BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.680
(461 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU833914.1|BU833914 T054C04 Populus apical shoot cDNA li... 109 9e-023
gb|BU880752.1|BU880752 UM54TD04 Populus flower cDNA library... 109 9e-023
gb|CF119917.1|CF119917 MTU10CS.P8.A02 Aspen stem cDNA Libra... 109 9e-023
gb|CK099853.1|CK099853 A086P72.5pR Hybrid aspen plasmid lib... 109 9e-023
gb|AJ775547.1|AJ775547 AJ775547 Populus euphratica shoot 3-... 109 9e-023
gb|CV244182.1|CV244182 WS0253.B21_P12 PT-MB-N-A-15 Populus ... 109 9e-023
gb|CV247338.1|CV247338 WS01117.B21_N09 PT-P-FL-A-2 Populus ... 109 9e-023
gb|CV258128.1|CV258128 WS0248.B21_J22 PTxD-ICC-N-A-14 Popul... 109 9e-023
gb|CV270948.1|CV270948 WS0153.B21_G02 PTxN-IB-A-6 Populus t... 109 9e-023
gb|BP931326.1|BP931326 BP931326 full-length enriched poplar... 109 9e-023
gb|BP931372.1|BP931372 BP931372 full-length enriched poplar... 109 9e-023
gb|BP931426.1|BP931426 BP931426 full-length enriched poplar... 109 9e-023
gb|BP935316.1|BP935316 BP935316 full-length enriched poplar... 109 9e-023
gb|DT484214.1|DT484214 WS02524.B21_M09 PT-MB-N-A-15 Populus... 109 9e-023
gb|DT511279.1|DT511279 WS02416.B21_A15 PTxD-ICC-N-A-14 Popu... 109 9e-023
gb|DT521711.1|DT521711 WS02035.B21_A09 PTxN-IB-N-A-11 Popul... 109 9e-023
gb|BP937045.1|BP937045 BP937045 full-length enriched poplar... 105 1e-021
gb|AI165598.1|AI165598 A086p73u Hybrid aspen plasmid librar... 103 6e-021
gb|BU831922.1|BU831922 T027D03 Populus apical shoot cDNA li... 101 2e-020
gb|BU881635.1|BU881635 UM65TE04 Populus flower cDNA library... 101 2e-020
gb|CB240352.1|CB240352 PopSC00331 Poplar SC cDNA library Po... 101 2e-020
gb|CA823842.1|CA823842 R32C01 two-month-old roots from clon... 101 2e-020
gb|CF236379.1|CF236379 PtaJXT2B12B1204 Poplar cDNA library ... 101 2e-020
gb|AJ774769.1|AJ774769 AJ774769 Populus euphratica shoot 3-... 101 2e-020
gb|CV256042.1|CV256042 WS0242.B21_M08 PTxD-ICC-N-A-14 Popul... 101 2e-020
gb|CV256662.1|CV256662 WS0244.B21_H13 PTxD-ICC-N-A-14 Popul... 101 2e-020
gb|CV256888.1|CV256888 WS0245.B21_B05 PTxD-ICC-N-A-14 Popul... 101 2e-020
gb|CV263372.1|CV263372 WS02021.B21_D23 PTxN-IB-N-A-11 Popul... 101 2e-020
gb|CV265867.1|CV265867 WS02028.B21_H15 PTxN-IB-N-A-11 Popul... 101 2e-020
gb|CV267025.1|CV267025 WS02030.B21_J23 PTxN-IB-N-A-11 Popul... 101 2e-020
gb|CV283179.1|CV283179 WS0186.B21_K06 PTxD-IL-N-A-9 Populus... 101 2e-020
gb|CV283590.1|CV283590 WS0187.B21_M01 PTxD-IL-N-A-9 Populus... 101 2e-020
gb|CX654045.1|CX654045 PO02012C01 Poplar SC cDNA library Po... 101 2e-020
gb|CX658816.1|CX658816 PO01022F09 Poplar SC cDNA library Po... 101 2e-020
gb|BP929800.1|BP929800 BP929800 full-length enriched poplar... 101 2e-020
gb|BP931693.1|BP931693 BP931693 full-length enriched poplar... 101 2e-020
gb|BP931871.1|BP931871 BP931871 full-length enriched poplar... 101 2e-020
gb|BP933637.1|BP933637 BP933637 full-length enriched poplar... 101 2e-020
gb|BP934326.1|BP934326 BP934326 full-length enriched poplar... 101 2e-020
gb|BP934923.1|BP934923 BP934923 full-length enriched poplar... 101 2e-020
gb|BP935054.1|BP935054 BP935054 full-length enriched poplar... 101 2e-020
gb|BP935601.1|BP935601 BP935601 full-length enriched poplar... 101 2e-020
gb|DT481613.1|DT481613 WS02532.BR_G09 PT-MB-N-A-15 Populus ... 101 2e-020
gb|DT504598.1|DT504598 WS01314.B21_A08 PTxD-IL-FL-A-4 Popul... 101 2e-020
gb|DT524571.1|DT524571 WS02043.C21_A09 PTxN-IB-N-A-11 Popul... 101 2e-020
gb|DV466676.1|DV466676 MTUNUL1.P8.G11 NUL Populus fremontii... 101 2e-020
gb|BP934757.1|BP934757 BP934757 full-length enriched poplar... 100 9e-020
gb|BP932431.1|BP932431 BP932431 full-length enriched poplar... 96 1e-018
gb|CN520562.1|CN520562 GQ0105.B3_E02 GQ010 Populus trichoca... 94 6e-018
gb|CV130504.1|CV130504 X9P07a03 Populus stem seasonal libra... 94 6e-018
gb|CV247377.1|CV247377 WS01117.B21_P13 PT-P-FL-A-2 Populus ... 94 6e-018
gb|CV272080.1|CV272080 WS0156.B21.1_J12 PTxN-IB-A-6 Populus... 94 6e-018
gb|CV279573.1|CV279573 WS0132.B21_F16 PTxD-IL-FL-A-4 Populu... 94 6e-018
gb|BP934988.1|BP934988 BP934988 full-length enriched poplar... 94 6e-018
gb|BP936728.1|BP936728 BP936728 full-length enriched poplar... 94 6e-018
gb|DT486957.1|DT486957 WS02532.B21_G09 PT-MB-N-A-15 Populus... 94 6e-018
gb|DT511834.1|DT511834 WS02417.B21_J05 PTxD-ICC-N-A-14 Popu... 94 6e-018
gb|DT513010.1|DT513010 WS02420.B21_N24 PTxD-ICC-N-A-14 Popu... 94 6e-018
gb|CA931892.1|CA931892 MTU4TA.P24.C03 Aspen apex cDNA Libra... 92 2e-017
gb|CA932139.1|CA932139 MTU4TA.P27.D07 Aspen apex cDNA Libra... 92 2e-017
gb|DT469900.1|DT469900 WS01919.C21_E03 PT-DX-N-A-10 Populus... 90 9e-017
gb|BP930149.1|BP930149 BP930149 full-length enriched poplar... 88 3e-016
gb|BP934684.1|BP934684 BP934684 full-length enriched poplar... 88 3e-016
gb|BU894231.1|BU894231 X004G11 Populus wood cDNA library Po... 86 1e-015
gb|DN484869.1|DN484869 K030P34.3pR Populus apical shoot cDN... 86 1e-015
gb|DT519013.1|DT519013 WS02439.B21_P23 PTxD-ICC-N-A-14 Popu... 86 1e-015
gb|CA929947.1|CA929947 MTU2CA.P4.H07 Aspen apex cDNA Librar... 84 5e-015
gb|CA930281.1|CA930281 MTU2CA.P9.E12 Aspen apex cDNA Librar... 84 5e-015
gb|CA930420.1|CA930420 MTU4CA.P22.D08 Aspen apex cDNA Libra... 84 5e-015
gb|CA933197.1|CA933197 MTU5CS.P4.G08 Aspen stem cDNA Librar... 84 5e-015
gb|CA933417.1|CA933417 MTU5CS.P7.G07 Aspen stem cDNA Librar... 84 5e-015
gb|BU827876.1|BU827876 K010P61P Populus apical shoot cDNA l... 82 2e-014
gb|CF232699.1|CF232699 PtaJXO0014G10G1014 Poplar cDNA libra... 82 2e-014
gb|CA929388.1|CA929388 MTU2CA.P13.A11 Aspen apex cDNA Libra... 80 8e-014
gb|CV250001.1|CV250001 WS01126.B21_A03 PT-P-FL-A-2 Populus ... 80 8e-014
gb|BP932551.1|BP932551 BP932551 full-length enriched poplar... 80 8e-014
gb|BP936896.1|BP936896 BP936896 full-length enriched poplar... 80 8e-014
gb|CA931858.1|CA931858 MTU4TA.P23.G10 Aspen apex cDNA Libra... 78 3e-013
gb|AI164448.1|AI164448 A061P72U Hybrid aspen plasmid librar... 76 1e-012
gb|BU821678.1|BU821678 UB26CPD08 Populus tremula cambium cD... 76 1e-012
gb|CA931572.1|CA931572 MTU2TA.P9.B10 Aspen apex cDNA Librar... 76 1e-012
gb|CA931616.1|CA931616 MTU2TA.P9.G05 Aspen apex cDNA Librar... 76 1e-012
gb|CN523136.1|CN523136 GQ015M01.B3_B13 GQ015 Populus tricho... 76 1e-012
gb|CA929182.1|CA929182 MTU2CA.P10.A12 Aspen apex cDNA Libra... 72 2e-011
gb|CA929267.1|CA929267 MTU2CA.P11.C07 Aspen apex cDNA Libra... 72 2e-011
gb|CA929834.1|CA929834 MTU2CA.P3.D04 Aspen apex cDNA Librar... 72 2e-011
gb|BP934978.1|BP934978 BP934978 full-length enriched poplar... 72 2e-011
gb|CK320781.1|CK320781 X9SP03g02 Populus stem seasonal libr... 70 8e-011
gb|CA926758.1|CA926758 MTU6CR.P18.G12 Aspen root cDNA Libra... 68 3e-010
gb|CX656922.1|CX656922 PO02028D04 Poplar SC cDNA library Po... 68 3e-010
gb|CA822617.1|CA822617 R10G08 two-month-old roots from clon... 66 1e-009
gb|BP933951.1|BP933951 BP933951 full-length enriched poplar... 66 1e-009
gb|BP936579.1|BP936579 BP936579 full-length enriched poplar... 64 5e-009
gb|BU820580.1|BU820580 UB11CPG03 Populus tremula cambium cD... 60 8e-008
gb|CA931542.1|CA931542 MTU2TA.P8.G06 Aspen apex cDNA Librar... 60 8e-008
gb|CV131274.1|CV131274 L2P01g05 Populus stem seasonal libra... 54 5e-006
gb|DT510270.1|DT510270 WS02426.BR_B03 PTxD-ICC-N-A-14 Popul... 52 2e-005
gb|DT514893.1|DT514893 WS02426.B21_B03 PTxD-ICC-N-A-14 Popu... 52 2e-005
gb|CK319956.1|CK319956 L1P09b09 Populus stem seasonal libra... 50 7e-005
gb|CF119260.1|CF119260 MTU10CS.P15.E09 Aspen stem cDNA Libr... 44 0.005
gb|CA933471.1|CA933471 MTU5CS.P8.E06 Aspen stem cDNA Librar... 42 0.018
gb|CF118925.1|CF118925 MTU10CS.P11.C02 Aspen stem cDNA Libr... 42 0.018
gb|CF227835.1|CF227835 PtaXM0005C2C0206 Poplar cDNA library... 42 0.018
gb|BU865816.1|BU865816 S059B02 Populus imbibed seed cDNA li... 40 0.072
gb|AJ534481.1|AJ534481 AJ534481 Populus euphratica root and... 40 0.072
gb|CA927828.1|CA927828 MTU6TR.P13.D10 Aspen root cDNA Libra... 40 0.072
gb|CA928259.1|CA928259 MTU6TR.P18.E08 Aspen root cDNA Libra... 40 0.072
gb|CA928284.1|CA928284 MTU6TR.P18.G11 Aspen root cDNA Libra... 40 0.072
gb|CA928421.1|CA928421 MTU6TR.P2.E01 Aspen root cDNA Librar... 40 0.072
gb|CA933136.1|CA933136 MTU5CS.P3.H12 Aspen stem cDNA Librar... 40 0.072
gb|CA933158.1|CA933158 MTU5CS.P4.C02 Aspen stem cDNA Librar... 40 0.072
gb|CA933187.1|CA933187 MTU5CS.P4.F02 Aspen stem cDNA Librar... 40 0.072
gb|CA933563.1|CA933563 MTU5CS.P9.F03 Aspen stem cDNA Librar... 40 0.072
gb|CF119330.1|CF119330 MTU10CS.P16.D12 Aspen stem cDNA Libr... 40 0.072
gb|CF120036.1|CF120036 MTU10CS.P9.E01 Aspen stem cDNA Libra... 40 0.072
gb|DV464375.1|DV464375 MTUNUL1.P26.F08 NUL Populus fremonti... 40 0.072
gb|CA924833.1|CA924833 MTU7TL.P10.B12 Aspen leaf cDNA Libra... 38 0.28
gb|CA925020.1|CA925020 MTU7TL.P12.F05 Aspen leaf cDNA Libra... 38 0.28
gb|AJ771076.1|AJ771076 AJ771076 Populus euphratica leaf 3-6... 38 0.28
gb|AJ771544.1|AJ771544 AJ771544 Populus euphratica root 3-6... 38 0.28
gb|AJ771819.1|AJ771819 AJ771819 Populus euphratica root 3-6... 38 0.28
gb|AJ772174.1|AJ772174 AJ772174 Populus euphratica shoot in... 38 0.28
gb|AJ770035.1|AJ770035 AJ770035 Populus euphratica leaf 3-6... 38 0.28
gb|AF139835.1|AF139835 Populus tremula x Populus tremuloide... 38 0.28
>gb|BU833914.1|BU833914 T054C04 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 562
Score = 109 bits (55), Expect = 9e-023
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 293 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 234
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
||||||||||| | |||||| ||||||||| | ||||||||||| ||||| ||
Sbjct: 233 ataccatcagaagccattgtcttcttgtagacatcaatgagcccattgaattgcctctct 174
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 173 cctcccttctttgcagccttggcatcattggccaa 139
>gb|BU880752.1|BU880752 UM54TD04 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 573
Score = 109 bits (55), Expect = 9e-023
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 377 agaccacgatagacaatgattccaacacaggaaatgttaaatccacggtaaagcccggca 318
Query: 320 ataccatcaga 330
| |||||||||
Sbjct: 317 agaccatcaga 307
>gb|CF119917.1|CF119917 MTU10CS.P8.A02 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 582
Score = 109 bits (55), Expect = 9e-023
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 13 agacctcgatagacaatgattccaacacaggaaatgttaaatccacggtaaagcccagca 72
Query: 320 ataccatcaga 330
| |||||||||
Sbjct: 73 agaccatcaga 83
>gb|CK099853.1|CK099853 A086P72.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A086P72 5', mRNA sequence
Length = 431
Score = 109 bits (55), Expect = 9e-023
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 316 agaccacgatagacaatgattccaacacaggaaatgttaaatccacggtaaagcccggca 257
Query: 320 ataccatcaga 330
| |||||||||
Sbjct: 256 agaccatcaga 246
>gb|AJ775547.1|AJ775547 AJ775547 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300033G10F1, mRNA sequence
Length = 665
Score = 109 bits (55), Expect = 9e-023
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 198 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 139
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
||||||||||| | |||||| ||||||||| | ||||||||||| ||||| ||
Sbjct: 138 ataccatcagaagccattgtcttcttgtagacatcaatgagcccattgaattgcctctct 79
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 78 cctcccttctttgcagccttggcatcattggccaa 44
>gb|CV244182.1|CV244182 WS0253.B21_P12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0253_P12 3', mRNA sequence
Length = 767
Score = 109 bits (55), Expect = 9e-023
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 658 agaccacgatagacaatgattccaacacaggaaatgttaaatccacggtaaagcccggca 717
Query: 320 ataccatcaga 330
| |||||||||
Sbjct: 718 agaccatcaga 728
>gb|CV247338.1|CV247338 WS01117.B21_N09 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01117_N09 3', mRNA sequence
Length = 902
Score = 109 bits (55), Expect = 9e-023
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 628 agaccacgatagacaatgattccaacacaggaaatgttaaatccacggtaaagcccggca 687
Query: 320 ataccatcaga 330
| |||||||||
Sbjct: 688 agaccatcaga 698
>gb|CV258128.1|CV258128 WS0248.B21_J22 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0248_J22 3', mRNA sequence
Length = 814
Score = 109 bits (55), Expect = 9e-023
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 711 agaccacgatagacaatgattccaacacaggaaatgttaaatccacggtaaagcccggca 770
Query: 320 ataccatcaga 330
| |||||||||
Sbjct: 771 agaccatcaga 781
>gb|CV270948.1|CV270948 WS0153.B21_G02 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0153_G02 3', mRNA sequence
Length = 903
Score = 109 bits (55), Expect = 9e-023
Identities = 130/155 (83%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 636 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 695
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
||||||||||| | |||||| ||||||||| | ||||||||||| ||||| ||
Sbjct: 696 ataccatcagaagccattgtcttcttgtagacatcaatgagcccattgaattgcctctcg 755
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 756 cctcccttctttgcagccttggcatcattggccaa 790
>gb|BP931326.1|BP931326 BP931326 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-022_A06.r 3', mRNA sequence
Length = 644
Score = 109 bits (55), Expect = 9e-023
Identities = 130/155 (83%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 469 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 528
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
||||||||||| | |||||| ||||||||| | ||||||||||| ||||| ||
Sbjct: 529 ataccatcagaagccattgtcttcttgtagacatcaatgagcccattgaattgcctctcg 588
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 589 cctcccttctttgcagccttggcatcattggccaa 623
>gb|BP931372.1|BP931372 BP931372 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-022_J12.r 3', mRNA sequence
Length = 648
Score = 109 bits (55), Expect = 9e-023
Identities = 130/155 (83%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 468 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 527
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
||||||||||| | |||||| ||||||||| | ||||||||||| ||||| ||
Sbjct: 528 ataccatcagaagccattgtcttcttgtagacatcaatgagcccattgaattgcctctcg 587
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 588 cctcccttctttgcagccttggcatcattggccaa 622
>gb|BP931426.1|BP931426 BP931426 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-023_E03.r 3', mRNA sequence
Length = 674
Score = 109 bits (55), Expect = 9e-023
Identities = 130/155 (83%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 468 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 527
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
||||||||||| | |||||| ||||||||| | ||||||||||| ||||| ||
Sbjct: 528 ataccatcagaagccattgtcttcttgtagacatcaatgagcccattgaattgcctctcg 587
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 588 cctcccttctttgcagccttggcatcattggccaa 622
>gb|BP935316.1|BP935316 BP935316 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-076_B08.r 3', mRNA sequence
Length = 641
Score = 109 bits (55), Expect = 9e-023
Identities = 130/155 (83%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 468 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 527
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
||||||||||| | |||||| ||||||||| | ||||||||||| ||||| ||
Sbjct: 528 ataccatcagaagccattgtcttcttgtagacatcaatgagcccattgaattgcctctcg 587
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 588 cctcccttctttgcagccttggcatcattggccaa 622
>gb|DT484214.1|DT484214 WS02524.B21_M09 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02524_M09 3', mRNA sequence
Length = 791
Score = 109 bits (55), Expect = 9e-023
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 515 agaccacgatagacaatgattccaacacaggaaatgttaaatccacggtaaagcccggca 574
Query: 320 ataccatcaga 330
| |||||||||
Sbjct: 575 agaccatcaga 585
>gb|DT511279.1|DT511279 WS02416.B21_A15 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02416_A15 3', mRNA sequence
Length = 918
Score = 109 bits (55), Expect = 9e-023
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 650 agaccacgatagacaatgattccaacacaggaaatgttaaatccacggtaaagcccggca 709
Query: 320 ataccatcaga 330
| |||||||||
Sbjct: 710 agaccatcaga 720
>gb|DT521711.1|DT521711 WS02035.B21_A09 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02035_A09 3', mRNA sequence
Length = 904
Score = 109 bits (55), Expect = 9e-023
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 701 agaccacgatagacaatgattccaacacaggaaatgttaaatccacggtaaagcccggca 642
Query: 320 ataccatcaga 330
| |||||||||
Sbjct: 641 agaccatcaga 631
>gb|BP937045.1|BP937045 BP937045 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-099_P17.r 3', mRNA sequence
Length = 641
Score = 105 bits (53), Expect = 1e-021
Identities = 125/149 (83%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 469 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 528
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
||||||||||| | |||||| ||||||||| | ||||||||||| ||||| ||
Sbjct: 529 ataccatcagaagccattgtcttcttgtagacatcaatgagcccattgaattgcctctcg 588
Query: 380 cctcctcccttggcagccttcgcatcatt 408
||||| ||| |||||||| ||||||||
Sbjct: 589 cctcccttctttgcagccttggcatcatt 617
>gb|AI165598.1|AI165598 A086p73u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 382
Score = 103 bits (52), Expect = 6e-021
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 263 ccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagcaata 322
|||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||| |
Sbjct: 269 ccacgatagacaatgattccaacacaggaaatgttaaatccacggtaaagcccggcaaga 210
Query: 323 ccatcaga 330
||||||||
Sbjct: 209 ccatcaga 202
>gb|BU831922.1|BU831922 T027D03 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 706
Score = 101 bits (51), Expect = 2e-020
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 635 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 576
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
||||||||||| | |||||| ||| ||||| | ||||||||||| ||||| ||
Sbjct: 575 ataccatcagaagccattgtcttcttgtacacatcaatgagcccattgaattgcctctct 516
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 515 cctcccttctttgcagccttggcatcattggccaa 481
>gb|BU881635.1|BU881635 UM65TE04 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 639
Score = 101 bits (51), Expect = 2e-020
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 500 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 441
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
| ||||||||| | |||||| ||||||||| | ||||||||||| ||||| ||
Sbjct: 440 acaccatcagaagccattgtcttcttgtagacatcaatgagcccattgaattgcctctct 381
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 380 cctcccttctttgcagccttggcatcattggccaa 346
>gb|CB240352.1|CB240352 PopSC00331 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PopSC00331, mRNA sequence
Length = 444
Score = 101 bits (51), Expect = 2e-020
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 249 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 190
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
||||||||||| | |||||| ||| ||||| | ||||||||||| ||||| ||
Sbjct: 189 ataccatcagaagccattgtcttcttgtacacatcaatgagcccattgaattgcctctct 130
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 129 cctcccttctttgcagccttggcatcattggccaa 95
>gb|CA823842.1|CA823842 R32C01 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 622
Score = 101 bits (51), Expect = 2e-020
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 399 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 340
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
| ||||||||| | |||||| ||||||||| | ||||||||||| ||||| ||
Sbjct: 339 acaccatcagaagccattgtcttcttgtagacatcaatgagcccattgaattgcctctct 280
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 279 cctcccttctttgcagccttggcatcattggccaa 245
>gb|CF236379.1|CF236379 PtaJXT2B12B1204 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 731
Score = 101 bits (51), Expect = 2e-020
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 99 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 40
Query: 320 ataccatcaga 330
|||||||||||
Sbjct: 39 ataccatcaga 29
>gb|AJ774769.1|AJ774769 AJ774769 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300024A11F1, mRNA sequence
Length = 615
Score = 101 bits (51), Expect = 2e-020
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
|||||||| || |||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 321 agaccacggtagacaatgattccaacacaggaaatgttaaatccacggtaaagcccggca 262
Query: 320 ataccatcaga 330
| |||||||||
Sbjct: 261 agaccatcaga 251
>gb|CV256042.1|CV256042 WS0242.B21_M08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0242_M08 3', mRNA sequence
Length = 859
Score = 101 bits (51), Expect = 2e-020
Identities = 129/155 (83%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 547 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 606
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
| ||||||||| | |||||| ||||||||| | ||||||||||| ||||| ||
Sbjct: 607 acaccatcagaagccattgtcttcttgtagacatcaatgagcccattgaattgcctctct 666
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 667 cctcccttctttgcagccttggcatcattggccaa 701
>gb|CV256662.1|CV256662 WS0244.B21_H13 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0244_H13 3', mRNA sequence
Length = 936
Score = 101 bits (51), Expect = 2e-020
Identities = 129/155 (83%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 519 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 578
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
| ||||||||| | |||||| ||||||||| | ||||||||||| ||||| ||
Sbjct: 579 acaccatcagaagccattgtcttcttgtagacatcaatgagcccattgaattgcctctct 638
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 639 cctcccttctttgcagccttggcatcattggccaa 673
>gb|CV256888.1|CV256888 WS0245.B21_B05 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0245_B05 3', mRNA sequence
Length = 807
Score = 101 bits (51), Expect = 2e-020
Identities = 129/155 (83%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 635 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 694
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
| ||||||||| | |||||| ||||||||| | ||||||||||| ||||| ||
Sbjct: 695 acaccatcagaagccattgtcttcttgtagacatcaatgagcccattgaattgcctctct 754
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 755 cctcccttctttgcagccttggcatcattggccaa 789
>gb|CV263372.1|CV263372 WS02021.B21_D23 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02021_D23 3', mRNA sequence
Length = 823
Score = 101 bits (51), Expect = 2e-020
Identities = 129/155 (83%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 547 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 606
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
| ||||||||| | |||||| ||||||||| | ||||||||||| ||||| ||
Sbjct: 607 acaccatcagaagccattgtcttcttgtagacatcaatgagcccattgaattgcctctct 666
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 667 cctcccttctttgcagccttggcatcattggccaa 701
>gb|CV265867.1|CV265867 WS02028.B21_H15 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02028_H15 3', mRNA sequence
Length = 810
Score = 101 bits (51), Expect = 2e-020
Identities = 129/155 (83%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 636 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 695
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
| ||||||||| | |||||| ||||||||| | ||||||||||| ||||| ||
Sbjct: 696 acaccatcagaagccattgtcttcttgtagacatcaatgagcccattgaattgcctctct 755
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 756 cctcccttctttgcagccttggcatcattggccaa 790
>gb|CV267025.1|CV267025 WS02030.B21_J23 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02030_J23 3', mRNA sequence
Length = 625
Score = 101 bits (51), Expect = 2e-020
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 538 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 597
Query: 320 ataccatcaga 330
|||||||||||
Sbjct: 598 ataccatcaga 608
>gb|CV283179.1|CV283179 WS0186.B21_K06 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0186_K06 3', mRNA sequence
Length = 806
Score = 101 bits (51), Expect = 2e-020
Identities = 129/155 (83%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 628 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 687
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
| ||||||||| | |||||| ||||||||| | ||||||||||| ||||| ||
Sbjct: 688 acaccatcagaagccattgtcttcttgtagacatcaatgagcccattgaattgcctctct 747
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 748 cctcccttctttgcagccttggcatcattggccaa 782
>gb|CV283590.1|CV283590 WS0187.B21_M01 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0187_M01 3', mRNA sequence
Length = 862
Score = 101 bits (51), Expect = 2e-020
Identities = 129/155 (83%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 589 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 648
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
| ||||||||| | |||||| ||||||||| | ||||||||||| ||||| ||
Sbjct: 649 acaccatcagaagccattgtcttcttgtagacatcaatgagcccattgaattgcctctct 708
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 709 cctcccttctttgcagccttggcatcattggccaa 743
>gb|CX654045.1|CX654045 PO02012C01 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02012C01 5', mRNA sequence
Length = 594
Score = 101 bits (51), Expect = 2e-020
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 333 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 274
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
||||||||||| | |||||| ||| ||||| | ||||||||||| ||||| ||
Sbjct: 273 ataccatcagaagccattgtcttcttgtacacatcaatgagcccattgaattgcctctct 214
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 213 cctcccttctttgcagccttggcatcattggccaa 179
>gb|CX658816.1|CX658816 PO01022F09 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01022F09 5', mRNA sequence
Length = 705
Score = 101 bits (51), Expect = 2e-020
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 331 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 272
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
||||||||||| | |||||| ||| ||||| | ||||||||||| ||||| ||
Sbjct: 271 ataccatcagaagccattgtcttcttgtacacatcaatgagcccattgaattgcctctct 212
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 211 cctcccttctttgcagccttggcatcattggccaa 177
>gb|BP929800.1|BP929800 BP929800 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-001_P15.r 3', mRNA sequence
Length = 563
Score = 101 bits (51), Expect = 2e-020
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 469 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 528
Query: 320 ataccatcaga 330
|||||||||||
Sbjct: 529 ataccatcaga 539
>gb|BP931693.1|BP931693 BP931693 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-026_F09.r 3', mRNA sequence
Length = 579
Score = 101 bits (51), Expect = 2e-020
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 459 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 518
Query: 320 ataccatcaga 330
|||||||||||
Sbjct: 519 ataccatcaga 529
>gb|BP931871.1|BP931871 BP931871 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-029_D02.r 3', mRNA sequence
Length = 603
Score = 101 bits (51), Expect = 2e-020
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||
Sbjct: 514 agaccacgatagacaatgatcccaacacaggaaatgttaaatccacggtaaagcccggca 573
Query: 320 ataccatcaga 330
| |||||||||
Sbjct: 574 agaccatcaga 584
>gb|BP933637.1|BP933637 BP933637 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-054_H01.r 3', mRNA sequence
Length = 602
Score = 101 bits (51), Expect = 2e-020
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 468 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 527
Query: 320 ataccatcaga 330
|||||||||||
Sbjct: 528 ataccatcaga 538
>gb|BP934326.1|BP934326 BP934326 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-063_H20.r 3', mRNA sequence
Length = 679
Score = 101 bits (51), Expect = 2e-020
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||
Sbjct: 506 agaccacgatagacaatgatcccaacacaggaaatgttaaatccacggtaaagcccggca 565
Query: 320 ataccatcaga 330
| |||||||||
Sbjct: 566 agaccatcaga 576
>gb|BP934923.1|BP934923 BP934923 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-071_A21.r 3', mRNA sequence
Length = 628
Score = 101 bits (51), Expect = 2e-020
Identities = 129/155 (83%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 465 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 524
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
||||||||||| | |||||| |||||| || | ||||||||||| ||||| ||
Sbjct: 525 ataccatcagaagccattgtcttcttgtagacctcaatgagcccattgaattgcctctcg 584
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 585 cctcccttctttgcagccttggcatcattggccaa 619
>gb|BP935054.1|BP935054 BP935054 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-072_P03.r 3', mRNA sequence
Length = 600
Score = 101 bits (51), Expect = 2e-020
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 467 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 526
Query: 320 ataccatcaga 330
|||||||||||
Sbjct: 527 ataccatcaga 537
>gb|BP935601.1|BP935601 BP935601 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-078_L05.r 3', mRNA sequence
Length = 558
Score = 101 bits (51), Expect = 2e-020
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 468 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 527
Query: 320 ataccatcaga 330
|||||||||||
Sbjct: 528 ataccatcaga 538
>gb|DT481613.1|DT481613 WS02532.BR_G09 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02532_G09 5', mRNA sequence
Length = 762
Score = 101 bits (51), Expect = 2e-020
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 381 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 322
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
| ||||||||| | |||||| ||||||||| | ||||||||||| ||||| ||
Sbjct: 321 acaccatcagaagccattgtcttcttgtagacatcaatgagcccattgaattgcctctct 262
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 261 cctcccttctttgcagccttggcatcattggccaa 227
>gb|DT504598.1|DT504598 WS01314.B21_A08 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01314_A08 3', mRNA sequence
Length = 960
Score = 101 bits (51), Expect = 2e-020
Identities = 129/155 (83%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 567 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 626
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
| ||||||||| | |||||| ||||||||| | ||||||||||| ||||| ||
Sbjct: 627 acaccatcagaagccattgtcttcttgtagacatcaatgagcccattgaattgcctctct 686
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 687 cctcccttctttgcagccttggcatcattggccaa 721
>gb|DT524571.1|DT524571 WS02043.C21_A09 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02043_A09 3', mRNA sequence
Length = 706
Score = 101 bits (51), Expect = 2e-020
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||
Sbjct: 616 agaccacgatagacaatgatcccaacacaggaaatgttaaatccacggtaaagcccggca 675
Query: 320 ataccatcaga 330
| |||||||||
Sbjct: 676 agaccatcaga 686
>gb|DV466676.1|DV466676 MTUNUL1.P8.G11 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 925
Score = 101 bits (51), Expect = 2e-020
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 601 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 542
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
| ||||||||| | |||||| ||||||||| | ||||||||||| ||||| ||
Sbjct: 541 acaccatcagaagccattgtcttcttgtagacatcaatgagcccattgaattgcctctct 482
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 481 cctcccttctttgcagccttggcatcattggccaa 447
>gb|BP934757.1|BP934757 BP934757 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-069_C01.r 3', mRNA sequence
Length = 649
Score = 99.6 bits (50), Expect = 9e-020
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 580 agaccgcgatagacaataattccaacacaagaaatgttaaatccacggtaaagcccagca 639
Query: 320 ataccatcag 329
||||||||||
Sbjct: 640 ataccatcag 649
>gb|BP932431.1|BP932431 BP932431 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-036_C11.r 3', mRNA sequence
Length = 678
Score = 95.6 bits (48), Expect = 1e-018
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggt-aaagcccagc 318
||||||||||| |||||||| ||||||||||| |||||||||||||||| ||||||||||
Sbjct: 582 agaccacgatagacaatgatcccaacacaggaaatgttaaatccacggtaaaagcccagc 641
Query: 319 aataccatcaga 330
|| |||||||||
Sbjct: 642 aagaccatcaga 653
>gb|CN520562.1|CN520562 GQ0105.B3_E02 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0105_E02 5', mRNA sequence
Length = 820
Score = 93.7 bits (47), Expect = 6e-018
Identities = 128/155 (82%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||| ||||| ||||| ||||||||||| || |||||||||||||| ||||||||||||
Sbjct: 472 agaccgcgatagacaataattccaacacaagaaatgttaaatccacgataaagcccagca 413
Query: 320 ataccatcagacttgagtgtcttgcggtagacatcgacaagcccattgaactgcctttca 379
| ||||||||| | |||||| ||||||||| | ||||||||||| ||||| ||
Sbjct: 412 acaccatcagaagccattgtcttcttgtagacatcaatgagcccattgaattgcctctct 353
Query: 380 cctcctcccttggcagccttcgcatcattagccaa 414
||||| ||| |||||||| |||||||| |||||
Sbjct: 352 cctcccttctttgcagccttggcatcattggccaa 318
>gb|CV130504.1|CV130504 X9P07a03 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 676
Score = 93.7 bits (47), Expect = 6e-018
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 260 agaccacgataaacaatgattccaacacaggagatgttaaatccacggtaaagcccagca 319
||||||||||| ||||||||||||||||||| |||| |||||||||||||||||| |||
Sbjct: 409 agaccacgatagccaatgattccaacacaggaaatgtcaaatccacggtaaagcccggca 350
Query: 320 ataccatcaga 330
| |||||||||
Sbjct: 349 agaccatcaga 339
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 44,528
Number of Sequences: 369679
Number of extensions: 44528
Number of successful extensions: 12330
Number of sequences better than 0.5: 124
Number of HSP's better than 0.5 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12131
Number of HSP's gapped (non-prelim): 193
length of query: 461
length of database: 203,408,664
effective HSP length: 19
effective length of query: 442
effective length of database: 196,384,763
effective search space: 86802065246
effective search space used: 86802065246
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)