BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1738955.2.1
(1271 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA932095.1|CA932095 MTU4TA.P26.G11 Aspen apex cDNA Libra... 96 4e-018
gb|CF119349.1|CF119349 MTU10CS.P16.G01 Aspen stem cDNA Libr... 96 4e-018
gb|CF119894.1|CF119894 MTU10CS.P7.F07 Aspen stem cDNA Libra... 96 4e-018
gb|CA931041.1|CA931041 MTU2TA.P1.C01 Aspen apex cDNA Librar... 90 2e-016
gb|CA925535.1|CA925535 MTU7TL.P2.G08 Aspen leaf cDNA Librar... 88 1e-015
gb|CA930772.1|CA930772 MTU2TA.P10.A06 Aspen apex cDNA Libra... 88 1e-015
gb|AY435100.1| Populus tremula x Populus tremuloides alpha-... 88 1e-015
gb|CA931089.1|CA931089 MTU2TA.P1.H04 Aspen apex cDNA Librar... 82 6e-014
gb|CA933376.1|CA933376 MTU5CS.P7.B09 Aspen stem cDNA Librar... 82 6e-014
gb|BI068323.1|BI068323 C020P28U Populus strain T89 leaves P... 80 2e-013
gb|BI070667.1|BI070667 C041P74U Populus strain T89 leaves P... 80 2e-013
gb|CA934619.1|CA934619 MTU5TS.P21.D05 Aspen stem cDNA Libra... 80 2e-013
gb|CK088219.1|CK088219 A044P14.3pR Hybrid aspen plasmid lib... 80 2e-013
gb|CA934741.1|CA934741 MTU5TS.P23.B05 Aspen stem cDNA Libra... 72 6e-011
gb|CA932826.1|CA932826 MTU5CS.P18.A02 Aspen stem cDNA Libra... 68 9e-010
gb|BI072028.1|BI072028 C068P05U Populus strain T89 leaves P... 62 6e-008
gb|CA932314.1|CA932314 MTU5CS.P11.D03 Aspen stem cDNA Libra... 62 6e-008
gb|CA932791.1|CA932791 MTU5CS.P17.D11 Aspen stem cDNA Libra... 62 6e-008
gb|BI071981.1|BI071981 C067P17U Populus strain T89 leaves P... 60 2e-007
gb|BU813204.1|BU813204 N006E10 Populus bark cDNA library Po... 60 2e-007
gb|BU815493.1|BU815493 N042D11 Populus bark cDNA library Po... 60 2e-007
gb|BU837829.1|BU837829 T106B06 Populus apical shoot cDNA li... 56 3e-006
gb|AJ775049.1|AJ775049 AJ775049 Populus euphratica shoot 3-... 56 3e-006
gb|CN520784.1|CN520784 GQ0108.B3_L20 GQ010 Populus trichoca... 54 1e-005
gb|CN523530.1|CN523530 GQ015M11.T3_D06 GQ015 Populus tricho... 54 1e-005
gb|DT490390.1|DT490390 WS02544.B21_N10 PT-MB-N-A-15 Populus... 54 1e-005
gb|CF119515.1|CF119515 MTU10CS.P2.H02 Aspen stem cDNA Libra... 52 5e-005
gb|CN524661.1|CN524661 GQ015M15.T3_F10 GQ015 Populus tricho... 52 5e-005
gb|CV130528.1|CV130528 B9SP03c05 Populus stem seasonal libr... 52 5e-005
gb|DT477598.1|DT477598 WS02520.BR_G18 PT-MB-N-A-15 Populus ... 52 5e-005
gb|DT480457.1|DT480457 WS02528.BR_P11 PT-MB-N-A-15 Populus ... 52 5e-005
gb|DT482653.1|DT482653 WS02520.B21_G18 PT-MB-N-A-15 Populus... 52 5e-005
gb|DT483724.1|DT483724 WS02523.B21_G13 PT-MB-N-A-15 Populus... 52 5e-005
gb|DT485712.1|DT485712 WS02528.B21_P11 PT-MB-N-A-15 Populus... 52 5e-005
gb|DT490252.1|DT490252 WS02544.B21_H07 PT-MB-N-A-15 Populus... 52 5e-005
gb|DT510215.1|DT510215 WS02425.BR_O13 PTxD-ICC-N-A-14 Popul... 52 5e-005
gb|DT514833.1|DT514833 WS02425.B21_O13 PTxD-ICC-N-A-14 Popu... 52 5e-005
gb|DT519500.1|DT519500 WS02441.B21_M17 PTxD-ICC-N-A-14 Popu... 52 5e-005
gb|DV464731.1|DV464731 MTUNUL1.P30.B05 NUL Populus fremonti... 52 5e-005
gb|AY435101.1| Populus tremula x Populus tremuloides alpha-... 52 5e-005
gb|BI071873.1|BI071873 C065P28U Populus strain T89 leaves P... 48 8e-004
gb|BU827896.1|BU827896 K011P11P Populus apical shoot cDNA l... 48 8e-004
gb|BU867573.1|BU867573 M101G12 Populus flower cDNA library ... 48 8e-004
gb|BU868621.1|BU868621 M118B09 Populus flower cDNA library ... 48 8e-004
gb|CA931232.1|CA931232 MTU2TA.P4.D07 Aspen apex cDNA Librar... 48 8e-004
gb|CK109527.1|CK109527 N017H10 Populus bark cDNA library Po... 48 8e-004
gb|CN519990.1|CN519990 GQ0108.B3_K15 GQ010 Populus trichoca... 48 8e-004
gb|CN520597.1|CN520597 GQ0105.B3_E19 GQ010 Populus trichoca... 48 8e-004
gb|CN523732.1|CN523732 GQ015M10.T3_E03 GQ015 Populus tricho... 48 8e-004
gb|CV240405.1|CV240405 WS0251.B21_E17 PT-MB-N-A-15 Populus ... 48 8e-004
gb|CV261926.1|CV261926 WS02018.B21_C16 PTxN-IB-N-A-11 Popul... 48 8e-004
gb|CV272399.1|CV272399 WS0157.B21_I20 PTxN-IB-A-6 Populus t... 48 8e-004
gb|CX180849.1|CX180849 D06_45-117_08.ab1 leaf inoculated wi... 48 8e-004
gb|DT490247.1|DT490247 WS02544.B21_H02 PT-MB-N-A-15 Populus... 48 8e-004
gb|DT490961.1|DT490961 WS02546.C21.1_G23 PT-MB-N-A-15 Popul... 48 8e-004
gb|DT492462.1|DT492462 WS02550.C21_M18 PT-MB-N-A-15 Populus... 48 8e-004
gb|DT493211.1|DT493211 WS02553.C21_L14 PT-MB-N-A-15 Populus... 48 8e-004
gb|DT505767.1|DT505767 WS01811.C21_M21 PTxD-IL-N-A-9 Populu... 48 8e-004
gb|DT507035.1|DT507035 WS02417.BR_C22 PTxD-ICC-N-A-14 Popul... 48 8e-004
gb|BU815416.1|BU815416 N041D08 Populus bark cDNA library Po... 46 0.003
gb|BU893884.1|BU893884 P084A04 Populus petioles cDNA librar... 46 0.003
gb|CB184967.1|CB184967 PopSC00101 Poplar SC cDNA library Po... 46 0.003
gb|CF119781.1|CF119781 MTU10CS.P6.C03 Aspen stem cDNA Libra... 46 0.003
gb|CX658121.1|CX658121 PO01009F10 Poplar SC cDNA library Po... 46 0.003
gb|DT520342.1|DT520342 WS02447.B21_E17 PTxD-ICC-N-A-14 Popu... 46 0.003
gb|DV463768.1|DV463768 MTUNUL1.P2.B10 NUL Populus fremontii... 46 0.003
gb|BU824007.1|BU824007 UB59CPB10 Populus tremula cambium cD... 44 0.013
gb|BU892415.1|BU892415 P063C07 Populus petioles cDNA librar... 44 0.013
gb|BU893810.1|BU893810 P083A04 Populus petioles cDNA librar... 44 0.013
gb|CB240458.1|CB240458 PopSC00443 Poplar SC cDNA library Po... 44 0.013
gb|AI161578.1|AI161578 A002P74U Hybrid aspen plasmid librar... 42 0.051
gb|AI165287.1|AI165287 A080P42U Hybrid aspen plasmid librar... 42 0.051
gb|BI127499.1|BI127499 G061P54Y Populus cambium cDNA librar... 42 0.051
gb|BI130398.1|BI130398 G105P12Y Populus cambium cDNA librar... 42 0.051
gb|BI131229.1|BI131229 G117P34Y Populus cambium cDNA librar... 42 0.051
gb|BU815417.1|BU815417 N041D09 Populus bark cDNA library Po... 42 0.051
gb|BU836300.1|BU836300 T085A03 Populus apical shoot cDNA li... 42 0.051
gb|CA923726.1|CA923726 MTU7CL.P14.B11 Aspen leaf cDNA Libra... 42 0.051
gb|CA930506.1|CA930506 MTU4CA.P23.D05 Aspen apex cDNA Libra... 42 0.051
gb|CA933853.1|CA933853 MTU3TS.P13.E07 Aspen stem cDNA Libra... 42 0.051
gb|CA826407.1|CA826407 R77F11 two-month-old roots from clon... 42 0.051
gb|CK089266.1|CK089266 B007P05.3pR Hybrid aspen plasmid lib... 42 0.051
gb|CK103443.1|CK103443 G117P34.5pR Populus tension wood cDN... 42 0.051
gb|CN523977.1|CN523977 GQ015M07.T3_G12 GQ015 Populus tricho... 42 0.051
gb|CV130860.1|CV130860 X9SP06f07 Populus stem seasonal libr... 42 0.051
gb|CV259380.1|CV259380 WS02011.B21_D08 PTxN-IB-N-A-11 Popul... 42 0.051
gb|CV265899.1|CV265899 WS02028.B21_I23 PTxN-IB-N-A-11 Popul... 42 0.051
gb|CV272777.1|CV272777 WS0158.B21_K22 PTxN-IB-A-6 Populus t... 42 0.051
gb|BP926887.1|BP926887 BP926887 full-length enriched poplar... 42 0.051
gb|DT493606.1|DT493606 WS0111.BR_N24 PT-P-FL-A-2 Populus tr... 42 0.051
gb|DT498875.1|DT498875 WS0116.BR_J18 PT-P-FL-A-2 Populus tr... 42 0.051
gb|DT498988.1|DT498988 WS0116.BR_O20 PT-P-FL-A-2 Populus tr... 42 0.051
gb|DT500134.1|DT500134 PX0011.BR_F03 PT-X-FL-A-1 Populus tr... 42 0.051
gb|DT500250.1|DT500250 PX0011.BR_L17 PT-X-FL-A-1 Populus tr... 42 0.051
gb|DT500322.1|DT500322 PX0015.BR_B14 PT-X-FL-A-1 Populus tr... 42 0.051
gb|DT500905.1|DT500905 PX0019.BR_M05 PT-X-FL-A-1 Populus tr... 42 0.051
gb|DT521517.1|DT521517 WS02034.B21_I03 PTxN-IB-N-A-11 Popul... 42 0.051
gb|DT526688.1|DT526688 WS02048.C21_L07 PTxN-IB-N-A-11 Popul... 42 0.051
gb|AY435099.1| Populus tremula x Populus tremuloides alpha-... 42 0.051
gb|BU827520.1|BU827520 K004P15P Populus apical shoot cDNA l... 40 0.20
gb|BU832685.1|BU832685 T037A12 Populus apical shoot cDNA li... 40 0.20
gb|BU866067.1|BU866067 S062C09 Populus imbibed seed cDNA li... 40 0.20
gb|BU867976.1|BU867976 M106F07 Populus flower cDNA library ... 40 0.20
gb|BU892155.1|BU892155 P060A10 Populus petioles cDNA librar... 40 0.20
gb|CF229000.1|CF229000 PtaXM0020A10A1002 Poplar cDNA librar... 40 0.20
gb|CF236133.1|CF236133 PtaJXT1A5A0501 Poplar cDNA library f... 40 0.20
gb|DT485011.1|DT485011 WS02527.B21_A18 PT-MB-N-A-15 Populus... 40 0.20
>gb|CA932095.1|CA932095 MTU4TA.P26.G11 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 506
Score = 95.6 bits (48), Expect = 4e-018
Identities = 148/180 (82%), Gaps = 1/180 (0%)
Strand = Plus / Minus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
||||||||||||||| ||||||||||| | ||||||| ||||||||| || | |||||
Sbjct: 208 gttgctctgccagttttggccccagtttcttgacatgg-ctgccaccctgttttcgagcc 150
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
||||| || || || || || || ||||| || | || ||||| | ||| ||||||||
Sbjct: 149 tttgattgaaactgagtgaacatctccggcaccaccaacattggtgatcaggaccaggtt 90
Query: 693 gaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggcaccct 752
|||||||||||||||||||||||| || || ||||| |||||||| || || ||||||||
Sbjct: 89 gaagtaggagtggccgttgatggtaaatctaatccctcccttcttaacacaaggcaccct 30
>gb|CF119349.1|CF119349 MTU10CS.P16.G01 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 782
Score = 95.6 bits (48), Expect = 4e-018
Identities = 147/180 (81%)
Strand = Plus / Minus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
||||||||||||||| ||||||||||| | ||||||| |||||||| || | |||||
Sbjct: 339 gttgctctgccagttttggccccagtttcttgacatggcttgccaccctgttttcgagcc 280
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
||||| || || || || || || ||||| || | || ||||| | ||| ||||||||
Sbjct: 279 tttgattgaaactgaatggacatctccggcaccaccaacattggtgatcaggaccaggtt 220
Query: 693 gaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggcaccct 752
|||||||||||||||||||||||| || || ||||| |||||||| || || ||||||||
Sbjct: 219 gaagtaggagtggccgttgatggtaaatctaatccctcccttcttaacacaaggcaccct 160
>gb|CF119894.1|CF119894 MTU10CS.P7.F07 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 617
Score = 95.6 bits (48), Expect = 4e-018
Identities = 147/180 (81%)
Strand = Plus / Minus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
||||||||||||||| ||||||||||| | ||||||| |||||||| || | |||||
Sbjct: 339 gttgctctgccagttttggccccagtttcttgacatggcttgccaccctgttttcgagcc 280
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
||||| || || || || || || ||||| || | || ||||| | ||| ||||||||
Sbjct: 279 tttgattgaaactgaatggacatctccggcaccaccaacattggtgatcaggaccaggtt 220
Query: 693 gaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggcaccct 752
|||||||||||||||||||||||| || || ||||| |||||||| || || ||||||||
Sbjct: 219 gaagtaggagtggccgttgatggtaaatctaatccctcccttcttaacacaaggcaccct 160
>gb|CA931041.1|CA931041 MTU2TA.P1.C01 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 560
Score = 89.7 bits (45), Expect = 2e-016
Identities = 136/165 (82%), Gaps = 1/165 (0%)
Strand = Plus / Plus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
||||||||||||||| ||||||||||| | ||||||| ||||||||| || | |||||
Sbjct: 353 gttgctctgccagttttggccccagtttcttgacatgg-ctgccaccctgttttcgagcc 411
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
||||| || || || || || || ||||| || | || ||||| | ||| ||||||||
Sbjct: 412 tttgattgaaactgagtgaacatctccggcaccaccaacattggtgatcaggaccaggtt 471
Query: 693 gaagtaggagtggccgttgatggtgaacctgatcccgcccttctt 737
|||||||||||||||||||||||| || || ||||| ||||||||
Sbjct: 472 gaagtaggagtggccgttgatggtaaatctaatccctcccttctt 516
>gb|CA925535.1|CA925535 MTU7TL.P2.G08 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 546
Score = 87.7 bits (44), Expect = 1e-015
Identities = 146/180 (81%)
Strand = Plus / Plus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
||||||||||||||| ||||||||||| | ||||||| |||||||| || | |||||
Sbjct: 349 gttgctctgccagttttggccccagtttcttgacatggcttgccaccctgttttcgagcc 408
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
|||| || || || || || || ||||| || | || ||||| | ||| ||||||||
Sbjct: 409 tctgattgaaactgagtgaacatctccggcaccaccaacattggtgatcaggaccaggtt 468
Query: 693 gaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggcaccct 752
|||||||||||||||||||||||| || || ||||| |||||||| || || ||||||||
Sbjct: 469 gaagtaggagtggccgttgatggtaaatctaatccctcccttcttaacacaaggcaccct 528
>gb|CA930772.1|CA930772 MTU2TA.P10.A06 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 516
Score = 87.7 bits (44), Expect = 1e-015
Identities = 147/180 (81%), Gaps = 1/180 (0%)
Strand = Plus / Minus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
||||||||||||||| ||||||||||| | ||||||| ||||||||| || | |||||
Sbjct: 208 gttgctctgccagttttggccccagtttcttgacatgg-ctgccaccctgttttcgagcc 150
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
||||| || || || || || || ||||| || | || ||||| | ||| ||||||||
Sbjct: 149 tttgattgaaactgagtgaacatctccggcaccaccaacattggtgatcaggaccaggtt 90
Query: 693 gaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggcaccct 752
|||||||||||||||||||| ||| || || ||||| |||||||| || || ||||||||
Sbjct: 89 gaagtaggagtggccgttgacggtaaatctaatccctcccttcttaacacaaggcaccct 30
>gb|AY435100.1| Populus tremula x Populus tremuloides alpha-expansin 2 (Exp2) mRNA,
complete cds
Length = 1084
Score = 87.7 bits (44), Expect = 1e-015
Identities = 146/180 (81%)
Strand = Plus / Minus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
||||||||||||||| ||||||||||| | ||||||| |||||||| || | |||||
Sbjct: 685 gttgctctgccagttttggccccagtttcttgacatggcttgccaccctgttttcgagcc 626
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
||||| || || || || || || ||||| || | || ||||| | ||| ||||||||
Sbjct: 625 tttgattgaaactgagtgaacatctccggcaccaccaacattggtgatcaggaccaggtt 566
Query: 693 gaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggcaccct 752
|||||||||||||||||||||||| || || || || |||||||| || || ||||||||
Sbjct: 565 gaagtaggagtggccgttgatggtaaatctaattcctcccttcttaacacaaggcaccct 506
>gb|CA931089.1|CA931089 MTU2TA.P1.H04 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 555
Score = 81.8 bits (41), Expect = 6e-014
Identities = 135/165 (81%), Gaps = 1/165 (0%)
Strand = Plus / Plus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
||||||||||||||| ||||||||||| | ||||||| || |||||| || | |||||
Sbjct: 350 gttgctctgccagttttggccccagtttcttgacatgg-ctaccaccctgttttcgagcc 408
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
||||| || || || || || || ||||| || | || ||||| | ||| ||||||||
Sbjct: 409 tttgattgaaactgagtgaacatctccggcaccaccaacattggtgatcaggaccaggtt 468
Query: 693 gaagtaggagtggccgttgatggtgaacctgatcccgcccttctt 737
|||||||||||||||||||||||| || || ||||| ||||||||
Sbjct: 469 gaagtaggagtggccgttgatggtaaatctaatccctcccttctt 513
>gb|CA933376.1|CA933376 MTU5CS.P7.B09 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 605
Score = 81.8 bits (41), Expect = 6e-014
Identities = 169/212 (79%)
Strand = Plus / Plus
Query: 526 tcgctggcggtgacctggaaggacaggctctggccgtcgaggagcgagttgctctgccag 585
||||||| ||||||||| || || ||||| || |||| |||| | |||||||||||||
Sbjct: 380 tcgctggtggtgacctgaaaagataggctttgaccgttgaggtaagtgttgctctgccag 439
Query: 586 ttctggccccagttgcgggacatgggctgccacccggtgctggagcccttgatggacacg 645
|| ||||||||||| | ||||||| |||||||| || | ||||| ||||| || ||
Sbjct: 440 ttttggccccagtttcttgacatggcttgccaccctgttttcgagcctttgattgaaact 499
Query: 646 gactgcacgtccccggcgccggccacgttggtcaccagcaccaggttgaagtaggagtgg 705
|| || || || ||||| | | || ||||| | ||| |||| ||||||||||||||||
Sbjct: 500 gaatggacatctccggcacaaccaacattggtgatcaggaccangttgaagtaggagtgg 559
Query: 706 ccgttgatggtgaacctgatcccgcccttctt 737
||||||||||| || || ||||| ||||||||
Sbjct: 560 ccgttgatggtaaatctaatccctcccttctt 591
>gb|BI068323.1|BI068323 C020P28U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 392
Score = 79.8 bits (40), Expect = 2e-013
Identities = 118/144 (81%)
Strand = Plus / Minus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
||||||||||||||| ||||||||||| | ||||||| |||||||| || | |||||
Sbjct: 148 gttgctctgccagttttggccccagtttcttgacatggcttgccaccctgttttcgagcc 89
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
||||| || || || || || || ||||| || | || ||||| | ||| ||||||||
Sbjct: 88 tttgattgaaactgagtgaacatctccggcaccaccaacattggtgatcaggaccaggtt 29
Query: 693 gaagtaggagtggccgttgatggt 716
||||||||||||||||||||||||
Sbjct: 28 gaagtaggagtggccgttgatggt 5
>gb|BI070667.1|BI070667 C041P74U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 384
Score = 79.8 bits (40), Expect = 2e-013
Identities = 118/144 (81%)
Strand = Plus / Minus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
||||||||||||||| ||||||||||| | ||||||| |||||||| || | |||||
Sbjct: 149 gttgctctgccagttttggccccagtttcttgacatggcttgccaccctgttttcgagcc 90
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
||||| || || || || || || ||||| || | || ||||| | ||| ||||||||
Sbjct: 89 tttgattgaaactgagtgaacatctccggcaccaccaacattggtgatcaggaccaggtt 30
Query: 693 gaagtaggagtggccgttgatggt 716
||||||||||||||||||||||||
Sbjct: 29 gaagtaggagtggccgttgatggt 6
>gb|CA934619.1|CA934619 MTU5TS.P21.D05 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 496
Score = 79.8 bits (40), Expect = 2e-013
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 685 accaggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcac 744
|||||||||||||||||||||||||||||||| || || ||||| |||||||| || ||
Sbjct: 97 accaggttgaagtaggagtggccgttgatggtaaatctaatccctcccttcttaacacaa 38
Query: 745 ggcaccct 752
||||||||
Sbjct: 37 ggcaccct 30
Score = 48.1 bits (24), Expect = 8e-004
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccaccc 620
||||||||||||||| ||||||||||| | ||||||| ||||||||
Sbjct: 209 gttgctctgccagttttggccccagtttcttgacatggcttgccaccc 162
>gb|CK088219.1|CK088219 A044P14.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A044P14 3', mRNA sequence
Length = 731
Score = 79.8 bits (40), Expect = 2e-013
Identities = 145/180 (80%)
Strand = Plus / Plus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
||||||||||||||| ||||||||||| | ||||||| |||||||| || | |||||
Sbjct: 419 gttgctctgccagttttggccccagtttcttgacatggcttgccaccctgttttcgagcc 478
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
||||| || || || || || || ||||| || | || ||||| | ||| ||||||||
Sbjct: 479 tttgattgaaactgagtgaacatctccggcaccaccaacattggtgatcaggaccaggtt 538
Query: 693 gaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggcaccct 752
||||||||||||||||||||||| || || || || |||||||| || || ||||||||
Sbjct: 539 gaagtaggagtggccgttgatggaaaatctaattcctcccttcttaacacaaggcaccct 598
>gb|CA934741.1|CA934741 MTU5TS.P23.B05 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 546
Score = 71.9 bits (36), Expect = 6e-011
Identities = 144/180 (80%)
Strand = Plus / Plus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
||||||||||||||| ||||||||||| | ||||||| |||||||| | | |||||
Sbjct: 352 gttgctctgccagttttggccccagtttcttgacatggcttgccaccctggtttcgagcc 411
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
||||| || || || || || || ||||| || | || ||||| | ||| ||||||||
Sbjct: 412 tttgattgaaactgagtgaacatctccggcaccaccaacattggtgatcaggaccaggtt 471
Query: 693 gaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcacggcaccct 752
||||||||||||| |||||||||| || || ||||| ||||||| || || ||||||||
Sbjct: 472 gaagtaggagtggtcgttgatggtaaatctaatcccttccttcttaacacaaggcaccct 531
>gb|CA932826.1|CA932826 MTU5CS.P18.A02 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 690
Score = 67.9 bits (34), Expect = 9e-010
Identities = 121/150 (80%)
Strand = Plus / Minus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
|||||||||||| ||||| |||||||| | ||||| || ||||| || || ||||| ||
Sbjct: 639 gttgctctgccaattctgcccccagttccttgacattggttgccaaccagtcctggaccc 580
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
|||||| ||||| || || || || || || ||| | ||||| || | ||| || || ||
Sbjct: 579 cttgatcgacacagaatgtacatcaccagcaccgccaacgttagtgatcaggactagatt 520
Query: 693 gaagtaggagtggccgttgatggtgaacct 722
|||||||||||| |||||||| ||||||||
Sbjct: 519 gaagtaggagtgaccgttgattgtgaacct 490
>gb|BI072028.1|BI072028 C068P05U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 437
Score = 61.9 bits (31), Expect = 6e-008
Identities = 121/151 (80%)
Strand = Plus / Minus
Query: 571 gagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggag 630
||||| ||||||||||| ||||||||||| | ||||| | |||||||| || || ||
Sbjct: 198 gagttactctgccagttttggccccagtttctcgacattgattgccacccagttctcgaa 139
Query: 631 cccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccagg 690
|| ||||||||||| || ||||| || || || ||| | || ||||| | ||| || |
Sbjct: 138 cctttgatggacactgaatgcacatcgccagcaccgccaacattggtaatcaggactaaa 79
Query: 691 ttgaagtaggagtggccgttgatggtgaacc 721
|||||||| ||||||||||||||| ||||||
Sbjct: 78 ttgaagtatgagtggccgttgatgttgaacc 48
>gb|CA932314.1|CA932314 MTU5CS.P11.D03 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 559
Score = 61.9 bits (31), Expect = 6e-008
Identities = 121/151 (80%)
Strand = Plus / Minus
Query: 571 gagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggag 630
||||| ||||||||||| ||||||||||| | ||||| | |||||||| || || ||
Sbjct: 440 gagttactctgccagttttggccccagtttctcgacattgattgccacccagttctcgaa 381
Query: 631 cccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccagg 690
|| ||||||||||| || ||||| || || || ||| | || ||||| | ||| || |
Sbjct: 380 cctttgatggacactgaatgcacatcgccagcaccgccaacattggtaatcaggactaaa 321
Query: 691 ttgaagtaggagtggccgttgatggtgaacc 721
|||||||| ||||||||||||||| ||||||
Sbjct: 320 ttgaagtatgagtggccgttgatgttgaacc 290
>gb|CA932791.1|CA932791 MTU5CS.P17.D11 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 559
Score = 61.9 bits (31), Expect = 6e-008
Identities = 121/151 (80%)
Strand = Plus / Plus
Query: 571 gagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggag 630
||||| ||||||||||| ||||||||||| | ||||| | |||||||| || || ||
Sbjct: 120 gagttactctgccagttttggccccagtttctcgacattgattgccacccagttctcgaa 179
Query: 631 cccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccagg 690
|| ||||||||||| || ||||| || || || ||| | || ||||| | ||| || |
Sbjct: 180 cctttgatggacactgaatgcacatcgccagcaccgccaacattggtaatcaggactaaa 239
Query: 691 ttgaagtaggagtggccgttgatggtgaacc 721
|||||||| ||||||||||||||| ||||||
Sbjct: 240 ttgaagtatgagtggccgttgatgttgaacc 270
>gb|BI071981.1|BI071981 C067P17U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 399
Score = 60.0 bits (30), Expect = 2e-007
Identities = 120/150 (80%)
Strand = Plus / Minus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
|||||||||||| || || |||||||| | ||||| |||||||| || || ||||| ||
Sbjct: 277 gttgctctgccaattttgcccccagttccttgacattggctgccaaccagtcctggaccc 218
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
|||||| ||||| || || || || || || ||| | ||||| || | ||| || || ||
Sbjct: 217 cttgatcgacacagaatgtacatcaccagcaccgccaacgttagtgatcaggactagatt 158
Query: 693 gaagtaggagtggccgttgatggtgaacct 722
|||||||||||| ||||||| ||||||||
Sbjct: 157 gaagtaggagtgaccgttgactgtgaacct 128
>gb|BU813204.1|BU813204 N006E10 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 737
Score = 60.0 bits (30), Expect = 2e-007
Identities = 120/150 (80%)
Strand = Plus / Minus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
|||||||||||| || || |||||||| | ||||| || ||||| || || ||||| ||
Sbjct: 395 gttgctctgccaattttgcccccagttccttgacattggttgccaaccagtcctggaccc 336
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
|||||| ||||| || ||||| || || || ||| | ||||| || | ||| || || ||
Sbjct: 335 cttgatcgacacagaatgcacatcaccagcaccgccaacgttagtgatcaggactagatt 276
Query: 693 gaagtaggagtggccgttgatggtgaacct 722
|||||||||||| ||||||| ||||||||
Sbjct: 275 gaagtaggagtgaccgttgactgtgaacct 246
>gb|BU815493.1|BU815493 N042D11 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 685
Score = 60.0 bits (30), Expect = 2e-007
Identities = 120/150 (80%)
Strand = Plus / Minus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
|||||||||||| || || |||||||| | ||||| |||||||| || || ||||| ||
Sbjct: 548 gttgctctgccaattttgcccccagttccttgacattggctgccaaccagtcctggaccc 489
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
|||||| ||||| || || || || || || ||| | ||||| || | ||| || || ||
Sbjct: 488 cttgatcgacacagaatgtacatcaccagcaccgccaacgttagtgatcaggactagatt 429
Query: 693 gaagtaggagtggccgttgatggtgaacct 722
|||||||||||| ||||||| ||||||||
Sbjct: 428 gaagtaggagtgaccgttgactgtgaacct 399
>gb|BU837829.1|BU837829 T106B06 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 659
Score = 56.0 bits (28), Expect = 3e-006
Identities = 112/140 (80%)
Strand = Plus / Minus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
|||||||||||| || || |||||||| | ||||| |||||||| || || ||||| ||
Sbjct: 142 gttgctctgccaattttgcccccagttccttgacattggctgccaaccagtcctggaccc 83
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
|||||| ||||| || || || || || || ||| | ||||| || | ||| || || ||
Sbjct: 82 cttgatcgacacagaatgtacatcaccagcaccgccaacgttagtgatcaggactagatt 23
Query: 693 gaagtaggagtggccgttga 712
|||||||||||| |||||||
Sbjct: 22 gaagtaggagtgaccgttga 3
>gb|AJ775049.1|AJ775049 AJ775049 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300027C03F1, mRNA sequence
Length = 578
Score = 56.0 bits (28), Expect = 3e-006
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 685 accaggttgaagtaggagtggccgttgatggtgaacctgatcccgcccttcttcacgcac 744
|||| ||||||||||||||| ||||||||||| || || || || |||||||| || ||
Sbjct: 565 accaagttgaagtaggagtgaccgttgatggtaaatctaattcctcccttcttaacacaa 506
Query: 745 ggcaccct 752
||||||||
Sbjct: 505 ggcaccct 498
>gb|CN520784.1|CN520784 GQ0108.B3_L20 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_L20 5', mRNA sequence
Length = 821
Score = 54.0 bits (27), Expect = 1e-005
Identities = 120/151 (79%)
Strand = Plus / Minus
Query: 571 gagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggag 630
||||| ||||||||||| ||||||||||| | ||||| | |||||||| || || ||
Sbjct: 587 gagttactctgccagttttggccccagtttctcgacattgattgccacccagttctcgaa 528
Query: 631 cccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccagg 690
|| ||||||| ||| || ||||| || || || ||| | || ||||| | ||| || |
Sbjct: 527 cctttgatggccactgaatgcacatcgccagcaccgccaacattggtaatcaggactaaa 468
Query: 691 ttgaagtaggagtggccgttgatggtgaacc 721
|||||||| |||||||| |||||||||||||
Sbjct: 467 ttgaagtatgagtggccattgatggtgaacc 437
>gb|CN523530.1|CN523530 GQ015M11.T3_D06 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M11_D06 5', mRNA sequence
Length = 779
Score = 54.0 bits (27), Expect = 1e-005
Identities = 120/151 (79%)
Strand = Plus / Minus
Query: 571 gagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggag 630
||||| ||||||||||| ||||||||||| | ||||| | |||||||| || || ||
Sbjct: 582 gagttactctgccagttttggccccagtttctcgacattgattgccacccagttctcgaa 523
Query: 631 cccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccagg 690
|| ||||||| ||| || ||||| || || || ||| | || ||||| | ||| || |
Sbjct: 522 cctttgatggccactgaatgcacatcgccagcaccgccaacattggtaatcaggactaaa 463
Query: 691 ttgaagtaggagtggccgttgatggtgaacc 721
|||||||| |||||||| |||||||||||||
Sbjct: 462 ttgaagtatgagtggccattgatggtgaacc 432
>gb|DT490390.1|DT490390 WS02544.B21_N10 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02544_N10 3', mRNA sequence
Length = 866
Score = 54.0 bits (27), Expect = 1e-005
Identities = 120/151 (79%)
Strand = Plus / Plus
Query: 571 gagttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggag 630
||||| ||||||||||| ||||||||||| | ||||| | |||||||| || || ||
Sbjct: 322 gagttactctgccagttttggccccagtttctcgacattgattgccacccagttctcgaa 381
Query: 631 cccttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccagg 690
|| ||||||| ||| || ||||| || || || ||| | || ||||| | ||| || |
Sbjct: 382 cctttgatggccactgaatgcacatcgccagcaccgccaacattggtaatcaggactaaa 441
Query: 691 ttgaagtaggagtggccgttgatggtgaacc 721
|||||||| |||||||| |||||||||||||
Sbjct: 442 ttgaagtatgagtggccattgatggtgaacc 472
>gb|CF119515.1|CF119515 MTU10CS.P2.H02 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 225
Score = 52.0 bits (26), Expect = 5e-005
Identities = 119/150 (79%)
Strand = Plus / Minus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
|||||| |||||||| || |||||||| | ||||| || ||||| || || || || ||
Sbjct: 172 gttgctttgccagttttgcccccagttccttgacattggttgccatccagtcctagaccc 113
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
||||| |||||| | ||||| || || || ||| | ||||| || | ||| || || ||
Sbjct: 112 cttgacggacacagcatgcacatcaccagcaccgccaacgttagtgatcaggactagatt 53
Query: 693 gaagtaggagtggccgttgatggtgaacct 722
|||||||||||| |||||||| ||||||||
Sbjct: 52 gaagtaggagtgaccgttgattgtgaacct 23
>gb|CN524661.1|CN524661 GQ015M15.T3_F10 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M15_F10 5', mRNA sequence
Length = 755
Score = 52.0 bits (26), Expect = 5e-005
Identities = 119/150 (79%)
Strand = Plus / Minus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
|||||||||||| || || |||||||| | ||||| || ||||| || || ||||| ||
Sbjct: 270 gttgctctgccaattttgcccccagttccttgacattggttgccaaccagtcctggaccc 211
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
|||||||||||| || || || || || || || | ||||| || | ||| || || ||
Sbjct: 210 cttgatggacacagaatgtacatcaccagcaccaccaacgttagtgatcaggactagatt 151
Query: 693 gaagtaggagtggccgttgatggtgaacct 722
|||||| |||||||| ||||| ||||||||
Sbjct: 150 gaagtaagagtggccattgattgtgaacct 121
>gb|CV130528.1|CV130528 B9SP03c05 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 910
Score = 52.0 bits (26), Expect = 5e-005
Identities = 119/150 (79%)
Strand = Plus / Minus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
|||||||||||| || || |||||||| | ||||| || ||||| || || ||||| ||
Sbjct: 731 gttgctctgccaattttgcccccagttccttgacattggttgccaaccagtcctggaccc 672
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
|||||||||||| || || || || || || || | ||||| || | ||| || || ||
Sbjct: 671 cttgatggacacagaatgtacatcaccagcaccaccaacgttagtgatcaggactagatt 612
Query: 693 gaagtaggagtggccgttgatggtgaacct 722
|||||| |||||||| ||||| ||||||||
Sbjct: 611 gaagtaagagtggccattgattgtgaacct 582
>gb|DT477598.1|DT477598 WS02520.BR_G18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02520_G18 5', mRNA sequence
Length = 845
Score = 52.0 bits (26), Expect = 5e-005
Identities = 119/150 (79%)
Strand = Plus / Minus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
|||||||||||| || || |||||||| | ||||| || ||||| || || ||||| ||
Sbjct: 671 gttgctctgccaattttgcccccagttccttgacattggttgccaaccagtcctggaccc 612
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
|||||||||||| || || || || || || || | ||||| || | ||| || || ||
Sbjct: 611 cttgatggacacagaatgtacatcaccagcaccaccaacgttagtgatcaggactagatt 552
Query: 693 gaagtaggagtggccgttgatggtgaacct 722
|||||| |||||||| ||||| ||||||||
Sbjct: 551 gaagtaagagtggccattgattgtgaacct 522
>gb|DT480457.1|DT480457 WS02528.BR_P11 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02528_P11 5', mRNA sequence
Length = 882
Score = 52.0 bits (26), Expect = 5e-005
Identities = 119/150 (79%)
Strand = Plus / Minus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
|||||||||||| || || |||||||| | ||||| || ||||| || || ||||| ||
Sbjct: 673 gttgctctgccaattttgcccccagttccttgacattggttgccaaccagtcctggaccc 614
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
|||||||||||| || || || || || || || | ||||| || | ||| || || ||
Sbjct: 613 cttgatggacacagaatgtacatcaccagcaccaccaacgttagtgatcaggactagatt 554
Query: 693 gaagtaggagtggccgttgatggtgaacct 722
|||||| |||||||| ||||| ||||||||
Sbjct: 553 gaagtaagagtggccattgattgtgaacct 524
>gb|DT482653.1|DT482653 WS02520.B21_G18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02520_G18 3', mRNA sequence
Length = 843
Score = 52.0 bits (26), Expect = 5e-005
Identities = 119/150 (79%)
Strand = Plus / Plus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
|||||||||||| || || |||||||| | ||||| || ||||| || || ||||| ||
Sbjct: 583 gttgctctgccaattttgcccccagttccttgacattggttgccaaccagtcctggaccc 642
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
|||||||||||| || || || || || || || | ||||| || | ||| || || ||
Sbjct: 643 cttgatggacacagaatgtacatcaccagcaccaccaacgttagtgatcaggactagatt 702
Query: 693 gaagtaggagtggccgttgatggtgaacct 722
|||||| |||||||| ||||| ||||||||
Sbjct: 703 gaagtaagagtggccattgattgtgaacct 732
>gb|DT483724.1|DT483724 WS02523.B21_G13 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02523_G13 3', mRNA sequence
Length = 855
Score = 52.0 bits (26), Expect = 5e-005
Identities = 119/150 (79%)
Strand = Plus / Plus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
|||||||||||| || || |||||||| | ||||| || ||||| || || ||||| ||
Sbjct: 227 gttgctctgccaattttgcccccagttccttgacattggttgccaaccagtcctggaccc 286
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
|||||||||||| || || || || || || || | ||||| || | ||| || || ||
Sbjct: 287 cttgatggacacagaatgtacatcaccagcaccaccaacgttagtgatcaggactagatt 346
Query: 693 gaagtaggagtggccgttgatggtgaacct 722
|||||| |||||||| ||||| ||||||||
Sbjct: 347 gaagtaagagtggccattgattgtgaacct 376
>gb|DT485712.1|DT485712 WS02528.B21_P11 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02528_P11 3', mRNA sequence
Length = 828
Score = 52.0 bits (26), Expect = 5e-005
Identities = 119/150 (79%)
Strand = Plus / Plus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
|||||||||||| || || |||||||| | ||||| || ||||| || || ||||| ||
Sbjct: 618 gttgctctgccaattttgcccccagttccttgacattggttgccaaccagtcctggaccc 677
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
|||||||||||| || || || || || || || | ||||| || | ||| || || ||
Sbjct: 678 cttgatggacacagaatgtacatcaccagcaccaccaacgttagtgatcaggactagatt 737
Query: 693 gaagtaggagtggccgttgatggtgaacct 722
|||||| |||||||| ||||| ||||||||
Sbjct: 738 gaagtaagagtggccattgattgtgaacct 767
>gb|DT490252.1|DT490252 WS02544.B21_H07 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02544_H07 3', mRNA sequence
Length = 702
Score = 52.0 bits (26), Expect = 5e-005
Identities = 119/150 (79%)
Strand = Plus / Plus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
|||||||||||| || || |||||||| | ||||| || ||||| || || ||||| ||
Sbjct: 241 gttgctctgccaattttgcccccagttccttgacattggttgccaaccagtcctggaccc 300
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
|||||||||||| || || || || || || || | ||||| || | ||| || || ||
Sbjct: 301 cttgatggacacagaatgtacatcaccagcaccaccaacgttagtgatcaggactagatt 360
Query: 693 gaagtaggagtggccgttgatggtgaacct 722
|||||| |||||||| ||||| ||||||||
Sbjct: 361 gaagtaagagtggccattgattgtgaacct 390
>gb|DT510215.1|DT510215 WS02425.BR_O13 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_O13 5', mRNA sequence
Length = 776
Score = 52.0 bits (26), Expect = 5e-005
Identities = 119/150 (79%)
Strand = Plus / Minus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
|||||||||||| || || |||||||| | ||||| || ||||| || || ||||| ||
Sbjct: 637 gttgctctgccaattttgcccccagttccttgacattggttgccaaccagtcctggaccc 578
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
|||||||||||| || || || || || || || | ||||| || | ||| || || ||
Sbjct: 577 cttgatggacacagaatgtacatcaccagcaccaccaacgttagtgatcaggactagatt 518
Query: 693 gaagtaggagtggccgttgatggtgaacct 722
|||||| |||||||| ||||| ||||||||
Sbjct: 517 gaagtaagagtggccattgattgtgaacct 488
>gb|DT514833.1|DT514833 WS02425.B21_O13 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_O13 3', mRNA sequence
Length = 864
Score = 52.0 bits (26), Expect = 5e-005
Identities = 119/150 (79%)
Strand = Plus / Plus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
|||||||||||| || || |||||||| | ||||| || ||||| || || ||||| ||
Sbjct: 697 gttgctctgccaattttgcccccagttccttgacattggttgccaaccagtcctggaccc 756
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
|||||||||||| || || || || || || || | ||||| || | ||| || || ||
Sbjct: 757 cttgatggacacagaatgtacatcaccagcaccaccaacgttagtgatcaggactagatt 816
Query: 693 gaagtaggagtggccgttgatggtgaacct 722
|||||| |||||||| ||||| ||||||||
Sbjct: 817 gaagtaagagtggccattgattgtgaacct 846
>gb|DT519500.1|DT519500 WS02441.B21_M17 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02441_M17 3', mRNA sequence
Length = 863
Score = 52.0 bits (26), Expect = 5e-005
Identities = 119/150 (79%)
Strand = Plus / Plus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
|||||||||||| || || |||||||| | ||||| || ||||| || || ||||| ||
Sbjct: 696 gttgctctgccaattttgcccccagttccttgacattggttgccaaccagtcctggaccc 755
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
|||||||||||| || || || || || || || | ||||| || | ||| || || ||
Sbjct: 756 cttgatggacacagaatgtacatcaccagcaccaccaacgttagtgatcaggactagatt 815
Query: 693 gaagtaggagtggccgttgatggtgaacct 722
|||||| |||||||| ||||| ||||||||
Sbjct: 816 gaagtaagagtggccattgattgtgaacct 845
>gb|DV464731.1|DV464731 MTUNUL1.P30.B05 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 825
Score = 52.0 bits (26), Expect = 5e-005
Identities = 119/150 (79%)
Strand = Plus / Minus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
|||||||||||| || || |||||||| | ||||| || ||||| || || ||||| ||
Sbjct: 710 gttgctctgccaattttgcccccagttccttgacattggttgccaaccagtcctggaccc 651
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
|||||||||||| || || || || || || || | ||||| || | ||| || || ||
Sbjct: 650 cttgatggacacagaatgtacatcaccagcaccaccaacgttagtgatcaggactagatt 591
Query: 693 gaagtaggagtggccgttgatggtgaacct 722
|||||| |||||||| ||||| ||||||||
Sbjct: 590 gaagtaagagtggccattgattgtgaacct 561
>gb|AY435101.1| Populus tremula x Populus tremuloides alpha-expansin 3 (Exp3) mRNA,
complete cds
Length = 1351
Score = 52.0 bits (26), Expect = 5e-005
Identities = 119/150 (79%)
Strand = Plus / Minus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
|||||||||||| || || |||||||| | ||||| || ||||| || || ||||| ||
Sbjct: 669 gttgctctgccaattttgcccccagttccttgacattggttgccaaccagtcctggaccc 610
Query: 633 cttgatggacacggactgcacgtccccggcgccggccacgttggtcaccagcaccaggtt 692
|||||| ||||| || || || || || || ||| | ||||| || | ||| || || ||
Sbjct: 609 cttgatcgacacagaatgtacatcaccagcaccgccaacgttagtgatcaggactagatt 550
Query: 693 gaagtaggagtggccgttgatggtgaacct 722
|||||||||||| ||||||| ||||||||
Sbjct: 549 gaagtaggagtgaccgttgactgtgaacct 520
>gb|BI071873.1|BI071873 C065P28U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 328
Score = 48.1 bits (24), Expect = 8e-004
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccacccggtgctggagcc 632
|||||||||||| || || |||||||| | ||||| |||||||| || || ||||| ||
Sbjct: 74 gttgctctgccaattttgcccccagttccttgacattggctgccaaccagtcctggaccc 15
Query: 633 cttgatggacac 644
|||||| |||||
Sbjct: 14 cttgatcgacac 3
>gb|BU827896.1|BU827896 K011P11P Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 571
Score = 48.1 bits (24), Expect = 8e-004
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 668 ccacgttggtcaccagcaccaggttgaagtaggagtggccgttgatggtgaa 719
|||||||||| | ||| || || |||||||||||||| |||||||| |||||
Sbjct: 538 ccacgttggttatcaggactagattgaagtaggagtgaccgttgattgtgaa 487
>gb|BU867573.1|BU867573 M101G12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 673
Score = 48.1 bits (24), Expect = 8e-004
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 667 gccacgttggtcaccagcaccaggttgaagta 698
|||||||||||||||| ||||||||||||||
Sbjct: 573 gccacgttggtcaccaaaaccaggttgaagta 542
>gb|BU868621.1|BU868621 M118B09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 746
Score = 48.1 bits (24), Expect = 8e-004
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 667 gccacgttggtcaccagcaccaggttgaagta 698
|||||||||||||||| ||||||||||||||
Sbjct: 255 gccacgttggtcaccaaaaccaggttgaagta 224
>gb|CA931232.1|CA931232 MTU2TA.P4.D07 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 471
Score = 48.1 bits (24), Expect = 8e-004
Identities = 43/48 (89%), Gaps = 1/48 (2%)
Strand = Plus / Plus
Query: 573 gttgctctgccagttctggccccagttgcgggacatgggctgccaccc 620
||||||||||||||| ||||||||||| | ||||| |||||||||||
Sbjct: 348 gttgctctgccagttttggccccagtttcttgacat-ggctgccaccc 394
>gb|CK109527.1|CK109527 N017H10 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA clone N017H10 5', mRNA sequence
Length = 423
Score = 48.1 bits (24), Expect = 8e-004
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 667 gccacgttggtcaccagcaccaggttgaagta 698
|||||||||||||||| ||||||||||||||
Sbjct: 168 gccacgttggtcaccaaaaccaggttgaagta 137
>gb|CN519990.1|CN519990 GQ0108.B3_K15 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_K15 5', mRNA sequence
Length = 777
Score = 48.1 bits (24), Expect = 8e-004
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 667 gccacgttggtcaccagcaccaggttgaagta 698
|||||||||||||||| ||||||||||||||
Sbjct: 591 gccacgttggtcaccaaaaccaggttgaagta 622
>gb|CN520597.1|CN520597 GQ0105.B3_E19 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0105_E19 5', mRNA sequence
Length = 670
Score = 48.1 bits (24), Expect = 8e-004
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 667 gccacgttggtcaccagcaccaggttgaagta 698
|||||||||||||||| ||||||||||||||
Sbjct: 571 gccacgttggtcaccaaaaccaggttgaagta 540
>gb|CN523732.1|CN523732 GQ015M10.T3_E03 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M10_E03 5', mRNA sequence
Length = 737
Score = 48.1 bits (24), Expect = 8e-004
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 667 gccacgttggtcaccagcaccaggttgaagta 698
|||||||||||||||| ||||||||||||||
Sbjct: 304 gccacgttggtcaccaaaaccaggttgaagta 273
>gb|CV240405.1|CV240405 WS0251.B21_E17 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0251_E17 3', mRNA sequence
Length = 885
Score = 48.1 bits (24), Expect = 8e-004
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 667 gccacgttggtcaccagcaccaggttgaagta 698
|||||||||||||||| ||||||||||||||
Sbjct: 623 gccacgttggtcaccaaaaccaggttgaagta 654
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 112,224
Number of Sequences: 369679
Number of extensions: 112224
Number of successful extensions: 31223
Number of sequences better than 0.5: 107
Number of HSP's better than 0.5 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 30986
Number of HSP's gapped (non-prelim): 226
length of query: 1271
length of database: 203,408,664
effective HSP length: 19
effective length of query: 1252
effective length of database: 196,384,763
effective search space: 245873723276
effective search space used: 245873723276
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)