BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804958.2.1
(1118 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU894173.1|BU894173 X003H07 Populus wood cDNA library Po... 270 1e-070
gb|BU812023.1|BU812023 UL91TD02 Populus leaf cDNA library P... 244 6e-063
gb|DV464201.1|DV464201 MTUNUL1.P24.D07 NUL Populus fremonti... 230 9e-059
gb|CV267224.1|CV267224 WS02031.B21_C18 PTxN-IB-N-A-11 Popul... 228 4e-058
gb|BU894661.1|BU894661 X012H09 Populus wood cDNA library Po... 224 6e-057
gb|BI127370.1|BI127370 G059P39Y Populus cambium cDNA librar... 218 3e-055
gb|CV231236.1|CV231236 WS0193.B21_O22 PT-DX-N-A-10 Populus ... 206 1e-051
gb|CK097248.1|CK097248 UB44DPH02.3pR Populus active cambium... 180 8e-044
gb|CV274847.1|CV274847 WS0174.B21.1_J06 PTxD-NR-A-8 Populus... 180 8e-044
gb|AJ772710.1|AJ772710 AJ772710 Populus euphratica shoot in... 172 2e-041
gb|DT516220.1|DT516220 WS02430.B21_L23 PTxD-ICC-N-A-14 Popu... 172 2e-041
gb|DV464515.1|DV464515 MTUNUL1.P28.E03 NUL Populus fremonti... 172 2e-041
gb|BU896276.1|BU896276 X038C04 Populus wood cDNA library Po... 167 1e-039
gb|BU896297.1|BU896297 X038E11 Populus wood cDNA library Po... 167 1e-039
gb|BU894478.1|BU894478 X010A02 Populus wood cDNA library Po... 163 2e-038
gb|CX171314.1|CX171314 G11_69-94_13.ab1 leaf inoculated wit... 163 2e-038
gb|BU880106.1|BU880106 UM41TE06 Populus flower cDNA library... 155 4e-036
gb|BU898140.1|BU898140 X075D09 Populus wood cDNA library Po... 155 4e-036
gb|CK099351.1|CK099351 A063P66.5pR Hybrid aspen plasmid lib... 155 4e-036
gb|BU835074.1|BU835074 T069C02 Populus apical shoot cDNA li... 149 3e-034
gb|AI166241.1|AI166241 a063p66u Hybrid aspen plasmid librar... 135 4e-030
gb|CV227387.1|CV227387 WS0167.B21_A17 PT-DX-A-7 Populus tri... 133 2e-029
gb|AJ772440.1|AJ772440 AJ772440 Populus euphratica shoot in... 131 6e-029
gb|CK117051.1|CK117051 B024P66 Hybrid aspen plasmid library... 129 2e-028
gb|CV269160.1|CV269160 WS0207.B21_H21 PTxN-IB-N-A-11 Populu... 123 2e-026
gb|BU887345.1|BU887345 R058B10 Populus root cDNA library Po... 121 6e-026
gb|BU891188.1|BU891188 P047A12 Populus petioles cDNA librar... 113 1e-023
gb|CV241850.1|CV241850 WS02513.B21_G18 PT-MB-N-A-15 Populus... 111 6e-023
gb|CK110333.1|CK110333 N055G06 Populus bark cDNA library Po... 109 2e-022
gb|CN519268.1|CN519268 GQ0103.B3_C13 GQ010 Populus trichoca... 109 2e-022
gb|BU811238.1|BU811238 UL81TG02 Populus leaf cDNA library P... 103 1e-020
gb|BU895787.1|BU895787 X031A06 Populus wood cDNA library Po... 98 9e-019
gb|CV276089.1|CV276089 WS0178.B21.1_J13 PTxD-NR-A-8 Populus... 98 9e-019
gb|CK100043.1|CK100043 B006P29.5pR Hybrid aspen plasmid lib... 90 2e-016
gb|DN488212.1|DN488212 R041G07.3pR Populus root cDNA librar... 90 2e-016
gb|DN500128.1|DN500128 UB48DPE03.5pR Populus active cambium... 86 3e-015
gb|CN524305.1|CN524305 GQ015M13.T3_E09 GQ015 Populus tricho... 82 5e-014
gb|BU819274.1|BU819274 UA41BPG08 Populus tremula cambium cD... 80 2e-013
gb|BU821132.1|BU821132 UB19CPE07 Populus tremula cambium cD... 80 2e-013
gb|AJ770191.1|AJ770191 AJ770191 Populus euphratica leaf 3-6... 78 8e-013
gb|CK096964.1|CK096964 UB34DPA12.3pR Populus active cambium... 76 3e-012
gb|AI164871.1|AI164871 A070P12U Hybrid aspen plasmid librar... 74 1e-011
gb|AI165414.1|AI165414 A083p48u Hybrid aspen plasmid librar... 74 1e-011
gb|BU818866.1|BU818866 UA35CPF05 Populus tremula cambium cD... 74 1e-011
gb|DN490157.1|DN490157 UB48DPE03.3pR Populus active cambium... 70 2e-010
gb|BU865267.1|BU865267 S051C12 Populus imbibed seed cDNA li... 66 3e-009
gb|BU865845.1|BU865845 S059E04 Populus imbibed seed cDNA li... 66 3e-009
gb|AJ773923.1|AJ773923 AJ773923 Populus euphratica shoot 3-... 66 3e-009
gb|CV228921.1|CV228921 WS01911.B21_K08 PT-DX-N-A-10 Populus... 66 3e-009
gb|CV270196.1|CV270196 WS0151.B21_F16 PTxN-IB-A-6 Populus t... 66 3e-009
gb|CV271647.1|CV271647 WS0155.B21_E13 PTxN-IB-A-6 Populus t... 66 3e-009
gb|CV274282.1|CV274282 WS0172.B21_M12 PTxD-NR-A-8 Populus t... 66 3e-009
gb|AI164988.1|AI164988 A072p19u Hybrid aspen plasmid librar... 58 8e-007
gb|BU886963.1|BU886963 R052G11 Populus root cDNA library Po... 58 8e-007
gb|BU890263.1|BU890263 P034B07 Populus petioles cDNA librar... 58 8e-007
gb|BU827321.1|BU827321 UK131TC05 Populus apical shoot cDNA ... 52 5e-005
gb|BU832778.1|BU832778 T038B06 Populus apical shoot cDNA li... 52 5e-005
gb|AJ777572.1|AJ777572 AJ777572 Populus euphratica root 3-6... 46 0.003
gb|DT480982.1|DT480982 WS02530.BR_I12 PT-MB-N-A-15 Populus ... 46 0.003
gb|DT486279.1|DT486279 WS02530.B21_I12 PT-MB-N-A-15 Populus... 46 0.003
gb|BI127913.1|BI127913 G068P04Y Populus cambium cDNA librar... 44 0.011
gb|CK088784.1|CK088784 A072P19.3pR Hybrid aspen plasmid lib... 44 0.011
gb|CV269757.1|CV269757 WS0209.B21_C16 PTxN-IB-N-A-11 Populu... 44 0.011
>gb|BU894173.1|BU894173 X003H07 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 618
Score = 270 bits (136), Expect = 1e-070
Identities = 447/551 (81%)
Strand = Plus / Plus
Query: 241 gggactgtctctggtggcatgatcagggagcttctcatatctttctggagggcaactgga 300
||||| || |||||||||||||||| ||| ||||||||||| ||| | |||||||| |||
Sbjct: 19 gggacagtgtctggtggcatgatcaaggaacttctcatatccttccgtagggcaaccgga 78
Query: 301 cagaaaccaaagaggatcatattctacagggatggcgtcagtgagggacaattctaccaa 360
||||| ||| || | || ||||||||||| ||||| |||||||| ||||| || || |||
Sbjct: 79 cagaagccacagcgaataatattctacagagatggtgtcagtgaaggacagttttatcaa 138
Query: 361 gttctgttgtatgaacttgatgccattagaaaggcctgtgcgtcattggagtctgactac 420
||| ||||||| ||||| ||||| ||| | ||||| ||||| || || ||| | | |||
Sbjct: 139 gttttgttgtacgaactcgatgctattcgtaaggcatgtgcttctttagagcccaattac 198
Query: 421 cagcctccagttacttttgtcgtggtccagnagcgtcatcacaccaggttgtttgctaat 480
|||||||| || || ||||| ||||| ||| ||||||||||||| ||| ||||||| |||
Sbjct: 199 cagcctcctgtgacatttgttgtggttcagaagcgtcatcacacaaggctgtttgcaaat 258
Query: 481 aatcacaatgataatcgtgctgtcgataaaagcgggaacatactgcctggcactgtggtg 540
||||| ||| ||||||| || | || ||||| ||| ||||||| ||||| |||
Sbjct: 259 gatcaccgtgaccgcagtgctgttgacaggagtgggaatatattgcctggtactgttgtg 318
Query: 541 gactcgaagatctgccatccaactgagtttgatttctacctgtgcagccatgctggcatt 600
|||||||||||||||||||| ||||| || || ||||| |||| || ||||| || |||
Sbjct: 319 gactcgaagatctgccatcctactgaattcgacttctatttgtgtagtcatgccgggatt 378
Query: 601 cagggaacaagccgccctgcccattaccatgttctgtgggatgagaacaactttacggct 660
||||| |||||||| || || || |||||||| || |||||||||||||| ||||| |||
Sbjct: 379 cagggcacaagccgtccagctcactaccatgtactttgggatgagaacaagtttactgct 438
Query: 661 gatgggttgcaaactctcaccaacaacttgtgttacacgtatgctaggtgcacacgctca 720
||||||||||| | || || ||||| |||| ||||| ||||| | ||||| || ||
Sbjct: 439 gatgggttgcagtccctgacaaacaatctgtgctacacatatgcacgatgcacgcgttct 498
Query: 721 gtatcgattgttcctcctgcatactatgctcacctggcagccttccgagctcggttctac 780
|| || ||||| || ||||||||||||||||| || || || || |||||||| ||||||
Sbjct: 499 gtttccattgtgccacctgcatactatgctcatcttgctgcatttcgagctcgtttctac 558
Query: 781 atggagccaga 791
||||| |||||
Sbjct: 559 atggaaccaga 569
>gb|BU812023.1|BU812023 UL91TD02 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 616
Score = 244 bits (123), Expect = 6e-063
Identities = 421/521 (80%)
Strand = Plus / Plus
Query: 271 cttctcatatctttctggagggcaactggacagaaaccaaagaggatcatattctacagg 330
||||||||||| ||| | |||||||| |||||||| ||| || | || |||||||||||
Sbjct: 5 cttctcatatccttccgtagggcaaccggacagaagccacagcgaataatattctacaga 64
Query: 331 gatggcgtcagtgagggacaattctaccaagttctgttgtatgaacttgatgccattaga 390
||||| |||||||| ||||| || || |||||| ||||||| ||||| ||||| ||| |
Sbjct: 65 gatggtgtcagtgaaggacagttttatcaagttttgttgtacgaactcgatgctattcgt 124
Query: 391 aaggcctgtgcgtcattggagtctgactaccagcctccagttacttttgtcgtggtccag 450
||||| ||||| || || ||| | | ||||||||||| || || ||||| ||||| |||
Sbjct: 125 aaggcatgtgcttctttagagcccaattaccagcctcctgtgacatttgttgtggttcag 184
Query: 451 nagcgtcatcacaccaggttgtttgctaataatcacaatgataatcgtgctgtcgataaa 510
||||||||||||| ||| ||||||| ||| ||||| ||| ||||||| || |
Sbjct: 185 aagcgtcatcacacaaggctgtttgcaaatgatcaccgtgaccgcagtgctgttgacagg 244
Query: 511 agcgggaacatactgcctggcactgtggtggactcgaagatctgccatccaactgagttt 570
|| ||||| ||| ||||||| ||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 245 agtgggaatatattgcctggtactgttgtggactcgaagatctgccatcctactgaattc 304
Query: 571 gatttctacctgtgcagccatgctggcattcagggaacaagccgccctgcccattaccat 630
|| ||||| |||| || ||||| || |||||||| |||||||| || || |||||||||
Sbjct: 305 gacttctatttgtgtagtcatgccgggattcagggcacaagccgtccggctcattaccat 364
Query: 631 gttctgtgggatgagaacaactttacggctgatgggttgcaaactctcaccaacaacttg 690
|| || |||||||||||||| ||||| |||||||||||||| | || || ||||| ||
Sbjct: 365 gtactttgggatgagaacaagtttactgctgatgggttgcagtccctgacaaacaatctg 424
Query: 691 tgttacacgtatgctaggtgcacacgctcagtatcgattgttcctcctgcatactatgct 750
|| ||||| ||||| | ||||| || || || || ||||| || |||||||||||||||
Sbjct: 425 tgctacacatatgcacgatgcacgcgttctgtttccattgtgccacctgcatactatgct 484
Query: 751 cacctggcagccttccgagctcggttctacatggagccaga 791
|| || || || || |||||||| |||||||||| |||||
Sbjct: 485 catcttgctgcatttcgagctcgtntctacatggaaccaga 525
>gb|DV464201.1|DV464201 MTUNUL1.P24.D07 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 867
Score = 230 bits (116), Expect = 9e-059
Identities = 352/431 (81%)
Strand = Plus / Plus
Query: 241 gggactgtctctggtggcatgatcagggagcttctcatatctttctggagggcaactgga 300
||||| || |||||||||||||||| ||| ||||||||||| ||| | |||||||| ||
Sbjct: 430 gggacagtgtctggtggcatgatcaaggaacttctcatatccttccgtagggcaaccggg 489
Query: 301 cagaaaccaaagaggatcatattctacagggatggcgtcagtgagggacaattctaccaa 360
||||| ||| || | || ||||||||||| ||||| |||||||| ||||| || || |||
Sbjct: 490 cagaagccacagcgaattatattctacagagatggtgtcagtgaaggacagttttatcaa 549
Query: 361 gttctgttgtatgaacttgatgccattagaaaggcctgtgcgtcattggagtctgactac 420
||| ||||||| ||||||||||| ||| | ||||| ||||| || || ||| | | |||
Sbjct: 550 gttttgttgtacgaacttgatgctattcgtaaggcatgtgcttctttagagcccaattac 609
Query: 421 cagcctccagttacttttgtcgtggtccagnagcgtcatcacaccaggttgtttgctaat 480
|||||||| || || ||||| ||||| ||| ||||||||||||| ||| ||||||| |||
Sbjct: 610 cagcctcctgtgacatttgttgtggttcagaagcgtcatcacactaggctgtttgcaaat 669
Query: 481 aatcacaatgataatcgtgctgtcgataaaagcgggaacatactgcctggcactgtggtg 540
||||| ||| |||||| || | || ||||| ||| ||||||| ||||| |||
Sbjct: 670 gatcaccgtgaccgcaatgctgttgacaggagtgggaatatattgcctggtactgttgtg 729
Query: 541 gactcgaagatctgccatccaactgagtttgatttctacctgtgcagccatgctggcatt 600
|||||||||||||||||||| ||||| || || ||||| |||| || || ||||| |||
Sbjct: 730 gactcgaagatctgccatcctactgaattcgacttctatttgtgtagtcacgctgggatt 789
Query: 601 cagggaacaagccgccctgcccattaccatgttctgtgggatgagaacaactttacggct 660
||||| |||||||| || || ||||||||||| || |||||||||||||| ||||| |||
Sbjct: 790 cagggcacaagccgtccagctcattaccatgtactttgggatgagaacaagtttactgct 849
Query: 661 gatgggttgca 671
|||||| ||||
Sbjct: 850 gatgggctgca 860
Score = 81.8 bits (41), Expect = 5e-014
Identities = 113/137 (82%)
Strand = Plus / Plus
Query: 55 actattatctttggtgctgatgtgacccatccccatcctggggaagattctagtccttcc 114
|||||||| |||||||||||||| || ||||| ||||||||||| || || || || ||
Sbjct: 244 actattatttttggtgctgatgttactcatcctcatcctggggaggactcaagcccatct 303
Query: 115 attgcagctgtggttgcttttcaagactggcctgaggttacaaagtatgcaggattggtg 174
|||||||| || || |||| ||||| ||||| |||||||| || ||||| || ||||
Sbjct: 304 attgcagccgtagtggcttcgcaagattggccagaggttaccaaatatgctggcctggtt 363
Query: 175 agtgctcaagcccatcg 191
||||||||||||||||
Sbjct: 364 tgtgctcaagcccatcg 380
>gb|CV267224.1|CV267224 WS02031.B21_C18 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02031_C18 3', mRNA sequence
Length = 960
Score = 228 bits (115), Expect = 4e-058
Identities = 381/470 (81%)
Strand = Plus / Minus
Query: 322 ttctacagggatggcgtcagtgagggacaattctaccaagttctgttgtatgaacttgat 381
|||||||| ||||| |||||||| ||||| || || |||||| ||||||| |||||||||
Sbjct: 928 ttctacagagatggtgtcagtgaaggacagttttatcaagttttgttgtacgaacttgat 869
Query: 382 gccattagaaaggcctgtgcgtcattggagtctgactaccagcctccagttacttttgtc 441
|| ||| | ||||| ||||| || || ||| | | ||||||||||| || || |||||
Sbjct: 868 gctattcgtaaggcatgtgcttctttagagcccaattaccagcctcctgtgacatttgtt 809
Query: 442 gtggtccagnagcgtcatcacaccaggttgtttgctaataatcacaatgataatcgtgct 501
||||| ||| ||||||||||||| ||| ||||||| ||| ||||| ||| ||||
Sbjct: 808 gtggttcagaagcgtcatcacacaaggctgtttgcaaatgatcaccgtgaccgcaatgct 749
Query: 502 gtcgataaaagcgggaacatactgcctggcactgtggtggactcgaagatctgccatcca 561
|| || | || ||||| ||| ||||||| ||||| |||||||||||||||||||||||
Sbjct: 748 gttgacaggagtgggaatatattgcctggtactgttgtggactcgaagatctgccatcct 689
Query: 562 actgagtttgatttctacctgtgcagccatgctggcattcagggaacaagccgccctgcc 621
||||| ||||| ||||| |||| || |||||||| |||||||| |||||||| || ||
Sbjct: 688 actgaatttgacttctatttgtgtagtcatgctgggattcagggcacaagccgtccagct 629
Query: 622 cattaccatgttctgtgggatgagaacaactttacggctgatgggttgcaaactctcacc 681
||||||||||| || |||||||||||||| ||||| ||||||||| |||| | || ||
Sbjct: 628 cattaccatgtactttgggatgagaacaagtttactgctgatgggctgcagtccctgaca 569
Query: 682 aacaacttgtgttacacgtatgctaggtgcacacgctcagtatcgattgttcctcctgca 741
||||| | || ||||| ||||| | ||||| || || || || ||||| || ||||||
Sbjct: 568 aacaatctttgctacacatatgcacgatgcacgcgatctgtttccattgtgccacctgca 509
Query: 742 tactatgctcacctggcagccttccgagctcggttctacatggagccaga 791
||||||||||| || || || || |||||||| |||||||||||||||||
Sbjct: 508 tactatgctcatcttgctgcatttcgagctcgtttctacatggagccaga 459
Score = 65.9 bits (33), Expect = 3e-009
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 868 aatgttgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctac 927
|||| |||||||||||| ||||||||| | ||||| || || |||||||| |||||||||
Sbjct: 367 aatgctgctgtgaggcctttacctgccttgaaggagaatgtcaagcgggttatgttctac 308
Query: 928 tgcta 932
|||||
Sbjct: 307 tgcta 303
>gb|BU894661.1|BU894661 X012H09 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 814
Score = 224 bits (113), Expect = 6e-057
Identities = 353/432 (81%), Gaps = 1/432 (0%)
Strand = Plus / Plus
Query: 241 gggactgtctctggtggcatgatcagggagcttctcatatctttctggagggcaactgga 300
||||| || |||||||||||||||| ||| ||||||||||| ||| | |||||||| |||
Sbjct: 343 gggacagtgtctggtggcatgatcaaggaacttctcatatccttccgtagggcaaccgga 402
Query: 301 cagaaaccaaagaggatcatattctacagggatggcgtcagtgagggacaattctaccaa 360
||||| ||| || | || ||||||||||| ||||| |||||||| ||||| || || |||
Sbjct: 403 cagaagccacagcgaataatattctacagagatggtgtcagtgaaggacagttttatcaa 462
Query: 361 gttctgttgtatgaacttgatgccattagaaaggcctgtgcgtcattggagtctgactac 420
||| ||||||| ||||| ||||| ||| | ||||| ||||| || || ||| | | |||
Sbjct: 463 gttttgttgtacgaactcgatgctattcgtaaggcatgtgcttctttagagcccaattac 522
Query: 421 cagcctccagttacttttgtcgtggtccagnagcgtcatcacacca-ggttgtttgctaa 479
|||||||| || || ||||| ||||| ||| ||||||||||||| | || ||||||| ||
Sbjct: 523 cagcctcctgtgacatttgttgtggttcagaagcgtcatcacacaagggctgtttgcaaa 582
Query: 480 taatcacaatgataatcgtgctgtcgataaaagcgggaacatactgcctggcactgtggt 539
| ||||| ||| ||||||| || | || ||||| ||| ||||||| ||||| ||
Sbjct: 583 tgatcaccgtgaccgcagtgctgttgacaggagtgggaatatattgcctggtactgttgt 642
Query: 540 ggactcgaagatctgccatccaactgagtttgatttctacctgtgcagccatgctggcat 599
||||||||||||||||||||| ||||| || || ||||| |||| || ||||| || ||
Sbjct: 643 ggactcgaagatctgccatcctactgaattcgacttctatttgtgtagtcatgccgggat 702
Query: 600 tcagggaacaagccgccctgcccattaccatgttctgtgggatgagaacaactttacggc 659
|||||| |||||||| || || ||||||||||| || ||||||||||||| ||||| ||
Sbjct: 703 tcagggcacaagccgtccggctcattaccatgtactttgggatgagaacatgtttactgc 762
Query: 660 tgatgggttgca 671
||||||||||||
Sbjct: 763 tgatgggttgca 774
Score = 73.8 bits (37), Expect = 1e-011
Identities = 112/137 (81%)
Strand = Plus / Plus
Query: 55 actattatctttggtgctgatgtgacccatccccatcctggggaagattctagtccttcc 114
|||||||| |||||||||||||| || ||||| ||||| ||||| || || || || ||
Sbjct: 157 actattatttttggtgctgatgttactcatcctcatcccggggaggactcaagcccatct 216
Query: 115 attgcagctgtggttgcttttcaagactggcctgaggttacaaagtatgcaggattggtg 174
|||||||| || || |||| ||||| ||||| |||||||| || ||||| || ||||
Sbjct: 217 attgcagccgttgtggcttcgcaagattggccagaggttaccaaatatgctggcctggtt 276
Query: 175 agtgctcaagcccatcg 191
||||||||||||||||
Sbjct: 277 tgtgctcaagcccatcg 293
>gb|BI127370.1|BI127370 G059P39Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 502
Score = 218 bits (110), Expect = 3e-055
Identities = 382/473 (80%)
Strand = Plus / Plus
Query: 319 atattctacagggatggcgtcagtgagggacaattctaccaagttctgttgtatgaactt 378
||||||||||| ||||| |||||||| ||||| || || |||||| ||||||| |||||
Sbjct: 17 atattctacagagatggtgtcagtgaaggacagttttatcaagttttgttgtacgaactc 76
Query: 379 gatgccattagaaaggcctgtgcgtcattggagtctgactaccagcctccagttactttt 438
||||| ||| | ||||| ||||| || || ||| | | ||||||||||| || || |||
Sbjct: 77 gatgctattcgtaaggcatgtgcttctttagagcccaattaccagcctcctgtgacattt 136
Query: 439 gtcgtggtccagnagcgtcatcacaccaggttgtttgctaataatcacaatgataatcgt 498
|| ||||| ||| ||||||||||||| ||| ||||||| ||| ||||| ||| ||
Sbjct: 137 gttgtggttcagaagcgtcatcacacaaggctgtttgcaaatgatcaccgtgaccgcagt 196
Query: 499 gctgtcgataaaagcgggaacatactgcctggcactgtggtggactcgaagatctgccat 558
||||| || | || ||||| ||| ||||||| ||||| |||||||||||||||||||||
Sbjct: 197 gctgttgacaggagtgggaatatattgcctggtactgttgtggactcgaagatctgccat 256
Query: 559 ccaactgagtttgatttctacctgtgcagccatgctggcattcagggaacaagccgccct 618
|| ||||| || || ||||| |||| || ||||| || |||||||| |||||||| ||
Sbjct: 257 cctactgaattcgacttctatttgtgtagtcatgccgggattcagggcacaagccgtcca 316
Query: 619 gcccattaccatgttctgtgggatgagaacaactttacggctgatgggttgcaaactctc 678
|| || |||||||| || |||||||||||||| ||||| |||||||||||||| | ||
Sbjct: 317 gctcactaccatgtactttgggatgagaacaagtttactgctgatgggttgcagtccctg 376
Query: 679 accaacaacttgtgttacacgtatgctaggtgcacacgctcagtatcgattgttcctcct 738
|| ||||| |||| ||||| ||||| | ||||| || || || || ||||| || |||
Sbjct: 377 acaaacaatctgtgctacacatatgcacgatgcacgcgttctgtttccattgtgccacct 436
Query: 739 gcatactatgctcacctggcagccttccgagctcggttctacatggagccaga 791
|||||||||||||| || || || || |||||||| ||||||||||| |||||
Sbjct: 437 gcatactatgctcatcttgctgcatttcgagctcgtttctacatggaaccaga 489
>gb|CV231236.1|CV231236 WS0193.B21_O22 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0193_O22 3', mRNA sequence
Length = 875
Score = 206 bits (104), Expect = 1e-051
Identities = 376/467 (80%)
Strand = Plus / Minus
Query: 319 atattctacagggatggcgtcagtgagggacaattctaccaagttctgttgtatgaactt 378
||||||||||| ||||| |||||||| || || ||||| |||||| ||||| | ||||||
Sbjct: 839 atattctacagagatggtgtcagtgaagggcagttctatcaagttttgttgcacgaactt 780
Query: 379 gatgccattagaaaggcctgtgcgtcattggagtctgactaccagcctccagttactttt 438
||||| ||| | ||||| ||||| || || ||| | |||||||||||||||| || |||
Sbjct: 779 gatgctattcgtaaggcatgtgcttctttagagcccaactaccagcctccagtgacattt 720
Query: 439 gtcgtggtccagnagcgtcatcacaccaggttgtttgctaataatcacaatgataatcgt 498
|| ||||| ||| ||||||||||||| ||| |||| || ||| ||||| ||| | |
Sbjct: 719 gttgtggttcagaagcgtcatcacacaaggctgttcgcaaatgatcaccgtgaccgtaat 660
Query: 499 gctgtcgataaaagcgggaacatactgcctggcactgtggtggactcgaagatctgccat 558
||||| || |||||||| ||| ||||||||||||| |||||||| || || || ||
Sbjct: 659 gctgttgaccggagcgggaatatattgcctggcactgtcgtggactcaaaaatttgtcac 600
Query: 559 ccaactgagtttgatttctacctgtgcagccatgctggcattcagggaacaagccgccct 618
||||| ||||| || ||||| |||| || |||||||| |||||||| |||||||| ||
Sbjct: 599 ccaacagagttcgacttctatttgtgtagtcatgctgggattcagggtacaagccgtcca 540
Query: 619 gcccattaccatgttctgtgggatgagaacaactttacggctgatgggttgcaaactctc 678
|| ||||||||||| || |||||||||||||| || || |||||||||||||| ||||
Sbjct: 539 gctcattaccatgtactttgggatgagaacaagttcactgctgatgggttgcagtctctt 480
Query: 679 accaacaacttgtgttacacgtatgctaggtgcacacgctcagtatcgattgttcctcct 738
|| ||||| | || ||||| ||||| || ||||| || || || || ||||| || |||
Sbjct: 479 acaaacaatctttgctacacatatgcaagatgcacgcgttctgtttccattgtgccacct 420
Query: 739 gcatactatgctcacctggcagccttccgagctcggttctacatgga 785
||||| ||||| || || || || ||||||||||| |||||||||||
Sbjct: 419 gcatattatgcacatcttgctgcattccgagctcgtttctacatgga 373
Score = 42.1 bits (21), Expect = 0.045
Identities = 48/57 (84%)
Strand = Plus / Minus
Query: 873 tgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctactg 929
|||||||||||| | |||||| | ||||| || || |||||||| |||||||||||
Sbjct: 270 tgctgtgaggcccctgcctgccttgaaggagaatgtcaagcgggttatgttctactg 214
>gb|CK097248.1|CK097248 UB44DPH02.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB44DPH02 3', mRNA sequence
Length = 762
Score = 180 bits (91), Expect = 8e-044
Identities = 377/470 (80%), Gaps = 2/470 (0%)
Strand = Plus / Minus
Query: 322 ttctacagggatggcgtcagtgagggacaattctaccaagttctgttgtatgaacttgat 381
|||||||| ||||| |||||||| || || ||||| |||||| ||| ||| |||||||||
Sbjct: 699 ttctacagagatggtgtcagtgaagggcagttctatcaagttttgt-gtacgaacttgat 641
Query: 382 gccattagaaaggcctgtgcgtcattggagtctgactaccagcctccagttacttttgtc 441
|| ||| | ||||| |||| || || ||| | |||||||||||||||| || |||||
Sbjct: 640 gctattcggaaggcatgtgtttc-ttagagcccaactaccagcctccagtgacatttgtt 582
Query: 442 gtggtccagnagcgtcatcacaccaggttgtttgctaataatcacaatgataatcgtgct 501
||||||||| ||||||||||||| ||| ||||||| ||| ||||| ||| | ||||
Sbjct: 581 gtggtccagaagcgtcatcacacaaggctgtttgcaaatgatcaccgtgaccgtactgct 522
Query: 502 gtcgataaaagcgggaacatactgcctggcactgtggtggactcgaagatctgccatcca 561
|| || |||||||| ||| ||||||| ||||| |||||||| || || || || |||
Sbjct: 521 gttgaccggagcgggaatatattgcctggtactgtcgtggactcaaaaatttgtcaccca 462
Query: 562 actgagtttgatttctacctgtgcagccatgctggcattcagggaacaagccgccctgcc 621
|| |||||||| ||||| |||| || |||||||| |||||||| |||||||| || ||
Sbjct: 461 acagagtttgacttctatttgtgtagtcatgctgggattcagggtacaagccgtccagct 402
Query: 622 cattaccatgttctgtgggatgagaacaactttacggctgatgggttgcaaactctcacc 681
||||||||||| || ||||| |||||||| || || |||||||||||||| | || ||
Sbjct: 401 cattaccatgtactttgggacgagaacaagttcactgctgatgggttgcagtcccttaca 342
Query: 682 aacaacttgtgttacacgtatgctaggtgcacacgctcagtatcgattgttcctcctgca 741
||||| | || ||||| ||||| || ||||| || || || || ||||| || ||||||
Sbjct: 341 aacaatctttgctacacatatgcaagatgcacgcgttctgtttccattgtgccacctgca 282
Query: 742 tactatgctcacctggcagccttccgagctcggttctacatggagccaga 791
||||| || || || || || ||||||||||| ||||||||||| |||||
Sbjct: 281 tactacgcacatcttgctgcattccgagctcgtttctacatggaaccaga 232
Score = 44.1 bits (22), Expect = 0.011
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 868 aatgttgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctac 927
|||| |||||||||||| | |||||| | ||||| || || |||||||| |||||||||
Sbjct: 140 aatgctgctgtgaggccccttcctgccttgaaggagaatgtcaagcgggttatgttctac 81
Query: 928 tg 929
||
Sbjct: 80 tg 79
>gb|CV274847.1|CV274847 WS0174.B21.1_J06 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0174_J06 3', mRNA sequence
Length = 849
Score = 180 bits (91), Expect = 8e-044
Identities = 303/374 (81%)
Strand = Plus / Minus
Query: 418 taccagcctccagttacttttgtcgtggtccagnagcgtcatcacaccaggttgtttgct 477
||||||||||| || || ||||| ||||| ||| ||||||||||||| ||| |||||||
Sbjct: 821 taccagcctcctgtgacatttgttgtggttcagaagcgtcatcacacaaggctgtttgca 762
Query: 478 aataatcacaatgataatcgtgctgtcgataaaagcgggaacatactgcctggcactgtg 537
||| ||||| ||| | |||||| || | || ||||| ||| ||||||| |||||
Sbjct: 761 aatgatcaccgtgaccgtaatgctgttgacaggagtgggaatatattgcctggtactgtt 702
Query: 538 gtggactcgaagatctgccatccaactgagtttgatttctacctgtgcagccatgctggc 597
||||||||||||||||||||||| ||||| || || ||||| |||| || || |||||
Sbjct: 701 gtggactcgaagatctgccatcctactgaattcgacttctatttgtgtagtcacgctggg 642
Query: 598 attcagggaacaagccgccctgcccattaccatgttctgtgggatgagaacaactttacg 657
|||||||| |||||||| || || ||||||||||| || |||||||||||||| |||||
Sbjct: 641 attcagggcacaagccgtccagctcattaccatgtactttgggatgagaacaagtttact 582
Query: 658 gctgatgggttgcaaactctcaccaacaacttgtgttacacgtatgctaggtgcacacgc 717
||||||||| |||| | || || ||||| | || ||||| ||||| | ||||| ||
Sbjct: 581 gctgatgggctgcagtccctgacaaacaatctttgctacacatatgcacgatgcacgcga 522
Query: 718 tcagtatcgattgttcctcctgcatactatgctcacctggcagccttccgagctcggttc 777
|| || || ||||| || ||||||||||||||||| || || || || |||||||| |||
Sbjct: 521 tctgtttccattgtgccacctgcatactatgctcatcttgctgcatttcgagctcgtttc 462
Query: 778 tacatggagccaga 791
||||||||||||||
Sbjct: 461 tacatggagccaga 448
Score = 65.9 bits (33), Expect = 3e-009
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 868 aatgttgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctac 927
|||| |||||||||||| ||||||||| | ||||| || || |||||||| |||||||||
Sbjct: 356 aatgctgctgtgaggcctttacctgccttgaaggagaatgtcaagcgggttatgttctac 297
Query: 928 tgcta 932
|||||
Sbjct: 296 tgcta 292
>gb|AJ772710.1|AJ772710 AJ772710 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700011G03F1, mRNA sequence
Length = 295
Score = 172 bits (87), Expect = 2e-041
Identities = 206/246 (83%)
Strand = Plus / Minus
Query: 241 gggactgtctctggtggcatgatcagggagcttctcatatctttctggagggcaactgga 300
||||| || |||||||||||||||| ||| ||||||||||| ||| | |||||||||||
Sbjct: 291 gggacagtgtctggtggcatgatcaaggaacttctcatatccttccgtagggcaactggg 232
Query: 301 cagaaaccaaagaggatcatattctacagggatggcgtcagtgagggacaattctaccaa 360
||||| ||| || | || ||||||||||| ||||| |||||||| ||||| || || |||
Sbjct: 231 cagaagccacagcgaattatattctacagagatggtgtcagtgaaggacagttttatcaa 172
Query: 361 gttctgttgtatgaacttgatgccattagaaaggcctgtgcgtcattggagtctgactac 420
||| ||||||||||||||||||| ||| | ||||| ||||| || || ||| | |||||
Sbjct: 171 gttttgttgtatgaacttgatgctattcgcaaggcatgtgcttctttagagcccaactac 112
Query: 421 cagcctccagttacttttgtcgtggtccagnagcgtcatcacaccaggttgtttgctaat 480
|||||||| || || ||||| ||||| ||| ||||||||||||| ||| ||||||| |||
Sbjct: 111 cagcctcctgtgacatttgttgtggttcagaagcgtcatcacacaaggctgtttgcaaat 52
Query: 481 aatcac 486
|||||
Sbjct: 51 gatcac 46
>gb|DT516220.1|DT516220 WS02430.B21_L23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02430_L23 3', mRNA sequence
Length = 910
Score = 172 bits (87), Expect = 2e-041
Identities = 347/434 (79%)
Strand = Plus / Minus
Query: 358 caagttctgttgtatgaacttgatgccattagaaaggcctgtgcgtcattggagtctgac 417
|||||| ||||||| || |||||||| ||| | ||||| ||||| || || ||| | |
Sbjct: 905 caagttttgttgtacgagcttgatgctattcgtaaggcatgtgcttctttagagcccaat 846
Query: 418 taccagcctccagttacttttgtcgtggtccagnagcgtcatcacaccaggttgtttgct 477
||||||||||| || || ||||| ||||| ||| ||||||||||||| ||| |||||||
Sbjct: 845 taccagcctcctgtgacatttgttgtggttcagaagcgtcatcacacaaggctgtttgca 786
Query: 478 aataatcacaatgataatcgtgctgtcgataaaagcgggaacatactgcctggcactgtg 537
||| ||||| ||| |||||| || | || ||||| ||| ||||||| |||||
Sbjct: 785 aatgatcaccgtgaccgcaatgctgttgacaggagtgggaatatattgcctggtactgtt 726
Query: 538 gtggactcgaagatctgccatccaactgagtttgatttctacctgtgcagccatgctggc 597
||||||||||||||||||||||| ||||| || || ||||| |||| || || |||||
Sbjct: 725 gtggactcgaagatctgccatcctactgaattcgacttctatttgtgtagtcacgctggg 666
Query: 598 attcagggaacaagccgccctgcccattaccatgttctgtgggatgagaacaactttacg 657
|||||||| |||||||| || || ||||||||||| || |||||||||||||| |||||
Sbjct: 665 attcagggcacaagccgtccagctcattaccatgtactttgggatgagaacaagtttact 606
Query: 658 gctgatgggttgcaaactctcaccaacaacttgtgttacacgtatgctaggtgcacacgc 717
||||||||| |||| | || || ||||| | || ||||| ||||| | ||||| |
Sbjct: 605 gctgatgggctgcagtccctgacaaacaatctttgctacacatatgcacgatgcacgaga 546
Query: 718 tcagtatcgattgttcctcctgcatactatgctcacctggcagccttccgagctcggttc 777
|| || || ||||| || ||||||||||||||||| || || || || |||||||| |||
Sbjct: 545 tctgtttccattgtgccacctgcatactatgctcatcttgctgcatttcgagctcgtttc 486
Query: 778 tacatggagccaga 791
||||||||||||||
Sbjct: 485 tacatggagccaga 472
Score = 65.9 bits (33), Expect = 3e-009
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 868 aatgttgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctac 927
|||| |||||||||||| ||||||||| | ||||| || || |||||||| |||||||||
Sbjct: 380 aatgctgctgtgaggcctttacctgccttgaaggagaatgtcaagcgggttatgttctac 321
Query: 928 tgcta 932
|||||
Sbjct: 320 tgcta 316
>gb|DV464515.1|DV464515 MTUNUL1.P28.E03 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 830
Score = 172 bits (87), Expect = 2e-041
Identities = 302/374 (80%)
Strand = Plus / Minus
Query: 418 taccagcctccagttacttttgtcgtggtccagnagcgtcatcacaccaggttgtttgct 477
||||||||||| || || ||||| ||||| ||| ||||||||||||| ||| |||||||
Sbjct: 816 taccagcctcctgtgacatttgttgtggttcagaagcgtcatcacactaggctgtttgca 757
Query: 478 aataatcacaatgataatcgtgctgtcgataaaagcgggaacatactgcctggcactgtg 537
||| ||||| ||| |||||| || | || ||||| ||| ||||||| |||||
Sbjct: 756 aatgatcaccgtgaccgcaatgctgttgacaggagtgggaatatattgcctggtactgtt 697
Query: 538 gtggactcgaagatctgccatccaactgagtttgatttctacctgtgcagccatgctggc 597
||||||||||||||||||||||| ||||| || || ||||| |||| || || |||||
Sbjct: 696 gtggactcgaagatctgccatcctactgaattcgacttctatttgtgtagtcacgctggg 637
Query: 598 attcagggaacaagccgccctgcccattaccatgttctgtgggatgagaacaactttacg 657
|||||||| |||||||| || || ||||||||||| || |||||||||||||| |||||
Sbjct: 636 attcagggcacaagccgtccagctcattaccatgtactttgggatgagaacaagtttact 577
Query: 658 gctgatgggttgcaaactctcaccaacaacttgtgttacacgtatgctaggtgcacacgc 717
||||||||| |||| | || || ||||| | || ||||| ||||| | ||||| ||
Sbjct: 576 gctgatgggctgcagtccctgacaaacaatctttgctacacatatgcacgatgcacgcga 517
Query: 718 tcagtatcgattgttcctcctgcatactatgctcacctggcagccttccgagctcggttc 777
|| || || ||||| || ||||||||||||||||| || || || || |||||||| |||
Sbjct: 516 tctgtttccattgtgccacctgcatactatgctcatcttgctgcatttcgagctcgtttc 457
Query: 778 tacatggagccaga 791
||||||||||||||
Sbjct: 456 tacatggagccaga 443
Score = 65.9 bits (33), Expect = 3e-009
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 868 aatgttgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctac 927
|||| |||||||||||| ||||||||| | ||||| || || |||||||| |||||||||
Sbjct: 351 aatgctgctgtgaggcctttacctgccttgaaggagaatgtcaagcgggttatgttctac 292
Query: 928 tgcta 932
|||||
Sbjct: 291 tgcta 287
>gb|BU896276.1|BU896276 X038C04 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 679
Score = 167 bits (84), Expect = 1e-039
Identities = 222/268 (82%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||||||||||||||||||||| ||||| || || ||||| |||
Sbjct: 21 tgcctggtactgttgtggactcgaagatctgccatcctactgaattcgacttctatttgt 80
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
| || ||||| || |||||||| |||||||| || || ||||||||||| || |||||||
Sbjct: 81 gtagtcatgccgggattcagggcacaagccgtccggctcattaccatgtactttgggatg 140
Query: 644 agaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttacacgtatg 703
||||||| ||||| |||||||||||||| | || || ||||| |||| ||||| ||||
Sbjct: 141 agaacaagtttactgctgatgggttgcagtccctgacaaacaatctgtgctacacatatg 200
Query: 704 ctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcacctggcagcct 763
| | ||||| || || || || ||||| || ||||||||||||||||| || || || |
Sbjct: 201 cacgatgcacgcgttctgtttccattgtgccacctgcatactatgctcatcttgctgcat 260
Query: 764 tccgagctcggttctacatggagccaga 791
| |||||||| ||||||||||| |||||
Sbjct: 261 ttcgagctcgtttctacatggaaccaga 288
Score = 58.0 bits (29), Expect = 8e-007
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 868 aatgttgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctac 927
|||| |||||||||||| ||||| ||| | ||||| || || |||||||| |||||||||
Sbjct: 381 aatgctgctgtgaggcccttacccgccttgaaggagaatgtcaagcgggttatgttctac 440
Query: 928 tgcta 932
|||||
Sbjct: 441 tgcta 445
>gb|BU896297.1|BU896297 X038E11 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 666
Score = 167 bits (84), Expect = 1e-039
Identities = 222/268 (82%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| ||||||||||||||||||||||| ||||| || || ||||| |||
Sbjct: 21 tgcctggtactgttgtggactcgaagatctgccatcctactgaattcgacttctatttgt 80
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
| || ||||| || |||||||| |||||||| || || ||||||||||| || |||||||
Sbjct: 81 gtagtcatgccgggattcagggcacaagccgtccggctcattaccatgtactttgggatg 140
Query: 644 agaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttacacgtatg 703
||||||| ||||| |||||||||||||| | || || ||||| |||| ||||| ||||
Sbjct: 141 agaacaagtttactgctgatgggttgcagtccctgacaaacaatctgtgctacacatatg 200
Query: 704 ctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcacctggcagcct 763
| | ||||| || || || || ||||| || ||||||||||||||||| || || || |
Sbjct: 201 cacgatgcacgcgttctgtttccattgtgccacctgcatactatgctcatcttgctgcat 260
Query: 764 tccgagctcggttctacatggagccaga 791
| |||||||| ||||||||||| |||||
Sbjct: 261 ttcgagctcgtttctacatggaaccaga 288
Score = 58.0 bits (29), Expect = 8e-007
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 868 aatgttgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctac 927
|||| |||||||||||| ||||| ||| | ||||| || || |||||||| |||||||||
Sbjct: 380 aatgctgctgtgaggcccttacccgccttgaaggagaatgtcaagcgggttatgttctac 439
Query: 928 tgcta 932
|||||
Sbjct: 440 tgcta 444
>gb|BU894478.1|BU894478 X010A02 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 650
Score = 163 bits (82), Expect = 2e-038
Identities = 229/278 (82%)
Strand = Plus / Plus
Query: 514 gggaacatactgcctggcactgtggtggactcgaagatctgccatccaactgagtttgat 573
||||| ||| ||||||| ||||| ||||||||||||||||||||||| ||||| || ||
Sbjct: 24 gggaatatattgcctggtactgttgtggactcgaagatctgccatcctactgaattcgac 83
Query: 574 ttctacctgtgcagccatgctggcattcagggaacaagccgccctgcccattaccatgtt 633
||||| |||| || ||||| || |||||||| |||||||| || || || ||||||||
Sbjct: 84 ttctatttgtgtagtcatgccgggattcagggcacaagccgtccagctcactaccatgta 143
Query: 634 ctgtgggatgagaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgt 693
|| |||||||||||||| ||||| |||||||||||||| | || || ||||| ||||
Sbjct: 144 ctttgggatgagaacaagtttactgctgatgggttgcagtccctgacaaacaatctgtgc 203
Query: 694 tacacgtatgctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcac 753
||||| ||||| | ||||| || || || || ||||| || |||||||||||||||||
Sbjct: 204 tacacatatgcacgatgcacgcgttctgtttccattgtgccacctgcatactatgctcat 263
Query: 754 ctggcagccttccgagctcggttctacatggagccaga 791
|| || || || |||||||| ||||||||||| |||||
Sbjct: 264 cttgctgcatttcgagctcgtttctacatggaaccaga 301
Score = 58.0 bits (29), Expect = 8e-007
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 868 aatgttgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctac 927
|||| |||||||||||| ||||| ||| | ||||| || || |||||||| |||||||||
Sbjct: 393 aatgctgctgtgaggcccttacccgccttgaaggagaatgtcaagcgggttatgttctac 452
Query: 928 tgcta 932
|||||
Sbjct: 453 tgcta 457
>gb|CX171314.1|CX171314 G11_69-94_13.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 555
Score = 163 bits (82), Expect = 2e-038
Identities = 229/278 (82%)
Strand = Plus / Plus
Query: 514 gggaacatactgcctggcactgtggtggactcgaagatctgccatccaactgagtttgat 573
||||| ||| ||||||| ||||| ||||||||||||||||||||||| ||||| || ||
Sbjct: 48 gggaatatattgcctggtactgttgtggactcgaagatctgccatcctactgaattcgac 107
Query: 574 ttctacctgtgcagccatgctggcattcagggaacaagccgccctgcccattaccatgtt 633
||||| |||| || || ||||| |||||||| |||||||| || || |||||||||||
Sbjct: 108 ttctatttgtgtagtcacgctgggattcagggcacaagccgtccagctcattaccatgta 167
Query: 634 ctgtgggatgagaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgt 693
|| |||||||||||||| ||||| ||||||||| |||| | || || ||||| | ||
Sbjct: 168 ctttgggatgagaacaagtttactgctgatgggctgcagtccctgacgaacaatctttgc 227
Query: 694 tacacgtatgctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcac 753
||||| ||||| | ||||| || || || || ||||| || |||||||||||||||||
Sbjct: 228 tacacatatgcacgatgcacgcgatctgtttccattgtgccacctgcatactatgctcat 287
Query: 754 ctggcagccttccgagctcggttctacatggagccaga 791
|| || || || |||||||| |||||||||||||||||
Sbjct: 288 cttgctgcatttcgagctcgtttctacatggagccaga 325
Score = 65.9 bits (33), Expect = 3e-009
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 868 aatgttgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctac 927
|||| |||||||||||| ||||||||| | ||||| || || |||||||| |||||||||
Sbjct: 417 aatgctgctgtgaggcctttacctgccttgaaggagaatgtcaagcgggttatgttctac 476
Query: 928 tgcta 932
|||||
Sbjct: 477 tgcta 481
>gb|BU880106.1|BU880106 UM41TE06 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 610
Score = 155 bits (78), Expect = 4e-036
Identities = 197/237 (83%)
Strand = Plus / Plus
Query: 250 tctggtggcatgatcagggagcttctcatatctttctggagggcaactggacagaaacca 309
|||||||||||||||| ||| ||||||||||||||| |||| || || || ||||| ||
Sbjct: 89 tctggtggcatgatcaaggaacttctcatatctttccggagagccacagggcagaagcct 148
Query: 310 aagaggatcatattctacagggatggcgtcagtgagggacaattctaccaagttctgttg 369
|||| || ||||||||||| ||||| |||||||| || || ||||| |||||| |||||
Sbjct: 149 cagagaattatattctacagagatggtgtcagtgaagggcagttctatcaagttttgttg 208
Query: 370 tatgaacttgatgccattagaaaggcctgtgcgtcattggagtctgactaccagcctcca 429
| ||||||||||| ||| | ||||| ||||| || || ||| | ||||||||||||||
Sbjct: 209 cacgaacttgatgctattcgtaaggcatgtgcttctttagagcccaactaccagcctcca 268
Query: 430 gttacttttgtcgtggtccagnagcgtcatcacaccaggttgtttgctaataatcac 486
|| || ||||| ||||| ||| ||||||||||||| ||| ||||||| ||| |||||
Sbjct: 269 gtgacatttgttgtggttcagaagcgtcatcacacaaggctgtttgcaaatgatcac 325
Score = 123 bits (62), Expect = 2e-026
Identities = 185/226 (81%)
Strand = Plus / Plus
Query: 524 tgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgt 583
||||||| ||||| |||||||| || || || || ||||| ||||| || ||||| |||
Sbjct: 361 tgcctggtactgttgtggactcaaaaatttgtcacccaacagagttcgacttctatttgt 420
Query: 584 gcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatg 643
| || |||||||| |||||||| |||||||| || || ||||||||||| || |||||||
Sbjct: 421 gtagtcatgctgggattcagggtacaagccgtccagctcattaccatgtactttgggatg 480
Query: 644 agaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttacacgtatg 703
||||||| || || |||||||||||||| |||| || ||||| | || ||||| ||||
Sbjct: 481 agaacaagttcactgctgatgggttgcagtctcttacaaacaatctttgctacacatatg 540
Query: 704 ctaggtgcacacgctcagtatcgattgttcctcctgcatactatgc 749
| || ||||| || || ||||| ||||| || ||||||||||||||
Sbjct: 541 caagatgcacgcgttctgtatccattgtgccacctgcatactatgc 586
>gb|BU898140.1|BU898140 X075D09 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 623
Score = 155 bits (78), Expect = 4e-036
Identities = 228/278 (82%)
Strand = Plus / Plus
Query: 514 gggaacatactgcctggcactgtggtggactcgaagatctgccatccaactgagtttgat 573
||||| ||| ||||||| ||||| ||||||||||||||||||||||| ||||| || ||
Sbjct: 85 gggaatatattgcctggtactgttgtggactcgaagatctgccatcctactgaattcgac 144
Query: 574 ttctacctgtgcagccatgctggcattcagggaacaagccgccctgcccattaccatgtt 633
||||| |||| || ||||| || |||||||| |||||||| || || || ||||||||
Sbjct: 145 ttctatttgtgtagtcatgccgggattcagggcacaagccgtccagctcactaccatgta 204
Query: 634 ctgtgggatgagaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgt 693
|| |||||||||||||| ||||| |||||||||||||| | || || ||||| ||||
Sbjct: 205 ctttgggatgagaacaagtttactgctgatgggttgcagtccctgacaaacaatctgtgc 264
Query: 694 tacacgtatgctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcac 753
||||| ||||| | ||||| || || || || ||||| || |||||||||||||||||
Sbjct: 265 tacacatatgcgcgatgcacgcgttctgtttccattgtgccacctgcatactatgctcat 324
Query: 754 ctggcagccttccgagctcggttctacatggagccaga 791
|| | || || |||||||| ||||||||||| |||||
Sbjct: 325 cttgttgcatttcgagctcgtttctacatggaaccaga 362
Score = 58.0 bits (29), Expect = 8e-007
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 868 aatgttgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctac 927
|||| |||||||||||| ||||| ||| | ||||| || || |||||||| |||||||||
Sbjct: 455 aatgctgctgtgaggcccttacccgccttgaaggagaatgtcaagcgggttatgttctac 514
Query: 928 tgcta 932
|||||
Sbjct: 515 tgcta 519
>gb|CK099351.1|CK099351 A063P66.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A063P66 5', mRNA sequence
Length = 546
Score = 155 bits (78), Expect = 4e-036
Identities = 229/278 (82%), Gaps = 1/278 (0%)
Strand = Plus / Plus
Query: 514 gggaacatactgcctggcactgtggtggactcgaagatctgccatccaactgagtttgat 573
||||| ||| ||||||| ||||| |||||||||||||||||||||| | |||| || ||
Sbjct: 2 gggaatatattgcctggtactgttgtggactcgaagatctgccatcta-ctgaattcgac 60
Query: 574 ttctacctgtgcagccatgctggcattcagggaacaagccgccctgcccattaccatgtt 633
||||| |||| || ||||| || |||||||| |||||||| || || |||||||||||
Sbjct: 61 ttctatttgtgtagtcatgccgggattcagggcacaagccgtccggctcattaccatgta 120
Query: 634 ctgtgggatgagaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgt 693
|| |||||||||||||| ||||| |||||||||||||| | || || ||||| ||||
Sbjct: 121 ctttgggatgagaacaagtttactgctgatgggttgcagtccctgacaaacaatctgtgc 180
Query: 694 tacacgtatgctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcac 753
||||| ||||| | ||||| || || || || ||||| || |||||||||||||||||
Sbjct: 181 tacacatatgcacgatgcacgcgttctgtttccattgtgccacctgcatactatgctcat 240
Query: 754 ctggcagccttccgagctcggttctacatggagccaga 791
|| || || || |||||||| ||||||||||| |||||
Sbjct: 241 cttgctgcatttcgagctcgtttctacatggaaccaga 278
Score = 58.0 bits (29), Expect = 8e-007
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 868 aatgttgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctac 927
|||| |||||||||||| ||||| ||| | ||||| || || |||||||| |||||||||
Sbjct: 370 aatgctgctgtgaggcccttacccgccttgaaggagaatgtcaagcgggttatgttctac 429
Query: 928 tgcta 932
|||||
Sbjct: 430 tgcta 434
>gb|BU835074.1|BU835074 T069C02 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 727
Score = 149 bits (75), Expect = 3e-034
Identities = 203/246 (82%)
Strand = Plus / Plus
Query: 241 gggactgtctctggtggcatgatcagggagcttctcatatctttctggagggcaactgga 300
||||| || |||||||||||||||| ||| ||||||||||| ||| | |||||||| |||
Sbjct: 448 gggacagtgtctggtggcatgatcaaggaacttctcatatccttccgtagggcaaccgga 507
Query: 301 cagaaaccaaagaggatcatattctacagggatggcgtcagtgagggacaattctaccaa 360
||||| ||| || | || ||||||||||| ||||| |||||||| ||||| || || |||
Sbjct: 508 cagaagccacagcgaataatattctacagagatggtgtcagtgaaggacagttttatcaa 567
Query: 361 gttctgttgtatgaacttgatgccattagaaaggcctgtgcgtcattggagtctgactac 420
||| ||||||| ||||| ||||| ||| | ||||| ||||| || || ||| | | |||
Sbjct: 568 gttttgttgtacgaactcgatgctattcgtaaggcatgtgcttctttagagcccaattac 627
Query: 421 cagcctccagttacttttgtcgtggtccagnagcgtcatcacaccaggttgtttgctaat 480
|||||||| || || ||||| ||||| ||| ||||||||||||| ||| ||||||| |||
Sbjct: 628 cagcctcctgtgacatttgttgtggttcagaagcgtcatcacacaaggctgtttgcaaat 687
Query: 481 aatcac 486
|||||
Sbjct: 688 gatcac 693
Score = 65.9 bits (33), Expect = 3e-009
Identities = 111/137 (81%)
Strand = Plus / Plus
Query: 55 actattatctttggtgctgatgtgacccatccccatcctggggaagattctagtccttcc 114
|||||||| |||||||||||||| || ||||| ||||| ||||| || || || || ||
Sbjct: 262 actattatttttggtgctgatgttactcatcctcatccgggggaggactcaagcccatct 321
Query: 115 attgcagctgtggttgcttttcaagactggcctgaggttacaaagtatgcaggattggtg 174
|||||||| || || |||| ||||| ||||| |||||||| || ||||| || ||||
Sbjct: 322 attgcagccgttgtggcttcgcaagattggccagaggttaccaaatatgctggcctggtt 381
Query: 175 agtgctcaagcccatcg 191
|||||||||| |||||
Sbjct: 382 tgtgctcaagctcatcg 398
>gb|AI166241.1|AI166241 a063p66u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 382
Score = 135 bits (68), Expect = 4e-030
Identities = 208/254 (81%), Gaps = 1/254 (0%)
Strand = Plus / Plus
Query: 538 gtggactcgaagatctgccatccaactgagtttgatttctacctgtgcagccatgctggc 597
||||||||||||||||||||||| ||||| || || ||||| |||| || ||||| ||
Sbjct: 1 gtggactcgaagatctgccatcctactgaattcgacttctatttgtgtagtcatgccggg 60
Query: 598 attcagggaacaagccgccctgcccattaccatgttctgtgggatgagaacaactttacg 657
|||||||| |||||||| || | ||||||||||| || |||||||||||||| |||||
Sbjct: 61 attcagggcacaagccgtcc-gntcattaccatgtactttgggatgagaacaagtttact 119
Query: 658 gctgatgggttgcaaactctcaccaacaacttgtgttacacgtatgctaggtgcacacgc 717
|||||||||||||| | || || ||||| |||| ||||| |||| | ||||| ||
Sbjct: 120 gctgatgggttgcagtccctgacaaacaatctgtgctacacanatgcacgatgcacgcgt 179
Query: 718 tcagtatcgattgttcctcctgcatactatgctcacctggcagccttccgagctcggttc 777
|| || || ||||| || ||||||||||||||||| || || || || |||||||| |||
Sbjct: 180 tctgtttccattgtgccacctgcatactatgctcatcttgctgcatttcgagctcgtttc 239
Query: 778 tacatggagccaga 791
|||||||| |||||
Sbjct: 240 tacatggaaccaga 253
>gb|CV227387.1|CV227387 WS0167.B21_A17 PT-DX-A-7 Populus trichocarpa cDNA clone WS0167_A17
3', mRNA sequence
Length = 709
Score = 133 bits (67), Expect = 2e-029
Identities = 202/247 (81%)
Strand = Plus / Plus
Query: 545 cgaagatctgccatccaactgagtttgatttctacctgtgcagccatgctggcattcagg 604
|||||||||||||||| ||||| || || ||||| |||| || || ||||| |||||||
Sbjct: 1 cgaagatctgccatcctactgaattcgacttctatttgtgtagtcacgctgggattcagg 60
Query: 605 gaacaagccgccctgcccattaccatgttctgtgggatgagaacaactttacggctgatg 664
| |||||||| || || ||||||||||| || |||||||||||||| ||||| |||||||
Sbjct: 61 gcacaagccgtccagctcattaccatgtactttgggatgagaacaagtttactgctgatg 120
Query: 665 ggttgcaaactctcaccaacaacttgtgttacacgtatgctaggtgcacacgctcagtat 724
|| |||| | || || ||||| | || ||||| ||||| | ||||| || || || |
Sbjct: 121 ggctgcagtccctgacgaacaatctttgctacacatatgcacgatgcacgcgatctgttt 180
Query: 725 cgattgttcctcctgcatactatgctcacctggcagccttccgagctcggttctacatgg 784
| ||||| || ||||||||||||||||| || || || || |||||||| ||||||||||
Sbjct: 181 ccattgtgccacctgcatactatgctcatcttgctgcatttcgagctcgtttctacatgg 240
Query: 785 agccaga 791
|||||||
Sbjct: 241 agccaga 247
Score = 65.9 bits (33), Expect = 3e-009
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 868 aatgttgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctac 927
|||| |||||||||||| ||||||||| | ||||| || || |||||||| |||||||||
Sbjct: 339 aatgctgctgtgaggcctttacctgccttgaaggagaatgtcaagcgggttatgttctac 398
Query: 928 tgcta 932
|||||
Sbjct: 399 tgcta 403
>gb|AJ772440.1|AJ772440 AJ772440 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700006E12F1, mRNA sequence
Length = 418
Score = 131 bits (66), Expect = 6e-029
Identities = 222/274 (81%)
Strand = Plus / Plus
Query: 517 aacatactgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttc 576
||||||||||||||||| ||||| || || || ||||| |||||||| |||||||| |||
Sbjct: 71 aacatactgcctggcaccgtggttgattctaaaatctgtcatccaacagagtttgacttc 130
Query: 577 tacctgtgcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctg 636
|| || || ||||||||||| |||||||| ||||| | || || || || |||||| ||
Sbjct: 131 tatctctgtagccatgctggtattcaggggacaagtaggccagctcactatcatgttttg 190
Query: 637 tgggatgagaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttac 696
||||||||||||||||| || |||||||| | || || | || ||||| | || |||
Sbjct: 191 tgggatgagaacaacttcacagctgatggaatccagtctttgacaaacaatctctgctac 250
Query: 697 acgtatgctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcacctg 756
||||||||||||||||| ||||| || || | |||||||| ||||||||||| || |
Sbjct: 251 acgtatgctaggtgcactcgctctgtttcagtagttcctccagcatactatgcgcattta 310
Query: 757 gcagccttccgagctcggttctacatggagccag 790
|| || || || |||||||| |||| ||||||||
Sbjct: 311 gctgcttttcgtgctcggttttacacggagccag 344
>gb|CK117051.1|CK117051 B024P66 Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B024P66 5', mRNA sequence
Length = 276
Score = 129 bits (65), Expect = 2e-028
Identities = 209/256 (81%), Gaps = 1/256 (0%)
Strand = Plus / Plus
Query: 416 actaccagcctccagttacttttgtcgtggtccagnagcgtcatcacaccaggttgtttg 475
||||||||||||||| || ||||| ||||||||| ||||||||||||| ||| ||||||
Sbjct: 5 actaccagcctccagg-acatttgttgtggtccagaagcgtcatcacacaaggctgtttg 63
Query: 476 ctaataatcacaatgataatcgtgctgtcgataaaagcgggaacatactgcctggcactg 535
| ||| ||||| ||| | |||||| || |||||||| ||| ||||||| ||||
Sbjct: 64 caaatgatcaccgtgaccgtactgctgttgaccggagcgggaatatattgcctggtactg 123
Query: 536 tggtggactcgaagatctgccatccaactgagtttgatttctacctgtgcagccatgctg 595
| |||||||| || || || || ||||| |||||||| ||||| |||| || |||||||
Sbjct: 124 tcgtggactcaaaaatttgtcacccaacagagtttgacttctatttgtgtagtcatgctg 183
Query: 596 gcattcagggaacaagccgccctgcccattaccatgttctgtgggatgagaacaacttta 655
| |||||||| |||||||| || || ||||||||||| || ||||| |||||||| || |
Sbjct: 184 ggattcagggtacaagccgtccagctcattaccatgtactttgggacgagaacaagttca 243
Query: 656 cggctgatgggttgca 671
| ||||||||||||||
Sbjct: 244 ctgctgatgggttgca 259
>gb|CV269160.1|CV269160 WS0207.B21_H21 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0207_H21 3', mRNA sequence
Length = 688
Score = 123 bits (62), Expect = 2e-026
Identities = 188/230 (81%)
Strand = Plus / Minus
Query: 562 actgagtttgatttctacctgtgcagccatgctggcattcagggaacaagccgccctgcc 621
||||| ||||| ||||| |||| || |||||||| |||||||| |||||||| || ||
Sbjct: 688 actgaatttgacttctatttgtgtagtcatgctgggattcagggcacaagccgtccagct 629
Query: 622 cattaccatgttctgtgggatgagaacaactttacggctgatgggttgcaaactctcacc 681
||||||||||| || |||||||||||||| ||||| ||||||||| |||| | || ||
Sbjct: 628 cattaccatgtactttgggatgagaacaagtttactgctgatgggctgcagtccctgaca 569
Query: 682 aacaacttgtgttacacgtatgctaggtgcacacgctcagtatcgattgttcctcctgca 741
||||| | || ||||| ||||| | ||||| || || || || ||||| || ||||||
Sbjct: 568 aacaatctttgctacacatatgcacgatgcacgcgatctgtttccattgtgccacctgca 509
Query: 742 tactatgctcacctggcagccttccgagctcggttctacatggagccaga 791
||||||||||| || || || || |||||||| |||||||||||||||||
Sbjct: 508 tactatgctcatcttgctgcatttcgagctcgtttctacatggagccaga 459
Score = 65.9 bits (33), Expect = 3e-009
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 868 aatgttgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctac 927
|||| |||||||||||| ||||||||| | ||||| || || |||||||| |||||||||
Sbjct: 367 aatgctgctgtgaggcctttacctgccttgaaggagaatgtcaagcgggttatgttctac 308
Query: 928 tgcta 932
|||||
Sbjct: 307 tgcta 303
>gb|BU887345.1|BU887345 R058B10 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 604
Score = 121 bits (61), Expect = 6e-026
Identities = 118/137 (86%)
Strand = Plus / Plus
Query: 55 actattatctttggtgctgatgtgacccatccccatcctggggaagattctagtccttcc 114
|||||||| ||||||||||| || || ||||| |||||||||||||| || || || |||
Sbjct: 354 actattatttttggtgctgacgttactcatcctcatcctggggaagactcaagcccatcc 413
Query: 115 attgcagctgtggttgcttttcaagactggcctgaggttacaaagtatgcaggattggtg 174
||||||||||| || |||| |||||||||||| |||||||| |||||||| || ||||
Sbjct: 414 attgcagctgttgtggcttctcaagactggccagaggttactaagtatgctggcctggtt 473
Query: 175 agtgctcaagcccatcg 191
||||||||||||||||
Sbjct: 474 tgtgctcaagcccatcg 490
Score = 60.0 bits (30), Expect = 2e-007
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 241 gggactgtctctggtggcatgatcagggagcttctcatatctttctggag 290
||||| || |||||||||||||||| ||| ||||||||||||||| ||||
Sbjct: 540 gggacagtgtctggtggcatgatcaaggaacttctcatatctttccggag 589
>gb|BU891188.1|BU891188 P047A12 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 494
Score = 113 bits (57), Expect = 1e-023
Identities = 189/233 (81%)
Strand = Plus / Plus
Query: 559 ccaactgagtttgatttctacctgtgcagccatgctggcattcagggaacaagccgccct 618
||||| |||||| | ||||| ||||| || |||||||| |||||||| |||||||| ||
Sbjct: 18 ccaacggagtttaacttctatctgtgtagtcatgctgggattcagggtacaagccgtcca 77
Query: 619 gcccattaccatgttctgtgggatgagaacaactttacggctgatgggttgcaaactctc 678
|| ||||||||||| || ||||| |||||||| || || |||||||||||||| | ||
Sbjct: 78 gctcattaccatgtactttgggacgagaacaagttcactgctgatgggttgcagtccctt 137
Query: 679 accaacaacttgtgttacacgtatgctaggtgcacacgctcagtatcgattgttcctcct 738
|| ||||| | || ||||| ||||| || ||||| || || || || ||||| || |||
Sbjct: 138 acaaacaatctttgctacacatatgcaagatgcacgcgttctgtttccattgtgccacct 197
Query: 739 gcatactatgctcacctggcagccttccgagctcggttctacatggagccaga 791
|||||||| || || || || || ||||||||||| ||||||||||| |||||
Sbjct: 198 gcatactacgcacatcttgctgcattccgagctcgtttctacatggaaccaga 250
Score = 44.1 bits (22), Expect = 0.011
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 868 aatgttgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctac 927
|||| |||||||||||| | |||||| | ||||| || || |||||||| |||||||||
Sbjct: 342 aatgctgctgtgaggccccttcctgccttgaaggagaatgtcaagcgggttatgttctac 401
Query: 928 tg 929
||
Sbjct: 402 tg 403
>gb|CV241850.1|CV241850 WS02513.B21_G18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02513_G18 3', mRNA sequence
Length = 677
Score = 111 bits (56), Expect = 6e-023
Identities = 164/200 (82%)
Strand = Plus / Minus
Query: 592 gctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatgagaacaac 651
||||| |||||||| |||||||| || || ||||||||||| || ||||||||||||||
Sbjct: 647 gctgggattcagggcacaagccgtccagctcattaccatgtactttgggatgagaacaag 588
Query: 652 tttacggctgatgggttgcaaactctcaccaacaacttgtgttacacgtatgctaggtgc 711
||||| ||||||||| |||| | || || ||||| | || ||||| ||||| | |||
Sbjct: 587 tttactgctgatgggctgcagtccctgacaaacaatctttgctacacatatgcacgatgc 528
Query: 712 acacgctcagtatcgattgttcctcctgcatactatgctcacctggcagccttccgagct 771
|| || || || || ||||| || ||||||||||||||||| || || || || ||||||
Sbjct: 527 acgcgatctgtttccattgtgccacctgcatactatgctcatcttgctgcatttcgagct 468
Query: 772 cggttctacatggagccaga 791
|| |||||||||||||||||
Sbjct: 467 cgtttctacatggagccaga 448
Score = 65.9 bits (33), Expect = 3e-009
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 868 aatgttgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctac 927
|||| |||||||||||| ||||||||| | ||||| || || |||||||| |||||||||
Sbjct: 356 aatgctgctgtgaggcctttacctgccttgaaggagaatgtcaagcgggttatgttctac 297
Query: 928 tgcta 932
|||||
Sbjct: 296 tgcta 292
>gb|CK110333.1|CK110333 N055G06 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA clone N055G06 5', mRNA sequence
Length = 826
Score = 109 bits (55), Expect = 2e-022
Identities = 121/143 (84%)
Strand = Plus / Plus
Query: 241 gggactgtctctggtggcatgatcagggagcttctcatatctttctggagggcaactgga 300
||||| || |||||||||||||||| ||| ||||||||||| ||| | |||||||| |||
Sbjct: 683 gggacagtgtctggtggcatgatcaaggaacttctcatatccttccgtagggcaaccgga 742
Query: 301 cagaaaccaaagaggatcatattctacagggatggcgtcagtgagggacaattctaccaa 360
||||| ||| || | || ||||||||||| ||||| |||||||| ||||| || || |||
Sbjct: 743 cagaagccacagcgaataatattctacagagatggtgtcagtgaaggacagttttatcaa 802
Query: 361 gttctgttgtatgaacttgatgc 383
||| ||||||| ||||| |||||
Sbjct: 803 gttttgttgtacgaactcgatgc 825
Score = 65.9 bits (33), Expect = 3e-009
Identities = 111/137 (81%)
Strand = Plus / Plus
Query: 55 actattatctttggtgctgatgtgacccatccccatcctggggaagattctagtccttcc 114
|||||||| |||||||||||||| || ||||| ||||| ||||| || || || || ||
Sbjct: 497 actattatttttggtgctgatgttactcatcctcatccgggggaggactcaagcccatct 556
Query: 115 attgcagctgtggttgcttttcaagactggcctgaggttacaaagtatgcaggattggtg 174
|||||||| || || |||| ||||| ||||| |||||||| || ||||| || ||||
Sbjct: 557 attgcagccgttgtggcttcgcaagattggccagaggttaccaaatatgctggcctggtt 616
Query: 175 agtgctcaagcccatcg 191
|||||||||| |||||
Sbjct: 617 tgtgctcaagctcatcg 633
>gb|CN519268.1|CN519268 GQ0103.B3_C13 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0103_C13 5', mRNA sequence
Length = 318
Score = 109 bits (55), Expect = 2e-022
Identities = 121/143 (84%)
Strand = Plus / Plus
Query: 241 gggactgtctctggtggcatgatcagggagcttctcatatctttctggagggcaactgga 300
||||| || |||||||||||||||| ||||||||||||||| ||| | |||||||| ||
Sbjct: 118 gggacagtgtctggtggcatgatcaaggagcttctcatatccttccgtagggcaaccggg 177
Query: 301 cagaaaccaaagaggatcatattctacagggatggcgtcagtgagggacaattctaccaa 360
||||| ||| || | || ||||||||||| ||||| |||||||| ||||| || || |||
Sbjct: 178 cagaagccacagcgaattatattctacagagatggtgtcagtgaaggacagttttatcaa 237
Query: 361 gttctgttgtatgaacttgatgc 383
||| ||||||| || ||||||||
Sbjct: 238 gttttgttgtacgagcttgatgc 260
>gb|BU811238.1|BU811238 UL81TG02 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 544
Score = 103 bits (52), Expect = 1e-020
Identities = 199/247 (80%), Gaps = 1/247 (0%)
Strand = Plus / Plus
Query: 241 gggactgtctctggtggcatgatcagggagcttctcatatctttctggagggcaactgga 300
||||| || |||||||||||||||| ||| ||||||||||| ||| | |||||||| |||
Sbjct: 264 gggacagtgtctggtggcatgatcaaggaacttctcatatccttccgtagggcaaccgga 323
Query: 301 cagaaaccaaagaggatcatattctacagggatggcgtcagtgagggacaattctaccaa 360
||||| ||| || | || ||||||||||| |||| |||||||| ||||| || || |||
Sbjct: 324 cagaacccacagcgaataatattctacagatatggtgtcagtgaaggacagttttatcaa 383
Query: 361 gttctgttgtatgaacttgatgccattagaaaggcctgtgcgtcattggagtctgactac 420
||| || ||| ||||| ||||| ||| | ||||| ||||| | || ||| | | |||
Sbjct: 384 gtttggtggtacgaactcgatgctattcgtaaggcatgtgctcctttagagcccaattac 443
Query: 421 cagcctccagtt-acttttgtcgtggtccagnagcgtcatcacaccaggttgtttgctaa 479
|||||||| ||| || ||||| ||||| ||| ||||| ||||||| ||| ||||||| ||
Sbjct: 444 cagcctcctgttcacatttgttgtggttcagaagcgttatcacacaaggctgtttgcaaa 503
Query: 480 taatcac 486
| |||||
Sbjct: 504 tgatcac 510
Score = 48.1 bits (24), Expect = 7e-004
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 55 actattatctttggtgctgatgtgacccatccccatcctgggga 98
|||||||| |||||||||||||| || ||||| ||||| |||||
Sbjct: 76 actattatttttggtgctgatgttactcatcctcatccggggga 119
>gb|BU895787.1|BU895787 X031A06 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 568
Score = 97.6 bits (49), Expect = 9e-019
Identities = 151/185 (81%)
Strand = Plus / Plus
Query: 607 acaagccgccctgcccattaccatgttctgtgggatgagaacaactttacggctgatggg 666
|||||||| || || ||||||||||| || |||||||| ||||| ||||| |||||||||
Sbjct: 6 acaagccgtccggctcattaccatgtactttgggatgataacaagtttactgctgatggg 65
Query: 667 ttgcaaactctcaccaacaacttgtgttacacgtatgctaggtgcacacgctcagtatcg 726
||||| | || || ||||| |||| ||||| ||||| | ||||| || || || ||
Sbjct: 66 ttgcagtccctgacaaacaatctgtgctacacatatgcacgatgcacgcgttctgtttcc 125
Query: 727 attgttcctcctgcatactatgctcacctggcagccttccgagctcggttctacatggag 786
||||| || ||||||||||||||||| || || || || |||||||| |||||||||||
Sbjct: 126 attgtgccacctgcatactatgctcatcttgctgcatttcgagctcgtttctacatggaa 185
Query: 787 ccaga 791
|||||
Sbjct: 186 ccaga 190
Score = 58.0 bits (29), Expect = 8e-007
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 868 aatgttgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctac 927
|||| |||||||||||| ||||| ||| | ||||| || || |||||||| |||||||||
Sbjct: 282 aatgctgctgtgaggcccttacccgccttgaaggagaatgtcaagcgggttatgttctac 341
Query: 928 tgcta 932
|||||
Sbjct: 342 tgcta 346
>gb|CV276089.1|CV276089 WS0178.B21.1_J13 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0178_J13 3', mRNA sequence
Length = 618
Score = 97.6 bits (49), Expect = 9e-019
Identities = 151/185 (81%)
Strand = Plus / Minus
Query: 607 acaagccgccctgcccattaccatgttctgtgggatgagaacaactttacggctgatggg 666
|||||||| || || ||||||||||| || |||||||||||||| ||||| |||||||||
Sbjct: 617 acaagccgtccagctcattaccatgtactttgggatgagaacaagtttactgctgatggg 558
Query: 667 ttgcaaactctcaccaacaacttgtgttacacgtatgctaggtgcacacgctcagtatcg 726
|||| | || || ||||| | || ||||| ||||| | ||||| || || || ||
Sbjct: 557 ctgcagtccctgacgaacaatctttgctacacatatgcacgatgcacgcgatctgtttcc 498
Query: 727 attgttcctcctgcatactatgctcacctggcagccttccgagctcggttctacatggag 786
||||| || ||||||||||||||||| || || || || |||||||| ||||||||||||
Sbjct: 497 attgtgccacctgcatactatgctcatcttgctgcatttcgagctcgtttctacatggag 438
Query: 787 ccaga 791
|||||
Sbjct: 437 ccaga 433
Score = 65.9 bits (33), Expect = 3e-009
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 868 aatgttgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctac 927
|||| |||||||||||| ||||||||| | ||||| || || |||||||| |||||||||
Sbjct: 341 aatgctgctgtgaggcctttacctgccttgaaggagaatgtcaagcgggttatgttctac 282
Query: 928 tgcta 932
|||||
Sbjct: 281 tgcta 277
>gb|CK100043.1|CK100043 B006P29.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B006P29 5', mRNA sequence
Length = 475
Score = 89.7 bits (45), Expect = 2e-016
Identities = 123/149 (82%)
Strand = Plus / Plus
Query: 517 aacatactgcctggcactgtggtggactcgaagatctgccatccaactgagtttgatttc 576
|||||| | |||||||||||||| || || || ||||| |||||||| || ||||| ||
Sbjct: 211 aacatattacctggcactgtggttgattctaaaatctgtcatccaacggaatttgacttt 270
Query: 577 tacctgtgcagccatgctggcattcagggaacaagccgccctgcccattaccatgttctg 636
|| || || ||||||||||| |||||||||||||| | || || || || |||||| ||
Sbjct: 271 tatctctgtagccatgctggtattcagggaacaagtagaccagcacactatcatgttttg 330
Query: 637 tgggatgagaacaactttacggctgatgg 665
|||||||||||||| || || ||||||||
Sbjct: 331 tgggatgagaacaatttcacagctgatgg 359
>gb|DN488212.1|DN488212 R041G07.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R041G07 3', mRNA sequence
Length = 811
Score = 89.7 bits (45), Expect = 2e-016
Identities = 159/197 (80%)
Strand = Plus / Minus
Query: 565 gagtttgatttctacctgtgcagccatgctggcattcagggaacaagccgccctgcccat 624
|||||||| |||||||| ||| |||||||| ||||||||||| ||| | ||| | |||
Sbjct: 596 gagtttgacttctaccttaacagtcatgctggaattcagggaaccagcagacctacacat 537
Query: 625 taccatgttctgtgggatgagaacaactttacggctgatgggttgcaaactctcaccaac 684
||||| || ||| ||||| |||||||| | ||||||| || ||||| |||||||||
Sbjct: 536 taccacgtgttgtttgatgaaaacaacttcagttctgatggtttacaaaccctcaccaac 477
Query: 685 aacttgtgttacacgtatgctaggtgcacacgctcagtatcgattgttcctcctgcatac 744
|| ||||| ||||||||||| || ||||| || || || || || || ||||| |||||
Sbjct: 476 aatttgtgctacacgtatgcaagatgcactcggtctgtttccatagtgcctcccgcatat 417
Query: 745 tatgctcacctggcagc 761
|||||||| ||||||||
Sbjct: 416 tatgctcatctggcagc 400
>gb|DN500128.1|DN500128 UB48DPE03.5pR Populus active cambium cDNA library Populus tremula
cDNA clone UB48DPE03 5', mRNA sequence
Length = 522
Score = 85.7 bits (43), Expect = 3e-015
Identities = 127/155 (81%)
Strand = Plus / Plus
Query: 637 tgggatgagaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttac 696
|||||||||||||| ||||| |||||||||||||| | || || ||||| |||| |||
Sbjct: 27 tgggatgagaacaagtttactgctgatgggttgcagtccctgacaaacaatctgtgctac 86
Query: 697 acgtatgctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcacctg 756
|| ||||| | ||||| || || || || ||||| || ||||||||||||||||| ||
Sbjct: 87 acatatgcacgatgcacgcgttctgtttccattgtgccacctgcatactatgctcatctt 146
Query: 757 gcagccttccgagctcggttctacatggagccaga 791
|| || || |||||||| ||||||||||| |||||
Sbjct: 147 gctgcatttcgagctcgtttctacatggaaccaga 181
>gb|CN524305.1|CN524305 GQ015M13.T3_E09 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M13_E09 5', mRNA sequence
Length = 849
Score = 81.8 bits (41), Expect = 5e-014
Identities = 122/149 (81%)
Strand = Plus / Plus
Query: 565 gagtttgatttctacctgtgcagccatgctggcattcagggaacaagccgccctgcccat 624
||||||||||||||||| ||| || ||||| ||||||||||| ||| | ||| | ||
Sbjct: 324 gagtttgatttctaccttaacagtcacgctggaattcagggaactagcagacctacacac 383
Query: 625 taccatgttctgtgggatgagaacaactttacggctgatgggttgcaaactctcaccaac 684
|||||||| ||| ||||| |||||||| || |||||||| || ||||| ||||| |||
Sbjct: 384 taccatgtattgtttgatgaaaacaacttcactgctgatggcttacaaaccctcacaaac 443
Query: 685 aacttgtgttacacgtatgctaggtgcac 713
|| ||||| ||||||||||| || |||||
Sbjct: 444 aatttgtgctacacgtatgcaagatgcac 472
>gb|BU819274.1|BU819274 UA41BPG08 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 627
Score = 79.8 bits (40), Expect = 2e-013
Identities = 115/140 (82%)
Strand = Plus / Plus
Query: 526 cctggcactgtggtggactcgaagatctgccatccaactgagtttgatttctacctgtgc 585
|||||||||||||| || || || ||||| ||||| || || ||||| || || || ||
Sbjct: 2 cctggcactgtggttgattctaaaatctgtcatccgacggaatttgacttttatctctgt 61
Query: 586 agccatgctggcattcagggaacaagccgccctgcccattaccatgttctgtgggatgag 645
||||||||||| |||||||||||||| | || || || || |||||| |||||||||||
Sbjct: 62 agccatgctggtattcagggaacaagtagaccagcacactatcatgttttgtgggatgag 121
Query: 646 aacaactttacggctgatgg 665
||||| || || ||||||||
Sbjct: 122 aacaatttcacagctgatgg 141
>gb|BU821132.1|BU821132 UB19CPE07 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 178
Score = 79.8 bits (40), Expect = 2e-013
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 241 gggactgtctctggtggcatgatcagggagcttctcatatctttctggagggcaactgga 300
||||| || |||||||||||||||| ||| ||||||||||||||| |||| || || ||
Sbjct: 62 gggacagtgtctggtggcatgatcaaggaacttctcatatctttccggagagccacaggg 121
Query: 301 cagaaaccaaagaggatcatattctacagggatggcgtcagtga 344
||||| || |||| || ||||||||||| ||||| ||||||||
Sbjct: 122 cagaagcctcagagaattatattctacagagatggtgtcagtga 165
>gb|AJ770191.1|AJ770191 AJ770191 Populus euphratica leaf 3-6 months, adult Populus
euphratica cDNA clone P0001100008E12F1, mRNA sequence
Length = 423
Score = 77.8 bits (39), Expect = 8e-013
Identities = 126/155 (81%)
Strand = Plus / Plus
Query: 637 tgggatgagaacaactttacggctgatgggttgcaaactctcaccaacaacttgtgttac 696
|||||||||||||| || || |||||||||||||| | || || ||||| | || |||
Sbjct: 5 tgggatgagaacaagttcactgctgatgggttgcagtcccttacaaacaatctttgctac 64
Query: 697 acgtatgctaggtgcacacgctcagtatcgattgttcctcctgcatactatgctcacctg 756
|| ||||| || ||||| || || || || ||||| || |||||||||||||| || ||
Sbjct: 65 acatatgcaagatgcacccgttctgtttccattgtgccacctgcatactatgcacatctt 124
Query: 757 gcagccttccgagctcggttctacatggagccaga 791
|| || ||||||||||| ||||||||||| |||||
Sbjct: 125 gccgcattccgagctcgtttctacatggaaccaga 159
Score = 44.1 bits (22), Expect = 0.011
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 868 aatgttgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctac 927
|||| |||||||||||| | |||||| | ||||| || || |||||||| |||||||||
Sbjct: 251 aatgctgctgtgaggcccctgcctgccttgaaggagaatgttaagcgggttatgttctac 310
Query: 928 tg 929
||
Sbjct: 311 tg 312
>gb|CK096964.1|CK096964 UB34DPA12.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB34DPA12 3', mRNA sequence
Length = 646
Score = 75.8 bits (38), Expect = 3e-012
Identities = 128/158 (81%)
Strand = Plus / Minus
Query: 508 aaaagcgggaacatactgcctggcactgtggtggactcgaagatctgccatccaactgag 567
||||| || |||||| | |||||| ||||||| || || || ||||| ||||| || ||
Sbjct: 618 aaaagtggaaacatattacctggcgctgtggttgattctaaaatctgtcatccgacggaa 559
Query: 568 tttgatttctacctgtgcagccatgctggcattcagggaacaagccgccctgcccattac 627
||||| || || || || ||||||||||| |||||||||||||| | || || || ||
Sbjct: 558 tttgacttttatctctgtagccatgctggtattcagggaacaagtagaccagcacactat 499
Query: 628 catgttctgtgggatgagaacaactttacggctgatgg 665
|||||| |||||||||||||||| || || ||||||||
Sbjct: 498 catgttttgtgggatgagaacaatttcacagctgatgg 461
>gb|AI164871.1|AI164871 A070P12U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 369
Score = 73.8 bits (37), Expect = 1e-011
Identities = 112/137 (81%)
Strand = Plus / Plus
Query: 55 actattatctttggtgctgatgtgacccatccccatcctggggaagattctagtccttcc 114
|||||||| |||||||||||||| || ||||| ||||| ||||| || || || || ||
Sbjct: 86 actattatttttggtgctgatgttactcatcctcatcccggggaggactcaagcccatct 145
Query: 115 attgcagctgtggttgcttttcaagactggcctgaggttacaaagtatgcaggattggtg 174
|||||||| || || |||| ||||| ||||| |||||||| || ||||| || ||||
Sbjct: 146 attgcagccgttgtggcttcgcaagattggccagaggttaccaaatatgctggcctggtt 205
Query: 175 agtgctcaagcccatcg 191
||||||||||||||||
Sbjct: 206 tgtgctcaagcccatcg 222
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 241 gggactgtctctggtggcatgatcagggagcttctcatatc 281
||||| || |||||||||||||||| ||| |||||||||||
Sbjct: 272 gggacagtgtctggtggcatgatcaaggaacttctcatatc 312
>gb|AI165414.1|AI165414 A083p48u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 291
Score = 73.8 bits (37), Expect = 1e-011
Identities = 112/137 (81%)
Strand = Plus / Plus
Query: 55 actattatctttggtgctgatgtgacccatccccatcctggggaagattctagtccttcc 114
|||||||| |||||||||||||| || ||||| ||||| ||||| || || || || ||
Sbjct: 56 actattatttttggtgctgatgttactcatcctcatcccggggaggactcaagcccatct 115
Query: 115 attgcagctgtggttgcttttcaagactggcctgaggttacaaagtatgcaggattggtg 174
|||||||| || || |||| ||||| ||||| |||||||| || ||||| || ||||
Sbjct: 116 attgcagccgttgtggcttcgcaagattggccagaggttaccaaatatgctggcctggtt 175
Query: 175 agtgctcaagcccatcg 191
||||||||||||||||
Sbjct: 176 tgtgctcaagcccatcg 192
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 241 gggactgtctctggtggcatgatcagggagcttctcatatc 281
||||| || |||||||||||||||| ||| |||||||||||
Sbjct: 242 gggacagtgtctggtggcatgatcaaggaacttctcatatc 282
>gb|BU818866.1|BU818866 UA35CPF05 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 503
Score = 73.8 bits (37), Expect = 1e-011
Identities = 121/149 (81%)
Strand = Plus / Plus
Query: 565 gagtttgatttctacctgtgcagccatgctggcattcagggaacaagccgccctgcccat 624
||||||||||||||||| ||| || ||||| ||||||||||| ||| | ||| | ||
Sbjct: 137 gagtttgatttctaccttaacagtcacgctggaattcagggaactagcaggcctacacac 196
Query: 625 taccatgttctgtgggatgagaacaactttacggctgatgggttgcaaactctcaccaac 684
|||||||| ||| ||||| |||||||| || |||||||| || ||||| ||||| |||
Sbjct: 197 taccatgtgttgtttgatgaaaacaacttcactgctgatggcttacaaaccctcactaac 256
Query: 685 aacttgtgttacacgtatgctaggtgcac 713
|| ||||| ||||| ||||| || |||||
Sbjct: 257 aatttgtgctacacctatgcaagatgcac 285
>gb|DN490157.1|DN490157 UB48DPE03.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB48DPE03 3', mRNA sequence
Length = 544
Score = 69.9 bits (35), Expect = 2e-010
Identities = 104/127 (81%)
Strand = Plus / Minus
Query: 622 cattaccatgttctgtgggatgagaacaactttacggctgatgggttgcaaactctcacc 681
||||||||||| || |||||||||||||| ||||| |||||||||||||| | || ||
Sbjct: 532 cattaccatgtactttgggatgagaacaagtttactgctgatgggttgcagtccctgaca 473
Query: 682 aacaacttgtgttacacgtatgctaggtgcacacgctcagtatcgattgttcctcctgca 741
||||| |||| ||||| ||||| | ||||| || || || || ||||| || ||||||
Sbjct: 472 aacaatctgtgatacacatatgcacgatgcacgcgttctgtttccattgtgccacctgca 413
Query: 742 tactatg 748
|||||||
Sbjct: 412 tactatg 406
Score = 42.1 bits (21), Expect = 0.045
Identities = 55/65 (84%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 868 aatgttgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctac 927
|||| |||||||||||| ||||| ||| ||||| || || |||||||| |||||||||
Sbjct: 271 aatgctgctgtgaggcccttacccgccag-aaggagaatgtcaagcgggttatgttctac 213
Query: 928 tgcta 932
|||||
Sbjct: 212 tgcta 208
>gb|BU865267.1|BU865267 S051C12 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 233
Score = 65.9 bits (33), Expect = 3e-009
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 868 aatgttgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctac 927
|||| |||||||||||| ||||||||| | ||||| || || |||||||| |||||||||
Sbjct: 53 aatgctgctgtgaggcccttacctgccttgaaggagaatgtcaagcgggttatgttctac 112
Query: 928 tgcta 932
|||||
Sbjct: 113 tgcta 117
>gb|BU865845.1|BU865845 S059E04 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 291
Score = 65.9 bits (33), Expect = 3e-009
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 868 aatgttgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctac 927
|||| |||||||||||| ||||||||| | ||||| || || |||||||| |||||||||
Sbjct: 53 aatgctgctgtgaggcccttacctgccttgaaggagaatgtcaagcgggttatgttctac 112
Query: 928 tgcta 932
|||||
Sbjct: 113 tgcta 117
>gb|AJ773923.1|AJ773923 AJ773923 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300006F03F1, mRNA sequence
Length = 586
Score = 65.9 bits (33), Expect = 3e-009
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 868 aatgttgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctac 927
|||| |||||||||||| ||||||||| | ||||| || || |||||||| |||||||||
Sbjct: 238 aatgctgctgtgaggcctttacctgccttgaaggagaatgtcaagcgggttatgttctac 297
Query: 928 tgcta 932
|||||
Sbjct: 298 tgcta 302
Score = 56.0 bits (28), Expect = 3e-006
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 736 cctgcatactatgctcacctggcagccttccgagctcggttctacatggagccaga 791
||||||||||||||||| || || || || ||||| || |||||||||||||||||
Sbjct: 91 cctgcatactatgctcatcttgctgcatttcgagcccgtttctacatggagccaga 146
>gb|CV228921.1|CV228921 WS01911.B21_K08 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01911_K08 3', mRNA sequence
Length = 563
Score = 65.9 bits (33), Expect = 3e-009
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 727 attgttcctcctgcatactatgctcacctggcagccttccgagctcggttctacatggag 786
||||| || ||||||||||||||||| || || || || |||||||| ||||||||||||
Sbjct: 491 attgtgccacctgcatactatgctcatcttgctgcatttcgagctcgtttctacatggag 432
Query: 787 ccaga 791
|||||
Sbjct: 431 ccaga 427
Score = 65.9 bits (33), Expect = 3e-009
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 868 aatgttgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctac 927
|||| |||||||||||| ||||||||| | ||||| || || |||||||| |||||||||
Sbjct: 335 aatgctgctgtgaggcctttacctgccttgaaggagaatgtcaagcgggttatgttctac 276
Query: 928 tgcta 932
|||||
Sbjct: 275 tgcta 271
>gb|CV270196.1|CV270196 WS0151.B21_F16 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0151_F16 3', mRNA sequence
Length = 422
Score = 65.9 bits (33), Expect = 3e-009
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 868 aatgttgctgtgaggccattacctgccctcaaggaaaacgtgaagcgggtcatgttctac 927
|||| |||||||||||| ||||||||| | ||||| || || |||||||| |||||||||
Sbjct: 416 aatgctgctgtgaggcctttacctgccttgaaggagaatgtcaagcgggttatgttctac 357
Query: 928 tgcta 932
|||||
Sbjct: 356 tgcta 352
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 116,194
Number of Sequences: 369679
Number of extensions: 116194
Number of successful extensions: 32045
Number of sequences better than 0.5: 63
Number of HSP's better than 0.5 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 31862
Number of HSP's gapped (non-prelim): 145
length of query: 1118
length of database: 203,408,664
effective HSP length: 19
effective length of query: 1099
effective length of database: 196,384,763
effective search space: 215826854537
effective search space used: 215826854537
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)