BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4CL
(1986 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|BD224542.1| Materials and methods for the modification ... 151 1e-034
gb|CF402026.1|CF402026 RTWW1_16_B04.g1_A015 Well-watered lo... 62 9e-008
gb|CF402601.1|CF402601 RTWW1_21_D04.g1_A015 Well-watered lo... 62 9e-008
gb|CO367090.1|CO367090 RTK1_32_C09.b1_A029 Roots minus pota... 62 9e-008
gb|DR161478.1|DR161478 RTFE1_12_B08.b1_A029 Roots minus iro... 62 9e-008
gb|CF387559.1|CF387559 RTDR1_20_F12.g1_A015 Loblolly pine r... 56 6e-006
gb|CF471969.1|CF471969 RTDS1_7_B06.g1_A015 Drought-stressed... 56 6e-006
gb|CF471982.1|CF471982 RTDS1_7_B07.g1_A015 Drought-stressed... 56 6e-006
gb|CV035528.1|CV035528 RTNACL1_16_E03.g1_A029 Roots plus ad... 56 6e-006
gb|DR081859.1|DR081859 RTFEPL1_32_G09.g1_A029 Roots plus ad... 56 6e-006
gb|CF401932.1|CF401932 RTWW1_16_B04.b1_A015 Well-watered lo... 54 2e-005
gb|CF402515.1|CF402515 RTWW1_21_D04.b1_A015 Well-watered lo... 54 2e-005
gb|CF473581.1|CF473581 RTWW2_3_F07.g1_A021 Well-watered lob... 54 2e-005
gb|CF473738.1|CF473738 RTWW2_4_E01.g1_A021 Well-watered lob... 54 2e-005
gb|CF478337.1|CF478337 RTWW3_18_E05.g1_A022 Well-watered lo... 54 2e-005
gb|CF479281.1|CF479281 RTWW3_23_E04.b1_A022 Well-watered lo... 54 2e-005
gb|DR016143.1|DR016143 STRS1_8_A11.b1_A034 Shoot tip pitch ... 54 2e-005
gb|DR016971.1|DR016971 STRS1_13_F09.b1_A034 Shoot tip pitch... 54 2e-005
gb|DR017244.1|DR017244 STRS1_15_B04.b1_A034 Shoot tip pitch... 54 2e-005
gb|DR017313.1|DR017313 STRS1_15_B04.g1_A034 Shoot tip pitch... 54 2e-005
gb|DR022275.1|DR022275 STRS1_50_A09.b1_A034 Shoot tip pitch... 54 2e-005
gb|DR048277.1|DR048277 RTBOR1_7_E05.g2_A029 Roots plus adde... 54 2e-005
gb|DR079127.1|DR079127 RTFEPL1_9_F05.b1_A029 Roots plus add... 54 2e-005
gb|DR079274.1|DR079274 RTFEPL1_10_F01.b1_A029 Roots plus ad... 54 2e-005
gb|DR079994.1|DR079994 RTFEPL1_19_H03.b1_A029 Roots plus ad... 54 2e-005
gb|DR081795.1|DR081795 RTFEPL1_32_G09.b1_A029 Roots plus ad... 54 2e-005
gb|DR094995.1|DR094995 STRR1_18_C12.b1_A033 Stem Response R... 54 2e-005
gb|DR095071.1|DR095071 STRR1_18_C12.g1_A033 Stem Response R... 54 2e-005
gb|DR098995.1|DR098995 STRR1_50_E02.b1_A033 Stem Response R... 54 2e-005
gb|DR102163.1|DR102163 STRR1_79_A04.b1_A033 Stem Response R... 54 2e-005
gb|DR745577.1|DR745577 RTCU1_30_E04.g1_A029 Roots plus adde... 54 2e-005
dbj|BD224424.1| Materials and methods for the modification ... 54 2e-005
gb|CO367161.1|CO367161 RTK1_32_C09.g1_A029 Roots minus pota... 48 0.001
gb|DR022347.1|DR022347 STRS1_50_A09.g1_A034 Shoot tip pitch... 46 0.006
gb|DR111859.1|DR111859 RTS1_20_F02.g1_A029 Roots minus sulf... 46 0.006
dbj|BD224423.1| Materials and methods for the modification ... 42 0.086
gb|AW289461.1|AW289461 NXNV001C01F Nsf Xylem Normal wood Ve... 40 0.34
gb|AW289536.1|AW289536 NXNV002B02F Nsf Xylem Normal wood Ve... 40 0.34
gb|BE644238.1|BE644238 NXCI_051_G09_F NXCI (Nsf Xylem Compr... 40 0.34
gb|BF186183.1|BF186183 NXCI_131_C04_F NXCI (Nsf Xylem Compr... 40 0.34
gb|BF186422.1|BF186422 NXCI_137_B11_F NXCI (Nsf Xylem Compr... 40 0.34
gb|BQ634151.1|BQ634151 NXRV064_D06_F NXRV (Nsf Xylem Root w... 40 0.34
gb|BQ702305.1|BQ702305 NXSI_127_C04_F NXSI (Nsf Xylem Side ... 40 0.34
gb|BQ702559.1|BQ702559 NXSI_130_A02_F NXSI (Nsf Xylem Side ... 40 0.34
gb|CD016487.1|CD016487 NXCI_050_C09_F NXCI (Nsf Xylem Compr... 40 0.34
gb|CD028029.1|CD028029 NXNV001C01 Nsf Xylem Normal wood Ver... 40 0.34
gb|CD028108.1|CD028108 NXNV002B02 Nsf Xylem Normal wood Ver... 40 0.34
gb|CF387720.1|CF387720 RTDR1_19_E02.g1_A015 Loblolly pine r... 40 0.34
gb|CF391042.1|CF391042 RTDR3_3_G03.g1_A022 Loblolly pine ro... 40 0.34
gb|CF393502.1|CF393502 RTDR3_13_D03.g1_A022 Loblolly pine r... 40 0.34
gb|CF394030.1|CF394030 RTDS2_2_G09.g1_A021 Drought-stressed... 40 0.34
gb|CF394651.1|CF394651 RTDS2_6_F08.g1_A021 Drought-stressed... 40 0.34
gb|CF398551.1|CF398551 RTDS3_15_H06.g1_A022 Drought-stresse... 40 0.34
gb|CF402273.1|CF402273 RTWW1_19_G06.g1_A015 Well-watered lo... 40 0.34
gb|CF671971.1|CF671971 RTCNT1_60_A12.g1_A029 Root control P... 40 0.34
gb|CO163929.1|CO163929 FLD1_44_E06.g1_A029 Root flooded Pin... 40 0.34
gb|CO166419.1|CO166419 FLD1_61_H04.g1_A029 Root flooded Pin... 40 0.34
gb|CO200299.1|CO200299 GEO2_6_D03.g1_A032 Root gravitropism... 40 0.34
gb|CO201703.1|CO201703 RTCNT2_7_C08.g1_A029 Root control 2 ... 40 0.34
gb|CO361973.1|CO361973 NDL2_8_G01.b1_A029 Needles control 2... 40 0.34
gb|CX651159.1|CX651159 COLD1_50_B11.g1_A029 Root cold Pinus... 40 0.34
gb|DN452712.1|DN452712 EST948511 Sequencing ESTs from loblo... 40 0.34
gb|DR018039.1|DR018039 STRS1_20_D02.b1_A034 Shoot tip pitch... 40 0.34
gb|DR019282.1|DR019282 STRS1_28_H10.g1_A034 Shoot tip pitch... 40 0.34
gb|DR055128.1|DR055128 RTCA1_21_E12.g2_A029 Roots minus cal... 40 0.34
gb|DR071752.1|DR071752 RTDK1_21_H05.g1_A029 Roots, dark Pin... 40 0.34
gb|DR092921.1|DR092921 STRR1_5_A01.b1_A033 Stem Response Re... 40 0.34
gb|DR092999.1|DR092999 STRR1_5_A01.g1_A033 Stem Response Re... 40 0.34
gb|DR096293.1|DR096293 STRR1_27_C01.b1_A033 Stem Response R... 40 0.34
gb|DR101554.1|DR101554 STRR1_74_D06.b1_A033 Stem Response R... 40 0.34
gb|DR102325.1|DR102325 STRR1_80_G02.b1_A033 Stem Response R... 40 0.34
gb|DR102707.1|DR102707 STRR1_83_E07.b1_A033 Stem Response R... 40 0.34
gb|DR116726.1|DR116726 RTMG1_2_A01.g1_A029 Roots minus magn... 40 0.34
gb|DR167575.1|DR167575 RTPHOS1_19_E04.g1_A029 Roots minus p... 40 0.34
gb|DR181865.1|DR181865 RTMNUT1_41_B04.g1_A029 Roots minus m... 40 0.34
gb|DR744549.1|DR744549 RTCU1_23_E12.b1_A029 Roots plus adde... 40 0.34
gb|DR744616.1|DR744616 RTCU1_23_E12.g1_A029 Roots plus adde... 40 0.34
gb|U12012.1|PTU12012 Pinus taeda PT4CL1 4-coumarate-CoA lig... 40 0.34
gb|U12013.1|PTU12013 Pinus taeda PT4CL2 4-coumarate-CoA lig... 40 0.34
dbj|BD224332.1| Materials and methods for the modification ... 40 0.34
dbj|BD224366.1| Materials and methods for the modification ... 40 0.34
dbj|BD272988.1| Materials and methods for the modification ... 40 0.34
gb|BE451806.1|BE451806 NXCI_002_E01_F NXCI (Nsf Xylem Compr... 38 1.3
gb|BE761948.1|BE761948 NXCI_075_B08_F NXCI (Nsf Xylem Compr... 38 1.3
gb|BF169555.1|BF169555 NXCI_124_B09_F NXCI (Nsf Xylem Compr... 38 1.3
gb|BF517486.1|BF517486 NXSI_022_F01_F NXSI (Nsf Xylem Side ... 38 1.3
gb|BF518354.1|BF518354 NXSI_038_D08_F NXSI (Nsf Xylem Side ... 38 1.3
gb|BG039261.1|BG039261 NXSI_097_A01_F NXSI (Nsf Xylem Side ... 38 1.3
gb|BG040511.1|BG040511 NXSI_112_A05_F NXSI (Nsf Xylem Side ... 38 1.3
gb|BG040515.1|BG040515 NXSI_112_B02_F NXSI (Nsf Xylem Side ... 38 1.3
gb|BQ702347.1|BQ702347 NXSI_127_F06_F NXSI (Nsf Xylem Side ... 38 1.3
gb|CF387845.1|CF387845 RTDR1_18_H09.g1_A015 Loblolly pine r... 38 1.3
gb|CF390990.1|CF390990 RTDR3_3_G03.b1_A022 Loblolly pine ro... 38 1.3
gb|CF393438.1|CF393438 RTDR3_13_D03.b1_A022 Loblolly pine r... 38 1.3
gb|CF400491.1|CF400491 RTWW1_5_D06.g1_A015 Well-watered lob... 38 1.3
gb|CF402671.1|CF402671 RTWW1_22_B05.b1_A015 Well-watered lo... 38 1.3
gb|CF402757.1|CF402757 RTWW1_22_B05.g1_A015 Well-watered lo... 38 1.3
gb|CF475453.1|CF475453 RTWW2_12_E05.b1_A021 Well-watered lo... 38 1.3
gb|CF475506.1|CF475506 RTWW2_12_E05.g1_A021 Well-watered lo... 38 1.3
gb|CF478791.1|CF478791 RTWW3_15_E03.b1_A022 Well-watered lo... 38 1.3
gb|CF669166.1|CF669166 RTCNT1_41_D01.b1_A029 Root control P... 38 1.3
gb|CF669179.1|CF669179 RTCNT1_41_E02.b1_A029 Root control P... 38 1.3
gb|CF669432.1|CF669432 RTCNT1_43_G10.b1_A029 Root control P... 38 1.3
gb|CN783871.1|CN783871 EST782562 Sequencing ESTs from loblo... 38 1.3
gb|CN783961.1|CN783961 EST782652 Sequencing ESTs from loblo... 38 1.3
gb|CN784626.1|CN784626 EST783317 Sequencing ESTs from loblo... 38 1.3
gb|CN785153.1|CN785153 EST783844 Sequencing ESTs from loblo... 38 1.3
gb|CN785816.1|CN785816 EST784507 Sequencing ESTs from loblo... 38 1.3
gb|CO157883.1|CO157883 FLD1_2_G04.g1_A029 Root flooded Pinu... 38 1.3
gb|CO158707.1|CO158707 FLD1_8_E07.g1_A029 Root flooded Pinu... 38 1.3
gb|CO159671.1|CO159671 FLD1_15_B11.b1_A029 Root flooded Pin... 38 1.3
gb|CO159966.1|CO159966 FLD1_17_G04.b1_A029 Root flooded Pin... 38 1.3
gb|CO161341.1|CO161341 FLD1_28_E04.b1_A029 Root flooded Pin... 38 1.3
gb|CO161602.1|CO161602 FLD1_30_A10.b1_A029 Root flooded Pin... 38 1.3
gb|CO162074.1|CO162074 FLD1_33_C05.b1_A029 Root flooded Pin... 38 1.3
gb|CO163221.1|CO163221 FLD1_40_F03.b1_A029 Root flooded Pin... 38 1.3
gb|CO163305.1|CO163305 FLD1_40_F03.g1_A029 Root flooded Pin... 38 1.3
gb|CO163529.1|CO163529 FLD1_42_E08.b1_A029 Root flooded Pin... 38 1.3
gb|CO163612.1|CO163612 FLD1_42_E08.g1_A029 Root flooded Pin... 38 1.3
gb|CO163724.1|CO163724 FLD1_43_H07.b1_A029 Root flooded Pin... 38 1.3
gb|CO164307.1|CO164307 FLD1_47_D11.b1_A029 Root flooded Pin... 38 1.3
gb|CO164379.1|CO164379 FLD1_47_D11.g1_A029 Root flooded Pin... 38 1.3
gb|CO165679.1|CO165679 FLD1_56_F06.b1_A029 Root flooded Pin... 38 1.3
gb|CO165748.1|CO165748 FLD1_56_F06.g1_A029 Root flooded Pin... 38 1.3
gb|CO201630.1|CO201630 RTCNT2_7_C08.b1_A029 Root control 2 ... 38 1.3
gb|CO410191.1|CO410191 EST840576 Sequencing ESTs from loblo... 38 1.3
gb|CO411964.1|CO411964 EST842349 Sequencing ESTs from loblo... 38 1.3
gb|CO413076.1|CO413076 EST843461 Sequencing ESTs from loblo... 38 1.3
gb|CO413545.1|CO413545 EST843930 Sequencing ESTs from loblo... 38 1.3
gb|CO362878.1|CO362878 RTK1_6_G05.b1_A029 Roots minus potas... 38 1.3
gb|CO362963.1|CO362963 RTK1_6_G05.g1_A029 Roots minus potas... 38 1.3
gb|CO364377.1|CO364377 RTK1_15_H04.b1_A029 Roots minus pota... 38 1.3
gb|CV034323.1|CV034323 RTNACL1_40_D07.b1_A029 Roots plus ad... 38 1.3
gb|CV034392.1|CV034392 RTNACL1_40_D07.g1_A029 Roots plus ad... 38 1.3
gb|CV134425.1|CV134425 EST845634 Sequencing ESTs from loblo... 38 1.3
gb|CV136377.1|CV136377 EST847586 Sequencing ESTs from loblo... 38 1.3
gb|CV136381.1|CV136381 EST847590 Sequencing ESTs from loblo... 38 1.3
gb|CV137146.1|CV137146 EST848355 Sequencing ESTs from loblo... 38 1.3
gb|CV137768.1|CV137768 EST848977 Sequencing ESTs from loblo... 38 1.3
gb|CV137969.1|CV137969 EST849178 Sequencing ESTs from loblo... 38 1.3
gb|CV138287.1|CV138287 EST849496 Sequencing ESTs from loblo... 38 1.3
gb|CV138491.1|CV138491 EST849700 Sequencing ESTs from loblo... 38 1.3
gb|CV139156.1|CV139156 EST850365 Sequencing ESTs from loblo... 38 1.3
gb|CV143548.1|CV143548 EST854757 Sequencing ESTs from loblo... 38 1.3
gb|CV144016.1|CV144016 EST855225 Sequencing ESTs from loblo... 38 1.3
gb|CV146154.1|CV146154 EST857363 Sequencing ESTs from loblo... 38 1.3
gb|CV146605.1|CV146605 EST857814 Sequencing ESTs from loblo... 38 1.3
gb|CV146798.1|CV146798 EST858007 Sequencing ESTs from loblo... 38 1.3
gb|CV147398.1|CV147398 EST858607 Sequencing ESTs from loblo... 38 1.3
gb|CV147667.1|CV147667 EST858876 Sequencing ESTs from loblo... 38 1.3
gb|CV147747.1|CV147747 EST858956 Sequencing ESTs from loblo... 38 1.3
gb|CV147784.1|CV147784 EST858993 Sequencing ESTs from loblo... 38 1.3
gb|CV148583.1|CV148583 EST859792 Sequencing ESTs from loblo... 38 1.3
gb|CX647811.1|CX647811 COLD1_20_G12.b1_A029 Root cold Pinus... 38 1.3
gb|CX714585.1|CX714585 RTPQ1_23_E02.g1_A032 Roots treated w... 38 1.3
gb|DN446749.1|DN446749 EST942548 Sequencing ESTs from loblo... 38 1.3
gb|DN447358.1|DN447358 EST943157 Sequencing ESTs from loblo... 38 1.3
gb|DN447740.1|DN447740 EST943539 Sequencing ESTs from loblo... 38 1.3
gb|DN447985.1|DN447985 EST943784 Sequencing ESTs from loblo... 38 1.3
gb|DN448186.1|DN448186 EST943985 Sequencing ESTs from loblo... 38 1.3
gb|DN449228.1|DN449228 EST945027 Sequencing ESTs from loblo... 38 1.3
gb|DN449444.1|DN449444 EST945243 Sequencing ESTs from loblo... 38 1.3
gb|DN450507.1|DN450507 EST946306 Sequencing ESTs from loblo... 38 1.3
gb|DN451592.1|DN451592 EST947391 Sequencing ESTs from loblo... 38 1.3
gb|DN452512.1|DN452512 EST948311 Sequencing ESTs from loblo... 38 1.3
gb|DN454185.1|DN454185 EST949984 Sequencing ESTs from loblo... 38 1.3
gb|DN454663.1|DN454663 EST950462 Sequencing ESTs from loblo... 38 1.3
gb|DN454874.1|DN454874 EST950673 Sequencing ESTs from loblo... 38 1.3
gb|DN454882.1|DN454882 EST950681 Sequencing ESTs from loblo... 38 1.3
gb|DN455315.1|DN455315 EST951114 Sequencing ESTs from loblo... 38 1.3
gb|DN456672.1|DN456672 EST952471 Sequencing ESTs from loblo... 38 1.3
gb|DN456971.1|DN456971 EST952770 Sequencing ESTs from loblo... 38 1.3
gb|DN458059.1|DN458059 EST953858 Sequencing ESTs from loblo... 38 1.3
gb|DN458174.1|DN458174 EST953973 Sequencing ESTs from loblo... 38 1.3
gb|DN459049.1|DN459049 EST954848 Sequencing ESTs from loblo... 38 1.3
gb|DN460714.1|DN460714 EST956513 Sequencing ESTs from loblo... 38 1.3
gb|DN464100.1|DN464100 EST959899 Sequencing ESTs from loblo... 38 1.3
gb|DN464945.1|DN464945 EST960744 Sequencing ESTs from loblo... 38 1.3
gb|DN465112.1|DN465112 EST960911 Sequencing ESTs from loblo... 38 1.3
gb|DR011385.1|DR011385 HEAT1_5_H10.b1_A029 Root at 37 C for... 38 1.3
gb|DR011468.1|DR011468 HEAT1_5_H10.g1_A029 Root at 37 C for... 38 1.3
gb|DR011475.1|DR011475 HEAT1_6_A06.b1_A029 Root at 37 C for... 38 1.3
gb|DR011552.1|DR011552 HEAT1_6_A06.g1_A029 Root at 37 C for... 38 1.3
gb|DR012113.1|DR012113 HEAT1_10_F12.b1_A029 Root at 37 C fo... 38 1.3
gb|DR012707.1|DR012707 HEAT1_14_B11.g1_A029 Root at 37 C fo... 38 1.3
gb|DR012713.1|DR012713 HEAT1_14_C05.g1_A029 Root at 37 C fo... 38 1.3
gb|DR012797.1|DR012797 HEAT1_15_C09.b1_A029 Root at 37 C fo... 38 1.3
gb|DR014079.1|DR014079 HEAT1_23_F08.b1_A029 Root at 37 C fo... 38 1.3
gb|DR017117.1|DR017117 STRS1_14_E01.b1_A034 Shoot tip pitch... 38 1.3
gb|DR017270.1|DR017270 STRS1_15_E04.b1_A034 Shoot tip pitch... 38 1.3
gb|DR017344.1|DR017344 STRS1_15_E04.g1_A034 Shoot tip pitch... 38 1.3
gb|DR017448.1|DR017448 STRS1_16_H02.b1_A034 Shoot tip pitch... 38 1.3
gb|DR017489.1|DR017489 STRS1_16_D04.g1_A034 Shoot tip pitch... 38 1.3
gb|DR019194.1|DR019194 STRS1_28_H10.b2_A034 Shoot tip pitch... 38 1.3
gb|DR022016.1|DR022016 STRS1_48_G07.b1_A034 Shoot tip pitch... 38 1.3
gb|DR022096.1|DR022096 STRS1_48_G07.g1_A034 Shoot tip pitch... 38 1.3
gb|DR023489.1|DR023489 STRS1_58_B10.b1_A034 Shoot tip pitch... 38 1.3
gb|DR049100.1|DR049100 RTBOR1_13_H01.b1_A029 Roots plus add... 38 1.3
gb|DR049567.1|DR049567 RTBOR1_17_C03.g1_A029 Roots plus add... 38 1.3
gb|DR050029.1|DR050029 RTBOR1_20_G08.g1_A029 Roots plus add... 38 1.3
gb|DR050534.1|DR050534 RTBOR1_24_D07.b1_A029 Roots plus add... 38 1.3
gb|DR050615.1|DR050615 RTBOR1_24_D07.g1_A029 Roots plus add... 38 1.3
gb|DR050832.1|DR050832 RTBOR1_26_A04.b1_A029 Roots plus add... 38 1.3
gb|DR050907.1|DR050907 RTBOR1_26_A04.g1_A029 Roots plus add... 38 1.3
gb|DR051447.1|DR051447 RTBOR1_30_D09.b1_A029 Roots plus add... 38 1.3
gb|DR051890.1|DR051890 RTCA1_1_C10.b1_A029 Roots minus calc... 38 1.3
gb|DR053566.1|DR053566 RTCA1_12_A09.b1_A029 Roots minus cal... 38 1.3
gb|DR054023.1|DR054023 RTCA1_14_F07.g1_A029 Roots minus cal... 38 1.3
gb|DR055335.1|DR055335 RTCA1_23_B12.b1_A029 Roots minus cal... 38 1.3
gb|DR055410.1|DR055410 RTCA1_23_B12.g2_A029 Roots minus cal... 38 1.3
gb|DR055704.1|DR055704 RTCA1_25_H05.b1_A029 Roots minus cal... 38 1.3
gb|DR055784.1|DR055784 RTCA1_25_H05.g1_A029 Roots minus cal... 38 1.3
gb|DR058335.1|DR058335 RTNIT1_11_E07.b1_A029 Roots minus ni... 38 1.3
gb|DR058422.1|DR058422 RTNIT1_11_E07.g1_A029 Roots minus ni... 38 1.3
gb|DR058707.1|DR058707 RTNIT1_13_A01.g1_A029 Roots minus ni... 38 1.3
gb|DR059597.1|DR059597 RTNIT1_18_D06.g1_A029 Roots minus ni... 38 1.3
gb|DR069800.1|DR069800 RTDK1_9_B09.g1_A029 Roots, dark Pinu... 38 1.3
gb|DR070267.1|DR070267 RTDK1_12_F12.b1_A029 Roots, dark Pin... 38 1.3
gb|DR070354.1|DR070354 RTDK1_12_F12.g1_A029 Roots, dark Pin... 38 1.3
gb|DR079816.1|DR079816 RTFEPL1_18_A02.b1_A029 Roots plus ad... 38 1.3
gb|DR080079.1|DR080079 RTFEPL1_20_C07.b1_A029 Roots plus ad... 38 1.3
gb|DR088368.1|DR088368 RTAL1_1_E10.b1_A029 Roots plus added... 38 1.3
gb|DR088435.1|DR088435 RTAL1_1_E10.g1_A029 Roots plus added... 38 1.3
gb|DR099297.1|DR099297 STRR1_54_C03.g1_A033 Stem Response R... 38 1.3
gb|DR100567.1|DR100567 STRR1_65_D03.b1_A033 Stem Response R... 38 1.3
gb|DR101627.1|DR101627 STRR1_74_E01.g1_A033 Stem Response R... 38 1.3
gb|DR118856.1|DR118856 RTMG1_19_D04.g1_A029 Roots minus mag... 38 1.3
gb|DR160847.1|DR160847 RTFE1_8_H09.b1_A029 Roots minus iron... 38 1.3
gb|DR160941.1|DR160941 RTFE1_8_H09.g1_A029 Roots minus iron... 38 1.3
gb|DR161409.1|DR161409 RTFE1_11_D06.g1_A029 Roots minus iro... 38 1.3
gb|DR163927.1|DR163927 RTFE1_45_F10.g1_A029 Roots minus iro... 38 1.3
gb|DR164029.1|DR164029 RTFE1_46_H11.b1_A029 Roots minus iro... 38 1.3
gb|DR164119.1|DR164119 RTFE1_46_H11.g1_A029 Roots minus iro... 38 1.3
gb|DR164143.1|DR164143 RTFE1_47_C07.b1_A029 Roots minus iro... 38 1.3
gb|DR164218.1|DR164218 RTFE1_47_C07.g1_A029 Roots minus iro... 38 1.3
gb|DR168466.1|DR168466 RTPHOS1_25_D09.g1_A029 Roots minus p... 38 1.3
gb|DR181460.1|DR181460 RTMNUT1_39_C05.b2_A029 Roots minus m... 38 1.3
gb|DR181546.1|DR181546 RTMNUT1_39_C05.g2_A029 Roots minus m... 38 1.3
gb|DR384267.1|DR384267 RTHG1_1_D08.b1_A029 Roots plus added... 38 1.3
gb|DR384562.1|DR384562 RTHG1_3_C02.b1_A029 Roots plus added... 38 1.3
gb|DR387041.1|DR387041 RTHG1_19_B09.b1_A029 Roots plus adde... 38 1.3
gb|DR387109.1|DR387109 RTHG1_19_B09.g1_A029 Roots plus adde... 38 1.3
gb|DR388551.1|DR388551 RTHG1_29_A06.b1_A029 Roots plus adde... 38 1.3
gb|DR742014.1|DR742014 RTCU1_1_D12.b1_A029 Roots plus added... 38 1.3
gb|DR742091.1|DR742091 RTCU1_1_D12.g1_A029 Roots plus added... 38 1.3
gb|DR744092.1|DR744092 RTCU1_20_E01.b1_A029 Roots plus adde... 38 1.3
gb|DR744562.1|DR744562 RTCU1_23_G04.b1_A029 Roots plus adde... 38 1.3
gb|DR744632.1|DR744632 RTCU1_23_G04.g1_A029 Roots plus adde... 38 1.3
gb|DR746019.1|DR746019 RTCU1_34_D11.b1_A029 Roots plus adde... 38 1.3
gb|DR746197.1|DR746197 RTCU1_35_H01.b1_A029 Roots plus adde... 38 1.3
gb|DT624968.1|DT624968 EST1159243 Sequencing ESTs from lobl... 38 1.3
gb|DT625140.1|DT625140 EST1159415 Sequencing ESTs from lobl... 38 1.3
gb|DT625229.1|DT625229 EST1159504 Sequencing ESTs from lobl... 38 1.3
gb|DT625288.1|DT625288 EST1159563 Sequencing ESTs from lobl... 38 1.3
gb|U39404.1|PTU39404 Pinus taeda xylem 4-coumarate:CoA liga... 38 1.3
gb|U39405.1|PTU39405 Pinus taeda xylem 4-coumarate:CoA liga... 38 1.3
gb|AF144499.1|AF144499 Pinus banksiana clone 1 4-coumarate:... 38 1.3
gb|AF144500.1|AF144500 Pinus banksiana clone 6 4-coumarate:... 38 1.3
dbj|BD224288.1| Materials and methods for the modification ... 38 1.3
dbj|BD224375.1| Materials and methods for the modification ... 38 1.3
gb|AA739742.1|AA739742 507 PtIFG2 Pinus taeda cDNA clone 88... 36 5.3
gb|BX255565.1|BX255565 BX255565 Pinus pinaster differenciat... 36 5.3
gb|BF609902.1|BF609902 NXSI_052_D04_F NXSI (Nsf Xylem Side ... 36 5.3
gb|BG040771.1|BG040771 NXSI_114_H02_F NXSI (Nsf Xylem Side ... 36 5.3
gb|CX653107.1|CX653107 COLD1_63_A08.g1_A029 Root cold Pinus... 36 5.3
>dbj|BD224542.1| Materials and methods for the modification of plant lignin content
Length = 2043
Score = 151 bits (76), Expect = 1e-034
Identities = 307/384 (79%)
Strand = Plus / Plus
Query: 1158 gctcggacagggttatgggatgacagaggcaggcccggtgctctcgatgtgcatggcgtt 1217
|||||||||||| ||||||||||| ||||| ||||||||||| | |||||| ||| ||
Sbjct: 1072 gctcggacagggctatgggatgacggaggcgggcccggtgctggcaatgtgcccggcatt 1131
Query: 1218 tgccaaggagccgttaccggtgaagtccggtgcctgcggcacggtggtgaggaatgccga 1277
||| ||||||||||| | | ||||| || || ||||| || || |||||||| || ||
Sbjct: 1132 tgcaaaggagccgttcgagatcaagtcaggcgcatgcgggaccgtcgtgaggaacgcgga 1191
Query: 1278 gctaaagatcatcgacccggagaccgggctgtccctccaccgcaaccagcccggggagat 1337
| | |||||| ||||||||||||| ||| || |||| || |||||| |||| |||||
Sbjct: 1192 gatgaagatcgtcgacccggagacaggggcctcgctcccgcggaaccaggccggcgagat 1251
Query: 1338 ttgcatcaggggcaagcagttgatgaaagggtacctcaacaacccggaggcaacggcgaa 1397
|||||| |||| | ||| | |||||||| || || ||| || | ||||| || || ||
Sbjct: 1252 ctgcatccggggtcaccagatcatgaaaggttatctgaacgacgccgaggcgaccgcaaa 1311
Query: 1398 gaccatcgactcggaggggtggctgcacaccggagacattgggtacgtcgacgacggcga 1457
||||| ||| || ||||||||||||||||| ||||| || ||| | ||||| | |||
Sbjct: 1312 taccatagacaaagaagggtggctgcacaccggcgacatcggctacatagacgatgacga 1371
Query: 1458 cgagatcttcatcgtcgaccggctcaaggagctcatcaagtacaaggggttccaagtcgc 1517
|||| ||||||| ||||| ||| | ||||| ||||||||||||||||| ||||| || ||
Sbjct: 1372 cgagctcttcattgtcgatcggttgaaggaactcatcaagtacaagggcttccaggttgc 1431
Query: 1518 tccggcggagctcgaggccatgct 1541
|||||| ||||| ||||| |||||
Sbjct: 1432 tccggccgagctagaggcaatgct 1455
Score = 71.9 bits (36), Expect = 1e-010
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 739 tcgtccggcacgacggggctgcccaagggggtgatgctgtcgcaccgtgggctggtaacc 798
||||| |||||||||||||| |||||||| |||||||| ||||| | || | || |||
Sbjct: 653 tcgtcgggcacgacggggcttcccaagggagtgatgcttacgcacaggggtcaagtgacc 712
Query: 799 agcgtggcgcagctcgtcgacggcgacaaccc 830
||||||||||||| |||||||| ||||||||
Sbjct: 713 agcgtggcgcagcaggtcgacggagacaaccc 744
Score = 50.1 bits (25), Expect = 4e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1645 atcaccgaggacgagatcaagcagtacgtggcgaaacaggtggtgttctacaagagg 1701
|||||||||||||| |||||||| ||| | |||| ||||| ||||| |||||||||
Sbjct: 1559 atcaccgaggacgaaatcaagcaatacatctcgaagcaggtcgtgttttacaagagg 1615
Score = 44.1 bits (22), Expect = 0.022
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 487 aacccgctccacaccccgcccgagatcgccaagcaggc 524
|||||| || |||||||| ||||||||||||||||||
Sbjct: 410 aacccgttctacaccccgggcgagatcgccaagcaggc 447
>gb|CF402026.1|CF402026 RTWW1_16_B04.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_16_B04_A015 5', mRNA sequence
Length = 734
Score = 61.9 bits (31), Expect = 9e-008
Identities = 97/119 (81%)
Strand = Plus / Plus
Query: 1177 atgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaaggagccgttaccg 1236
|||||||||||||| |||||||| || ||||| |||| || || |||||||| || |||
Sbjct: 167 atgacagaggcaggaccggtgctatcaatgtgtctggccttcgctaaggagccctttccg 226
Query: 1237 gtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaagatcatcgaccc 1295
|||||||||| | ||||| ||||| || |||||||| || | |||||||| |||||
Sbjct: 227 atgaagtccgggtcgtgcggaacggttgttcggaatgcccagatgaagatcattgaccc 285
Score = 54.0 bits (27), Expect = 2e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1672 gtggcgaaacaggtggtgttctacaagaggctgcacaag 1710
||||| |||||||||||||||||||| | ||||||||||
Sbjct: 662 gtggctaaacaggtggtgttctacaaaaagctgcacaag 700
>gb|CF402601.1|CF402601 RTWW1_21_D04.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_21_D04_A015 5', mRNA sequence
Length = 771
Score = 61.9 bits (31), Expect = 9e-008
Identities = 97/119 (81%)
Strand = Plus / Plus
Query: 1177 atgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaaggagccgttaccg 1236
|||||||||||||| |||||||| || ||||| |||| || || |||||||| || |||
Sbjct: 115 atgacagaggcaggaccggtgctatcaatgtgtctggccttcgctaaggagccctttccg 174
Query: 1237 gtgaagtccggtgcctgcggcacggtggtgaggaatgccgagctaaagatcatcgaccc 1295
|||||||||| | ||||| ||||| || |||||||| || | |||||||| |||||
Sbjct: 175 atgaagtccgggtcgtgcggaacggttgttcggaatgcccagatgaagatcattgaccc 233
Score = 54.0 bits (27), Expect = 2e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1672 gtggcgaaacaggtggtgttctacaagaggctgcacaag 1710
||||| |||||||||||||||||||| | ||||||||||
Sbjct: 610 gtggctaaacaggtggtgttctacaaaaagctgcacaag 648
>gb|CO367090.1|CO367090 RTK1_32_C09.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_32_C09_A029 3', mRNA sequence
Length = 834
Score = 61.9 bits (31), Expect = 9e-008
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 1672 gtggcgaaacaggtggtgttctacaagaggctgcacaag 1710
||||| |||||||||||||||||||||| ||||||||||
Sbjct: 502 gtggccaaacaggtggtgttctacaagaagctgcacaag 540
Score = 40.1 bits (20), Expect = 0.34
Identities = 58/71 (81%)
Strand = Plus / Plus
Query: 1177 atgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaaggagccgttaccg 1236
|||||||||||||| || ||||| || ||||| |||| || || |||||||| | |||
Sbjct: 7 atgacagaggcaggacctgtgctatcaatgtgtctggccttcgctaaggagccctntccg 66
Query: 1237 gtgaagtccgg 1247
||||||||||
Sbjct: 67 atgaagtccgg 77
>gb|DR161478.1|DR161478 RTFE1_12_B08.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_12_B08_A029 3', mRNA sequence
Length = 727
Score = 61.9 bits (31), Expect = 9e-008
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 1671 cgtggcgaaacaggtggtgttctacaagaggctgcacaa 1709
|||||| |||||||||||||||||||||| |||||||||
Sbjct: 133 cgtggccaaacaggtggtgttctacaagaagctgcacaa 171
>gb|CF387559.1|CF387559 RTDR1_20_F12.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_20_F12_A015 5', mRNA
sequence
Length = 740
Score = 56.0 bits (28), Expect = 6e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 723 ggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatg 774
|||||||||||| || || || |||||||||||||| |||||||| ||||||
Sbjct: 547 ggtcgcgctgccttattcatcgggcacgacggggctccccaagggtgtgatg 598
>gb|CF471969.1|CF471969 RTDS1_7_B06.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_7_B06_A015 5', mRNA sequence
Length = 774
Score = 56.0 bits (28), Expect = 6e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 723 ggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatg 774
|||||||||||| || || || |||||||||||||| |||||||| ||||||
Sbjct: 384 ggtcgcgctgccttattcatcgggcacgacggggctccccaagggtgtgatg 435
>gb|CF471982.1|CF471982 RTDS1_7_B07.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_7_B07_A015 5', mRNA sequence
Length = 742
Score = 56.0 bits (28), Expect = 6e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 723 ggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatg 774
|||||||||||| || || || |||||||||||||| |||||||| ||||||
Sbjct: 393 ggtcgcgctgccttattcatcgggcacgacggggctccccaagggtgtgatg 444
>gb|CV035528.1|CV035528 RTNACL1_16_E03.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_16_E03_A029 5', mRNA sequence
Length = 774
Score = 56.0 bits (28), Expect = 6e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 723 ggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatg 774
|||||||||||| || || || |||||||||||||| |||||||| ||||||
Sbjct: 721 ggtcgcgctgccttattcatcgggcacgacggggctccccaagggtgtgatg 772
>gb|DR081859.1|DR081859 RTFEPL1_32_G09.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_32_G09_A029 5', mRNA sequence
Length = 462
Score = 56.0 bits (28), Expect = 6e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 723 ggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatg 774
|||||||||||| || || || |||||||||||||| |||||||| ||||||
Sbjct: 202 ggtcgcgctgccttattcatcgggcacgacggggctccccaagggtgtgatg 253
>gb|CF401932.1|CF401932 RTWW1_16_B04.b1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_16_B04_A015 3', mRNA sequence
Length = 568
Score = 54.0 bits (27), Expect = 2e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1672 gtggcgaaacaggtggtgttctacaagaggctgcacaag 1710
||||| |||||||||||||||||||| | ||||||||||
Sbjct: 90 gtggctaaacaggtggtgttctacaaaaagctgcacaag 128
>gb|CF402515.1|CF402515 RTWW1_21_D04.b1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_21_D04_A015 3', mRNA sequence
Length = 596
Score = 54.0 bits (27), Expect = 2e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1672 gtggcgaaacaggtggtgttctacaagaggctgcacaag 1710
||||| |||||||||||||||||||| | ||||||||||
Sbjct: 115 gtggctaaacaggtggtgttctacaaaaagctgcacaag 153
>gb|CF473581.1|CF473581 RTWW2_3_F07.g1_A021 Well-watered loblolly pine roots WW2 Pinus taeda
cDNA clone RTWW2_3_F07_A021 5', mRNA sequence
Length = 703
Score = 54.0 bits (27), Expect = 2e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1672 gtggcgaaacaggtggtgttctacaagaggctgcacaag 1710
||||| |||||||||||||||||||| | ||||||||||
Sbjct: 529 gtggctaaacaggtggtgttctacaaaaagctgcacaag 567
Score = 54.0 bits (27), Expect = 2e-005
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 1177 atgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaaggagccgttaccg 1236
|||||||||||||| |||||||| || ||||| |||| || || |||||||| || |||
Sbjct: 34 atgacagaggcaggaccggtgctatcaatgtgtctggccttcgctaaggagccctttccg 93
Query: 1237 gtgaagtccgg 1247
||||||||||
Sbjct: 94 atgaagtccgg 104
>gb|CF473738.1|CF473738 RTWW2_4_E01.g1_A021 Well-watered loblolly pine roots WW2 Pinus taeda
cDNA clone RTWW2_4_E01_A021 5', mRNA sequence
Length = 623
Score = 54.0 bits (27), Expect = 2e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1672 gtggcgaaacaggtggtgttctacaagaggctgcacaag 1710
||||| |||||||||||||||||||| | ||||||||||
Sbjct: 552 gtggctaaacaggtggtgttctacaaaaagctgcacaag 590
Score = 54.0 bits (27), Expect = 2e-005
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 1177 atgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaaggagccgttaccg 1236
|||||||||||||| |||||||| || ||||| |||| || || |||||||| || |||
Sbjct: 57 atgacagaggcaggaccggtgctatcaatgtgtctggccttcgctaaggagccctttccg 116
Query: 1237 gtgaagtccgg 1247
||||||||||
Sbjct: 117 atgaagtccgg 127
>gb|CF478337.1|CF478337 RTWW3_18_E05.g1_A022 Well-watered loblolly pine roots WW3 Pinus taeda
cDNA clone RTWW3_18_E05_A022 5', mRNA sequence
Length = 732
Score = 54.0 bits (27), Expect = 2e-005
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 1177 atgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaaggagccgttaccg 1236
|||||||||||||| |||||||| || ||||| |||| || || |||||||| || |||
Sbjct: 458 atgacagaggcaggaccggtgctatcaatgtgtctggccttcgctaaggagccctttccg 517
Query: 1237 gtgaagtccgg 1247
||||||||||
Sbjct: 518 atgaagtccgg 528
Score = 40.1 bits (20), Expect = 0.34
Identities = 44/52 (84%)
Strand = Plus / Plus
Query: 723 ggtcgcgctgccgtactcgtccggcacgacggggctgcccaagggggtgatg 774
|||||||||| | || || || |||||||||||||| || ||||| ||||||
Sbjct: 4 ggtcgcgctgtcttattcatcgggcacgacggggctccctaagggtgtgatg 55
>gb|CF479281.1|CF479281 RTWW3_23_E04.b1_A022 Well-watered loblolly pine roots WW3 Pinus taeda
cDNA clone RTWW3_23_E04_A022 3', mRNA sequence
Length = 625
Score = 54.0 bits (27), Expect = 2e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1672 gtggcgaaacaggtggtgttctacaagaggctgcacaag 1710
||||| |||||||||||||||||||| | ||||||||||
Sbjct: 115 gtggctaaacaggtggtgttctacaaaaagctgcacaag 153
>gb|DR016143.1|DR016143 STRS1_8_A11.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_8_A11_A034 3', mRNA sequence
Length = 845
Score = 54.0 bits (27), Expect = 2e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1672 gtggcgaaacaggtggtgttctacaagaggctgcacaag 1710
||||| |||||||||||||||||||| | ||||||||||
Sbjct: 331 gtggctaaacaggtggtgttctacaaaaagctgcacaag 369
>gb|DR016971.1|DR016971 STRS1_13_F09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_13_F09_A034 3', mRNA sequence
Length = 776
Score = 54.0 bits (27), Expect = 2e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 1177 atgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaaggagccgttaccg 1236
|||||||||||||| |||||||| || ||||| |||| || || |||||||| || |||
Sbjct: 486 atgacagaggcaggaccggtgctatcaatgtgtctggccttcgctaaggagccctttccg 427
Query: 1237 gtgaagtccgg 1247
||||||||||
Sbjct: 426 atgaagtccgg 416
>gb|DR017244.1|DR017244 STRS1_15_B04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_15_B04_A034 3', mRNA sequence
Length = 847
Score = 54.0 bits (27), Expect = 2e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 1177 atgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaaggagccgttaccg 1236
|||||||||||||| |||||||| || ||||| |||| || || |||||||| || |||
Sbjct: 758 atgacagaggcaggaccggtgctatcaatgtgtctggccttcgctaaggagccctttccg 699
Query: 1237 gtgaagtccgg 1247
||||||||||
Sbjct: 698 atgaagtccgg 688
Score = 54.0 bits (27), Expect = 2e-005
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 1672 gtggcgaaacaggtggtgttctacaagaggctgcacaag 1710
||||| |||||||||||||||||||| | ||||||||||
Sbjct: 263 gtggctaaacaggtggtgttctacaaaaagctgcacaag 225
>gb|DR017313.1|DR017313 STRS1_15_B04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_15_B04_A034 5', mRNA sequence
Length = 755
Score = 54.0 bits (27), Expect = 2e-005
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 1672 gtggcgaaacaggtggtgttctacaagaggctgcacaag 1710
||||| |||||||||||||||||||| | ||||||||||
Sbjct: 479 gtggctaaacaggtggtgttctacaaaaagctgcacaag 441
>gb|DR022275.1|DR022275 STRS1_50_A09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_50_A09_A034 3', mRNA sequence
Length = 811
Score = 54.0 bits (27), Expect = 2e-005
Identities = 60/71 (84%)
Strand = Plus / Minus
Query: 1177 atgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaaggagccgttaccg 1236
|||||||||||||| |||||||| || ||||| |||| || || |||||||| || |||
Sbjct: 405 atgacagaggcaggaccggtgctatcaatgtgtctggccttcgctaaggagccctttccg 346
Query: 1237 gtgaagtccgg 1247
||||||||||
Sbjct: 345 atgaagtccgg 335
>gb|DR048277.1|DR048277 RTBOR1_7_E05.g2_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_7_E05_A029 5', mRNA sequence
Length = 740
Score = 54.0 bits (27), Expect = 2e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1672 gtggcgaaacaggtggtgttctacaagaggctgcacaag 1710
||||| |||||||||||||||||||| | ||||||||||
Sbjct: 474 gtggctaaacaggtggtgttctacaaaaagctgcacaag 512
>gb|DR079127.1|DR079127 RTFEPL1_9_F05.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_9_F05_A029 3', mRNA sequence
Length = 895
Score = 54.0 bits (27), Expect = 2e-005
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 1672 gtggcgaaacaggtggtgttctacaagaggctgcacaag 1710
||||| |||||||||||||||||||| | ||||||||||
Sbjct: 486 gtggctaaacaggtggtgttctacaaaaagctgcacaag 448
>gb|DR079274.1|DR079274 RTFEPL1_10_F01.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_10_F01_A029 3', mRNA sequence
Length = 880
Score = 54.0 bits (27), Expect = 2e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1672 gtggcgaaacaggtggtgttctacaagaggctgcacaag 1710
||||| |||||||||||||||||||| | ||||||||||
Sbjct: 399 gtggctaaacaggtggtgttctacaaaaagctgcacaag 437
>gb|DR079994.1|DR079994 RTFEPL1_19_H03.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_19_H03_A029 3', mRNA sequence
Length = 761
Score = 54.0 bits (27), Expect = 2e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1672 gtggcgaaacaggtggtgttctacaagaggctgcacaag 1710
||||| |||||||||||||||||||| | ||||||||||
Sbjct: 269 gtggctaaacaggtggtgttctacaaaaagctgcacaag 307
>gb|DR081795.1|DR081795 RTFEPL1_32_G09.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_32_G09_A029 3', mRNA sequence
Length = 706
Score = 54.0 bits (27), Expect = 2e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1672 gtggcgaaacaggtggtgttctacaagaggctgcacaag 1710
||||| |||||||||||||||||||| | ||||||||||
Sbjct: 159 gtggctaaacaggtggtgttctacaaaaagctgcacaag 197
>gb|DR094995.1|DR094995 STRR1_18_C12.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_18_C12_A033 3', mRNA sequence
Length = 824
Score = 54.0 bits (27), Expect = 2e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1672 gtggcgaaacaggtggtgttctacaagaggctgcacaag 1710
||||| |||||||||||||||||||| | ||||||||||
Sbjct: 339 gtggctaaacaggtggtgttctacaaaaagctgcacaag 377
>gb|DR095071.1|DR095071 STRR1_18_C12.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_18_C12_A033 5', mRNA sequence
Length = 753
Score = 54.0 bits (27), Expect = 2e-005
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 1177 atgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaaggagccgttaccg 1236
|||||||||||||| |||||||| || ||||| |||| || || |||||||| || |||
Sbjct: 332 atgacagaggcaggaccggtgctatcaatgtgtctggccttcgctaaggagccctttccg 391
Query: 1237 gtgaagtccgg 1247
||||||||||
Sbjct: 392 atgaagtccgg 402
>gb|DR098995.1|DR098995 STRR1_50_E02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_50_E02_A033 3', mRNA sequence
Length = 601
Score = 54.0 bits (27), Expect = 2e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1672 gtggcgaaacaggtggtgttctacaagaggctgcacaag 1710
||||| |||||||||||||| ||||||| ||||||||||
Sbjct: 243 gtggccaaacaggtggtgttttacaagaagctgcacaag 281
>gb|DR102163.1|DR102163 STRR1_79_A04.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_79_A04_A033 3', mRNA sequence
Length = 763
Score = 54.0 bits (27), Expect = 2e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1672 gtggcgaaacaggtggtgttctacaagaggctgcacaag 1710
||||| |||||||||||||||||||| | ||||||||||
Sbjct: 262 gtggctaaacaggtggtgttctacaaaaagctgcacaag 300
>gb|DR745577.1|DR745577 RTCU1_30_E04.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_30_E04_A029 5', mRNA sequence
Length = 573
Score = 54.0 bits (27), Expect = 2e-005
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1672 gtggcgaaacaggtggtgttctacaagaggctgcacaag 1710
||||| |||||||||||||||||||| | ||||||||||
Sbjct: 84 gtggctaaacaggtggtgttctacaaaaagctgcacaag 122
>dbj|BD224424.1| Materials and methods for the modification of plant lignin content
Length = 357
Score = 54.0 bits (27), Expect = 2e-005
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 1177 atgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaaggagccgttaccg 1236
|||||||||||||| |||||||| || ||||| |||| || || |||||||| || |||
Sbjct: 283 atgacagaggcaggaccggtgctatcaatgtgtctggccttcgctaaggagccctttccg 342
Query: 1237 gtgaagtccgg 1247
||||||||||
Sbjct: 343 atgaagtccgg 353
>gb|CO367161.1|CO367161 RTK1_32_C09.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_32_C09_A029 5', mRNA sequence
Length = 682
Score = 48.1 bits (24), Expect = 0.001
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 739 tcgtccggcacgacggggctgcccaagggggtgatg 774
||||| |||||||||||||| |||||||| ||||||
Sbjct: 17 tcgtcgggcacgacggggctccccaagggtgtgatg 52
Score = 46.1 bits (23), Expect = 0.006
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 1177 atgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaaggagccgttaccg 1236
|||||||||||||| || ||||| || ||||| |||| || || |||||||| || |||
Sbjct: 455 atgacagaggcaggacctgtgctatcaatgtgtctggccttcgctaaggagccctttccg 514
Query: 1237 gtgaagtccgg 1247
||||||||||
Sbjct: 515 atgaagtccgg 525
>gb|DR022347.1|DR022347 STRS1_50_A09.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_50_A09_A034 5', mRNA sequence
Length = 556
Score = 46.1 bits (23), Expect = 0.006
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1672 gtggcgaaacaggtggtgttctacaagaggctgca 1706
||||| |||||||||||||||||||| | ||||||
Sbjct: 466 gtggctaaacaggtggtgttctacaaaaagctgca 432
>gb|DR111859.1|DR111859 RTS1_20_F02.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_20_F02_A029 5', mRNA sequence
Length = 816
Score = 46.1 bits (23), Expect = 0.006
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1672 gtggcgaaacaggtggtgttctacaagaggctgcacaag 1710
||||| |||||||||||||||||||| | ||||| ||||
Sbjct: 515 gtggccaaacaggtggtgttctacaaaaagctgcgcaag 553
Score = 38.2 bits (19), Expect = 1.3
Identities = 58/71 (81%)
Strand = Plus / Plus
Query: 1177 atgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaaggagccgttaccg 1236
|||||||||||||| || ||||| || ||||| |||| || || |||||||| || |||
Sbjct: 20 atgacagaggcaggacctgtgctatcaatgtgtctggccttcgctaaggagccctttccg 79
Query: 1237 gtgaagtccgg 1247
|||||||||
Sbjct: 80 acgaagtccgg 90
>dbj|BD224423.1| Materials and methods for the modification of plant lignin content
Length = 338
Score = 42.1 bits (21), Expect = 0.086
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 1177 atgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaaggagcc 1229
|||||||||||||| |||||||| || ||||| |||| || || ||||||||
Sbjct: 283 atgacagaggcaggaccggtgctatcaatgtgtctggccttcgctaaggagcc 335
>gb|AW289461.1|AW289461 NXNV001C01F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV001C01 5', mRNA sequence
Length = 462
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 182 tcgggcagggctacggcatgacagaagcaggcccggtgct 221
>gb|AW289536.1|AW289536 NXNV002B02F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV002B02 5', mRNA sequence
Length = 460
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 106 tcgggcagggctacggcatgacagaagcaggcccggtgct 145
>gb|BE644238.1|BE644238 NXCI_051_G09_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_051_G09 5' similar to Arabidopsis
thaliana sequence At3g21240 putative 4-coumarate:CoA
ligase 2 see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 323
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 91 tcgggcagggctacggcatgacagaagcaggcccggtgct 130
>gb|BF186183.1|BF186183 NXCI_131_C04_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_131_C04 5' similar to Arabidopsis
thaliana sequence At3g21240 putative 4-coumarate:CoA
ligase 2 see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 293
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 44 tcgggcagggctacggcatgacagaagcaggcccggtgct 83
>gb|BF186422.1|BF186422 NXCI_137_B11_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_137_B11 5' similar to Arabidopsis
thaliana sequence At3g21240 putative 4-coumarate:CoA
ligase 2 see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 368
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 44 tcgggcagggctacggcatgacagaagcaggcccggtgct 83
>gb|BQ634151.1|BQ634151 NXRV064_D06_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV064_D06 5' similar to Arabidopsis thaliana
sequence At3g21240 putative 4-coumarate:CoA ligase 2 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 510
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 189 tcgggcagggctacggcatgacagaagcaggcccggtgct 228
>gb|BQ702305.1|BQ702305 NXSI_127_C04_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_127_C04 5' similar to Arabidopsis thaliana
sequence At3g21240 putative 4-coumarate:CoA ligase 2 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 453
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 110 tcgggcagggctacggcatgacagaagcaggcccggtgct 149
>gb|BQ702559.1|BQ702559 NXSI_130_A02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_130_A02 5' similar to Arabidopsis thaliana
sequence At3g21240 putative 4-coumarate:CoA ligase 2 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 553
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 44 tcgggcagggctacggcatgacagaagcaggcccggtgct 83
>gb|CD016487.1|CD016487 NXCI_050_C09_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_050_C09 5' similar to Arabidopsis
thaliana sequence At3g21240 putative 4-coumarate:CoA
ligase 2 see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 196
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 44 tcgggcagggctacggcatgacagaagcaggcccggtgct 83
>gb|CD028029.1|CD028029 NXNV001C01 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV001C01 5' similar to Arabidopsis thaliana sequence
At3g21240 putative 4-coumarate:CoA ligase 2 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 462
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 182 tcgggcagggctacggcatgacagaagcaggcccggtgct 221
>gb|CD028108.1|CD028108 NXNV002B02 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV002B02 5' similar to Arabidopsis thaliana sequence
At3g21240 putative 4-coumarate:CoA ligase 2 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 460
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 106 tcgggcagggctacggcatgacagaagcaggcccggtgct 145
>gb|CF387720.1|CF387720 RTDR1_19_E02.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_19_E02_A015 5', mRNA
sequence
Length = 675
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 438 tcgggcagggctacggcatgacagaagcaggcccggtgct 477
>gb|CF391042.1|CF391042 RTDR3_3_G03.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_3_G03_A022 5', mRNA sequence
Length = 446
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 348 tcgggcagggctacggcatgacagaagcaggcccggtgct 387
>gb|CF393502.1|CF393502 RTDR3_13_D03.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_13_D03_A022 5', mRNA
sequence
Length = 637
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 148 tcgggcagggctacggcatgacagaagcaggcccggtgct 187
>gb|CF394030.1|CF394030 RTDS2_2_G09.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_2_G09_A021 5', mRNA sequence
Length = 720
Score = 40.1 bits (20), Expect = 0.34
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1166 agggttatgggatgacagag 1185
||||||||||||||||||||
Sbjct: 137 agggttatgggatgacagag 156
>gb|CF394651.1|CF394651 RTDS2_6_F08.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_6_F08_A021 5', mRNA sequence
Length = 793
Score = 40.1 bits (20), Expect = 0.34
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1166 agggttatgggatgacagag 1185
||||||||||||||||||||
Sbjct: 55 agggttatgggatgacagag 74
>gb|CF398551.1|CF398551 RTDS3_15_H06.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_15_H06_A022 5', mRNA sequence
Length = 629
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 224 tcgggcagggctacggcatgacagaagcaggcccggtgct 263
>gb|CF402273.1|CF402273 RTWW1_19_G06.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_19_G06_A015 5', mRNA sequence
Length = 738
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 28 tcgggcagggctacggcatgacagaagcaggcccggtgct 67
>gb|CF671971.1|CF671971 RTCNT1_60_A12.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_60_A12_A029 5', mRNA sequence
Length = 730
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 507 tcgggcagggctacggcatgacagaagcaggcccggtgct 546
>gb|CO163929.1|CO163929 FLD1_44_E06.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_44_E06_A029 5', mRNA sequence
Length = 815
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 450 tcgggcagggctacggcatgacagaagcaggcccggtgct 489
>gb|CO166419.1|CO166419 FLD1_61_H04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_61_H04_A029 5', mRNA sequence
Length = 843
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 95 tcgggcagggctacggcatgacagaagcaggcccggtgct 134
>gb|CO200299.1|CO200299 GEO2_6_D03.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_6_D03_A032 5', mRNA sequence
Length = 810
Score = 40.1 bits (20), Expect = 0.34
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1166 agggttatgggatgacagag 1185
||||||||||||||||||||
Sbjct: 590 agggttatgggatgacagag 609
>gb|CO201703.1|CO201703 RTCNT2_7_C08.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_7_C08_A029 5', mRNA sequence
Length = 845
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 69 tcgggcagggctacggcatgacagaagcaggcccggtgct 108
>gb|CO361973.1|CO361973 NDL2_8_G01.b1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_8_G01_A029 3', mRNA sequence
Length = 779
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 130 tcgggcagggctacggcatgacagaagcaggcccggtgct 91
>gb|CX651159.1|CX651159 COLD1_50_B11.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_50_B11_A029 5', mRNA sequence
Length = 872
Score = 40.1 bits (20), Expect = 0.34
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1166 agggttatgggatgacagag 1185
||||||||||||||||||||
Sbjct: 136 agggttatgggatgacagag 155
>gb|DN452712.1|DN452712 EST948511 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIFL07 5' end, mRNA sequence
Length = 812
Score = 40.1 bits (20), Expect = 0.34
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcca 487
||||||||||||||||||||
Sbjct: 523 cgccgccgccaccacggcca 504
>gb|DR018039.1|DR018039 STRS1_20_D02.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_20_D02_A034 3', mRNA sequence
Length = 731
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 422 tcgggcagggctacggcatgacagaagcaggcccggtgct 383
>gb|DR019282.1|DR019282 STRS1_28_H10.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_28_H10_A034 5', mRNA sequence
Length = 791
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 185 tcgggcagggctacggcatgacagaagcaggcccggtgct 224
>gb|DR055128.1|DR055128 RTCA1_21_E12.g2_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_21_E12_A029 5', mRNA sequence
Length = 625
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 39 tcgggcagggctacggcatgacagaagcaggcccggtgct 78
>gb|DR071752.1|DR071752 RTDK1_21_H05.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_21_H05_A029 5', mRNA sequence
Length = 679
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 105 tcgggcagggctacggcatgacagaagcaggcccggtgct 144
>gb|DR092921.1|DR092921 STRR1_5_A01.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_5_A01_A033 3', mRNA sequence
Length = 858
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 27 tcgggcagggctacggcatgacagaagcaggcccggtgct 66
>gb|DR092999.1|DR092999 STRR1_5_A01.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_5_A01_A033 5', mRNA sequence
Length = 920
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 146 tcgggcagggctacggcatgacagaagcaggcccggtgct 185
>gb|DR096293.1|DR096293 STRR1_27_C01.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_27_C01_A033 3', mRNA sequence
Length = 818
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 246 tcgggcagggctacggcatgacagaagcaggcccggtgct 207
>gb|DR101554.1|DR101554 STRR1_74_D06.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_74_D06_A033 3', mRNA sequence
Length = 748
Score = 40.1 bits (20), Expect = 0.34
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1166 agggttatgggatgacagag 1185
||||||||||||||||||||
Sbjct: 528 agggttatgggatgacagag 509
>gb|DR102325.1|DR102325 STRR1_80_G02.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_80_G02_A033 3', mRNA sequence
Length = 724
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 240 tcgggcagggctacggcatgacagaagcaggcccggtgct 201
>gb|DR102707.1|DR102707 STRR1_83_E07.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_83_E07_A033 3', mRNA sequence
Length = 235
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 88 tcgggcagggctacggcatgacagaagcaggcccggtgct 49
>gb|DR116726.1|DR116726 RTMG1_2_A01.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_2_A01_A029 5', mRNA sequence
Length = 753
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 3 tcgggcaggggtacggcatgacagaagcaggcccggtgct 42
>gb|DR167575.1|DR167575 RTPHOS1_19_E04.g1_A029 Roots minus phosphorous Pinus taeda cDNA clone
RTPHOS1_19_E04_A029 5', mRNA sequence
Length = 870
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 678 tcgggcagggctacggcatgacagaagcaggcccggtgct 717
>gb|DR181865.1|DR181865 RTMNUT1_41_B04.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_41_B04_A029 5', mRNA sequence
Length = 808
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 719 tcgggcagggctacggcatgacagaagcaggcccggtgct 758
>gb|DR744549.1|DR744549 RTCU1_23_E12.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_23_E12_A029 3', mRNA sequence
Length = 799
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 37 tcgggcagggctacggcatgacagaagcaggcccggtgct 76
>gb|DR744616.1|DR744616 RTCU1_23_E12.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_23_E12_A029 5', mRNA sequence
Length = 760
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 328 tcgggcagggctacggcatgacagaagcaggcccggtgct 367
>gb|U12012.1|PTU12012 Pinus taeda PT4CL1 4-coumarate-CoA ligase enzyme mRNA, complete cds
Length = 1969
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 1128 tcgggcagggctacggcatgacagaagcaggcccggtgct 1167
>gb|U12013.1|PTU12013 Pinus taeda PT4CL2 4-coumarate-CoA ligase enzyme mRNA, complete cds
Length = 1972
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 1128 tcgggcagggctacggcatgacagaagcaggcccggtgct 1167
>dbj|BD224332.1| Materials and methods for the modification of plant lignin content
Length = 1961
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 1087 tcgggcagggctacggcatgacagaagcaggcccggtgct 1126
>dbj|BD224366.1| Materials and methods for the modification of plant lignin content
Length = 1960
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 1086 tcgggcagggctacggcatgacagaagcaggcccggtgct 1125
>dbj|BD272988.1| Materials and methods for the modification of isoprenoid content,
compostition and metabolism
Length = 1961
Score = 40.1 bits (20), Expect = 0.34
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 1160 tcggacagggttatgggatgacagaggcaggcccggtgct 1199
|||| ||||| || || |||||||| ||||||||||||||
Sbjct: 1087 tcgggcagggctacggcatgacagaagcaggcccggtgct 1126
>gb|BE451806.1|BE451806 NXCI_002_E01_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_002_E01 5' similar to Arabidopsis
thaliana sequence At2g21660 glycine-rich RNA binding
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 352
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 258 cgccgccgccaccacggcc 240
>gb|BE761948.1|BE761948 NXCI_075_B08_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_075_B08 5' similar to Arabidopsis
thaliana sequence At3g21240 putative 4-coumarate:CoA
ligase 2 see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 394
Score = 38.2 bits (19), Expect = 1.3
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1177 atgacagaggcaggcccggtgct 1199
|||||||| ||||||||||||||
Sbjct: 123 atgacagaagcaggcccggtgct 145
>gb|BF169555.1|BF169555 NXCI_124_B09_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_124_B09 5' similar to Arabidopsis
thaliana sequence At3g21240 putative 4-coumarate:CoA
ligase 2 see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 346
Score = 38.2 bits (19), Expect = 1.3
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1177 atgacagaggcaggcccggtgct 1199
|||||||| ||||||||||||||
Sbjct: 123 atgacagaagcaggcccggtgct 145
>gb|BF517486.1|BF517486 NXSI_022_F01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_022_F01 5' similar to Arabidopsis thaliana
sequence At2g21660 glycine-rich RNA binding protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 511
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 491 cgccgccgccaccacggcc 473
>gb|BF518354.1|BF518354 NXSI_038_D08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_038_D08 5' similar to Arabidopsis thaliana
sequence At4g39260 glycine-rich protein (clone AtGRP8)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 242
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 228 cgccgccgccaccacggcc 210
>gb|BG039261.1|BG039261 NXSI_097_A01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_097_A01 5' similar to Arabidopsis thaliana
sequence At2g21660 glycine-rich RNA binding protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 526
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 500 cgccgccgccaccacggcc 482
>gb|BG040511.1|BG040511 NXSI_112_A05_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_112_A05 5' similar to Arabidopsis thaliana
sequence At2g21660 glycine-rich RNA binding protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 531
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 499 cgccgccgccaccacggcc 481
>gb|BG040515.1|BG040515 NXSI_112_B02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_112_B02 5' similar to Arabidopsis thaliana
sequence At2g21660 glycine-rich RNA binding protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 537
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 512 cgccgccgccaccacggcc 494
>gb|BQ702347.1|BQ702347 NXSI_127_F06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_127_F06 5' similar to Arabidopsis thaliana
sequence At2g21660 glycine-rich RNA binding protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 518
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 498 cgccgccgccaccacggcc 480
>gb|CF387845.1|CF387845 RTDR1_18_H09.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_18_H09_A015 5', mRNA
sequence
Length = 528
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 455 cgccgccgccaccacggcc 437
>gb|CF390990.1|CF390990 RTDR3_3_G03.b1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_3_G03_A022 3', mRNA sequence
Length = 528
Score = 38.2 bits (19), Expect = 1.3
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 1739 cgccatccggcaagattttaaggaaggatctgaga 1773
|||| |||||||||||||| || |||||| |||||
Sbjct: 259 cgccgtccggcaagattttgagaaaggatttgaga 293
>gb|CF393438.1|CF393438 RTDR3_13_D03.b1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_13_D03_A022 3', mRNA
sequence
Length = 364
Score = 38.2 bits (19), Expect = 1.3
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 1739 cgccatccggcaagattttaaggaaggatctgaga 1773
|||| |||||||||||||| || |||||| |||||
Sbjct: 204 cgccgtccggcaagattttgagaaaggatttgaga 238
>gb|CF400491.1|CF400491 RTWW1_5_D06.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_5_D06_A015 5', mRNA sequence
Length = 731
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 508 cgccgccgccaccacggcc 490
>gb|CF402671.1|CF402671 RTWW1_22_B05.b1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_22_B05_A015 3', mRNA sequence
Length = 502
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 113 cgccgccgccaccacggcc 95
>gb|CF402757.1|CF402757 RTWW1_22_B05.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_22_B05_A015 5', mRNA sequence
Length = 689
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 485 cgccgccgccaccacggcc 467
>gb|CF475453.1|CF475453 RTWW2_12_E05.b1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_12_E05_A021 3', mRNA sequence
Length = 565
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 176 cgccgccgccaccacggcc 158
>gb|CF475506.1|CF475506 RTWW2_12_E05.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_12_E05_A021 5', mRNA sequence
Length = 712
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 489 cgccgccgccaccacggcc 471
>gb|CF478791.1|CF478791 RTWW3_15_E03.b1_A022 Well-watered loblolly pine roots WW3 Pinus taeda
cDNA clone RTWW3_15_E03_A022 3', mRNA sequence
Length = 494
Score = 38.2 bits (19), Expect = 1.3
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 1739 cgccatccggcaagattttaaggaaggatctgaga 1773
|||| |||||||||||||| || |||||| |||||
Sbjct: 203 cgccgtccggcaagattttgagaaaggatttgaga 237
>gb|CF669166.1|CF669166 RTCNT1_41_D01.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_41_D01_A029 3', mRNA sequence
Length = 705
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 233 cgccgccgccaccacggcc 215
>gb|CF669179.1|CF669179 RTCNT1_41_E02.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_41_E02_A029 3', mRNA sequence
Length = 551
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 162 cgccgccgccaccacggcc 144
>gb|CF669432.1|CF669432 RTCNT1_43_G10.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_43_G10_A029 3', mRNA sequence
Length = 556
Score = 38.2 bits (19), Expect = 1.3
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 1739 cgccatccggcaagattttaaggaaggatctgaga 1773
|||| |||||||||||||| || |||||| |||||
Sbjct: 261 cgccgtccggcaagattttgagaaaggatttgaga 295
>gb|CN783871.1|CN783871 EST782562 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAE29 5' end, mRNA sequence
Length = 778
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 512 cgccgccgccaccacggcc 494
>gb|CN783961.1|CN783961 EST782652 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAF49 5' end, mRNA sequence
Length = 808
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 491 cgccgccgccaccacggcc 473
>gb|CN784626.1|CN784626 EST783317 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAO40 5' end, mRNA sequence
Length = 828
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 521 cgccgccgccaccacggcc 503
>gb|CN785153.1|CN785153 EST783844 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAV27 5' end, mRNA sequence
Length = 874
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 520 cgccgccgccaccacggcc 502
>gb|CN785816.1|CN785816 EST784507 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAB386 5' end, mRNA sequence
Length = 823
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 434 cgccgccgccaccacggcc 416
>gb|CO157883.1|CO157883 FLD1_2_G04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_2_G04_A029 5', mRNA sequence
Length = 735
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 352 cgccgccgccaccacggcc 370
>gb|CO158707.1|CO158707 FLD1_8_E07.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_8_E07_A029 5', mRNA sequence
Length = 568
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 360 cgccgccgccaccacggcc 378
>gb|CO159671.1|CO159671 FLD1_15_B11.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_15_B11_A029 3', mRNA sequence
Length = 703
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 331 cgccgccgccaccacggcc 313
>gb|CO159966.1|CO159966 FLD1_17_G04.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_17_G04_A029 3', mRNA sequence
Length = 770
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 381 cgccgccgccaccacggcc 363
>gb|CO161341.1|CO161341 FLD1_28_E04.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_28_E04_A029 3', mRNA sequence
Length = 794
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 405 cgccgccgccaccacggcc 387
>gb|CO161602.1|CO161602 FLD1_30_A10.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_30_A10_A029 3', mRNA sequence
Length = 744
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 355 cgccgccgccaccacggcc 337
>gb|CO162074.1|CO162074 FLD1_33_C05.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_33_C05_A029 3', mRNA sequence
Length = 776
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 389 cgccgccgccaccacggcc 371
>gb|CO163221.1|CO163221 FLD1_40_F03.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_40_F03_A029 3', mRNA sequence
Length = 804
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 409 cgccgccgccaccacggcc 391
>gb|CO163305.1|CO163305 FLD1_40_F03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_40_F03_A029 5', mRNA sequence
Length = 715
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 486 cgccgccgccaccacggcc 468
>gb|CO163529.1|CO163529 FLD1_42_E08.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_42_E08_A029 3', mRNA sequence
Length = 527
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 43 cgccgccgccaccacggcc 61
>gb|CO163612.1|CO163612 FLD1_42_E08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_42_E08_A029 5', mRNA sequence
Length = 870
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 358 cgccgccgccaccacggcc 376
>gb|CO163724.1|CO163724 FLD1_43_H07.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_43_H07_A029 3', mRNA sequence
Length = 818
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 429 cgccgccgccaccacggcc 411
>gb|CO164307.1|CO164307 FLD1_47_D11.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_47_D11_A029 3', mRNA sequence
Length = 796
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 341 cgccgccgccaccacggcc 359
>gb|CO164379.1|CO164379 FLD1_47_D11.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_47_D11_A029 5', mRNA sequence
Length = 819
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 358 cgccgccgccaccacggcc 376
>gb|CO165679.1|CO165679 FLD1_56_F06.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_56_F06_A029 3', mRNA sequence
Length = 812
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 289 cgccgccgccaccacggcc 307
>gb|CO165748.1|CO165748 FLD1_56_F06.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_56_F06_A029 5', mRNA sequence
Length = 783
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 394 cgccgccgccaccacggcc 412
>gb|CO201630.1|CO201630 RTCNT2_7_C08.b1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_7_C08_A029 3', mRNA sequence
Length = 852
Score = 38.2 bits (19), Expect = 1.3
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1177 atgacagaggcaggcccggtgct 1199
|||||||| ||||||||||||||
Sbjct: 6 atgacagaagcaggcccggtgct 28
>gb|CO410191.1|CO410191 EST840576 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAKZ86 5' end, mRNA sequence
Length = 850
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 490 cgccgccgccaccacggcc 472
>gb|CO411964.1|CO411964 EST842349 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIALR15 5' end, mRNA sequence
Length = 825
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 518 cgccgccgccaccacggcc 500
>gb|CO413076.1|CO413076 EST843461 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAM581 5' end, mRNA sequence
Length = 632
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 518 cgccgccgccaccacggcc 500
>gb|CO413545.1|CO413545 EST843930 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAMC29 5' end, mRNA sequence
Length = 881
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 509 cgccgccgccaccacggcc 491
>gb|CO362878.1|CO362878 RTK1_6_G05.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_6_G05_A029 3', mRNA sequence
Length = 717
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 361 cgccgccgccaccacggcc 343
>gb|CO362963.1|CO362963 RTK1_6_G05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_6_G05_A029 5', mRNA sequence
Length = 676
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 472 cgccgccgccaccacggcc 454
>gb|CO364377.1|CO364377 RTK1_15_H04.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_15_H04_A029 3', mRNA sequence
Length = 877
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 464 cgccgccgccaccacggcc 446
>gb|CV034323.1|CV034323 RTNACL1_40_D07.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_40_D07_A029 3', mRNA sequence
Length = 670
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 218 cgccgccgccaccacggcc 236
>gb|CV034392.1|CV034392 RTNACL1_40_D07.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_40_D07_A029 5', mRNA sequence
Length = 743
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 359 cgccgccgccaccacggcc 377
>gb|CV134425.1|CV134425 EST845634 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIATD08 5' end, mRNA sequence
Length = 613
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 333 cgccgccgccaccacggcc 351
>gb|CV136377.1|CV136377 EST847586 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIAA74 5' end, mRNA sequence
Length = 861
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 500 cgccgccgccaccacggcc 482
>gb|CV136381.1|CV136381 EST847590 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIAA80 5' end, mRNA sequence
Length = 487
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 229 cgccgccgccaccacggcc 211
>gb|CV137146.1|CV137146 EST848355 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIAK72 5' end, mRNA sequence
Length = 716
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 518 cgccgccgccaccacggcc 500
>gb|CV137768.1|CV137768 EST848977 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIAU35 5' end, mRNA sequence
Length = 853
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 513 cgccgccgccaccacggcc 495
>gb|CV137969.1|CV137969 EST849178 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIAX02 5' end, mRNA sequence
Length = 886
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 518 cgccgccgccaccacggcc 500
>gb|CV138287.1|CV138287 EST849496 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIB125 5' end, mRNA sequence
Length = 883
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 512 cgccgccgccaccacggcc 494
>gb|CV138491.1|CV138491 EST849700 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIB374 5' end, mRNA sequence
Length = 674
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 302 cgccgccgccaccacggcc 284
>gb|CV139156.1|CV139156 EST850365 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBC43 5' end, mRNA sequence
Length = 703
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 333 cgccgccgccaccacggcc 315
>gb|CV143548.1|CV143548 EST854757 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPICU41 5' end, mRNA sequence
Length = 867
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 520 cgccgccgccaccacggcc 502
>gb|CV144016.1|CV144016 EST855225 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPID027 5' end, mRNA sequence
Length = 737
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 520 cgccgccgccaccacggcc 502
>gb|CV146154.1|CV146154 EST857363 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIDT20 5' end, mRNA sequence
Length = 862
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 490 cgccgccgccaccacggcc 472
>gb|CV146605.1|CV146605 EST857814 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIDY28 5' end, mRNA sequence
Length = 865
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 522 cgccgccgccaccacggcc 504
>gb|CV146798.1|CV146798 EST858007 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIE042 5' end, mRNA sequence
Length = 869
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 497 cgccgccgccaccacggcc 479
>gb|CV147398.1|CV147398 EST858607 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIE684 5' end, mRNA sequence
Length = 878
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 507 cgccgccgccaccacggcc 489
>gb|CV147667.1|CV147667 EST858876 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIE972 5' end, mRNA sequence
Length = 487
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 98 cgccgccgccaccacggcc 80
>gb|CV147747.1|CV147747 EST858956 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIEA66 5' end, mRNA sequence
Length = 619
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 272 cgccgccgccaccacggcc 254
>gb|CV147784.1|CV147784 EST858993 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIEB07 5' end, mRNA sequence
Length = 908
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 513 cgccgccgccaccacggcc 495
>gb|CV148583.1|CV148583 EST859792 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIEJ71 5' end, mRNA sequence
Length = 901
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 513 cgccgccgccaccacggcc 495
>gb|CX647811.1|CX647811 COLD1_20_G12.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_20_G12_A029 3', mRNA sequence
Length = 745
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 376 cgccgccgccaccacggcc 358
>gb|CX714585.1|CX714585 RTPQ1_23_E02.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_23_E02_A032 5', mRNA sequence
Length = 523
Score = 38.2 bits (19), Expect = 1.3
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1177 atgacagaggcaggcccggtgct 1199
|||||||| ||||||||||||||
Sbjct: 28 atgacagaagcaggcccggtgct 50
>gb|DN446749.1|DN446749 EST942548 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBL16 5' end, mRNA sequence
Length = 731
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 509 cgccgccgccaccacggcc 491
>gb|DN447358.1|DN447358 EST943157 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBS05 5' end, mRNA sequence
Length = 602
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 520 cgccgccgccaccacggcc 502
>gb|DN447740.1|DN447740 EST943539 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBW61 5' end, mRNA sequence
Length = 787
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 518 cgccgccgccaccacggcc 500
>gb|DN447985.1|DN447985 EST943784 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIBZ67 5' end, mRNA sequence
Length = 745
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 509 cgccgccgccaccacggcc 491
>gb|DN448186.1|DN448186 EST943985 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIC192 5' end, mRNA sequence
Length = 746
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 324 cgccgccgccaccacggcc 306
>gb|DN449228.1|DN449228 EST945027 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPICF17 5' end, mRNA sequence
Length = 802
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 509 cgccgccgccaccacggcc 491
>gb|DN449444.1|DN449444 EST945243 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPICH81 5' end, mRNA sequence
Length = 738
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 393 cgccgccgccaccacggcc 375
>gb|DN450507.1|DN450507 EST946306 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIEQ53 5' end, mRNA sequence
Length = 802
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 509 cgccgccgccaccacggcc 491
>gb|DN451592.1|DN451592 EST947391 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIF558 5' end, mRNA sequence
Length = 894
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 613 cgccgccgccaccacggcc 595
>gb|DN452512.1|DN452512 EST948311 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIFI89 5' end, mRNA sequence
Length = 849
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 519 cgccgccgccaccacggcc 501
>gb|DN454185.1|DN454185 EST949984 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIG087 5' end, mRNA sequence
Length = 783
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 411 cgccgccgccaccacggcc 393
>gb|DN454663.1|DN454663 EST950462 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIG601 5' end, mRNA sequence
Length = 869
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 497 cgccgccgccaccacggcc 479
>gb|DN454874.1|DN454874 EST950673 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIG825 5' end, mRNA sequence
Length = 692
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 509 cgccgccgccaccacggcc 491
>gb|DN454882.1|DN454882 EST950681 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIG833 5' end, mRNA sequence
Length = 675
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 303 cgccgccgccaccacggcc 285
>gb|DN455315.1|DN455315 EST951114 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGC92 5' end, mRNA sequence
Length = 820
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 485 cgccgccgccaccacggcc 467
>gb|DN456672.1|DN456672 EST952471 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGR57 5' end, mRNA sequence
Length = 800
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 511 cgccgccgccaccacggcc 493
>gb|DN456971.1|DN456971 EST952770 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGU77 5' end, mRNA sequence
Length = 626
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 254 cgccgccgccaccacggcc 236
>gb|DN458059.1|DN458059 EST953858 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIH739 5' end, mRNA sequence
Length = 759
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 521 cgccgccgccaccacggcc 503
>gb|DN458174.1|DN458174 EST953973 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIH886 5' end, mRNA sequence
Length = 709
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 556 cgccgccgccaccacggcc 538
>gb|DN459049.1|DN459049 EST954848 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIHI74 5' end, mRNA sequence
Length = 838
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 475 cgccgccgccaccacggcc 457
>gb|DN460714.1|DN460714 EST956513 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPII169 5' end, mRNA sequence
Length = 854
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 786 cgccgccgccaccacggcc 768
>gb|DN464100.1|DN464100 EST959899 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIJ728 5' end, mRNA sequence
Length = 748
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 512 cgccgccgccaccacggcc 494
>gb|DN464945.1|DN464945 EST960744 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIJI72 5' end, mRNA sequence
Length = 838
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 446 cgccgccgccaccacggcc 428
>gb|DN465112.1|DN465112 EST960911 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIJL12 5' end, mRNA sequence
Length = 868
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 521 cgccgccgccaccacggcc 503
>gb|DR011385.1|DR011385 HEAT1_5_H10.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_5_H10_A029 3', mRNA sequence
Length = 794
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 405 cgccgccgccaccacggcc 387
>gb|DR011468.1|DR011468 HEAT1_5_H10.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_5_H10_A029 5', mRNA sequence
Length = 715
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 486 cgccgccgccaccacggcc 468
>gb|DR011475.1|DR011475 HEAT1_6_A06.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_6_A06_A029 3', mRNA sequence
Length = 797
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 392 cgccgccgccaccacggcc 374
>gb|DR011552.1|DR011552 HEAT1_6_A06.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_6_A06_A029 5', mRNA sequence
Length = 738
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 398 cgccgccgccaccacggcc 380
>gb|DR012113.1|DR012113 HEAT1_10_F12.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_10_F12_A029 3', mRNA sequence
Length = 437
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 57 cgccgccgccaccacggcc 39
>gb|DR012707.1|DR012707 HEAT1_14_B11.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_14_B11_A029 5', mRNA sequence
Length = 734
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 350 cgccgccgccaccacggcc 368
>gb|DR012713.1|DR012713 HEAT1_14_C05.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_14_C05_A029 5', mRNA sequence
Length = 523
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 479 cgccgccgccaccacggcc 461
>gb|DR012797.1|DR012797 HEAT1_15_C09.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_15_C09_A029 3', mRNA sequence
Length = 803
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 434 cgccgccgccaccacggcc 416
>gb|DR014079.1|DR014079 HEAT1_23_F08.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_23_F08_A029 3', mRNA sequence
Length = 583
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 211 cgccgccgccaccacggcc 193
>gb|DR017117.1|DR017117 STRS1_14_E01.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_14_E01_A034 3', mRNA sequence
Length = 740
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 351 cgccgccgccaccacggcc 333
>gb|DR017270.1|DR017270 STRS1_15_E04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_15_E04_A034 3', mRNA sequence
Length = 785
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 397 cgccgccgccaccacggcc 379
>gb|DR017344.1|DR017344 STRS1_15_E04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_15_E04_A034 5', mRNA sequence
Length = 570
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 488 cgccgccgccaccacggcc 470
>gb|DR017448.1|DR017448 STRS1_16_H02.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_16_H02_A034 3', mRNA sequence
Length = 784
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 395 cgccgccgccaccacggcc 377
>gb|DR017489.1|DR017489 STRS1_16_D04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_16_D04_A034 5', mRNA sequence
Length = 606
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 481 cgccgccgccaccacggcc 463
>gb|DR019194.1|DR019194 STRS1_28_H10.b2_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_28_H10_A034 3', mRNA sequence
Length = 836
Score = 38.2 bits (19), Expect = 1.3
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1177 atgacagaggcaggcccggtgct 1199
|||||||| ||||||||||||||
Sbjct: 16 atgacagaagcaggcccggtgct 38
>gb|DR022016.1|DR022016 STRS1_48_G07.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_48_G07_A034 3', mRNA sequence
Length = 794
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 407 cgccgccgccaccacggcc 389
>gb|DR022096.1|DR022096 STRS1_48_G07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_48_G07_A034 5', mRNA sequence
Length = 533
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 488 cgccgccgccaccacggcc 470
>gb|DR023489.1|DR023489 STRS1_58_B10.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_58_B10_A034 3', mRNA sequence
Length = 625
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 141 cgccgccgccaccacggcc 123
>gb|DR049100.1|DR049100 RTBOR1_13_H01.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_13_H01_A029 3', mRNA sequence
Length = 608
Score = 38.2 bits (19), Expect = 1.3
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 1739 cgccatccggcaagattttaaggaaggatctgaga 1773
|||| |||||||||||||| || |||||| |||||
Sbjct: 318 cgccgtccggcaagattttgagaaaggatttgaga 352
>gb|DR049567.1|DR049567 RTBOR1_17_C03.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_17_C03_A029 5', mRNA sequence
Length = 722
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 398 cgccgccgccaccacggcc 416
>gb|DR050029.1|DR050029 RTBOR1_20_G08.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_20_G08_A029 5', mRNA sequence
Length = 517
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 388 cgccgccgccaccacggcc 406
>gb|DR050534.1|DR050534 RTBOR1_24_D07.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_24_D07_A029 3', mRNA sequence
Length = 788
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 228 cgccgccgccaccacggcc 246
>gb|DR050615.1|DR050615 RTBOR1_24_D07.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_24_D07_A029 5', mRNA sequence
Length = 739
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 379 cgccgccgccaccacggcc 397
>gb|DR050832.1|DR050832 RTBOR1_26_A04.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_26_A04_A029 3', mRNA sequence
Length = 744
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 274 cgccgccgccaccacggcc 256
>gb|DR050907.1|DR050907 RTBOR1_26_A04.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_26_A04_A029 5', mRNA sequence
Length = 729
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 509 cgccgccgccaccacggcc 491
>gb|DR051447.1|DR051447 RTBOR1_30_D09.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_30_D09_A029 3', mRNA sequence
Length = 627
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 96 cgccgccgccaccacggcc 114
>gb|DR051890.1|DR051890 RTCA1_1_C10.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_1_C10_A029 3', mRNA sequence
Length = 815
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 352 cgccgccgccaccacggcc 334
>gb|DR053566.1|DR053566 RTCA1_12_A09.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_12_A09_A029 3', mRNA sequence
Length = 705
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 317 cgccgccgccaccacggcc 299
>gb|DR054023.1|DR054023 RTCA1_14_F07.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_14_F07_A029 5', mRNA sequence
Length = 750
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 353 cgccgccgccaccacggcc 371
>gb|DR055335.1|DR055335 RTCA1_23_B12.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_23_B12_A029 3', mRNA sequence
Length = 720
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 331 cgccgccgccaccacggcc 313
>gb|DR055410.1|DR055410 RTCA1_23_B12.g2_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_23_B12_A029 5', mRNA sequence
Length = 497
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 407 cgccgccgccaccacggcc 425
>gb|DR055704.1|DR055704 RTCA1_25_H05.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_25_H05_A029 3', mRNA sequence
Length = 583
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 211 cgccgccgccaccacggcc 193
>gb|DR055784.1|DR055784 RTCA1_25_H05.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_25_H05_A029 5', mRNA sequence
Length = 308
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 258 cgccgccgccaccacggcc 240
>gb|DR058335.1|DR058335 RTNIT1_11_E07.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_11_E07_A029 3', mRNA sequence
Length = 506
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 128 cgccgccgccaccacggcc 110
>gb|DR058422.1|DR058422 RTNIT1_11_E07.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_11_E07_A029 5', mRNA sequence
Length = 507
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 487 cgccgccgccaccacggcc 469
>gb|DR058707.1|DR058707 RTNIT1_13_A01.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_13_A01_A029 5', mRNA sequence
Length = 627
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1123 caggacctgctgcgcgcca 1141
|||||||||||||||||||
Sbjct: 211 caggacctgctgcgcgcca 193
>gb|DR059597.1|DR059597 RTNIT1_18_D06.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_18_D06_A029 5', mRNA sequence
Length = 761
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 351 cgccgccgccaccacggcc 369
>gb|DR069800.1|DR069800 RTDK1_9_B09.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_9_B09_A029 5', mRNA sequence
Length = 854
Score = 38.2 bits (19), Expect = 1.3
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1177 atgacagaggcaggcccggtgct 1199
|||||||| ||||||||||||||
Sbjct: 4 atgacagaagcaggcccggtgct 26
>gb|DR070267.1|DR070267 RTDK1_12_F12.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_12_F12_A029 3', mRNA sequence
Length = 790
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 401 cgccgccgccaccacggcc 383
>gb|DR070354.1|DR070354 RTDK1_12_F12.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_12_F12_A029 5', mRNA sequence
Length = 553
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 486 cgccgccgccaccacggcc 468
>gb|DR079816.1|DR079816 RTFEPL1_18_A02.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_18_A02_A029 3', mRNA sequence
Length = 564
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 194 cgccgccgccaccacggcc 176
>gb|DR080079.1|DR080079 RTFEPL1_20_C07.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_20_C07_A029 3', mRNA sequence
Length = 736
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 356 cgccgccgccaccacggcc 338
>gb|DR088368.1|DR088368 RTAL1_1_E10.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_1_E10_A029 3', mRNA sequence
Length = 490
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 118 cgccgccgccaccacggcc 100
>gb|DR088435.1|DR088435 RTAL1_1_E10.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_1_E10_A029 5', mRNA sequence
Length = 554
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 498 cgccgccgccaccacggcc 480
>gb|DR099297.1|DR099297 STRR1_54_C03.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_54_C03_A033 5', mRNA sequence
Length = 622
Score = 38.2 bits (19), Expect = 1.3
Identities = 58/71 (81%)
Strand = Plus / Plus
Query: 1177 atgacagaggcaggcccggtgctctcgatgtgcatggcgtttgccaaggagccgttaccg 1236
|||||||||||||| || ||||| || ||||| |||| || || |||||||| || |||
Sbjct: 331 atgacagaggcaggacctgtgctatcaatgtgtctggccttcgctaaggagccctttccg 390
Query: 1237 gtgaagtccgg 1247
|||||||||
Sbjct: 391 acgaagtccgg 401
>gb|DR100567.1|DR100567 STRR1_65_D03.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_65_D03_A033 3', mRNA sequence
Length = 653
Score = 38.2 bits (19), Expect = 1.3
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 1739 cgccatccggcaagattttaaggaaggatctgaga 1773
|||| |||||||||||||| || |||||| |||||
Sbjct: 385 cgccgtccggcaagattttgagaaaggatttgaga 419
>gb|DR101627.1|DR101627 STRR1_74_E01.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_74_E01_A033 5', mRNA sequence
Length = 603
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 501 cgccgccgccaccacggcc 519
>gb|DR118856.1|DR118856 RTMG1_19_D04.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_19_D04_A029 5', mRNA sequence
Length = 699
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 369 cgccgccgccaccacggcc 387
>gb|DR160847.1|DR160847 RTFE1_8_H09.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_8_H09_A029 3', mRNA sequence
Length = 799
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 401 cgccgccgccaccacggcc 383
>gb|DR160941.1|DR160941 RTFE1_8_H09.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_8_H09_A029 5', mRNA sequence
Length = 826
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 486 cgccgccgccaccacggcc 468
>gb|DR161409.1|DR161409 RTFE1_11_D06.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_11_D06_A029 5', mRNA sequence
Length = 603
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 488 cgccgccgccaccacggcc 470
>gb|DR163927.1|DR163927 RTFE1_45_F10.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_45_F10_A029 5', mRNA sequence
Length = 760
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 489 cgccgccgccaccacggcc 471
>gb|DR164029.1|DR164029 RTFE1_46_H11.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_46_H11_A029 3', mRNA sequence
Length = 787
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 400 cgccgccgccaccacggcc 382
>gb|DR164119.1|DR164119 RTFE1_46_H11.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_46_H11_A029 5', mRNA sequence
Length = 767
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 490 cgccgccgccaccacggcc 472
>gb|DR164143.1|DR164143 RTFE1_47_C07.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_47_C07_A029 3', mRNA sequence
Length = 836
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 466 cgccgccgccaccacggcc 448
>gb|DR164218.1|DR164218 RTFE1_47_C07.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_47_C07_A029 5', mRNA sequence
Length = 769
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 492 cgccgccgccaccacggcc 474
>gb|DR168466.1|DR168466 RTPHOS1_25_D09.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_25_D09_A029 5', mRNA sequence
Length = 612
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 378 cgccgccgccaccacggcc 396
>gb|DR181460.1|DR181460 RTMNUT1_39_C05.b2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_39_C05_A029 3', mRNA sequence
Length = 562
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 48 cgccgccgccaccacggcc 66
>gb|DR181546.1|DR181546 RTMNUT1_39_C05.g2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_39_C05_A029 5', mRNA sequence
Length = 612
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 474 cgccgccgccaccacggcc 492
>gb|DR384267.1|DR384267 RTHG1_1_D08.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_1_D08_A029 3', mRNA sequence
Length = 830
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 464 cgccgccgccaccacggcc 446
>gb|DR384562.1|DR384562 RTHG1_3_C02.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_3_C02_A029 3', mRNA sequence
Length = 636
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 222 cgccgccgccaccacggcc 204
>gb|DR387041.1|DR387041 RTHG1_19_B09.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_19_B09_A029 3', mRNA sequence
Length = 674
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 387 cgccgccgccaccacggcc 405
>gb|DR387109.1|DR387109 RTHG1_19_B09.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_19_B09_A029 5', mRNA sequence
Length = 635
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 356 cgccgccgccaccacggcc 374
>gb|DR388551.1|DR388551 RTHG1_29_A06.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_29_A06_A029 3', mRNA sequence
Length = 550
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 508 cgccgccgccaccacggcc 490
>gb|DR742014.1|DR742014 RTCU1_1_D12.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_1_D12_A029 3', mRNA sequence
Length = 674
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 389 cgccgccgccaccacggcc 407
>gb|DR742091.1|DR742091 RTCU1_1_D12.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_1_D12_A029 5', mRNA sequence
Length = 658
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 374 cgccgccgccaccacggcc 392
>gb|DR744092.1|DR744092 RTCU1_20_E01.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_20_E01_A029 3', mRNA sequence
Length = 769
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 354 cgccgccgccaccacggcc 336
>gb|DR744562.1|DR744562 RTCU1_23_G04.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_23_G04_A029 3', mRNA sequence
Length = 810
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 408 cgccgccgccaccacggcc 390
>gb|DR744632.1|DR744632 RTCU1_23_G04.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_23_G04_A029 5', mRNA sequence
Length = 562
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 491 cgccgccgccaccacggcc 473
>gb|DR746019.1|DR746019 RTCU1_34_D11.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_34_D11_A029 3', mRNA sequence
Length = 567
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 208 cgccgccgccaccacggcc 190
>gb|DR746197.1|DR746197 RTCU1_35_H01.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_35_H01_A029 3', mRNA sequence
Length = 610
Score = 38.2 bits (19), Expect = 1.3
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 468 cgccgccgccaccacggcc 486
|||||||||||||||||||
Sbjct: 219 cgccgccgccaccacggcc 201
Database: Pinus_nucl_with_EST.fasta
Posted date: May 2, 2006 3:25 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 176,310
Number of Sequences: 355925
Number of extensions: 176310
Number of successful extensions: 47164
Number of sequences better than 10.0: 267
Number of HSP's better than 10.0 without gapping: 267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46647
Number of HSP's gapped (non-prelim): 515
length of query: 1986
length of database: 217,277,237
effective HSP length: 20
effective length of query: 1966
effective length of database: 210,158,737
effective search space: 413172076942
effective search space used: 413172076942
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)