BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.628
(1238 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU820238.1|BU820238 UA52DPG08 Populus tremula cambium cD... 143 2e-032
gb|BU834310.1|BU834310 T059E06 Populus apical shoot cDNA li... 143 2e-032
gb|CF236888.1|CF236888 PtaJXT8D6D0608 Poplar cDNA library f... 143 2e-032
gb|AJ775016.1|AJ775016 AJ775016 Populus euphratica shoot 3-... 143 2e-032
gb|CB184975.1|CB184975 PopSC00109 Poplar SC cDNA library Po... 137 1e-030
gb|CX172161.1|CX172161 F01_69-87_11.ab1 leaf inoculated wit... 137 1e-030
gb|CN519651.1|CN519651 GQ0101.B3_G06 GQ010 Populus trichoca... 129 3e-028
gb|BU869501.1|BU869501 M130G11 Populus flower cDNA library ... 127 1e-027
gb|BU881062.1|BU881062 UM58TC02 Populus flower cDNA library... 127 1e-027
gb|CF229231.1|CF229231 PtaXM0022H10H1016 Poplar cDNA librar... 127 1e-027
gb|DT472591.1|DT472591 WS01226.BR_K18 PT-GT-FL-A-3 Populus ... 127 1e-027
gb|CV235847.1|CV235847 WS01221.B21_N07 PT-GT-FL-A-3 Populus... 123 2e-026
gb|BP925893.1|BP925893 BP925893 full-length enriched poplar... 123 2e-026
gb|CN519629.1|CN519629 GQ0104.B3_J13 GQ010 Populus trichoca... 119 3e-025
gb|CV250619.1|CV250619 WS0114.B21_D04 PT-P-FL-A-2 Populus t... 119 3e-025
gb|CX169670.1|CX169670 C10_69-92_06.ab1 leaf inoculated wit... 119 3e-025
gb|DT470749.1|DT470749 WS01210.BR_K10 PT-GT-FL-A-3 Populus ... 119 3e-025
gb|DT475370.1|DT475370 WS0126.BR_O13 PT-GT-FL-A-3 Populus t... 119 3e-025
gb|DT498036.1|DT498036 WS0114.BR_D04 PT-P-FL-A-2 Populus tr... 119 3e-025
gb|DT501383.1|DT501383 WS01312.BR_J06 PTxD-IL-FL-A-4 Populu... 119 3e-025
gb|DT502170.1|DT502170 WS01315.BR_O05 PTxD-IL-FL-A-4 Populu... 119 3e-025
gb|DT504243.1|DT504243 WS01312.B21_J06 PTxD-IL-FL-A-4 Popul... 119 3e-025
gb|DT505062.1|DT505062 WS01315.B21_O05 PTxD-IL-FL-A-4 Popul... 119 3e-025
gb|DV463438.1|DV463438 MTUNUL1.P15.H09 NUL Populus fremonti... 119 3e-025
gb|DV463711.1|DV463711 MTUNUL1.P19.E04 NUL Populus fremonti... 119 3e-025
gb|DV465447.1|DV465447 MTUNUL1.P39.G01 NUL Populus fremonti... 119 3e-025
gb|CN519767.1|CN519767 GQ0108.B3_G18 GQ010 Populus trichoca... 117 1e-024
gb|CV244815.1|CV244815 WS0255.B21_L05 PT-MB-N-A-15 Populus ... 117 1e-024
gb|BP928712.1|BP928712 BP928712 full-length enriched poplar... 117 1e-024
gb|CV130949.1|CV130949 L1P02b06 Populus stem seasonal libra... 115 4e-024
gb|DV463383.1|DV463383 MTUNUL1.P15.C02 NUL Populus fremonti... 115 4e-024
gb|CB239849.1|CB239849 RSH17F03 two-month-old roots from cl... 111 6e-023
gb|DN500085.1|DN500085 UB17CPC02.5pR Populus active cambium... 111 6e-023
gb|BU817280.1|BU817280 UA15CPA06 Populus tremula cambium cD... 107 1e-021
gb|CV236042.1|CV236042 WS01222.B21_J20 PT-GT-FL-A-3 Populus... 100 2e-019
gb|DT508141.1|DT508141 WS02420.BR_C20 PTxD-ICC-N-A-14 Popul... 98 1e-018
gb|BP925843.1|BP925843 BP925843 full-length enriched poplar... 88 9e-016
gb|CN192550.1|CN192550 PtdH106 hybrid poplar systemically w... 86 4e-015
gb|BU818202.1|BU818202 UA27CPB05 Populus tremula cambium cD... 82 6e-014
gb|AJ775318.1|AJ775318 AJ775318 Populus euphratica shoot 3-... 74 1e-011
gb|DT471000.1|DT471000 WS01211.BR_M02 PT-GT-FL-A-3 Populus ... 74 1e-011
gb|CV271150.1|CV271150 WS0153.B21_O20 PTxN-IB-A-6 Populus t... 66 3e-009
gb|BI071400.1|BI071400 C057P16U Populus strain T89 leaves P... 60 2e-007
gb|CN523263.1|CN523263 GQ015M01.B3_F02 GQ015 Populus tricho... 60 2e-007
gb|BP925043.1|BP925043 BP925043 full-length enriched poplar... 56 3e-006
gb|BI069012.1|BI069012 C030P72U Populus strain T89 leaves P... 50 2e-004
gb|DT504615.1|DT504615 WS01314.B21_B09 PTxD-IL-FL-A-4 Popul... 48 8e-004
gb|CB833367.1|CB833367 R19D04 two-month-old roots from clon... 46 0.003
gb|CN193085.1|CN193085 PtdH477 hybrid poplar systemically w... 42 0.050
gb|DT501755.1|DT501755 WS01314.BR_B09 PTxD-IL-FL-A-4 Populu... 42 0.050
gb|BP925439.1|BP925439 BP925439 full-length enriched poplar... 40 0.20
>gb|BU820238.1|BU820238 UA52DPG08 Populus tremula cambium cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 516
Score = 143 bits (72), Expect = 2e-032
Identities = 214/262 (81%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||||||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 378 tgtatccacagatatctggtccaaacatgatactgtacggggtatcaccaccaaatttct 319
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||||||||| || || |||||||| ||||
Sbjct: 318 tctggtcaacttcaccactgagcaacttcatgtagccaccaccacaatcaagcttttgct 259
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | || || |||| ||||||||||||||| |||||| | |
Sbjct: 258 catgcttgacggagaattggaaaacaagtgtctgatccttgttgctgaattcagggaact 199
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| || || | || ||||||||||| || | |
Sbjct: 198 cagctgaaatagcatagaacctgtagtcttcacttgtttggatacctttgtcatcagggt 139
Query: 1081 ctccattccattttcccgaagt 1102
|||||||||||||||| |||||
Sbjct: 138 ctccattccattttccagaagt 117
>gb|BU834310.1|BU834310 T059E06 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 599
Score = 143 bits (72), Expect = 2e-032
Identities = 214/262 (81%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | ||||| |||||||||||||
Sbjct: 448 tgtatccacatatatctggtccaaacatgatactgtatggggtgtcaccaccaaatttct 389
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||||||||| || ||||||||||| ||||
Sbjct: 388 tctggtcaacttcaccactgagcaacttcatgtagccaccaccacagtcaagcttttgct 329
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | ||||| |||| ||||||||||||||| | |||| | |
Sbjct: 328 catgcttgacggagaattggaagaccagtgtctgatccttgttgctgaatttagggaact 269
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| ||||||||||| || || || | || ||||||||||| | || |
Sbjct: 268 cagctgaaatagcatagaacctatagtcttcacttgtttggatacctttgtcattggggt 209
Query: 1081 ctccattccattttcccgaagt 1102
|||||||||||||||| |||||
Sbjct: 208 ctccattccattttccagaagt 187
>gb|CF236888.1|CF236888 PtaJXT8D6D0608 Poplar cDNA library from young tension xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 143 bits (72), Expect = 2e-032
Identities = 214/262 (81%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | ||||| |||||||||||||
Sbjct: 348 tgtatccacatatatctggtccaaacatgatactgtatggggtgtcaccaccaaatttct 289
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||||||||| || ||||||||||| ||||
Sbjct: 288 tctggtcaacttcaccactgagcaacttcatgtagccaccaccacagtcaagcttttgct 229
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | ||||| |||| ||||||||||||||| | |||| | |
Sbjct: 228 catgcttgacggagaattggaagaccagtgtctgatccttgttgctgaatttagggaact 169
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| ||||||||||| || || || | || ||||||||||| | || |
Sbjct: 168 cagctgaaatagcatagaacctatagtcttcacttgtttggatacctttgtcattggggt 109
Query: 1081 ctccattccattttcccgaagt 1102
|||||||||||||||| |||||
Sbjct: 108 ctccattccattttccagaagt 87
>gb|AJ775016.1|AJ775016 AJ775016 Populus euphratica shoot 3-6 months Populus euphratica cDNA
clone P0000300026H05F1, mRNA sequence
Length = 563
Score = 143 bits (72), Expect = 2e-032
Identities = 214/262 (81%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||||||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 417 tgtatccacagatatctggtccaaacatgatactgtacggggtatcaccaccaaatttct 358
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||||||||| || || |||||||| ||||
Sbjct: 357 tctggtcaacttcaccactgagcaacttcaggtagccaccaccacaatcaagcttttgct 298
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | || || |||| ||||||||||||||| |||||| | |
Sbjct: 297 catgcttgacggagaattggaaaacaagtgtctgatccttgttgctgaattcagggaact 238
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| |||||||||||||| || || | || ||||||||||| | | ||
Sbjct: 237 cagctgaaatagcatagaacctgtagtcttcacttgtttggatacctttgtcattaggat 178
Query: 1081 ctccattccattttcccgaagt 1102
|||||||||||||||| |||||
Sbjct: 177 ctccattccattttccagaagt 156
>gb|CB184975.1|CB184975 PopSC00109 Poplar SC cDNA library Populus alba x Populus tremula var.
glandulosa cDNA clone PopSC00109, mRNA sequence
Length = 480
Score = 137 bits (69), Expect = 1e-030
Identities = 171/205 (83%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||||||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 242 tgtatccacagatatctggtccaaacatgatactgtacggggtatcaccaccaaatttct 183
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||||||||| || || |||||||| ||||
Sbjct: 182 tctggtcaacttcaccactgagcaacttcatgtagccaccaccacaatcaagcttttgct 123
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | || || |||| ||||||||||||||| |||||| | |
Sbjct: 122 catgcttgacggagaattggaaaacaagtgtctgatccttgttgctgaattcagggaact 63
Query: 1021 cggctgaaatggcatagaacctgta 1045
| |||||||| ||||||||||||||
Sbjct: 62 cagctgaaatagcatagaacctgta 38
>gb|CX172161.1|CX172161 F01_69-87_11.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 619
Score = 137 bits (69), Expect = 1e-030
Identities = 171/205 (83%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||||||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 414 tgtatccacagatatctggtccaaacatgatactgtacggggtatcaccaccaaatttct 355
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||||||||| || || |||||||| ||||
Sbjct: 354 tctggtcaacttcaccactgagcaacttcaggtagccaccaccacaatcaagcttttgct 295
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | || || |||| ||||||||||||||| |||||| | |
Sbjct: 294 catgcttgacggagaattggaaaacaagtgtctgatccttgttgctgaattcagggaact 235
Query: 1021 cggctgaaatggcatagaacctgta 1045
| |||||||| ||||||||||||||
Sbjct: 234 cagctgaaatagcatagaacctgta 210
>gb|CN519651.1|CN519651 GQ0101.B3_G06 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0101_G06 5', mRNA sequence
Length = 642
Score = 129 bits (65), Expect = 3e-028
Identities = 170/205 (82%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||||||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 411 tgtatccacagatatctggtccaaacatgatactgtacggggtatcaccaccaaatttct 352
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||||||||| || || |||||||| ||||
Sbjct: 351 tctggtcaacttcaccactgagcaacttcaggtagccaccaccacaatcaagcttttgct 292
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | || || |||| |||||||||||| || |||||| | |
Sbjct: 291 catgcttgacggagaattggaaaacaagtgtctgatccttgttgctaaattcagggaact 232
Query: 1021 cggctgaaatggcatagaacctgta 1045
| |||||||| ||||||||||||||
Sbjct: 231 cagctgaaatagcatagaacctgta 207
>gb|BU869501.1|BU869501 M130G11 Populus flower cDNA library Populus trichocarpa cDNA 5 prime,
mRNA sequence
Length = 664
Score = 127 bits (64), Expect = 1e-027
Identities = 212/262 (80%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 480 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 421
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||| ||||| || ||||||||||| ||||
Sbjct: 420 tctggtcaacttcaccactgagcaacttcatgtacccaccaccacagtcaagcttttgct 361
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| |||||||| || | || || |||| ||||||||||||||| | |||| | |
Sbjct: 360 catgcttgacagagaattggaagactagtgtctgatccttgttgctgaatttagggaact 301
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| ||||||||||| || || || | || ||||||||||| | || |
Sbjct: 300 cagctgaaatagcatagaacctatagtcttcacttgtttggatacctttgtcattggggt 241
Query: 1081 ctccattccattttcccgaagt 1102
|||||||||||||||| |||||
Sbjct: 240 ctccattccattttccagaagt 219
>gb|BU881062.1|BU881062 UM58TC02 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 648
Score = 127 bits (64), Expect = 1e-027
Identities = 212/262 (80%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 447 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 388
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||| ||||| || ||||||||||| ||||
Sbjct: 387 tctggtcaacttcaccactgagcaacttcatgtacccaccaccacagtcaagcttttgct 328
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| |||||||| || | || || |||| ||||||||||||||| | |||| | |
Sbjct: 327 catgcttgacagagaattggaagactagtgtctgatccttgttgctgaatttagggaact 268
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| ||||||||||| || || || | || ||||||||||| | || |
Sbjct: 267 cagctgaaatagcatagaacctatagtcttcacttgtttggatacctttgtcattggggt 208
Query: 1081 ctccattccattttcccgaagt 1102
|||||||||||||||| |||||
Sbjct: 207 ctccattccattttccagaagt 186
>gb|CF229231.1|CF229231 PtaXM0022H10H1016 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 584
Score = 127 bits (64), Expect = 1e-027
Identities = 167/202 (82%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| |||| |||||||||||| || ||||| | ||||| || ||||||||||
Sbjct: 441 tgtatccacatatatntggtccaaacatgatactgtatggggtgtcaccnccaaatttct 382
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||||||||| || ||||||||||| ||||
Sbjct: 381 tctggtcaacttcaccactgagcaacttcatgtagccaccaccacagtcaagcttttgct 322
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | ||||| |||| ||||||||||||||| | |||| | |
Sbjct: 321 catgcttgacggagaattggaagaccagtgtctgatccttgttgctgaatttagggaact 262
Query: 1021 cggctgaaatggcatagaacct 1042
| |||||||| |||||||||||
Sbjct: 261 cagctgaaatagcatagaacct 240
>gb|DT472591.1|DT472591 WS01226.BR_K18 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01226_K18 5', mRNA sequence
Length = 864
Score = 127 bits (64), Expect = 1e-027
Identities = 212/262 (80%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 451 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 392
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||| ||||| || ||||||||||| ||||
Sbjct: 391 tctggtcaacttcaccactgagcaacttcatgtacccaccaccacagtcaagcttttgct 332
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| |||||||| || | || || |||| ||||||||||||||| | |||| | |
Sbjct: 331 catgcttgacagagaattggaagactagtgtctgatccttgttgctgaatttagggaact 272
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| ||||||||||| || || || | || ||||||||||| | || |
Sbjct: 271 cagctgaaatagcatagaacctatagtcttcacttgtttggatacctttgtcattggggt 212
Query: 1081 ctccattccattttcccgaagt 1102
|||||||||||||||| |||||
Sbjct: 211 ctccattccattttccagaagt 190
>gb|CV235847.1|CV235847 WS01221.B21_N07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01221_N07 3', mRNA sequence
Length = 665
Score = 123 bits (62), Expect = 2e-026
Identities = 167/202 (82%)
Strand = Plus / Plus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 432 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 491
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||| ||||| || ||||||||||| ||||
Sbjct: 492 tctggtcaacttcaccactgagcaacttcatgtacccaccaccacagtcaagcttttgct 551
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| |||||||| || | || || |||| ||||||||||||||| | |||| | |
Sbjct: 552 catgcttgacagagaattggaagactagtgtctgatccttgttgctgaatttagggaact 611
Query: 1021 cggctgaaatggcatagaacct 1042
| |||||||| |||||||||||
Sbjct: 612 cagctgaaatagcatagaacct 633
>gb|BP925893.1|BP925893 BP925893 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-052_G09.f 5', mRNA sequence
Length = 577
Score = 123 bits (62), Expect = 2e-026
Identities = 167/202 (82%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 446 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 387
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||||||||| || ||||||||||| ||||
Sbjct: 386 tctggtcaacttcaccactgagcaacttcatgtagccaccaccacagtcaagcttttgct 327
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | || || |||| ||||||||||||||| | |||| | |
Sbjct: 326 catgcttgacggagaattggaagactagtgtctgatccttgttgctgaatttagggaact 267
Query: 1021 cggctgaaatggcatagaacct 1042
| |||||||| |||||||||||
Sbjct: 266 cagctgaaatagcatagaacct 245
>gb|CN519629.1|CN519629 GQ0104.B3_J13 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0104_J13 5', mRNA sequence
Length = 773
Score = 119 bits (60), Expect = 3e-025
Identities = 211/262 (80%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 421 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 362
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||| ||||| || ||||||||||| ||||
Sbjct: 361 tctggtcaacttcaccactgagcaacttcatgtacccaccaccacagtcaagcttttgct 302
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | || || |||| ||||||||||||||| | |||| | |
Sbjct: 301 catgcttgacggagaattggaagactagtgtctgatccttgttgctgaatttagggaact 242
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| ||||||||||| || || || | || ||||||||||| | || |
Sbjct: 241 cagctgaaatagcatagaacctatagtcttcacttgtttggatacctttgtcattggggt 182
Query: 1081 ctccattccattttcccgaagt 1102
|||||||||||||||| |||||
Sbjct: 181 ctccattccattttccagaagt 160
>gb|CV250619.1|CV250619 WS0114.B21_D04 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0114_D04
3', mRNA sequence
Length = 629
Score = 119 bits (60), Expect = 3e-025
Identities = 211/262 (80%)
Strand = Plus / Plus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 150 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 209
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||| ||||| || ||||||||||| ||||
Sbjct: 210 tctggtcaacttcaccactgagcaacttcatgtacccaccaccacagtcaagcttttgct 269
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | || || |||| ||||||||||||||| | |||| | |
Sbjct: 270 catgcttgacggagaattggaagactagtgtctgatccttgttgctgaatttagggaact 329
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| ||||||||||| || || || | || ||||||||||| | || |
Sbjct: 330 cagctgaaatagcatagaacctatagtcttcacttgtttggatacctttgtcattggggt 389
Query: 1081 ctccattccattttcccgaagt 1102
|||||||||||||||| |||||
Sbjct: 390 ctccattccattttccagaagt 411
>gb|CX169670.1|CX169670 C10_69-92_06.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 611
Score = 119 bits (60), Expect = 3e-025
Identities = 211/262 (80%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 420 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 361
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||| ||||| || ||||||||||| ||||
Sbjct: 360 tctggtcaacttcaccactgagcaacttcatgtacccaccaccacagtcaagcttttgct 301
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | || || |||| ||||||||||||||| | |||| | |
Sbjct: 300 catgcttgacggagaattggaagactagtgtctgatccttgttgctgaatttagggaact 241
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| ||||||||||| || || || | || ||||||||||| | || |
Sbjct: 240 cagctgaaatagcatagaacctatagtcttcacttgtttggatacctttgtcattggggt 181
Query: 1081 ctccattccattttcccgaagt 1102
|||||||||||||||| |||||
Sbjct: 180 ctccattccattttccagaagt 159
>gb|DT470749.1|DT470749 WS01210.BR_K10 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01210_K10 5', mRNA sequence
Length = 629
Score = 119 bits (60), Expect = 3e-025
Identities = 211/262 (80%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 440 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 381
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||| ||||| || ||||||||||| ||||
Sbjct: 380 tctggtcaacttcaccactgagcaacttcatgtacccaccaccacagtcaagcttttgct 321
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | || || |||| ||||||||||||||| | |||| | |
Sbjct: 320 catgcttgacggagaattggaagactagtgtctgatccttgttgctgaatttagggaact 261
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| ||||||||||| || || || | || ||||||||||| | || |
Sbjct: 260 cagctgaaatagcatagaacctatagtcttcacttgtttggatacctttgtcattggggt 201
Query: 1081 ctccattccattttcccgaagt 1102
|||||||||||||||| |||||
Sbjct: 200 ctccattccattttccagaagt 179
>gb|DT475370.1|DT475370 WS0126.BR_O13 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS0126_O13
5', mRNA sequence
Length = 591
Score = 119 bits (60), Expect = 3e-025
Identities = 211/262 (80%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 445 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 386
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||| ||||| || ||||||||||| ||||
Sbjct: 385 tctggtcaacttcaccactgagcaacttcatgtacccaccaccacagtcaagcttttgct 326
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | || || |||| ||||||||||||||| | |||| | |
Sbjct: 325 catgcttgacggagaattggaagactagtgtctgatccttgttgctgaatttagggaact 266
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| ||||||||||| || || || | || ||||||||||| | || |
Sbjct: 265 cagctgaaatagcatagaacctatagtcttcacttgtttggatacctttgtcattggggt 206
Query: 1081 ctccattccattttcccgaagt 1102
|||||||||||||||| |||||
Sbjct: 205 ctccattccattttccagaagt 184
>gb|DT498036.1|DT498036 WS0114.BR_D04 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0114_D04
5', mRNA sequence
Length = 587
Score = 119 bits (60), Expect = 3e-025
Identities = 211/262 (80%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 447 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 388
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||| ||||| || ||||||||||| ||||
Sbjct: 387 tctggtcaacttcaccactgagcaacttcatgtacccaccaccacagtcaagcttttgct 328
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | || || |||| ||||||||||||||| | |||| | |
Sbjct: 327 catgcttgacggagaattggaagactagtgtctgatccttgttgctgaatttagggaact 268
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| ||||||||||| || || || | || ||||||||||| | || |
Sbjct: 267 cagctgaaatagcatagaacctatagtcttcacttgtttggatacctttgtcattggggt 208
Query: 1081 ctccattccattttcccgaagt 1102
|||||||||||||||| |||||
Sbjct: 207 ctccattccattttccagaagt 186
>gb|DT501383.1|DT501383 WS01312.BR_J06 PTxD-IL-FL-A-4 Populus trichocarpa x Populus deltoides
cDNA clone WS01312_J06 5', mRNA sequence
Length = 663
Score = 119 bits (60), Expect = 3e-025
Identities = 211/262 (80%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 447 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 388
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||| ||||| || ||||||||||| ||||
Sbjct: 387 tctggtcaacttcaccactgagcaacttcatgtacccaccaccacagtcaagcttttgct 328
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | || || |||| ||||||||||||||| | |||| | |
Sbjct: 327 catgcttgacggagaattggaagactagtgtctgatccttgttgctgaatttagggaact 268
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| ||||||||||| || || || | || ||||||||||| | || |
Sbjct: 267 cagctgaaatagcatagaacctatagtcttcacttgtttggatacctttgtcattggggt 208
Query: 1081 ctccattccattttcccgaagt 1102
|||||||||||||||| |||||
Sbjct: 207 ctccattccattttccagaagt 186
>gb|DT502170.1|DT502170 WS01315.BR_O05 PTxD-IL-FL-A-4 Populus trichocarpa x Populus deltoides
cDNA clone WS01315_O05 5', mRNA sequence
Length = 876
Score = 119 bits (60), Expect = 3e-025
Identities = 211/262 (80%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 447 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 388
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||| ||||| || ||||||||||| ||||
Sbjct: 387 tctggtcaacttcaccactgagcaacttcatgtacccaccaccacagtcaagcttttgct 328
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | || || |||| ||||||||||||||| | |||| | |
Sbjct: 327 catgcttgacggagaattggaagactagtgtctgatccttgttgctgaatttagggaact 268
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| ||||||||||| || || || | || ||||||||||| | || |
Sbjct: 267 cagctgaaatagcatagaacctatagtcttcacttgtttggatacctttgtcattggggt 208
Query: 1081 ctccattccattttcccgaagt 1102
|||||||||||||||| |||||
Sbjct: 207 ctccattccattttccagaagt 186
>gb|DT504243.1|DT504243 WS01312.B21_J06 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01312_J06 3', mRNA sequence
Length = 855
Score = 119 bits (60), Expect = 3e-025
Identities = 211/262 (80%)
Strand = Plus / Plus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 432 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 491
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||| ||||| || ||||||||||| ||||
Sbjct: 492 tctggtcaacttcaccactgagcaacttcatgtacccaccaccacagtcaagcttttgct 551
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | || || |||| ||||||||||||||| | |||| | |
Sbjct: 552 catgcttgacggagaattggaagactagtgtctgatccttgttgctgaatttagggaact 611
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| ||||||||||| || || || | || ||||||||||| | || |
Sbjct: 612 cagctgaaatagcatagaacctatagtcttcacttgtttggatacctttgtcattggggt 671
Query: 1081 ctccattccattttcccgaagt 1102
|||||||||||||||| |||||
Sbjct: 672 ctccattccattttccagaagt 693
>gb|DT505062.1|DT505062 WS01315.B21_O05 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01315_O05 3', mRNA sequence
Length = 867
Score = 119 bits (60), Expect = 3e-025
Identities = 211/262 (80%)
Strand = Plus / Plus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 431 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 490
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||| ||||| || ||||||||||| ||||
Sbjct: 491 tctggtcaacttcaccactgagcaacttcatgtacccaccaccacagtcaagcttttgct 550
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | || || |||| ||||||||||||||| | |||| | |
Sbjct: 551 catgcttgacggagaattggaagactagtgtctgatccttgttgctgaatttagggaact 610
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| ||||||||||| || || || | || ||||||||||| | || |
Sbjct: 611 cagctgaaatagcatagaacctatagtcttcacttgtttggatacctttgtcattggggt 670
Query: 1081 ctccattccattttcccgaagt 1102
|||||||||||||||| |||||
Sbjct: 671 ctccattccattttccagaagt 692
>gb|DV463438.1|DV463438 MTUNUL1.P15.H09 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 693
Score = 119 bits (60), Expect = 3e-025
Identities = 211/262 (80%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 460 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 401
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||| ||||| || ||||||||||| ||||
Sbjct: 400 tctggtcaacttcaccactgagcaacttcatgtacccaccaccacagtcaagcttttgct 341
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | || || |||| ||||||||||||||| | |||| | |
Sbjct: 340 catgcttgacggagaattggaagactagtgtctgatccttgttgctgaatttagggaact 281
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| ||||||||||| || || || | || ||||||||||| | || |
Sbjct: 280 cagctgaaatagcatagaacctatagtcttcacttgtttggatacctttgtcattggggt 221
Query: 1081 ctccattccattttcccgaagt 1102
|||||||||||||||| |||||
Sbjct: 220 ctccattccattttccagaagt 199
>gb|DV463711.1|DV463711 MTUNUL1.P19.E04 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 643
Score = 119 bits (60), Expect = 3e-025
Identities = 211/262 (80%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 454 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 395
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||| ||||| || ||||||||||| ||||
Sbjct: 394 tctggtcaacttcaccactgagcaacttcatgtacccaccaccacagtcaagcttttgct 335
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | || || |||| ||||||||||||||| | |||| | |
Sbjct: 334 catgcttgacggagaattggaagactagtgtctgatccttgttgctgaatttagggaact 275
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| ||||||||||| || || || | || ||||||||||| | || |
Sbjct: 274 cagctgaaatagcatagaacctatagtcttcacttgtttggatacctttgtcattggggt 215
Query: 1081 ctccattccattttcccgaagt 1102
|||||||||||||||| |||||
Sbjct: 214 ctccattccattttccagaagt 193
>gb|DV465447.1|DV465447 MTUNUL1.P39.G01 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 874
Score = 119 bits (60), Expect = 3e-025
Identities = 211/262 (80%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 461 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 402
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||| ||||| || ||||||||||| ||||
Sbjct: 401 tctggtcaacttcaccactgagcaacttcatgtacccaccaccacagtcaagcttttgct 342
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | || || |||| ||||||||||||||| | |||| | |
Sbjct: 341 catgcttgacggagaattggaagactagtgtctgatccttgttgctgaatttagggaact 282
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| ||||||||||| || || || | || ||||||||||| | || |
Sbjct: 281 cagctgaaatagcatagaacctatagtcttcacttgtttggatacctttgtcattggggt 222
Query: 1081 ctccattccattttcccgaagt 1102
|||||||||||||||| |||||
Sbjct: 221 ctccattccattttccagaagt 200
>gb|CN519767.1|CN519767 GQ0108.B3_G18 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_G18 5', mRNA sequence
Length = 379
Score = 117 bits (59), Expect = 1e-024
Identities = 164/200 (82%)
Strand = Plus / Minus
Query: 846 ccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttctgg 905
||||||||| ||||||||||| || ||||| | || || ||||||||||||||||||
Sbjct: 362 ccacagatannnggtccaaacatgatactgtacggggtatcaccaccaaatttcttctgg 303
Query: 906 tctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgc 965
|| || ||||||| ||||| || | ||||||||| || || |||||||| ||||| |||
Sbjct: 302 tcaacttcaccactgagcaacttcaggtagccaccaccacaatcaagcttttgctcatgc 243
Query: 966 ttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcggct 1025
|| || ||||| || | || || |||| ||||||||||||||| |||||| | || |||
Sbjct: 242 ttgacggagaattggaaaacaagtgtctgatccttgttgctgaattcagggaactcagct 183
Query: 1026 gaaatggcatagaacctgta 1045
||||| ||||||||||||||
Sbjct: 182 gaaatagcatagaacctgta 163
>gb|CV244815.1|CV244815 WS0255.B21_L05 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS0255_L05
3', mRNA sequence
Length = 933
Score = 117 bits (59), Expect = 1e-024
Identities = 164/199 (82%)
Strand = Plus / Plus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 682 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 741
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||| ||||| || ||||||||||| ||||
Sbjct: 742 tctggtcaacttcaccactgagcaacttcatgtacccaccaccacagtcaagcttttgct 801
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| |||||||| || | || || |||| ||||||||||||||| | |||| | |
Sbjct: 802 catgcttgacagagaattggaagactagtgtctgatccttgttgctgaatttagggaact 861
Query: 1021 cggctgaaatggcatagaa 1039
| |||||||| ||||||||
Sbjct: 862 cagctgaaatagcatagaa 880
>gb|BP928712.1|BP928712 BP928712 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-087_I23.f 5', mRNA sequence
Length = 444
Score = 117 bits (59), Expect = 1e-024
Identities = 207/257 (80%)
Strand = Plus / Minus
Query: 846 ccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttctgg 905
||||| ||||||||||||||||| || ||||| | | || ||||||||||||||||||
Sbjct: 441 ccacatatatctggtccaaacatgatactgtatgggctatcaccaccaaatttcttctgg 382
Query: 906 tctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgc 965
|| || ||||||| ||||| || | ||||||||| || ||||||||||| ||||| |||
Sbjct: 381 tcaacttcaccactgagcaacttcatgtagccaccaccacagtcaagcttttgctcatgc 322
Query: 966 ttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcggct 1025
|| || ||||| || | || || |||| ||||||||||||||| | |||| | || |||
Sbjct: 321 ttgacggagaattggaagactagtgtctgatccttgttgctgaatttagggaactcagct 262
Query: 1026 gaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcatctcca 1085
||||| ||||||||||| || || || | || ||||||||||| | || ||||||
Sbjct: 261 gaaatagcatagaacctatagtcttcacttgtttggatacctttgtcattggggtctcca 202
Query: 1086 ttccattttcccgaagt 1102
||||||||||| |||||
Sbjct: 201 ttccattttccagaagt 185
>gb|CV130949.1|CV130949 L1P02b06 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 615
Score = 115 bits (58), Expect = 4e-024
Identities = 166/202 (82%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 325 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 266
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||| ||||| || ||||||||||| ||||
Sbjct: 265 tctggtcaacttcaccactgagcaacttcatgtacccaccaccacagtcaagcttttgct 206
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | || || |||| ||||||||||||||| | |||| | |
Sbjct: 205 catgcttgacggagaattggaagactagtgtctgatccttgttgctgaatttagggaact 146
Query: 1021 cggctgaaatggcatagaacct 1042
| |||||||| |||||||||||
Sbjct: 145 cagctgaaatagcatagaacct 124
>gb|DV463383.1|DV463383 MTUNUL1.P15.C02 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 853
Score = 115 bits (58), Expect = 4e-024
Identities = 166/202 (82%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 267 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 208
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||| ||||| || ||||||||||| ||||
Sbjct: 207 tctggtcaacttcaccactgagcaacttcatgtacccaccaccacagtcaagcttttgct 148
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | || || |||| ||||||||||||||| | |||| | |
Sbjct: 147 catgcttgacggagaattggaagactagtgtctgatccttgttgctgaatttagggaact 88
Query: 1021 cggctgaaatggcatagaacct 1042
| |||||||| |||||||||||
Sbjct: 87 cagctgaaatagcatagaacct 66
>gb|CB239849.1|CB239849 RSH17F03 two-month-old roots from clone 'Beaupre' grown for 19 days
under restricted irrigation Populus trichocarpa x Populus
deltoides cDNA 5', mRNA sequence
Length = 558
Score = 111 bits (56), Expect = 6e-023
Identities = 210/262 (80%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 457 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 398
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||| ||||| || ||||||||||| |||
Sbjct: 397 tctggtcaacttcaccactgagcaacttcatgtacccaccaccacagtcaagctttcgct 338
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | || || |||| ||||||||||||||| | |||| | |
Sbjct: 337 catgcttgacggagaattggaagactagtgtctgatccttgttgctgaatttagggaact 278
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| ||||||||||| || || || | || ||||||||||| | || |
Sbjct: 277 cagctgaaatagcatagaacctatagtcttcacttgtttggatacctttgtcattggggt 218
Query: 1081 ctccattccattttcccgaagt 1102
|||||||||||||||| |||||
Sbjct: 217 ctccattccattttccagaagt 196
>gb|DN500085.1|DN500085 UB17CPC02.5pR Populus active cambium cDNA library Populus tremula
cDNA clone UB17CPC02 5', mRNA sequence
Length = 769
Score = 111 bits (56), Expect = 6e-023
Identities = 210/262 (80%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| |||||||||||||||||||||| || ||||| | || || || ||| ||||||
Sbjct: 436 tgtatccacagatatctggtccaaacacgatactgtacggggtatcacccccacatttct 377
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||||||||| || || |||||||| ||||
Sbjct: 376 tctggtcaacttcaccactgagcaacttcatgtagccaccaccacaatcaagcttttgct 317
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | || || |||| ||||||||||||||| |||||| | |
Sbjct: 316 catgcttgacggagaattggaaaacaagtgtctgatccttgttgctgaattcagggaact 257
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| | |||||| |||||||||||||| || || | || ||||||||||| || | |
Sbjct: 256 cagatgaaatagcatagaacctgtagtcttcacttgtttggatacctttgtcatcagggt 197
Query: 1081 ctccattccattttcccgaagt 1102
|||||||||||||||| |||||
Sbjct: 196 ctccattccattttccagaagt 175
>gb|BU817280.1|BU817280 UA15CPA06 Populus tremula cambium cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 377
Score = 107 bits (54), Expect = 1e-021
Identities = 203/252 (80%), Gaps = 1/252 (0%)
Strand = Plus / Minus
Query: 846 ccacagatatctggtcc-aaacataatgctgtaagatgtgtctccaccaaatttcttctg 904
||||||||||||||||| |||||| || ||||| | || || |||||| ||||||||||
Sbjct: 374 ccacagatatctggtcccaaacatgatactgtacggggtatcaccaccacatttcttctg 315
Query: 905 gtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgtg 964
||| || ||||||| ||||| || | ||||||||| || || || ||||| ||||| ||
Sbjct: 314 gtcaacttcaccactgagcaacttcatgtagccaccaccacaatctagcttttgctcatg 255
Query: 965 cttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcggc 1024
||| || ||||| || | || || |||| ||||||||||||||| |||||| | || ||
Sbjct: 254 cttgacggagaattggaaaacaagtgtctgatccttgttgctgaattcagggaactcagc 195
Query: 1025 tgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcatctcc 1084
|||||| |||||||||||||| || || | || ||||||||||| || | |||||
Sbjct: 194 tgaaatagcatagaacctgtagtcttcacttgtttggatacctttgtcatcagggtctcc 135
Query: 1085 attccattttcc 1096
||||||||||||
Sbjct: 134 attccattttcc 123
>gb|CV236042.1|CV236042 WS01222.B21_J20 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01222_J20 3', mRNA sequence
Length = 624
Score = 99.6 bits (50), Expect = 2e-019
Identities = 155/190 (81%)
Strand = Plus / Plus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 432 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 491
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||| ||||| || ||||||||||| ||||
Sbjct: 492 tctggtcaacttcaccactgagcaacttcatgtacccaccaccacagtcaagcttttgct 551
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| || ||||| || | || || |||| ||||||||||||||| | |||| | |
Sbjct: 552 catgcttgacggagaattggaagactagtgtctgatccttgttgctgaatttagggaact 611
Query: 1021 cggctgaaat 1030
| ||||||||
Sbjct: 612 cagctgaaat 621
>gb|DT508141.1|DT508141 WS02420.BR_C20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_C20 5', mRNA sequence
Length = 641
Score = 97.6 bits (49), Expect = 1e-018
Identities = 139/169 (82%)
Strand = Plus / Plus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 14 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 73
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||| ||||| || ||||||||||| ||||
Sbjct: 74 tctggtcaacttcaccactgagcaacttcatgtacccaccaccacagtcaagcttttgct 133
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaa 1009
| ||||| || ||||| || | || || |||| |||||||||||||||
Sbjct: 134 catgcttgacggagaattggaagactagtgtctgatccttgttgctgaa 182
>gb|BP925843.1|BP925843 BP925843 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-051_I17.f 5', mRNA sequence
Length = 379
Score = 87.7 bits (44), Expect = 9e-016
Identities = 122/148 (82%)
Strand = Plus / Minus
Query: 898 tcttctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttct 957
|||||||||| || ||||||| ||||| || | ||||||||| || || |||||||| |
Sbjct: 379 tcttctggtcaacttcaccactgagcaacttcaggtagccaccaccacaatcaagctttt 320
Query: 958 gctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggt 1017
|||| ||||| || ||||| || | || || |||| ||||||||||||||| ||||||
Sbjct: 319 gctcatgcttgacggagaattgaaaaacaagtgtctgatccttgttgctgaattcaggga 260
Query: 1018 attcggctgaaatggcatagaacctgta 1045
| || |||||||| ||||||||||||||
Sbjct: 259 actcagctgaaatagcatagaacctgta 232
>gb|CN192550.1|CN192550 PtdH106 hybrid poplar systemically wound-induced leaf cDNA library
Populus trichocarpa x Populus deltoides cDNA 5, mRNA
sequence
Length = 383
Score = 85.7 bits (43), Expect = 4e-015
Identities = 106/127 (83%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
|||| ||||| ||||||||||||||||| || ||||| | || || |||||||||||||
Sbjct: 128 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaatttct 69
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| || ||||||| ||||| || | ||| ||||| || ||||||||||| ||||
Sbjct: 68 tctggtcaacttcaccactgagcaacttcatgtacccaccaccacagtcaagcttttgct 9
Query: 961 cgtgctt 967
| |||||
Sbjct: 8 catgctt 2
>gb|BU818202.1|BU818202 UA27CPB05 Populus tremula cambium cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 310
Score = 81.8 bits (41), Expect = 6e-014
Identities = 138/171 (80%)
Strand = Plus / Minus
Query: 932 gtagccaccgccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggt 991
||||||||| || || |||||||| ||||| ||||| || ||||| || | || || ||
Sbjct: 287 gtagccaccaccacaatcaagcttttgctcatgcttgacggagaattggaaaacaagtgt 228
Query: 992 cttatccttgttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctc 1051
|| ||||||||||||||| |||||| | || |||||||| |||||||||||||| || ||
Sbjct: 227 ctgatccttgttgctgaattcagggaactcagctgaaatagcatagaacctgtagtcttc 168
Query: 1052 ggaggnntgaatacctttgtcctcggcatctccattccattttcccgaagt 1102
| || ||||||||||| || | ||||||||||||||||| |||||
Sbjct: 167 acttgtttggatacctttgtcatcagggtctccattccattttccagaagt 117
>gb|AJ775318.1|AJ775318 AJ775318 Populus euphratica shoot 3-6 months Populus euphratica cDNA
clone P0000300031A06F1, mRNA sequence
Length = 321
Score = 73.8 bits (37), Expect = 1e-011
Identities = 125/155 (80%)
Strand = Plus / Minus
Query: 948 tcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctg 1007
|||||||| ||||| ||||| || ||||| || | || || |||| |||||||||||||
Sbjct: 319 tcaagcttttgctcatgcttgacggagaattggaaaacaagtgtctgatccttgttgctg 260
Query: 1008 aactcagggtattcggctgaaatggcatagaacctgtaatcctcggaggnntgaatacct 1067
|| |||||| | || |||||||| |||||||||||||| || || | || ||||||
Sbjct: 259 aattcagggaactcagctgaaatagcatagaacctgtagtcttcacttgtttggatacct 200
Query: 1068 ttgtcctcggcatctccattccattttcccgaagt 1102
||||| | | |||||||||||||||||| |||||
Sbjct: 199 ttgtcattaggatctccattccattttccagaagt 165
>gb|DT471000.1|DT471000 WS01211.BR_M02 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01211_M02 5', mRNA sequence
Length = 628
Score = 73.8 bits (37), Expect = 1e-011
Identities = 211/266 (79%), Gaps = 4/266 (1%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaattt-c 899
|||| ||||| ||||||||||||||||| || ||||| | || || ||||||||||| |
Sbjct: 453 tgtatccacatatatctggtccaaacatgatactgtatggggtatcaccaccaaattttc 394
Query: 900 ttctggtctacatcaccaccc--agcaatttgacgtagccaccgccgc-agtcaagcttc 956
|||||||| || ||||| | ||||| || | ||| ||||| || | ||||||||||
Sbjct: 393 ttctggtcaacttcacccacttgagcaacttcatgtacccaccaccaccagtcaagcttt 334
Query: 957 tgctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcaggg 1016
||||| ||||| |||||||| || | || || |||| ||||||||||||||| | ||||
Sbjct: 333 tgctcatgcttgacagagaattggaagactagtgtctgatccttgttgctgaatttaggg 274
Query: 1017 tattcggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcg 1076
| || |||||||| ||||||||||| || || || | || ||||||||||| | |
Sbjct: 273 aactcagctgaaatagcatagaacctatagtcttcacttgtttggatacctttgtcattg 214
Query: 1077 gcatctccattccattttcccgaagt 1102
| ||||||||||||||||| |||||
Sbjct: 213 gggtctccattccattttccagaagt 188
>gb|CV271150.1|CV271150 WS0153.B21_O20 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0153_O20 3', mRNA sequence
Length = 930
Score = 65.9 bits (33), Expect = 3e-009
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 846 ccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttctgg 905
||||| ||||| ||||||||||||| ||||| | ||||||||||||||||||||||||
Sbjct: 688 ccacatatatcaggtccaaacataaaactgtatggagtgtctccaccaaatttcttctgg 747
Query: 906 t 906
|
Sbjct: 748 t 748
>gb|BI071400.1|BI071400 C057P16U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 520
Score = 60.0 bits (30), Expect = 2e-007
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 846 ccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttc 899
||||| ||||| ||||||||||||| |||||| | ||||||||||||||||||
Sbjct: 54 ccacatatatcaggtccaaacataaagctgtatggagtgtctccaccaaatttc 1
>gb|CN523263.1|CN523263 GQ015M01.B3_F02 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M01_F02 5', mRNA sequence
Length = 286
Score = 60.0 bits (30), Expect = 2e-007
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 846 ccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttctgg 905
||||| ||||| ||||||||||||| ||||| | ||||||||||||||||||||| ||
Sbjct: 73 ccacatatatcaggtccaaacataaaactgtatggagtgtctccaccaaatttcttcngg 14
Query: 906 t 906
|
Sbjct: 13 t 13
>gb|BP925043.1|BP925043 BP925043 full-length enriched poplar cDNA library Populus nigra cDNA
clone PnFL1-039_M18.f 5', mRNA sequence
Length = 317
Score = 56.0 bits (28), Expect = 3e-006
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 990 gtcttatccttgttgctgaactcagggtattcggctgaaatggcatagaacctgta 1045
|||| ||||||||||||||| |||||| | || ||||| || ||||||||||||||
Sbjct: 284 gtctgatccttgttgctgaattcagggaactcagctgacatagcatagaacctgta 229
>gb|BI069012.1|BI069012 C030P72U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 277
Score = 50.1 bits (25), Expect = 2e-004
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 846 ccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaa 894
||||| ||||| ||||||||||||| |||||| | |||||||||||||
Sbjct: 51 ccacatatatcaggtccaaacataaagctgtatggagtgtctccaccaa 3
>gb|DT504615.1|DT504615 WS01314.B21_B09 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01314_B09 3', mRNA sequence
Length = 758
Score = 48.1 bits (24), Expect = 8e-004
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 856 ctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttctggtc 907
||||||||||||| || ||||| | || || ||||||||||||||||||||
Sbjct: 450 ctggtccaaacatgatactgtatggggtatcaccaccaaatttcttctggtc 501
>gb|CB833367.1|CB833367 R19D04 two-month-old roots from clone 'Beaupre' Populus trichocarpa x
Populus deltoides cDNA 5', mRNA sequence
Length = 530
Score = 46.1 bits (23), Expect = 0.003
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 1000 tgttgctgaactcagggtattcggctgaaatggcatagaacct 1042
|||||||||| |||||| | || |||||||| |||||||||||
Sbjct: 307 tgttgctgaattcagggaactcagctgaaatagcatagaacct 265
>gb|CN193085.1|CN193085 PtdH477 hybrid poplar systemically wound-induced leaf cDNA library
Populus trichocarpa x Populus deltoides cDNA 5, mRNA
sequence
Length = 319
Score = 42.1 bits (21), Expect = 0.050
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 1062 atacctttgtcctcggcatctccattccattttcccgaagt 1102
||||||||||| | || ||||||||||||||||| |||||
Sbjct: 88 atacctttgtcattggggtctccattccattttccagaagt 48
>gb|DT501755.1|DT501755 WS01314.BR_B09 PTxD-IL-FL-A-4 Populus trichocarpa x Populus deltoides
cDNA clone WS01314_B09 5', mRNA sequence
Length = 843
Score = 42.1 bits (21), Expect = 0.050
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 1062 atacctttgtcctcggcatctccattccattttcccgaagt 1102
||||||||||| | || ||||||||||||||||| |||||
Sbjct: 228 atacctttgtcattggggtctccattccattttccagaagt 188
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 127,110
Number of Sequences: 369679
Number of extensions: 127110
Number of successful extensions: 34942
Number of sequences better than 0.5: 51
Number of HSP's better than 0.5 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34836
Number of HSP's gapped (non-prelim): 100
length of query: 1238
length of database: 203,408,664
effective HSP length: 19
effective length of query: 1219
effective length of database: 196,384,763
effective search space: 239393026097
effective search space used: 239393026097
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)