BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805139.2.3
(438 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AI161594.1|AI161594 A003P14U Hybrid aspen plasmid librar... 68 3e-010
gb|AI162943.1|AI162943 A027P41U Hybrid aspen plasmid librar... 68 3e-010
gb|BI130487.1|BI130487 G106P31Y Populus cambium cDNA librar... 68 3e-010
gb|CF227807.1|CF227807 PtaXM0004H3H0315 Poplar cDNA library... 68 3e-010
gb|CF230497.1|CF230497 PtaC0009B11B1103 Poplar cDNA library... 68 3e-010
gb|CF232794.1|CF232794 PtaJXO0015H5H0515 Poplar cDNA librar... 68 3e-010
gb|CF234885.1|CF234885 PtaJXT0016C7C0705 Poplar cDNA librar... 68 3e-010
gb|CF236473.1|CF236473 PtaJXT3C2C0206 Poplar cDNA library f... 68 3e-010
gb|CF237157.1|CF237157 Ptajxtjxt2G2G0214 Poplar cDNA librar... 68 3e-010
gb|AJ779063.1|AJ779063 AJ779063 Populus euphratica cambium ... 68 3e-010
gb|CV249012.1|CV249012 WS01122.B21_L21 PT-P-FL-A-2 Populus ... 68 3e-010
gb|CV275792.1|CV275792 WS0177.B21_K03 PTxD-NR-A-8 Populus t... 68 3e-010
gb|DT496208.1|DT496208 WS01122.BR_L21 PT-P-FL-A-2 Populus t... 68 3e-010
gb|DT498959.1|DT498959 WS0116.BR_N13 PT-P-FL-A-2 Populus tr... 68 3e-010
gb|DT499621.1|DT499621 WS0118.BR_N06 PT-P-FL-A-2 Populus tr... 68 3e-010
gb|CF227630.1|CF227630 PtaXM0002E2E0210 Poplar cDNA library... 60 7e-008
gb|BI127325.1|BI127325 G058P68Y Populus cambium cDNA librar... 52 2e-005
gb|BI127701.1|BI127701 G064P56Y Populus cambium cDNA librar... 52 2e-005
gb|BI128111.1|BI128111 G070P94Y Populus cambium cDNA librar... 52 2e-005
gb|BI129316.1|BI129316 G089P01Y Populus cambium cDNA librar... 52 2e-005
gb|BI131598.1|BI131598 G123P10Y Populus cambium cDNA librar... 52 2e-005
gb|BU895202.1|BU895202 X020F05 Populus wood cDNA library Po... 52 2e-005
gb|BU895327.1|BU895327 X022E11 Populus wood cDNA library Po... 52 2e-005
gb|BU895812.1|BU895812 X031D06 Populus wood cDNA library Po... 52 2e-005
gb|BU896291.1|BU896291 X038E03 Populus wood cDNA library Po... 52 2e-005
gb|BU898117.1|BU898117 X075A09 Populus wood cDNA library Po... 52 2e-005
gb|CF228514.1|CF228514 PtaXM0013H9H0915 Poplar cDNA library... 52 2e-005
gb|CF228523.1|CF228523 PtaXM0014B11B1103 Poplar cDNA librar... 52 2e-005
gb|CF229799.1|CF229799 PtaXM0029H12H1216 Poplar cDNA librar... 52 2e-005
gb|CF235176.1|CF235176 PtaJXT0019G11G1113 Poplar cDNA libra... 52 2e-005
gb|CF235233.1|CF235233 PtaJXT0020D1D0107 Poplar cDNA librar... 52 2e-005
gb|CF236101.1|CF236101 PtaJXT0030F3F0311 Poplar cDNA librar... 52 2e-005
gb|CF236275.1|CF236275 PtaJXT10G9G0913 Poplar cDNA library ... 52 2e-005
gb|CK102262.1|CK102262 G070P94.5pR Populus tension wood cDN... 52 2e-005
gb|CK102633.1|CK102633 G085P54.5pR Populus tension wood cDN... 52 2e-005
gb|CK107877.1|CK107877 G058P68 Populus tension wood cDNA li... 52 2e-005
gb|CV225351.1|CV225351 WS0161.B21_C06 PT-DX-A-7 Populus tri... 52 2e-005
gb|CV225603.1|CV225603 WS0161.B21_O01 PT-DX-A-7 Populus tri... 52 2e-005
gb|CV225965.1|CV225965 WS0162.B21_O08 PT-DX-A-7 Populus tri... 52 2e-005
gb|CV229012.1|CV229012 WS01911.B21_P06 PT-DX-N-A-10 Populus... 52 2e-005
gb|CV235549.1|CV235549 WS0122.B21_J06 PT-GT-FL-A-3 Populus ... 52 2e-005
gb|CV246518.1|CV246518 WS01110.B21_N12 PT-P-FL-A-2 Populus ... 52 2e-005
gb|CV247091.1|CV247091 WS01116.B21_P16 PT-P-FL-A-2 Populus ... 52 2e-005
gb|CV248582.1|CV248582 WS01121.B21_E05 PT-P-FL-A-2 Populus ... 52 2e-005
gb|CV249436.1|CV249436 WS01124.B21_C10 PT-P-FL-A-2 Populus ... 52 2e-005
gb|CV250149.1|CV250149 WS01126.B21_I20 PT-P-FL-A-2 Populus ... 52 2e-005
gb|CV267018.1|CV267018 WS02030.B21_J15 PTxN-IB-N-A-11 Popul... 52 2e-005
gb|DT470104.1|DT470104 WS01919.C21_O05 PT-DX-N-A-10 Populus... 52 2e-005
gb|DT471943.1|DT471943 WS0122.BR_J06 PT-GT-FL-A-3 Populus t... 52 2e-005
gb|DT495708.1|DT495708 WS01121.BR_E05 PT-P-FL-A-2 Populus t... 52 2e-005
gb|DT496684.1|DT496684 WS01124.BR_C10 PT-P-FL-A-2 Populus t... 52 2e-005
gb|DT497463.1|DT497463 WS01126.BR_I20 PT-P-FL-A-2 Populus t... 52 2e-005
gb|AI163386.1|AI163386 A040P80U Hybrid aspen plasmid librar... 50 7e-005
gb|CF235707.1|CF235707 PtaJXT0026B11B1103 Poplar cDNA libra... 50 7e-005
gb|CF237292.1|CF237292 Ptajxtjxt4D10D1008 Poplar cDNA libra... 50 7e-005
gb|CF237302.1|CF237302 Ptajxtjxt4D9D0907 Poplar cDNA librar... 50 7e-005
gb|CN519236.1|CN519236 GQ0104.B3_D02 GQ010 Populus trichoca... 50 7e-005
gb|CV249414.1|CV249414 WS01124.B21_B03 PT-P-FL-A-2 Populus ... 50 7e-005
gb|CF936681.1|CF936681 PO3008H11 Populus tomentiglandulosa ... 50 7e-005
gb|CF936757.1|CF936757 PO3009H07 Populus tomentiglandulosa ... 50 7e-005
gb|DT496662.1|DT496662 WS01124.BR_B03 PT-P-FL-A-2 Populus t... 50 7e-005
gb|BI129071.1|BI129071 G085P54Y Populus cambium cDNA librar... 48 3e-004
gb|CF235760.1|CF235760 PtaJXT0026F6F0612 Poplar cDNA librar... 48 3e-004
gb|CK108340.1|CK108340 GO85P54 Populus tension wood cDNA li... 48 3e-004
gb|BI127517.1|BI127517 G061P75Y Populus cambium cDNA librar... 46 0.001
gb|BI128432.1|BI128432 G075P83Y Populus cambium cDNA librar... 44 0.004
gb|BU894709.1|BU894709 X013F04 Populus wood cDNA library Po... 44 0.004
gb|CF228385.1|CF228385 PtaXM0012D11D1107 Poplar cDNA librar... 44 0.004
gb|CF228458.1|CF228458 PtaXM0013C1C0105 Poplar cDNA library... 44 0.004
gb|CF228743.1|CF228743 PtaXM0016H2H0216 Poplar cDNA library... 44 0.004
gb|CF234221.1|CF234221 PtaJXO4A11A1101 Poplar cDNA library ... 44 0.004
gb|CF234834.1|CF234834 PtaJXT0015F8F0812 Poplar cDNA librar... 44 0.004
gb|CF236106.1|CF236106 PtaJXT0030F8F0812 Poplar cDNA librar... 44 0.004
gb|CN549899.1|CN549899 GQ0242.B3_K05 GQ024 Populus trichoca... 44 0.004
gb|CV235984.1|CV235984 WS01222.B21_G02 PT-GT-FL-A-3 Populus... 44 0.004
gb|AI162753.1|AI162753 A023P17U Hybrid aspen plasmid librar... 42 0.017
gb|BI129342.1|BI129342 G089P41Y Populus cambium cDNA librar... 42 0.017
gb|BU885608.1|BU885608 R033F04 Populus root cDNA library Po... 42 0.017
gb|CF230725.1|CF230725 PtaC0012C12C1206 Poplar cDNA library... 42 0.017
gb|CF235212.1|CF235212 PtaJXT0020B2B0204 Poplar cDNA librar... 42 0.017
gb|CF235782.1|CF235782 PtaJXT0026H5H0515 Poplar cDNA librar... 42 0.017
gb|CF236568.1|CF236568 PtaJXT4D4D0408 Poplar cDNA library f... 42 0.017
gb|CN550295.1|CN550295 GQ0244.B3_H15 GQ024 Populus trichoca... 42 0.017
gb|CK318742.1|CK318742 X9P02h02 Populus stem seasonal libra... 42 0.017
gb|CV230367.1|CV230367 WS01916.B21_E23 PT-DX-N-A-10 Populus... 42 0.017
gb|CV249604.1|CV249604 WS01124.B21_L17 PT-P-FL-A-2 Populus ... 42 0.017
gb|CV251046.1|CV251046 WS0115.B21_K17 PT-P-FL-A-2 Populus t... 42 0.017
gb|CV254810.1|CV254810 WS02411.B21_D24 PTxD-ICC-N-A-14 Popu... 42 0.017
gb|CV265606.1|CV265606 WS02027.B21_L22 PTxN-IB-N-A-11 Popul... 42 0.017
gb|CV267780.1|CV267780 WS02032.B21_K20 PTxN-IB-N-A-11 Popul... 42 0.017
gb|CX178269.1|CX178269 F02_45-106_12.ab1 leaf inoculated wi... 42 0.017
gb|DT496851.1|DT496851 WS01124.BR_L17 PT-P-FL-A-2 Populus t... 42 0.017
gb|DT498550.1|DT498550 WS0115.BR_K17 PT-P-FL-A-2 Populus tr... 42 0.017
gb|DT499153.1|DT499153 WS0117.BR_H10 PT-P-FL-A-2 Populus tr... 42 0.017
dbj|AB079510.1| Populus kitakamiensis Pklim1 mRNA for trans... 42 0.017
dbj|AB079511.1| Populus kitakamiensis Pklim1 gene for trans... 42 0.017
gb|CF216302.1|CF216302 PT1129 Hybrid aspen xylem up-regulat... 40 0.068
gb|CF234358.1|CF234358 Ptajxojxo1F12F1212 Poplar cDNA libra... 40 0.068
>gb|AI161594.1|AI161594 A003P14U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 707
Score = 67.9 bits (34), Expect = 3e-010
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| |||| ||||||||||| |||||||||||||||||
Sbjct: 319 ggatagacagtcttggtgcacccaacacatttttctctggtgccagcaaa 270
>gb|AI162943.1|AI162943 A027P41U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 439
Score = 67.9 bits (34), Expect = 3e-010
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| |||| ||||||||||| |||||||||||||||||
Sbjct: 118 ggatagacagtcttgttgcacccaacacatttttctctggtgccagcaaa 69
>gb|BI130487.1|BI130487 G106P31Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 501
Score = 67.9 bits (34), Expect = 3e-010
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| |||| ||||||||||| |||||||||||||||||
Sbjct: 413 ggatagacagtcttgttgcacccaacacatttttctctggtgccagcaaa 364
>gb|CF227807.1|CF227807 PtaXM0004H3H0315 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 606
Score = 67.9 bits (34), Expect = 3e-010
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| |||| ||||||||||| |||||||||||||||||
Sbjct: 473 ggatagacagtcttgttgcacccaacacatttttctctggtgccagcaaa 424
>gb|CF230497.1|CF230497 PtaC0009B11B1103 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 67.9 bits (34), Expect = 3e-010
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| |||| ||||||||||| |||||||||||||||||
Sbjct: 468 ggatagacagtcttgttgcacccaacacatttttctctggtgccagcaaa 419
>gb|CF232794.1|CF232794 PtaJXO0015H5H0515 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 726
Score = 67.9 bits (34), Expect = 3e-010
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| |||| ||||||||||| |||||||||||||||||
Sbjct: 297 ggatagacagtcttgttgcacccaacacatttttctctggtgccagcaaa 248
>gb|CF234885.1|CF234885 PtaJXT0016C7C0705 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 67.9 bits (34), Expect = 3e-010
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| |||| ||||||||||| |||||||||||||||||
Sbjct: 470 ggatagacagtcttgttgcacccaacacatttttctctggtgccagcaaa 421
>gb|CF236473.1|CF236473 PtaJXT3C2C0206 Poplar cDNA library from young tension xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 752
Score = 67.9 bits (34), Expect = 3e-010
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| |||| ||||||||||| |||||||||||||||||
Sbjct: 471 ggatagacagtcttgttgcacccaacacatttttctctggtgccagcaaa 422
>gb|CF237157.1|CF237157 Ptajxtjxt2G2G0214 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 681
Score = 67.9 bits (34), Expect = 3e-010
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| |||| ||||||||||| |||||||||||||||||
Sbjct: 473 ggatagacagtcttgttgcacccaacacatttttctctggtgccagcaaa 424
>gb|AJ779063.1|AJ779063 AJ779063 Populus euphratica cambium 3-6 months Populus euphratica
cDNA clone P0000600010F07F1, mRNA sequence
Length = 655
Score = 67.9 bits (34), Expect = 3e-010
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| |||| ||||||||||| |||||||||||||||||
Sbjct: 172 ggatagacagtcttgttgcacccaacacatttttctctggtgccagcaaa 123
>gb|CV249012.1|CV249012 WS01122.B21_L21 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01122_L21 3', mRNA sequence
Length = 607
Score = 67.9 bits (34), Expect = 3e-010
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| |||| ||||||||||| |||||||||||||||||
Sbjct: 496 ggatagacagtcttgttgcacccaacacatttttctctggtgccagcaaa 545
>gb|CV275792.1|CV275792 WS0177.B21_K03 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0177_K03 3', mRNA sequence
Length = 875
Score = 67.9 bits (34), Expect = 3e-010
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| |||| ||||||||||| |||||||||||||||||
Sbjct: 449 ggatagacagtcttgttgcacccaacacatttttctctggtgccagcaaa 400
>gb|DT496208.1|DT496208 WS01122.BR_L21 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01122_L21 5', mRNA sequence
Length = 926
Score = 67.9 bits (34), Expect = 3e-010
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| |||| ||||||||||| |||||||||||||||||
Sbjct: 460 ggatagacagtcttgttgcacccaacacatttttctctggtgccagcaaa 411
>gb|DT498959.1|DT498959 WS0116.BR_N13 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0116_N13
5', mRNA sequence
Length = 642
Score = 67.9 bits (34), Expect = 3e-010
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| |||| ||||||||||| |||||||||||||||||
Sbjct: 460 ggatagacagtcttgttgcacccaacacatttttctctggtgccagcaaa 411
>gb|DT499621.1|DT499621 WS0118.BR_N06 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0118_N06
5', mRNA sequence
Length = 655
Score = 67.9 bits (34), Expect = 3e-010
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| |||| ||||||||||| |||||||||||||||||
Sbjct: 460 ggatagacagtcttgttgcacccaacacatttttctctggtgccagcaaa 411
>gb|CF227630.1|CF227630 PtaXM0002E2E0210 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 489
Score = 60.0 bits (30), Expect = 7e-008
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| |||| ||||||||||| ||| |||||||||||||
Sbjct: 473 ggatagacagtcttgttgcacccaacacatttttctgtggtgccagcaaa 424
>gb|BI127325.1|BI127325 G058P68Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 531
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 175 ggatagacagtcttgtcgcaacctacacatttttctctggtgccagcaaa 126
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 280 ccctcatgtgcaatgtagttagacgggcttatagtacagcctccatgggtacacttaaaa 221
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 220 cagctcctgtggta 207
>gb|BI127701.1|BI127701 G064P56Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 434
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 389 ggatagacagtcttgtcgcaacctacacatttttctctggtgccagcaaa 340
>gb|BI128111.1|BI128111 G070P94Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 528
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 406 ggatagacagtcttgtcgcaacctacacatttttctctggtgccagcaaa 357
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 511 ccctcatgtgcaatgtagttagacgggcttatagtacagcctccatgggtacacttaaaa 452
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 451 cagctcctgtggta 438
>gb|BI129316.1|BI129316 G089P01Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 442
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 363 ggatagacagtcttgtcgcaacctacacatttttctctggtgccagcaaa 314
>gb|BI131598.1|BI131598 G123P10Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 464
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 433 ggatagacagtcttgtcgcaacctacacatttttctctggtgccagcaaa 384
>gb|BU895202.1|BU895202 X020F05 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 673
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 434 ggatagacagtcttgtcgcaacctacacatttttctctggtgccagcaaa 385
Score = 40.1 bits (20), Expect = 0.068
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatgg 56
||||| || |||||||||||||| ||||| || || || |||||||||
Sbjct: 539 ccctcatgtgcaatgtagttagacgggcttatagtacagcctccatgg 492
>gb|BU895327.1|BU895327 X022E11 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 616
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 451 ggatagacagtcttgtcgcaacctacacatttttctctggtgccagcaaa 402
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 556 ccctcatgtgcaatgtagttagacgggcttatagtacagcctccatgggtacacttaaaa 497
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 496 cagctcctgtggta 483
>gb|BU895812.1|BU895812 X031D06 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 627
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 449 ggatagacagtcttgtcgcaacctacacatttttctctggtgccagcaaa 400
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 554 ccctcatgtgcaatgtagttagacgggcttatagtacagcctccatgggtacacttaaaa 495
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 494 cagctcctgtggta 481
>gb|BU896291.1|BU896291 X038E03 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 723
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 444 ggatagacagtcttgtcgcaacctacacatttttctctggtgccagcaaa 395
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 549 ccctcatgtgcaatgtagttagacgggcttatagtacagcctccatgggtacacttaaaa 490
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 489 cagctcctgtggta 476
>gb|BU898117.1|BU898117 X075A09 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 578
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 448 ggatagacagtcttgtcgcaacctacacatttttctctggtgccagcaaa 399
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 553 ccctcatgtgcaatgtagttagacgggcttatagtacagcctccatgggtacacttaaaa 494
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 493 cagctcctgtggta 480
>gb|CF228514.1|CF228514 PtaXM0013H9H0915 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 751
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 444 ggatagacagtcttgtcgcagcctacacatttttctctggtgccagcaaa 395
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 549 ccctcatgtgcaatgtagttagatgggcttatagtacagcctccatgggtacacttaaaa 490
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 489 cagctcctgtggta 476
>gb|CF228523.1|CF228523 PtaXM0014B11B1103 Poplar cDNA library from mature xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 763
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 371 ggatagacagtcttgtcgcagcctacacatttttctctggtgccagcaaa 322
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 476 ccctcatgtgcaatgtagttagacgggcttatagtacagcctccatgggtacacttaaaa 417
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 416 cagctcctgtggta 403
>gb|CF229799.1|CF229799 PtaXM0029H12H1216 Poplar cDNA library from mature xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 633
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 441 ggatagacagtcttgtcgcagcctacacatttttctctggtgccagcaaa 392
>gb|CF235176.1|CF235176 PtaJXT0019G11G1113 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 441 ggatagacagtcttgtcgcagcctacacatttttctctggtgccagcaaa 392
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 546 ccctcatgtgcaatgtagttagatgggcttatagtacagcctccatgggtacacttaaaa 487
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 486 cagctcctgtggta 473
>gb|CF235233.1|CF235233 PtaJXT0020D1D0107 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 371 ggatagacagtcttgtcgcagcctacacatttttctctggtgccagcaaa 322
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 476 ccctcatgtgcaatgtagttagatgggcttatagtacagcctccatgggtacacttaaaa 417
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 416 cagctcctgtggta 403
>gb|CF236101.1|CF236101 PtaJXT0030F3F0311 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 622
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 440 ggatagacagtcttgtcgcagcctacacatttttctctggtgccagcaaa 391
>gb|CF236275.1|CF236275 PtaJXT10G9G0913 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 606
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 82 ggatagacagtcttgtcgcagcctacacatttttctctggtgccagcaaa 33
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 187 ccctcatgtgcaatgtagttagatgggcttatagtacagcctccatgggtacacttaaaa 128
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 127 cagctcctgtggta 114
>gb|CK102262.1|CK102262 G070P94.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G070P94 5', mRNA sequence
Length = 544
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 406 ggatagacagtcttgtcgcaacctacacatttttctctggtgccagcaaa 357
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 511 ccctcatgtgcaatgtagttagacgggcttatagtacagcctccatgggtacacttaaaa 452
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 451 cagctcctgtggta 438
>gb|CK102633.1|CK102633 G085P54.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G085P54 5', mRNA sequence
Length = 606
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 474 ggatagacagtcttgtcgcaacctacacatttttctctggtgccagcaaa 425
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 579 ccctcatgtgcaatgtagttagacgggcttatagtacagcctccatgggtacacttaaaa 520
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 519 cagctcctgtggta 506
>gb|CK107877.1|CK107877 G058P68 Populus tension wood cDNA library Populus tremula x Populus
tremuloides cDNA clone G058P68 5', mRNA sequence
Length = 624
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 175 ggatagacagtcttgtcgcaacctacacatttttctctggtgccagcaaa 126
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 280 ccctcatgtgcaatgtagttagacgggcttatagtacagcctccatgggtacacttaaaa 221
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 220 cagctcctgtggta 207
>gb|CV225351.1|CV225351 WS0161.B21_C06 PT-DX-A-7 Populus trichocarpa cDNA clone WS0161_C06
3', mRNA sequence
Length = 639
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 535 ggatagacagtcttgtcgcagcctacacatttttctctggtgccagcaaa 584
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 430 ccctcatgtgcaatgtagttagatgggcttatagtacaacctccatgggtacacttaaaa 489
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 490 cagctcctgtggta 503
>gb|CV225603.1|CV225603 WS0161.B21_O01 PT-DX-A-7 Populus trichocarpa cDNA clone WS0161_O01
3', mRNA sequence
Length = 595
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 483 ggatagacagtcttgtcgcagcctacacatttttctctggtgccagcaaa 532
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 378 ccctcatgtgcaatgtagttagatgggcttatagtacaacctccatgggtacacttaaaa 437
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 438 cagctcctgtggta 451
>gb|CV225965.1|CV225965 WS0162.B21_O08 PT-DX-A-7 Populus trichocarpa cDNA clone WS0162_O08
3', mRNA sequence
Length = 797
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 418 ggatagacagtcttgtcgcagcctacacatttttctctggtgccagcaaa 369
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 523 ccctcatgtgcaatgtagttagatgggcttatagtacaacctccatgggtacacttaaaa 464
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 463 cagctcctgtggta 450
>gb|CV229012.1|CV229012 WS01911.B21_P06 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01911_P06 3', mRNA sequence
Length = 549
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 436 ggatagacagtcttgtcgcagcctacacatttttctctggtgccagcaaa 485
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 331 ccctcatgtgcaatgtagttagatgggcttatagtacaacctccatgggtacacttaaaa 390
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 391 cagctcctgtggta 404
>gb|CV235549.1|CV235549 WS0122.B21_J06 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0122_J06 3', mRNA sequence
Length = 643
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 533 ggatagacagtcttgtcgcagcctacacatttttctctggtgccagcaaa 582
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 428 ccctcatgtgcaatgtagttagatgggcttatagtacaacctccatgggtacacttaaaa 487
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 488 cagctcctgtggta 501
>gb|CV246518.1|CV246518 WS01110.B21_N12 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01110_N12 3', mRNA sequence
Length = 730
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 535 ggatagacagtcttgtcgcagcctacacatttttctctggtgccagcaaa 584
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 430 ccctcatgtgcaatgtagttagatgggcttatagtacaacctccatgggtacacttaaaa 489
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 490 cagctcctgtggta 503
>gb|CV247091.1|CV247091 WS01116.B21_P16 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01116_P16 3', mRNA sequence
Length = 696
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 530 ggatagacagtcttgtcgcagcctacacatttttctctggtgccagcaaa 579
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 425 ccctcatgtgcaatgtagttagatgggcttatagtacaacctccatgggtacacttaaaa 484
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 485 cagctcctgtggta 498
>gb|CV248582.1|CV248582 WS01121.B21_E05 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01121_E05 3', mRNA sequence
Length = 683
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 530 ggatagacagtcttgtcgcagcctacacatttttctctggtgccagcaaa 579
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 425 ccctcatgtgcaatgtagttagatgggcttatagtacaacctccatgggtacacttaaaa 484
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 485 cagctcctgtggta 498
>gb|CV249436.1|CV249436 WS01124.B21_C10 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01124_C10 3', mRNA sequence
Length = 612
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 421 ggatagacagtcttgtcgcagcctacacatttttctctggtgccagcaaa 470
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 316 ccctcatgtgcaatgtagttagatgggcttatagtacaacctccatgggtacacttaaaa 375
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 376 cagctcctgtggta 389
>gb|CV250149.1|CV250149 WS01126.B21_I20 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01126_I20 3', mRNA sequence
Length = 651
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 581 ggatagacagtcttgtcgcagcctacacatttttctctggtgccagcaaa 630
Score = 38.2 bits (19), Expect = 0.27
Identities = 34/39 (87%)
Strand = Plus / Plus
Query: 18 gcaatgtagttagaagggctgatggtgcaccctccatgg 56
|||||||||||||| ||||| || || || |||||||||
Sbjct: 484 gcaatgtagttagatgggcttatagtacaacctccatgg 522
>gb|CV267018.1|CV267018 WS02030.B21_J15 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02030_J15 3', mRNA sequence
Length = 966
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 471 ggatagacagtcttgtcgcagcctacacatttttctctggtgccagcaaa 520
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 366 ccctcatgtgcaatgtagttagatgggcttatagtacaacctccatgggtacacttaaaa 425
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 426 cagctcctgtggta 439
>gb|DT470104.1|DT470104 WS01919.C21_O05 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01919_O05 3', mRNA sequence
Length = 856
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 494 ggatagacagtcttgtcgcagcctacacatttttctctggtgccagcaaa 543
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 389 ccctcatgtgcaatgtagttagatgggcttatagtacaacctccatgggtacacttaaaa 448
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 449 cagctcctgtggta 462
>gb|DT471943.1|DT471943 WS0122.BR_J06 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0122_J06 5', mRNA sequence
Length = 696
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 444 ggatagacagtcttgtcgcagcctacacatttttctctggtgccagcaaa 395
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 549 ccctcatgtgcaatgtagttagatgggcttatagtacaacctccatgggtacacttaaaa 490
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 489 cagctcctgtggta 476
>gb|DT495708.1|DT495708 WS01121.BR_E05 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01121_E05 5', mRNA sequence
Length = 865
Score = 52.0 bits (26), Expect = 2e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 195 ggatagactgtcttgctgcatccaacacatttctctctggtgccagcaaa 244
|||||||| |||||| ||| || |||||||| |||||||||||||||||
Sbjct: 443 ggatagacagtcttgtcgcagcctacacatttttctctggtgccagcaaa 394
Score = 44.1 bits (22), Expect = 0.004
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 9 ccctcgtgcgcaatgtagttagaagggctgatggtgcaccctccatggcagcacttgaag 68
||||| || |||||||||||||| ||||| || || || ||||||||| ||||| ||
Sbjct: 548 ccctcatgtgcaatgtagttagatgggcttatagtacaacctccatgggtacacttaaaa 489
Query: 69 cagctcttgtggta 82
|||||| |||||||
Sbjct: 488 cagctcctgtggta 475
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 53,504
Number of Sequences: 369679
Number of extensions: 53504
Number of successful extensions: 14615
Number of sequences better than 0.5: 98
Number of HSP's better than 0.5 without gapping: 98
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 14433
Number of HSP's gapped (non-prelim): 181
length of query: 438
length of database: 203,408,664
effective HSP length: 18
effective length of query: 420
effective length of database: 196,754,442
effective search space: 82636865640
effective search space used: 82636865640
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)