: 110 caggtcaaatctagcaagcccttgatgttcagatagttagctgccaggatgaggtc 55
>gb|CA930846.1|CA930846 MTU2TA.P11.A12 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 545
Score = 182 bits (92), Expect = 2e-044
Identities = 155/176 (88%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
|||||||||||||||||||| | |||||| || ||||| || ||||||||||||||||||
Sbjct: 247 gcccactggttctccctgcgcacctcctcctcttcctctggagtgaagtcattcttgatg 306
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| || ||||||||||||||||| || ||||| ||||||||||||||||| ||||||||
Sbjct: 307 ttaaatgtcttgcgaatctcttccggagtcttccccttgatcatgtcagccacagtctgg 366
Query: 467 caggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatgaggtc 522
||||||| || |||| |||||||||||||||||||| || |||| |||||||||
Sbjct: 367 caggtcaaatctagcaagcccttgatgttcagatagttagctgccaggatgaggtc 422
>gb|CX656469.1|CX656469 PO01001F02 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01001F02 5', mRNA sequence
Length = 601
Score = 182 bits (92), Expect = 2e-044
Identities = 155/176 (88%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
|||||||||||||||||||| | |||||| || ||||| || ||||||||||||||||||
Sbjct: 495 gcccactggttctccctgcgcacctcctcctcttcctctggagtgaagtcattcttgatg 436
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| || ||||||||||||||||| || ||||| ||||||||||||||||| ||||||||
Sbjct: 435 ttaaatgtcttgcgaatctcttccggagtcttccccttgatcatgtcagccacagtctgg 376
Query: 467 caggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatgaggtc 522
||||||| || |||| |||||||||||||||||||| || |||| |||||||||
Sbjct: 375 caggtcaaatctagcaagcccttgatgttcagatagttagctgccaggatgaggtc 320
>gb|CV271446.1|CV271446 WS0154.B21_L16 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0154_L16 3', mRNA sequence
Length = 472
Score = 176 bits (89), Expect = 1e-042
Identities = 137/153 (89%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
|||||||||||||||||||| | ||||||||| ||||| || ||||||||||||||||||
Sbjct: 315 gcccactggttctccctgcgcacctcctcttcttcctctggagtgaagtcattcttgatg 374
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| || |||||||||||||||||||| ||||| ||||||||||||||||| ||||||||
Sbjct: 375 ttaaatgtcttgcgaatctcttctggagtcttccccttgatcatgtcagccacagtctgg 434
Query: 467 caggtcaggtcgagcagacccttgatgttcaga 499
||||||| || |||| |||||||||||||||
Sbjct: 435 caggtcaaatctagcaagcccttgatgttcaga 467
>gb|AJ776973.1|AJ776973 AJ776973 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400021B12F1, mRNA sequence
Length = 706
Score = 174 bits (88), Expect = 4e-042
Identities = 154/176 (87%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
|||||||||||||||||||| | |||||| || ||||| || ||||||||||||||||||
Sbjct: 399 gcccactggttctccctgcgcacctcctcctcttcctctggagtgaagtcattcttgatg 340
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| || |||||||||||||||||||| ||||| ||||||||||||||||| ||||||||
Sbjct: 339 ttaaatgtcttgcgaatctcttctggagtcttccccttgatcatgtcagccacagtctgg 280
Query: 467 caggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatgaggtc 522
||||||| || |||| ||||||||||||| ||||| || |||| |||||||||
Sbjct: 279 caggtcaaatctagcaagtccttgatgttcaggtagttagctgccaggatgaggtc 224
>gb|AI166350.1|AI166350 xylem.est.191 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 585
Score = 172 bits (87), Expect = 2e-041
Identities = 192/227 (84%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| || |||||||||||||| || || | |||||| || ||||| || || ||||||
Sbjct: 357 tactcaaatgcccactggttctctctccgaacctcctcctcttcctctggtgtaaagtca 298
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 297 ttcttgatgttgaatgtcttgcggatctcttctggagtcttgcccttgatcatatcagcc 238
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|| ||||||| || ||||| |||| ||||||||||||||| || ||||||| ||||
Sbjct: 237 actctctgacaagtgaggtccagcaagttcttgatgttcagataattggcagccaggatg 178
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatccca 564
|| ||||| || ||||||||||| || |||||||| || ||||||||
Sbjct: 177 agatcgaagagagtggcctggtcaactttgacgaattcagcatccca 131
Score = 42.1 bits (21), Expect = 0.038
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattacctt 696
|||||||| |||||||||||||| |||||
Sbjct: 75 acgtgctttttgcagtactcgatcacctt 47
>gb|BI129095.1|BI129095 G085P83Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 437
Score = 172 bits (87), Expect = 2e-041
Identities = 192/227 (84%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| || |||||||||||||| || || | |||||| || ||||| || || ||||||
Sbjct: 286 tactcaaatgcccactggttctctctccgaacctcctcctcttcctctggtgtaaagtca 227
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 226 ttcttgatgttgaatgtcttgcggatctcttctggagtcttgcccttgatcatatcagcc 167
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|| ||||||| || ||||| |||| ||||||||||||||| || ||||||| ||||
Sbjct: 166 actctctgacaagtgaggtccagcaagttcttgatgttcagataattggcagccaggatg 107
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatccca 564
|| ||||| || ||||||||||| || |||||||| || ||||||||
Sbjct: 106 agatcgaagagagtggcctggtcaactttgacgaattcagcatccca 60
>gb|CK102644.1|CK102644 G085P83.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G085P83 5', mRNA sequence
Length = 451
Score = 172 bits (87), Expect = 2e-041
Identities = 192/227 (84%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| || |||||||||||||| || || | |||||| || ||||| || || ||||||
Sbjct: 286 tactcaaatgcccactggttctctctccgaacctcctcctcttcctctggtgtaaagtca 227
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 226 ttcttgatgttgaatgtcttgcggatctcttctggagtcttgcccttgatcatatcagcc 167
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|| ||||||| || ||||| |||| ||||||||||||||| || ||||||| ||||
Sbjct: 166 actctctgacaagtgaggtccagcaagttcttgatgttcagataattggcagccaggatg 107
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatccca 564
|| ||||| || ||||||||||| || |||||||| || ||||||||
Sbjct: 106 agatcgaagagagtggcctggtcaactttgacgaattcagcatccca 60
>gb|CK108364.1|CK108364 GO85P83 Populus tension wood cDNA library Populus tremula x Populus
tremuloides cDNA clone GO85P83 5', mRNA sequence
Length = 460
Score = 172 bits (87), Expect = 2e-041
Identities = 192/227 (84%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| || |||||||||||||| || || | |||||| || ||||| || || ||||||
Sbjct: 286 tactcaaatgcccactggttctctctccgaacctcctcctcttcctctggtgtaaagtca 227
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 226 ttcttgatgttgaatgtcttgcggatctcttctggagtcttgcccttgatcatatcagcc 167
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|| ||||||| || ||||| |||| ||||||||||||||| || ||||||| ||||
Sbjct: 166 actctctgacaagtgaggtccagcaagttcttgatgttcagataattggcagccaggatg 107
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatccca 564
|| ||||| || ||||||||||| || |||||||| || ||||||||
Sbjct: 106 agatcgaagagagtggcctggtcaactttgacgaattcagcatccca 60
>gb|CN522906.1|CN522906 GQ0122.B3_D01 GQ012 Populus trichocarpa x Populus deltoides cDNA
clone GQ0122_D01 5', mRNA sequence
Length = 480
Score = 172 bits (87), Expect = 2e-041
Identities = 192/227 (84%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| || |||||||||||||| || || | |||||| || ||||| || || ||||||
Sbjct: 311 tactcaaatgcccactggttctctctccgaacctcctcctcttcctctggtgtaaagtca 252
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 251 ttcttgatgttgaatgtcttgcggatctcttctggagtcttgcccttgatcatatcagcc 192
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|| ||||||| || ||||| |||| ||||||||||||||| || ||||||| ||||
Sbjct: 191 actctctgacaagtgaggtccagcaagttcttgatgttcagataattggcagccaggatg 132
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatccca 564
|| ||||| || ||||||||||| || |||||||| || ||||||||
Sbjct: 131 agatcgaagagagtggcctggtcaactttgacgaattcagcatccca 85
Score = 42.1 bits (21), Expect = 0.038
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattacctt 696
|||||||| |||||||||||||| |||||
Sbjct: 32 acgtgctttttgcagtactcgatcacctt 4
>gb|CV229549.1|CV229549 WS01913.B21_K10 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01913_K10 3', mRNA sequence
Length = 730
Score = 172 bits (87), Expect = 2e-041
Identities = 192/227 (84%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| || |||||||||||||| || || | |||||| || ||||| || || ||||||
Sbjct: 243 tactcaaatgcccactggttctctctccgaacctcctcctcttcctctggtgtaaagtca 302
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 303 ttcttgatgttgaatgtcttgcggatctcttctggagtcttgcccttgatcatatcagcc 362
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|| ||||||| || ||||| |||| ||||||||||||||| || ||||||| ||||
Sbjct: 363 actctctgacaagtgaggtccagcaagttcttgatgttcagataattggcagccaggatg 422
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatccca 564
|| ||||| || ||||||||||| || |||||||| || ||||||||
Sbjct: 423 agatcgaagagagtggcctggtcaactttgacgaattcagcatccca 469
Score = 42.1 bits (21), Expect = 0.038
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattacctt 696
|||||||| |||||||||||||| |||||
Sbjct: 522 acgtgctttttgcagtactcgatcacctt 550
>gb|CV230345.1|CV230345 WS01916.B21_D19 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01916_D19 3', mRNA sequence
Length = 437
Score = 172 bits (87), Expect = 2e-041
Identities = 192/227 (84%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| || |||||||||||||| || || | |||||| || ||||| || || ||||||
Sbjct: 152 tactcaaatgcccactggttctctctccgaacctcctcctcttcctctggtgtaaagtca 211
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 212 ttcttgatgttgaatgtcttgcggatctcttctggagtcttgcccttgatcatatcagcc 271
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|| ||||||| || ||||| |||| ||||||||||||||| || ||||||| ||||
Sbjct: 272 actctctgacaagtgaggtccagcaagttcttgatgttcagataattggcagccaggatg 331
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatccca 564
|| ||||| || ||||||||||| || |||||||| || ||||||||
Sbjct: 332 agatcgaagagagtggcctggtcaactttgacgaattcagcatccca 378
>gb|CV230699.1|CV230699 WS0192.B21_F24 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0192_F24 3', mRNA sequence
Length = 760
Score = 172 bits (87), Expect = 2e-041
Identities = 192/227 (84%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| || |||||||||||||| || || | |||||| || ||||| || || ||||||
Sbjct: 226 tactcaaatgcccactggttctctctccgaacctcctcctcttcctctggtgtaaagtca 285
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 286 ttcttgatgttgaatgtcttgcggatctcttctggagtcttgcccttgatcatatcagcc 345
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|| ||||||| || ||||| |||| ||||||||||||||| || ||||||| ||||
Sbjct: 346 actctctgacaagtgaggtccagcaagttcttgatgttcagataattggcagccaggatg 405
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatccca 564
|| ||||| || ||||||||||| || |||||||| || ||||||||
Sbjct: 406 agatcgaagagagtggcctggtcaactttgacgaattcagcatccca 452
Score = 42.1 bits (21), Expect = 0.038
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattacctt 696
|||||||| |||||||||||||| |||||
Sbjct: 505 acgtgctttttgcagtactcgatcacctt 533
>gb|CV232291.1|CV232291 WS0197.B21_C07 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0197_C07 3', mRNA sequence
Length = 744
Score = 172 bits (87), Expect = 2e-041
Identities = 192/227 (84%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| || |||||||||||||| || || | |||||| || ||||| || || ||||||
Sbjct: 243 tactcaaatgcccactggttctctctccgaacctcctcctcttcctctggtgtaaagtca 302
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 303 ttcttgatgttgaatgtcttgcggatctcttctggagtcttgcccttgatcatatcagcc 362
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|| ||||||| || ||||| |||| ||||||||||||||| || ||||||| ||||
Sbjct: 363 actctctgacaagtgaggtccagcaagttcttgatgttcagataattggcagccaggatg 422
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatccca 564
|| ||||| || ||||||||||| || |||||||| || ||||||||
Sbjct: 423 agatcgaagagagtggcctggtcaactttgacgaattcagcatccca 469
Score = 42.1 bits (21), Expect = 0.038
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattacctt 696
|||||||| |||||||||||||| |||||
Sbjct: 522 acgtgctttttgcagtactcgatcacctt 550
>gb|CV235256.1|CV235256 WS01218.B21_G12 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01218_G12 3', mRNA sequence
Length = 707
Score = 172 bits (87), Expect = 2e-041
Identities = 192/227 (84%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| || |||||||||||||| || || | |||||| || ||||| || || ||||||
Sbjct: 239 tactcaaatgcccactggttctctctccgaacctcctcctcttcctctggtgtaaagtca 298
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 299 ttcttgatgttgaatgtcttgcggatctcttctggagtcttgcccttgatcatatcagcc 358
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|| ||||||| || ||||| |||| ||||||||||||||| || ||||||| ||||
Sbjct: 359 actctctgacaagtgaggtccagcaagttcttgatgttcagataattggcagccaggatg 418
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatccca 564
|| ||||| || ||||||||||| || |||||||| || ||||||||
Sbjct: 419 agatcgaagagagtggcctggtcaactttgacgaattcagcatccca 465
Score = 44.1 bits (22), Expect = 0.010
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||||| |||||||||||||| ||||| | || | |||| | |||||||| | |
Sbjct: 521 acgtgctttttgcagtactcgatcaccttagcaagaaccttgcttgtaacgttaggtaaa 580
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtg 765
||||| ||||| || ||||||||||| || ||||||||
Sbjct: 581 gggataccgttatcagcgcagtcatcttcaatcatgtg 618
>gb|CV237572.1|CV237572 WS0123.B21_E22 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0123_E22 3', mRNA sequence
Length = 686
Score = 172 bits (87), Expect = 2e-041
Identities = 192/227 (84%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| || |||||||||||||| || || | |||||| || ||||| || || ||||||
Sbjct: 310 tactcaaatgcccactggttctctctccgaacctcctcctcttcctctggtgtaaagtca 369
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 370 ttcttgatgttgaatgtcttgcggatctcttctggagtcttgcccttgatcatatcagcc 429
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|| ||||||| || ||||| |||| ||||||||||||||| || ||||||| ||||
Sbjct: 430 actctctgacaagtgaggtccagcaagttcttgatgttcagataattggcagccaggatg 489
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatccca 564
|| ||||| || ||||||||||| || |||||||| || ||||||||
Sbjct: 490 agatcgaagagagtggcctggtcaactttgacgaattcagcatccca 536
Score = 42.1 bits (21), Expect = 0.038
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattacctt 696
|||||||| |||||||||||||| |||||
Sbjct: 592 acgtgctttttgcagtactcgatcacctt 620
>gb|CV261999.1|CV261999 WS02018.B21_F21 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02018_F21 3', mRNA sequence
Length = 747
Score = 172 bits (87), Expect = 2e-041
Identities = 192/227 (84%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| || |||||||||||||| || || | |||||| || ||||| || || ||||||
Sbjct: 242 tactcaaatgcccactggttctctctccgaacctcctcctcttcctctggtgtaaagtca 301
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 302 ttcttgatgttgaatgtcttgcggatctcttctggagtcttgcccttgatcatatcagcc 361
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|| ||||||| || ||||| |||| ||||||||||||||| || ||||||| ||||
Sbjct: 362 actctctgacaagtgaggtccagcaagttcttgatgttcagataattggcagccaggatg 421
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatccca 564
|| ||||| || ||||||||||| || |||||||| || ||||||||
Sbjct: 422 agatcgaagagagtggcctggtcaactttgacgaattcagcatccca 468
Score = 44.1 bits (22), Expect = 0.010
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||||| |||||||||||||| ||||| | || | |||| | |||||||| | |
Sbjct: 524 acgtgctttttgcagtactcgatcaccttagcaagaaccttgcttgtaacgttaggtaaa 583
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtg 765
||||| ||||| || ||||||||||| || ||||||||
Sbjct: 584 gggataccgttatcagcgcagtcatcttcaatcatgtg 621
>gb|CV281093.1|CV281093 WS0138.B21_P23 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0138_P23 3', mRNA sequence
Length = 798
Score = 172 bits (87), Expect = 2e-041
Identities = 192/227 (84%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| || |||||||||||||| || || | |||||| || ||||| || || ||||||
Sbjct: 241 tactcaaatgcccactggttctctctccgaacctcctcctcttcctctggtgtaaagtca 300
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 301 ttcttgatgttgaatgtcttgcggatctcttctggagtcttgcccttgatcatatcagcc 360
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|| ||||||| || ||||| |||| ||||||||||||||| || ||||||| ||||
Sbjct: 361 actctctgacaagtgaggtccagcaagttcttgatgttcagataattggcagccaggatg 420
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatccca 564
|| ||||| || ||||||||||| || |||||||| || ||||||||
Sbjct: 421 agatcgaagagagtggcctggtcaactttgacgaattcagcatccca 467
Score = 42.1 bits (21), Expect = 0.038
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattacctt 696
|||||||| |||||||||||||| |||||
Sbjct: 520 acgtgctttttgcagtactcgatcacctt 548
>gb|CX182921.1|CX182921 B02_45-123_04.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 624
Score = 172 bits (87), Expect = 2e-041
Identities = 192/227 (84%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| || |||||||||||||| || || | |||||| || ||||| || || ||||||
Sbjct: 506 tactcaaatgcccactggttctctctccgaacctcctcctcttcctctggtgtaaagtca 447
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 446 ttcttgatgttgaatgtcttgcggatctcttctggagtcttgcccttgatcatatcagcc 387
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|| ||||||| || ||||| |||| ||||||||||||||| || ||||||| ||||
Sbjct: 386 actctctgacaagtgaggtccagcaagttcttgatgttcagataattggcagccaggatg 327
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatccca 564
|| ||||| || ||||||||||| || |||||||| || ||||||||
Sbjct: 326 agatcgaagagagtggcctggtcaactttgacgaattcagcatccca 280
Score = 42.1 bits (21), Expect = 0.038
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattacctt 696
|||||||| |||||||||||||| |||||
Sbjct: 227 acgtgctttttgcagtactcgatcacctt 199
>gb|DT469240.1|DT469240 WS01917.C21_C24 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01917_C24 3', mRNA sequence
Length = 749
Score = 172 bits (87), Expect = 2e-041
Identities = 192/227 (84%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| || |||||||||||||| || || | |||||| || ||||| || || ||||||
Sbjct: 243 tactcaaatgcccactggttctctctccgaacctcctcctcttcctctggtgtaaagtca 302
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 303 ttcttgatgttgaatgtcttgcggatctcttctggagtcttgcccttgatcatatcagcc 362
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|| ||||||| || ||||| |||| ||||||||||||||| || ||||||| ||||
Sbjct: 363 actctctgacaagtgaggtccagcaagttcttgatgttcagataattggcagccaggatg 422
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatccca 564
|| ||||| || ||||||||||| || |||||||| || ||||||||
Sbjct: 423 agatcgaagagagtggcctggtcaactttgacgaattcagcatccca 469
Score = 42.1 bits (21), Expect = 0.038
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattacctt 696
|||||||| |||||||||||||| |||||
Sbjct: 522 acgtgctttttgcagtactcgatcacctt 550
>gb|DT473648.1|DT473648 WS0123.BR_E22 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0123_E22 5', mRNA sequence
Length = 662
Score = 172 bits (87), Expect = 2e-041
Identities = 192/227 (84%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| || |||||||||||||| || || | |||||| || ||||| || || ||||||
Sbjct: 530 tactcaaatgcccactggttctctctccgaacctcctcctcttcctctggtgtaaagtca 471
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 470 ttcttgatgttgaatgtcttgcggatctcttctggagtcttgcccttgatcatatcagcc 411
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|| ||||||| || ||||| |||| ||||||||||||||| || ||||||| ||||
Sbjct: 410 actctctgacaagtgaggtccagcaagttcttgatgttcagataattggcagccaggatg 351
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatccca 564
|| ||||| || ||||||||||| || |||||||| || ||||||||
Sbjct: 350 agatcgaagagagtggcctggtcaactttgacgaattcagcatccca 304
Score = 44.1 bits (22), Expect = 0.010
Identities = 79/98 (80%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||||| |||||||||||||| ||||| | || | |||| | |||||||| | |
Sbjct: 248 acgtgctttttgcagtactcgatcaccttagcaagaaccttgcttgtaacgttaggtaaa 189
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtg 765
||||| ||||| || ||||||||||| || ||||||||
Sbjct: 188 gggataccgttatcagcgcagtcatcttcaatcatgtg 151
>gb|DT502293.1|DT502293 WS0132.BR_G14 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0132_G14 5', mRNA sequence
Length = 583
Score = 172 bits (87), Expect = 2e-041
Identities = 192/227 (84%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| || |||||||||||||| || || | |||||| || ||||| || || ||||||
Sbjct: 401 tactcaaatgcccactggttctctctccgaacctcctcctcttcctctggtgtaaagtca 342
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 341 ttcttgatgttgaatgtcttgcggatctcttctggagtcttgcccttgatcatatcagcc 282
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|| ||||||| || ||||| |||| ||||||||||||||| || ||||||| ||||
Sbjct: 281 actctctgacaagtgaggtccagcaagttcttgatgttcagataattggcagccaggatg 222
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatccca 564
|| ||||| || ||||||||||| || |||||||| || ||||||||
Sbjct: 221 agatcgaagagagtggcctggtcaactttgacgaattcagcatccca 175
Score = 44.1 bits (22), Expect = 0.010
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 716 acgttaggaagagggatgccgttgtcggcgcagtcatcctcgatcatgtg 765
|||||||| | |||||| ||||| || ||||||||||| || ||||||||
Sbjct: 71 acgttaggtaaagggataccgttatcagcgcagtcatcttcaatcatgtg 22
>gb|DT502987.1|DT502987 WS0134.BR_P15 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0134_P15 5', mRNA sequence
Length = 707
Score = 172 bits (87), Expect = 2e-041
Identities = 192/227 (84%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| || |||||||||||||| || || | |||||| || ||||| || || ||||||
Sbjct: 530 tactcaaatgcccactggttctctctccgaacctcctcctcttcctctggtgtaaagtca 471
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 470 ttcttgatgttgaatgtcttgcggatctcttctggagtcttgcccttgatcatatcagcc 411
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|| ||||||| || ||||| |||| ||||||||||||||| || ||||||| ||||
Sbjct: 410 actctctgacaagtgaggtccagcaagttcttgatgttcagataattggcagccaggatg 351
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatccca 564
|| ||||| || ||||||||||| || |||||||| || ||||||||
Sbjct: 350 agatcgaagagagtggcctggtcaactttgacgaattcagcatccca 304
Score = 44.1 bits (22), Expect = 0.010
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 716 acgttaggaagagggatgccgttgtcggcgcagtcatcctcgatcatgtg 765
|||||||| | |||||| ||||| || ||||||||||| || ||||||||
Sbjct: 200 acgttaggtaaagggataccgttatcagcgcagtcatcttcaatcatgtg 151
>gb|DT504098.1|DT504098 WS0138.BR_P23 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0138_P23 5', mRNA sequence
Length = 766
Score = 172 bits (87), Expect = 2e-041
Identities = 192/227 (84%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| || |||||||||||||| || || | |||||| || ||||| || || ||||||
Sbjct: 526 tactcaaatgcccactggttctctctccgaacctcctcctcttcctctggtgtaaagtca 467
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 466 ttcttgatgttgaatgtcttgcggatctcttctggagtcttgcccttgatcatatcagcc 407
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|| ||||||| || ||||| |||| ||||||||||||||| || ||||||| ||||
Sbjct: 406 actctctgacaagtgaggtccagcaagttcttgatgttcagataattggcagccaggatg 347
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatccca 564
|| ||||| || ||||||||||| || |||||||| || ||||||||
Sbjct: 346 agatcgaagagagtggcctggtcaactttgacgaattcagcatccca 300
Score = 42.1 bits (21), Expect = 0.038
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattacctt 696
|||||||| |||||||||||||| |||||
Sbjct: 247 acgtgctttttgcagtactcgatcacctt 219
>gb|DT509039.1|DT509039 WS02422.BR_K05 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_K05 5', mRNA sequence
Length = 765
Score = 172 bits (87), Expect = 2e-041
Identities = 192/227 (84%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| || |||||||||||||| || || | |||||| || ||||| || || ||||||
Sbjct: 526 tactcaaatgcccactggttctctctccgaacctcctcctcttcctctggtgtaaagtca 467
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 466 ttcttgatgttgaatgtcttgcggatctcttctggagtcttgcccttgatcatatcagcc 407
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|| ||||||| || ||||| |||| ||||||||||||||| || ||||||| ||||
Sbjct: 406 actctctgacaagtgaggtccagcaagttcttgatgttcagataattggcagccaggatg 347
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatccca 564
|| ||||| || ||||||||||| || |||||||| || ||||||||
Sbjct: 346 agatcgaagagagtggcctggtcaactttgacgaattcagcatccca 300
Score = 44.1 bits (22), Expect = 0.010
Identities = 79/98 (80%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||||| |||||||||||||| ||||| | || | |||| | |||||||| | |
Sbjct: 244 acgtgctttttgcagtactcgatcaccttagcaagaaccttgcttgtaacgttaggtaaa 185
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtg 765
||||| ||||| || ||||||||||| || ||||||||
Sbjct: 184 gggataccgttatcagcgcagtcatcttcaatcatgtg 147
>gb|DT513654.1|DT513654 WS02422.B21_K05 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_K05 3', mRNA sequence
Length = 766
Score = 172 bits (87), Expect = 2e-041
Identities = 192/227 (84%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| || |||||||||||||| || || | |||||| || ||||| || || ||||||
Sbjct: 241 tactcaaatgcccactggttctctctccgaacctcctcctcttcctctggtgtaaagtca 300
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 301 ttcttgatgttgaatgtcttgcggatctcttctggagtcttgcccttgatcatatcagcc 360
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|| ||||||| || ||||| |||| ||||||||||||||| || ||||||| ||||
Sbjct: 361 actctctgacaagtgaggtccagcaagttcttgatgttcagataattggcagccaggatg 420
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatccca 564
|| ||||| || ||||||||||| || |||||||| || ||||||||
Sbjct: 421 agatcgaagagagtggcctggtcaactttgacgaattcagcatccca 467
Score = 44.1 bits (22), Expect = 0.010
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||||| |||||||||||||| ||||| | || | |||| | |||||||| | |
Sbjct: 523 acgtgctttttgcagtactcgatcaccttagcaagaaccttgcttgtaacgttaggtaaa 582
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtg 765
||||| ||||| || ||||||||||| || ||||||||
Sbjct: 583 gggataccgttatcagcgcagtcatcttcaatcatgtg 620
>gb|DT526023.1|DT526023 WS02046.C21_O18 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02046_O18 3', mRNA sequence
Length = 748
Score = 172 bits (87), Expect = 2e-041
Identities = 192/227 (84%)
Strand = Plus / Plus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| || |||||||||||||| || || | |||||| || ||||| || || ||||||
Sbjct: 243 tactcaaatgcccactggttctctctccgaacctcctcctcttcctctggtgtaaagtca 302
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 303 ttcttgatgttgaatgtcttgcggatctcttctggagtcttgcccttgatcatatcagcc 362
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|| ||||||| || ||||| |||| ||||||||||||||| || ||||||| ||||
Sbjct: 363 actctctgacaagtgaggtccagcaagttcttgatgttcagataattggcagccaggatg 422
Query: 518 aggtcgaaaagcgtggcctggtcgaccttgacgaagtccgcatccca 564
|| ||||| || ||||||||||| || |||||||| || ||||||||
Sbjct: 423 agatcgaagagagtggcctggtcaactttgacgaattcagcatccca 469
Score = 44.1 bits (22), Expect = 0.010
Identities = 79/98 (80%)
Strand = Plus / Plus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||||| |||||||||||||| ||||| | || | |||| | |||||||| | |
Sbjct: 525 acgtgctttttgcagtactcgatcaccttagcaagaaccttgcttgtaacgttaggtaaa 584
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtg 765
||||| ||||| || ||||||||||| || ||||||||
Sbjct: 585 gggataccgttatcagcgcagtcatcttcaatcatgtg 622
>gb|CF227819.1|CF227819 PtaXM0005A5A0501 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 660
Score = 170 bits (86), Expect = 6e-041
Identities = 153/176 (86%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||| |||||||||||||| | |||||| || |||| || ||||||||||||||||||
Sbjct: 550 gcccantggttctccctgcgcacctcctcctcttcctntggagtgaagtcattcttgatg 491
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| || ||||||||||||||||| || ||||| ||||||||||||||||| ||||||||
Sbjct: 490 ttaaatgtcttgcgaatctcttccggagtcttccccttgatcatgtcagccacagtctgg 431
Query: 467 caggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatgaggtc 522
||||||| || |||| |||||||||||||||||||| || |||| |||||||||
Sbjct: 430 caggtcaaatctagcaagcccttgatgttcagatagttagctgccaggatgaggtc 375
>gb|BU833586.1|BU833586 T050A07 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 597
Score = 167 bits (84), Expect = 1e-039
Identities = 153/176 (86%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||||||||||||| |||| | ||| || || ||||| || ||||||||||||||||||
Sbjct: 552 gcccactggttctccttgcgcacctcgtcctcttcctctggagtgaagtcattcttgatg 493
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| || ||||||||||||||||| || ||||| ||||||||||||||||| ||||||||
Sbjct: 492 ttaaatgtcttgcgaatctcttccggagtcttccccttgatcatgtcagccacagtctgg 433
Query: 467 caggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatgaggtc 522
||||||| || |||| |||||||||||||||||||| || |||| |||||||||
Sbjct: 432 caggtcaaatctagcaagcccttgatgttcagatagttagctgccaggatgaggtc 377
>gb|CX179083.1|CX179083 F05_45-117_11.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 667
Score = 159 bits (80), Expect = 2e-037
Identities = 152/176 (86%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
||||||||||||| |||||| | |||||||| | ||| || ||||||||||||||||||
Sbjct: 490 gcccactggttcttcctgcgcacctcctcttattgctctggagtgaagtcattcttgatg 431
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| || ||| |||||||||||||||| ||||| ||||||||||||||||| ||||||||
Sbjct: 430 ttaaatgtcatgcgaatctcttctggagtcttccccttgatcatgtcagccacagtctgg 371
Query: 467 caggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatgaggtc 522
|| |||| || |||| |||||||||||||||||||| || |||| |||||||||
Sbjct: 370 caagtcaaatctagcaagcccttgatgttcagatagttagctgccaggatgaggtc 315
>gb|DN483591.1|DN483591 PSO201A08 Populus tomentiglandulosa T. Lee cDNA library Populus
tomentiglandulosa cDNA, mRNA sequence
Length = 636
Score = 157 bits (79), Expect = 9e-037
Identities = 172/203 (84%)
Strand = Plus / Minus
Query: 338 tactcgaaggcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtca 397
||||| || |||||||||||||| || || | |||||| || ||||| || || ||||||
Sbjct: 528 tactcaaatgcccactggttctctctccgaacctcctcctcttcctctggtgtaaagtca 469
Query: 398 ttcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagca 457
|||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 468 ttcttgatgttgaatgtcttgcggatctcttctggagtcttgcccttgatcatatcagcc 409
Query: 458 acagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgcagccaagatg 517
|| ||||||| || ||||| |||| ||||||||||||||| || ||||||| ||||
Sbjct: 408 actctctgacaagtgaggtccagcaagttcttgatgttcagataattggcagccaggatg 349
Query: 518 aggtcgaaaagcgtggcctggtc 540
|| ||||| || |||||||||||
Sbjct: 348 agatcgaagagagtggcctggtc 326
Score = 44.1 bits (22), Expect = 0.010
Identities = 79/98 (80%)
Strand = Plus / Minus
Query: 668 acgtgcttgttgcagtactcgattaccttggataggatcttggagttgacgttaggaaga 727
|||||||| |||||||||||||| ||||| | || | |||| |||||||||| | |
Sbjct: 246 acgtgctttttgcagtactcgatcaccttagcaagaaccttgcttgtgacgttaggtaaa 187
Query: 728 gggatgccgttgtcggcgcagtcatcctcgatcatgtg 765
||||| ||||| || ||||| ||||| || ||||||||
Sbjct: 186 gggataccgttatcagcgcaatcatcttcaatcatgtg 149
>gb|BU822094.1|BU822094 UB32BPE09 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 516
Score = 155 bits (78), Expect = 4e-036
Identities = 120/134 (89%)
Strand = Plus / Minus
Query: 389 gtgaagtcattcttgatgttgaaggtcttgcgaatctcttctggtgtcttgcccttgatc 448
|||||||||||||||||||| || ||||||||||||||||| || ||||| |||||||||
Sbjct: 511 gtgaagtcattcttgatgttaaatgtcttgcgaatctcttccggagtcttccccttgatc 452
Query: 449 atgtcagcaacagtctgacaggtcaggtcgagcagacccttgatgttcagatagtttgca 508
|||||||| |||||||| ||||||| ||| |||| |||||||||||||||||||| ||
Sbjct: 451 atgtcagccacagtctggcaggtcaagtctagcaagcccttgatgttcagatagttagct 392
Query: 509 gccaagatgaggtc 522
|||| |||||||||
Sbjct: 391 gccaggatgaggtc 378
>gb|CV252069.1|CV252069 WS0119.B21_E11 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0119_E11 3', mRNA sequence
Length = 481
Score = 151 bits (76), Expect = 6e-035
Identities = 136/156 (87%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
|||||||||||||||||| | ||||||||| ||||| || ||||||||||||||||||
Sbjct: 279 gcccactggttctccctgaacacctcctcttcttcctctggagtgaagtcattcttgatg 338
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| || ||||||| |||||||||||| ||||| ||||||||| ||||||| ||||||||
Sbjct: 339 ttaaatgtcttgccaatctcttctggagtcttccccttgatcttgtcagccacagtctgg 398
Query: 467 caggtcaggtcgagcagacccttgatgttcagatag 502
||||||| || |||| ||||||||||||||||||
Sbjct: 399 caggtcaaatctagcaagcccttgatgttcagatag 434
>gb|BU868098.1|BU868098 M111B12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 658
Score = 149 bits (75), Expect = 2e-034
Identities = 144/167 (86%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
|||||||||||||| | ||| | ||||| ||||||||||| || |||||||||||||||
Sbjct: 486 gcccactggttctcacggcgaacttcctcctcctcctcaggtgtaaagtcattcttgatg 427
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| |||||||| | ||| || ||||| ||||| |||||||||||||| |||||||||||
Sbjct: 426 ttaaaggtcttcctaatttcctctggagtctttcccttgatcatgtctgcaacagtctgg 367
Query: 467 caggtcaggtcgagcagacccttgatgttcagatagtttgcagccaa 513
|| |||||||| |||| |||||||||||||||||||| || |||||
Sbjct: 366 catgtcaggtccagcaagcccttgatgttcagatagttggccgccaa 320
>gb|CV235365.1|CV235365 WS01218.B21_N18 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01218_N18 3', mRNA sequence
Length = 616
Score = 149 bits (75), Expect = 2e-034
Identities = 144/167 (86%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
|||||||||||||| | ||| | ||||| ||||||||||| || |||||||||||||||
Sbjct: 389 gcccactggttctcacggcgaacttcctcctcctcctcaggtgtaaagtcattcttgatg 448
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| |||||||| | ||| || ||||| ||||| |||||||||||||| |||||||||||
Sbjct: 449 ttaaaggtcttcctaatttcctctggagtctttcccttgatcatgtctgcaacagtctgg 508
Query: 467 caggtcaggtcgagcagacccttgatgttcagatagtttgcagccaa 513
|| |||||||| |||| |||||||||||||||||||| || |||||
Sbjct: 509 catgtcaggtccagcaagcccttgatgttcagatagttggccgccaa 555
>gb|CV237185.1|CV237185 WS01226.B21_K13 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01226_K13 3', mRNA sequence
Length = 854
Score = 149 bits (75), Expect = 2e-034
Identities = 144/167 (86%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
|||||||||||||| | ||| | ||||| ||||||||||| || |||||||||||||||
Sbjct: 340 gcccactggttctcacggcgaacttcctcctcctcctcaggtgtaaagtcattcttgatg 399
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| |||||||| | ||| || ||||| ||||| |||||||||||||| |||||||||||
Sbjct: 400 ttaaaggtcttcctaatttcctctggagtctttcccttgatcatgtctgcaacagtctgg 459
Query: 467 caggtcaggtcgagcagacccttgatgttcagatagtttgcagccaa 513
|| |||||||| |||| |||||||||||||||||||| || |||||
Sbjct: 460 catgtcaggtccagcaagcccttgatgttcagatagttggccgccaa 506
>gb|CV249233.1|CV249233 WS01123.B21_H06 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01123_H06 3', mRNA sequence
Length = 730
Score = 149 bits (75), Expect = 2e-034
Identities = 144/167 (86%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
|||||||||||||| | ||| | ||||| ||||||||||| || |||||||||||||||
Sbjct: 248 gcccactggttctcacggcgaacttcctcctcctcctcaggtgtaaagtcattcttgatg 307
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| |||||||| | ||| || ||||| ||||| |||||||||||||| |||||||||||
Sbjct: 308 ttaaaggtcttcctaatttcctctggagtctttcccttgatcatgtctgcaacagtctgg 367
Query: 467 caggtcaggtcgagcagacccttgatgttcagatagtttgcagccaa 513
|| |||||||| |||| |||||||||||||||||||| || |||||
Sbjct: 368 catgtcaggtccagcaagcccttgatgttcagatagttggccgccaa 414
>gb|CV252980.1|CV252980 PX0019.B21.1_L17 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0019_L17 3', mRNA sequence
Length = 733
Score = 149 bits (75), Expect = 2e-034
Identities = 144/167 (86%)
Strand = Plus / Plus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
|||||||||||||| | ||| | ||||| ||||||||||| || |||||||||||||||
Sbjct: 220 gcccactggttctcacggcgaacttcctcctcctcctcaggtgtaaagtcattcttgatg 279
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| |||||||| | ||| || ||||| ||||| |||||||||||||| |||||||||||
Sbjct: 280 ttaaaggtcttcctaatttcctctggagtctttcccttgatcatgtctgcaacagtctgg 339
Query: 467 caggtcaggtcgagcagacccttgatgttcagatagtttgcagccaa 513
|| |||||||| |||| |||||||||||||||||||| || |||||
Sbjct: 340 catgtcaggtccagcaagcccttgatgttcagatagttggccgccaa 386
>gb|DT472589.1|DT472589 WS01226.BR_K13 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01226_K13 5', mRNA sequence
Length = 883
Score = 149 bits (75), Expect = 2e-034
Identities = 144/167 (86%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
|||||||||||||| | ||| | ||||| ||||||||||| || |||||||||||||||
Sbjct: 545 gcccactggttctcacggcgaacttcctcctcctcctcaggtgtaaagtcattcttgatg 486
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| |||||||| | ||| || ||||| ||||| |||||||||||||| |||||||||||
Sbjct: 485 ttaaaggtcttcctaatttcctctggagtctttcccttgatcatgtctgcaacagtctgg 426
Query: 467 caggtcaggtcgagcagacccttgatgttcagatagtttgcagccaa 513
|| |||||||| |||| |||||||||||||||||||| || |||||
Sbjct: 425 catgtcaggtccagcaagcccttgatgttcagatagttggccgccaa 379
>gb|DT493789.1|DT493789 WS01116.BR_H08 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01116_H08 5', mRNA sequence
Length = 741
Score = 149 bits (75), Expect = 2e-034
Identities = 144/167 (86%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
|||||||||||||| | ||| | ||||| ||||||||||| || |||||||||||||||
Sbjct: 544 gcccactggttctcacggcgaacttcctcctcctcctcaggtgtaaagtcattcttgatg 485
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| |||||||| | ||| || ||||| ||||| |||||||||||||| |||||||||||
Sbjct: 484 ttaaaggtcttcctaatttcctctggagtctttcccttgatcatgtctgcaacagtctgg 425
Query: 467 caggtcaggtcgagcagacccttgatgttcagatagtttgcagccaa 513
|| |||||||| |||| |||||||||||||||||||| || |||||
Sbjct: 424 catgtcaggtccagcaagcccttgatgttcagatagttggccgccaa 378
>gb|DT496452.1|DT496452 WS01123.BR_H06 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01123_H06 5', mRNA sequence
Length = 790
Score = 149 bits (75), Expect = 2e-034
Identities = 144/167 (86%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
|||||||||||||| | ||| | ||||| ||||||||||| || |||||||||||||||
Sbjct: 543 gcccactggttctcacggcgaacttcctcctcctcctcaggtgtaaagtcattcttgatg 484
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| |||||||| | ||| || ||||| ||||| |||||||||||||| |||||||||||
Sbjct: 483 ttaaaggtcttcctaatttcctctggagtctttcccttgatcatgtctgcaacagtctgg 424
Query: 467 caggtcaggtcgagcagacccttgatgttcagatagtttgcagccaa 513
|| |||||||| |||| |||||||||||||||||||| || |||||
Sbjct: 423 catgtcaggtccagcaagcccttgatgttcagatagttggccgccaa 377
>gb|DT500707.1|DT500707 PX0019.BR.1_L17 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0019_L17 5', mRNA sequence
Length = 598
Score = 149 bits (75), Expect = 2e-034
Identities = 144/167 (86%)
Strand = Plus / Minus
Query: 347 gcccactggttctccctgcggatctcctcttcctcctcaggggtgaagtcattcttgatg 406
|||||||||||||| | ||| | ||||| ||||||||||| || |||||||||||||||
Sbjct: 538 gcccactggttctcacggcgaacttcctcctcctcctcaggtgtaaagtcattcttgatg 479
Query: 407 ttgaaggtcttgcgaatctcttctggtgtcttgcccttgatcatgtcagcaacagtctga 466
|| |||||||| | ||| || ||||| ||||| |||||||||||||| |||||||||||
Sbjct: 478 ttaaaggtcttcctaatttcctctggagtctttcccttgatcatgtctgcaacagtctgg 419
Query: 467 caggtcaggtcgagcagacccttgatgttcagatagtttgcagccaa 513
|| |||||||| |||| |||||||||||||||||||| || |||||
Sbjct: 418 catgtcaggtccagcaagcccttgatgttcagatagttggccgccaa 372
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 94,674
Number of Sequences: 369679
Number of extensions: 94674
Number of successful extensions: 26710
Number of sequences better than 0.5: 169
Number of HSP's better than 0.5 without gapping: 168
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 26157
Number of HSP's gapped (non-prelim): 444
length of query: 955
length of database: 203,408,664
effective HSP length: 19
effective length of query: 936
effective length of database: 196,384,763
effective search space: 183816138168
effective search space used: 183816138168
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)