BLASTN 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3696569.2.1
         (1022 letters)

Database: Pinus_nucl_with_EST.fasta 
           355,925 sequences; 217,277,237 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CF476071.1|CF476071  RTWW2_16_D03.g1_A021 Well-watered lo...    68   8e-010
gb|CF479898.1|CF479898  RTWW3_12_H04.g1_A022 Well-watered lo...    68   8e-010
gb|CO197872.1|CO197872  GEO1_9_E12.g1_A029 Root gravitropism...    68   8e-010
gb|CX649869.1|CX649869  COLD1_42_B01.b1_A029 Root cold Pinus...    68   8e-010
gb|CX649938.1|CX649938  COLD1_42_B01.g1_A029 Root cold Pinus...    68   8e-010
gb|DR070227.1|DR070227  RTDK1_12_C03.b1_A029 Roots, dark Pin...    68   8e-010
gb|DR181356.1|DR181356  RTMNUT1_38_A01.g2_A029 Roots minus m...    68   8e-010
gb|U64890.1|PTU64890  Pinus taeda expansin mRNA, partial cds       68   8e-010
gb|U64891.1|PTU64891  Pinus taeda expansin mRNA, partial cds       68   8e-010
gb|U64893.1|PTU64893  Pinus taeda expansin mRNA, partial cds       68   8e-010
gb|AF085330.1|AF085330  Pinus taeda expansin mRNA, complete cds    68   8e-010
gb|U64892.1|PTU64892  Pinus taeda expansin mRNA, partial cds       68   8e-010
gb|CF391855.1|CF391855  RTDR3_10_C05.g1_A022 Loblolly pine r...    66   3e-009
gb|CN784348.1|CN784348  EST783039 Sequencing ESTs from loblo...    66   3e-009
gb|CX650764.1|CX650764  COLD1_48_A05.b1_A029 Root cold Pinus...    66   3e-009
gb|DR688987.1|DR688987  EST1079073 Normalized pine embryo li...    66   3e-009
gb|DR692635.1|DR692635  EST1082723 Normalized pine embryo li...    66   3e-009
gb|DT625757.1|DT625757  EST1157681 Sequencing ESTs from lobl...    66   3e-009
gb|DR070312.1|DR070312  RTDK1_12_C03.g1_A029 Roots, dark Pin...    64   1e-008
gb|DR097316.1|DR097316  STRR1_33_H05.g3_A033 Stem Response R...    64   1e-008
gb|CO368672.1|CO368672  RTK1_42_C07.b1_A029 Roots minus pota...    62   5e-008
gb|CO368748.1|CO368748  RTK1_42_C07.g1_A029 Roots minus pota...    62   5e-008
gb|DT624311.1|DT624311  EST1158586 Sequencing ESTs from lobl...    62   5e-008
gb|BG039378.1|BG039378  NXSI_098_D11_F NXSI (Nsf Xylem Side ...    58   7e-007
gb|CF399941.1|CF399941  RTWW1_2_C11.b1_A015 Well-watered lob...    58   7e-007
gb|CF400653.1|CF400653  RTWW1_6_A01.g1_A015 Well-watered lob...    58   7e-007
gb|CF475910.1|CF475910  RTWW2_15_D07.g1_A021 Well-watered lo...    58   7e-007
gb|CO172418.1|CO172418  NDL1_29_D02.g1_A029 Needles control ...    58   7e-007
gb|CX650634.1|CX650634  COLD1_47_B12.b1_A029 Root cold Pinus...    58   7e-007
gb|CX650703.1|CX650703  COLD1_47_B12.g1_A029 Root cold Pinus...    58   7e-007
gb|DR055360.1|DR055360  RTCA1_23_E11.b1_A029 Roots minus cal...    58   7e-007
gb|DR055518.1|DR055518  RTCA1_24_E10.b1_A029 Roots minus cal...    58   7e-007
gb|DR070635.1|DR070635  RTDK1_14_D09.g1_A029 Roots, dark Pin...    58   7e-007
gb|DR692432.1|DR692432  EST1082520 Normalized pine embryo li...    58   7e-007
gb|DR011201.1|DR011201  HEAT1_4_E06.b1_A029 Root at 37 C for...    56   3e-006
gb|DR047687.1|DR047687  RTBOR1_2_F07.g1_A029 Roots plus adde...    56   3e-006
gb|DR120161.1|DR120161  RTMG1_27_H07.g2_A029 Roots minus mag...    56   3e-006
gb|DR180723.1|DR180723  RTMNUT1_34_A06.g1_A029 Roots minus m...    56   3e-006
gb|CF400025.1|CF400025  RTWW1_2_C11.g1_A015 Well-watered lob...    54   1e-005
gb|CF663902.1|CF663902  RTCNT1_5_H12.g1_A029 Root control Pi...    54   1e-005
gb|CF666895.1|CF666895  RTCNT1_26_G11.g1_A029 Root control P...    54   1e-005
gb|CO171305.1|CO171305  NDL1_20_C09.g1_A029 Needles control ...    54   1e-005
gb|CO369598.1|CO369598  RTK1_48_F01.b1_A029 Roots minus pota...    54   1e-005
gb|CO369680.1|CO369680  RTK1_48_F01.g1_A029 Roots minus pota...    54   1e-005
gb|CV035793.1|CV035793  RTNACL1_42_B01.g1_A029 Roots plus ad...    54   1e-005
gb|CV144435.1|CV144435  EST855644 Sequencing ESTs from loblo...    54   1e-005
gb|DR071171.1|DR071171  RTDK1_18_C12.b1_A029 Roots, dark Pin...    54   1e-005
gb|DT624714.1|DT624714  EST1159049 Sequencing ESTs from lobl...    54   1e-005
gb|CF477384.1|CF477384  RTWW3_7_A01.g1_A022 Well-watered lob...    52   5e-005
gb|CO361349.1|CO361349  NDL2_4_G08.b1_A029 Needles control 2...    52   5e-005
gb|CO361435.1|CO361435  NDL2_4_G08.g1_A029 Needles control 2...    52   5e-005
gb|CO367410.1|CO367410  RTK1_34_D03.b1_A029 Roots minus pota...    52   5e-005
gb|CO367487.1|CO367487  RTK1_34_D03.g1_A029 Roots minus pota...    52   5e-005
gb|CX648594.1|CX648594  COLD1_29_D11.g1_A029 Root cold Pinus...    52   5e-005
gb|CX648930.1|CX648930  COLD1_31_H02.g1_A029 Root cold Pinus...    52   5e-005
gb|DR050231.1|DR050231  RTBOR1_22_D04.b1_A029 Roots plus add...    52   5e-005
gb|DR050310.1|DR050310  RTBOR1_22_D04.g1_A029 Roots plus add...    52   5e-005
gb|DR051762.1|DR051762  RTBOR1_32_E10.b1_A029 Roots plus add...    52   5e-005
gb|DR051834.1|DR051834  RTBOR1_32_E10.g1_A029 Roots plus add...    52   5e-005
gb|DR093671.1|DR093671  STRR1_9_E07.g1_A033 Stem Response Re...    52   5e-005
gb|DR163147.1|DR163147  RTFE1_41_E12.b1_A029 Roots minus iro...    52   5e-005
gb|DR163235.1|DR163235  RTFE1_41_E12.g1_A029 Roots minus iro...    52   5e-005
gb|DR163481.1|DR163481  RTFE1_43_D12.b1_A029 Roots minus iro...    52   5e-005
gb|DR163657.1|DR163657  RTFE1_44_D12.b1_A029 Roots minus iro...    52   5e-005
gb|DR163745.1|DR163745  RTFE1_44_D12.g1_A029 Roots minus iro...    52   5e-005
gb|DR165660.1|DR165660  RTPHOS1_6_B10.g1_A029 Roots minus ph...    52   5e-005
gb|DR168497.1|DR168497  RTPHOS1_25_G11.g1_A029 Roots minus p...    52   5e-005
gb|DR694543.1|DR694543  EST1084635 Normalized pine embryo li...    52   5e-005
gb|DR742067.1|DR742067  RTCU1_1_B09.g1_A029 Roots plus added...    52   5e-005
gb|DT639052.1|DT639052  EST1153983 Normalized pine embryo li...    52   5e-005
gb|AW290421.1|AW290421  NXNV020D02F Nsf Xylem Normal wood Ve...    50   2e-004
gb|BX251144.1|BX251144  BX251144 Pinus pinaster differenciat...    50   2e-004
gb|BX251561.1|BX251561  BX251561 Pinus pinaster differenciat...    50   2e-004
gb|BX251613.1|BX251613  BX251613 Pinus pinaster differenciat...    50   2e-004
gb|BX253271.1|BX253271  BX253271 Pinus pinaster differenciat...    50   2e-004
gb|BX254474.1|BX254474  BX254474 Pinus pinaster differenciat...    50   2e-004
gb|BE762031.1|BE762031  NXCI_076_B10_F NXCI (Nsf Xylem Compr...    50   2e-004
gb|CD027081.1|CD027081  NXNV020D02 Nsf Xylem Normal wood Ver...    50   2e-004
gb|CF386013.1|CF386013  RTDR1_7_F11.g1_A015 Loblolly pine ro...    50   2e-004
gb|CF391890.1|CF391890  RTDR3_10_G01.g1_A022 Loblolly pine r...    50   2e-004
gb|CF479851.1|CF479851  RTWW3_12_D07.g1_A022 Well-watered lo...    50   2e-004
gb|CF668487.1|CF668487  RTCNT1_36_F12.g1_A029 Root control P...    50   2e-004
gb|BX682844.1|BX682844  BX682844 Pinus pinaster differenciat...    50   2e-004
gb|CR393207.1|CR393207  CR393207 RN Pinus pinaster cDNA clon...    50   2e-004
gb|CR393417.1|CR393417  CR393417 RN Pinus pinaster cDNA clon...    50   2e-004
gb|CO166169.1|CO166169  FLD1_59_G05.g1_A029 Root flooded Pin...    50   2e-004
gb|CO200976.1|CO200976  RTCNT2_2_G03.g1_A029 Root control 2 ...    50   2e-004
gb|CO362158.1|CO362158  RTK1_1_E05.g1_A029 Roots minus potas...    50   2e-004
gb|CO362167.1|CO362167  RTK1_1_F05.g1_A029 Roots minus potas...    50   2e-004
gb|DR015281.1|DR015281  STRS1_2_C05.g1_A034 Shoot tip pitch ...    50   2e-004
gb|DR022663.1|DR022663  STRS1_52_D06.g1_A034 Shoot tip pitch...    50   2e-004
gb|DR023285.1|DR023285  STRS1_56_D02.g1_A034 Shoot tip pitch...    50   2e-004
gb|DR024833.1|DR024833  STRS1_67_F03.g1_A034 Shoot tip pitch...    50   2e-004
gb|DR051531.1|DR051531  RTBOR1_30_E09.g1_A029 Roots plus add...    50   2e-004
gb|DR055601.1|DR055601  RTCA1_24_E10.g2_A029 Roots minus cal...    50   2e-004
gb|DR070152.1|DR070152  RTDK1_11_D01.g1_A029 Roots, dark Pin...    50   2e-004
gb|DR080162.1|DR080162  RTFEPL1_20_E11.g1_A029 Roots plus ad...    50   2e-004
gb|DR093057.1|DR093057  STRR1_5_F06.g1_A033 Stem Response Re...    50   2e-004
gb|DR096273.1|DR096273  STRR1_26_H05.g1_A033 Stem Response R...    50   2e-004
gb|DR096352.1|DR096352  STRR1_27_A07.g1_A033 Stem Response R...    50   2e-004
gb|DR099166.1|DR099166  STRR1_53_C12.g1_A033 Stem Response R...    50   2e-004
gb|DR100480.1|DR100480  STRR1_64_A12.g1_A033 Stem Response R...    50   2e-004
gb|DR120128.1|DR120128  RTMG1_27_E05.g2_A029 Roots minus mag...    50   2e-004
gb|DR687528.1|DR687528  EST1077610 Normalized pine embryo li...    50   2e-004
gb|DR692513.1|DR692513  EST1082601 Normalized pine embryo li...    50   2e-004
gb|DR746394.1|DR746394  RTCU1_36_E04.g1_A029 Roots plus adde...    50   2e-004
gb|DT633920.1|DT633920  EST1148851 Normalized pine embryo li...    50   2e-004
gb|DT637181.1|DT637181  EST1152112 Normalized pine embryo li...    50   2e-004
gb|AA556812.1|AA556812  654 Loblolly pine C Pinus taeda cDNA...    48   7e-004
gb|AA556861.1|AA556861  703 Loblolly pine C Pinus taeda cDNA...    48   7e-004
gb|AW011524.1|AW011524  ST21H02 Pine TriplEx shoot tip libra...    48   7e-004
gb|BF049828.1|BF049828  NXCI_111_D09_F NXCI (Nsf Xylem Compr...    48   7e-004
gb|BF609490.1|BF609490  NXSI_043_C03_F NXSI (Nsf Xylem Side ...    48   7e-004
gb|BF609532.1|BF609532  NXSI_043_G01_F NXSI (Nsf Xylem Side ...    48   7e-004
gb|BF778581.1|BF778581  NXSI_088_D02_F NXSI (Nsf Xylem Side ...    48   7e-004
gb|CX646780.1|CX646780  COLD1_11_B06.g1_A029 Root cold Pinus...    48   7e-004
gb|CX649475.1|CX649475  COLD1_35_B04.g1_A029 Root cold Pinus...    48   7e-004
gb|CX652556.1|CX652556  COLD1_59_H02.g1_A029 Root cold Pinus...    48   7e-004
gb|CX713463.1|CX713463  RTPQ1_9_C04.g1_A032 Roots treated wi...    48   7e-004
gb|DR010784.1|DR010784  HEAT1_1_F12.b1_A029 Root at 37 C for...    48   7e-004
gb|DR010861.1|DR010861  HEAT1_1_F12.g1_A029 Root at 37 C for...    48   7e-004
gb|DR011619.1|DR011619  HEAT1_6_G09.g1_A029 Root at 37 C for...    48   7e-004
gb|DR055148.1|DR055148  RTCA1_21_G09.g2_A029 Roots minus cal...    48   7e-004
gb|DR056610.1|DR056610  RTCA1_31_A02.g1_A029 Roots minus cal...    48   7e-004
gb|DR070179.1|DR070179  RTDK1_11_F07.g1_A029 Roots, dark Pin...    48   7e-004
gb|DR072178.1|DR072178  RTDK1_24_C09.g1_A029 Roots, dark Pin...    48   7e-004
gb|DR089298.1|DR089298  RTAL1_7_G03.g1_A029 Roots plus added...    48   7e-004
gb|DR090373.1|DR090373  RTAL1_14_D02.g1_A029 Roots plus adde...    48   7e-004
gb|DR090533.1|DR090533  RTAL1_15_E12.g1_A029 Roots plus adde...    48   7e-004
gb|DR092307.1|DR092307  RTAL1_28_G05.b1_A029 Roots plus adde...    48   7e-004
gb|DR098553.1|DR098553  STRR1_46_F12.b1_A033 Stem Response R...    48   7e-004
gb|DR100599.1|DR100599  STRR1_65_E02.g1_A033 Stem Response R...    48   7e-004
gb|DR102236.1|DR102236  STRR1_79_C04.g1_A033 Stem Response R...    48   7e-004
gb|DR113034.1|DR113034  RTS1_32_B12.g1_A029 Roots minus sulf...    48   7e-004
gb|DR163422.1|DR163422  RTFE1_42_G07.g1_A029 Roots minus iro...    48   7e-004
gb|DR683982.1|DR683982  EST1074058 Normalized pine embryo li...    48   7e-004
gb|DR684423.1|DR684423  EST1074500 Normalized pine embryo li...    48   7e-004
gb|DT631935.1|DT631935  EST1146866 Normalized pine embryo li...    48   7e-004
gb|DT632413.1|DT632413  EST1147344 Normalized pine embryo li...    48   7e-004
gb|DT636492.1|DT636492  EST1151423 Normalized pine embryo li...    48   7e-004
gb|BX250040.1|BX250040  BX250040 Pinus pinaster differenciat...    46   0.003
gb|BQ198383.1|BQ198383  NXLV130_C02_F NXLV (Nsf Xylem Late w...    46   0.003
gb|CF386766.1|CF386766  RTDR1_16_C08.g1_A015 Loblolly pine r...    46   0.003
gb|CF400637.1|CF400637  RTWW1_6_B06.g1_A015 Well-watered lob...    46   0.003
gb|CF471900.1|CF471900  RTDS1_7_A08.b1_A015 Drought-stressed...    46   0.003
gb|CF471926.1|CF471926  RTDS1_7_A08.g1_A015 Drought-stressed...    46   0.003
gb|CF478581.1|CF478581  RTWW3_16_B04.b1_A022 Well-watered lo...    46   0.003
gb|CF668214.1|CF668214  RTCNT1_35_D04.b1_A029 Root control P...    46   0.003
gb|CF668294.1|CF668294  RTCNT1_35_D04.g1_A029 Root control P...    46   0.003
gb|DR021085.1|DR021085  STRS1_42_F09.b1_A034 Shoot tip pitch...    46   0.003
gb|DR021165.1|DR021165  STRS1_42_F09.g1_A034 Shoot tip pitch...    46   0.003
gb|DR095411.1|DR095411  STRR1_20_G09.g1_A033 Stem Response R...    46   0.003
gb|DR096360.1|DR096360  STRR1_27_B05.g1_A033 Stem Response R...    46   0.003
gb|DR120696.1|DR120696  RTMG1_31_G12.b1_A029 Roots minus mag...    46   0.003
gb|DR168662.1|DR168662  RTPHOS1_27_B09.b1_A029 Roots minus p...    46   0.003
gb|DR685073.1|DR685073  EST1075150 Normalized pine embryo li...    46   0.003
gb|CF477424.1|CF477424  RTWW3_7_B01.g1_A022 Well-watered lob...    44   0.011
gb|CO169428.1|CO169428  NDL1_7_B04.b1_A029 Needles control P...    44   0.011
gb|CO169500.1|CO169500  NDL1_7_B04.g1_A029 Needles control P...    44   0.011
gb|DR053875.1|DR053875  RTCA1_13_G12.g1_A029 Roots minus cal...    44   0.011
gb|DR119250.1|DR119250  RTMG1_22_C11.b1_A029 Roots minus mag...    44   0.011
gb|DR119331.1|DR119331  RTMG1_22_C11.g1_A029 Roots minus mag...    44   0.011
gb|DR745029.1|DR745029  RTCU1_26_C03.g1_A029 Roots plus adde...    44   0.011
gb|CF401946.1|CF401946  RTWW1_16_F09.b1_A015 Well-watered lo...    42   0.044
gb|CF402042.1|CF402042  RTWW1_16_F09.g1_A015 Well-watered lo...    42   0.044
gb|CV138360.1|CV138360  EST849569 Sequencing ESTs from loblo...    42   0.044
gb|AW290718.1|AW290718  NXNV046B02F Nsf Xylem Normal wood Ve...    40   0.17 
gb|AW985386.1|AW985386  NXNV_134_G08_F Nsf Xylem Normal wood...    40   0.17 
gb|BE049743.1|BE049743  NXNV_143_C08_F Nsf Xylem Normal wood...    40   0.17 
gb|BF186094.1|BF186094  NXCI_132_F04_F NXCI (Nsf Xylem Compr...    40   0.17 
gb|BF609081.1|BF609081  NXSI_040_B10_F NXSI (Nsf Xylem Side ...    40   0.17 
gb|BG275593.1|BG275593  NXSI_143_F09_F NXSI (Nsf Xylem Side ...    40   0.17 
gb|CD020758.1|CD020758  NXNV_085_G07_F Nsf Xylem Normal wood...    40   0.17 
gb|CD027376.1|CD027376  NXNV046B02 Nsf Xylem Normal wood Ver...    40   0.17 
gb|CF386668.1|CF386668  RTDR1_16_C08.b1_A015 Loblolly pine r...    40   0.17 
gb|CF396870.1|CF396870  RTDS2_24_A10.g1_A021 Drought-stresse...    40   0.17 
gb|CF400511.1|CF400511  RTWW1_6_B06.b1_A015 Well-watered lob...    40   0.17 
gb|CF474408.1|CF474408  RTWW2_20_A09.g1_A021 Well-watered lo...    40   0.17 
gb|CF668454.1|CF668454  RTCNT1_36_C09.g1_A029 Root control P...    40   0.17 
gb|CO197560.1|CO197560  GEO1_7_H02.b1_A029 Root gravitropism...    40   0.17 
gb|DR015200.1|DR015200  STRS1_2_C05.b1_A034 Shoot tip pitch ...    40   0.17 
gb|DR092975.1|DR092975  STRR1_5_F06.b1_A033 Stem Response Re...    40   0.17 
gb|DR100138.1|DR100138  STRR1_62_B05.b1_A033 Stem Response R...    40   0.17 
gb|DR100574.1|DR100574  STRR1_65_E02.b1_A033 Stem Response R...    40   0.17 
gb|DR102735.1|DR102735  STRR1_83_A06.g1_A033 Stem Response R...    40   0.17 
>gb|CF476071.1|CF476071 RTWW2_16_D03.g1_A021 Well-watered loblolly pine roots WW2 Pinus
           taeda cDNA clone RTWW2_16_D03_A021 5', mRNA sequence
          Length = 725

 Score = 67.9 bits (34), Expect = 8e-010
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 516 gggtggcagcccatgtcccggaactggggccagaactggcagagcaactcgtacctggac 575
           |||||||| || |||||||| |||||||||||||| ||||||||||||   |||||  ||
Sbjct: 413 gggtggcaaccaatgtcccgcaactggggccagaattggcagagcaacagttacctcaac 472

                                                 
Query: 576 aggcaggcgctctcgttccaggtcaccgccagcgacgg 613
            |||||   ||||| ||| |||||||| ||||||||||
Sbjct: 473 gggcagagcctctccttcaaggtcaccaccagcgacgg 510

 Score = 46.1 bits (23), Expect = 0.003
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 405 ggcggcatccggttcaccatcaacgggcactcctacttcaacctggt 451
           ||||| || ||||||||| | ||||||||||| |||||||| |||||
Sbjct: 302 ggcggaattcggttcaccgtgaacgggcactcgtacttcaatctggt 348
>gb|CF479898.1|CF479898 RTWW3_12_H04.g1_A022 Well-watered loblolly pine roots WW3 Pinus
           taeda cDNA clone RTWW3_12_H04_A022 5', mRNA sequence
          Length = 734

 Score = 67.9 bits (34), Expect = 8e-010
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 516 gggtggcagcccatgtcccggaactggggccagaactggcagagcaactcgtacctggac 575
           |||||||| || |||||||| |||||||||||||| ||||||||||||   |||||  ||
Sbjct: 380 gggtggcaaccaatgtcccgcaactggggccagaattggcagagcaacagttacctcaac 439

                                                 
Query: 576 aggcaggcgctctcgttccaggtcaccgccagcgacgg 613
            |||||   ||||| ||| |||||||| ||||||||||
Sbjct: 440 gggcagagcctctccttcaaggtcaccaccagcgacgg 477

 Score = 46.1 bits (23), Expect = 0.003
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 405 ggcggcatccggttcaccatcaacgggcactcctacttcaacctggt 451
           ||||| || ||||||||| | ||||||||||| |||||||| |||||
Sbjct: 269 ggcggaattcggttcaccgtgaacgggcactcgtacttcaatctggt 315
>gb|CO197872.1|CO197872 GEO1_9_E12.g1_A029 Root gravitropism April 2003 test Pinus taeda
           cDNA clone GEO1_9_E12_A029 5', mRNA sequence
          Length = 812

 Score = 67.9 bits (34), Expect = 8e-010
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 516 gggtggcagcccatgtcccggaactggggccagaactggcagagcaactcgtacctggac 575
           |||||||| || |||||||| |||||||||||||| ||||||||||||   |||||  ||
Sbjct: 663 gggtggcaaccaatgtcccgcaactggggccagaattggcagagcaacagttacctcaac 722

                                                 
Query: 576 aggcaggcgctctcgttccaggtcaccgccagcgacgg 613
            |||||   ||||| ||| |||||||| ||||||||||
Sbjct: 723 gggcagagcctctccttcaaggtcaccaccagcgacgg 760

 Score = 46.1 bits (23), Expect = 0.003
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 405 ggcggcatccggttcaccatcaacgggcactcctacttcaacctggt 451
           ||||| || ||||||||| | ||||||||||| |||||||| |||||
Sbjct: 552 ggcggaattcggttcaccgtgaacgggcactcgtacttcaatctggt 598
>gb|CX649869.1|CX649869 COLD1_42_B01.b1_A029 Root cold Pinus taeda cDNA clone
           COLD1_42_B01_A029 3', mRNA sequence
          Length = 792

 Score = 67.9 bits (34), Expect = 8e-010
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 516 gggtggcagcccatgtcccggaactggggccagaactggcagagcaactcgtacctggac 575
           |||||||| || |||||||| |||||||||||||| ||||||||||||   |||||  ||
Sbjct: 123 gggtggcaaccaatgtcccgcaactggggccagaattggcagagcaacagttacctcaac 182

                                                 
Query: 576 aggcaggcgctctcgttccaggtcaccgccagcgacgg 613
            |||||   ||||| ||| |||||||| ||||||||||
Sbjct: 183 gggcagagcctctccttcaaggtcaccaccagcgacgg 220

 Score = 46.1 bits (23), Expect = 0.003
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 405 ggcggcatccggttcaccatcaacgggcactcctacttcaacctggt 451
           ||||| || ||||||||| | ||||||||||| |||||||| |||||
Sbjct: 12  ggcggaattcggttcaccgtgaacgggcactcgtacttcaatctggt 58
>gb|CX649938.1|CX649938 COLD1_42_B01.g1_A029 Root cold Pinus taeda cDNA clone
           COLD1_42_B01_A029 5', mRNA sequence
          Length = 862

 Score = 67.9 bits (34), Expect = 8e-010
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 516 gggtggcagcccatgtcccggaactggggccagaactggcagagcaactcgtacctggac 575
           |||||||| || |||||||| |||||||||||||| ||||||||||||   |||||  ||
Sbjct: 646 gggtggcaaccaatgtcccgcaactggggccagaattggcagagcaacagttacctcaac 705

                                                 
Query: 576 aggcaggcgctctcgttccaggtcaccgccagcgacgg 613
            |||||   ||||| ||| |||||||| ||||||||||
Sbjct: 706 gggcagagcctctccttcaaggtcaccaccagcgacgg 743

 Score = 46.1 bits (23), Expect = 0.003
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 405 ggcggcatccggttcaccatcaacgggcactcctacttcaacctggt 451
           ||||| || ||||||||| | ||||||||||| |||||||| |||||
Sbjct: 535 ggcggaattcggttcaccgtgaacgggcactcgtacttcaatctggt 581
>gb|DR070227.1|DR070227 RTDK1_12_C03.b1_A029 Roots, dark Pinus taeda cDNA clone
           RTDK1_12_C03_A029 3', mRNA sequence
          Length = 725

 Score = 67.9 bits (34), Expect = 8e-010
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 516 gggtggcagcccatgtcccggaactggggccagaactggcagagcaactcgtacctggac 575
           |||||||| || |||||||| |||||||||||||| ||||||||||||   |||||  ||
Sbjct: 79  gggtggcaaccaatgtcccgcaactggggccagaattggcagagcaacagttacctcaac 138

                                                 
Query: 576 aggcaggcgctctcgttccaggtcaccgccagcgacgg 613
            |||||   ||||| ||| |||||||| ||||||||||
Sbjct: 139 gggcagagcctctccttcaaggtcaccaccagcgacgg 176
>gb|DR181356.1|DR181356 RTMNUT1_38_A01.g2_A029 Roots minus micronutrients Pinus taeda cDNA
           clone RTMNUT1_38_A01_A029 5', mRNA sequence
          Length = 765

 Score = 67.9 bits (34), Expect = 8e-010
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 516 gggtggcagcccatgtcccggaactggggccagaactggcagagcaactcgtacctggac 575
           |||||||| || |||||||| |||||||||||||| ||||||||||||   |||||  ||
Sbjct: 622 gggtggcaaccaatgtcccgcaactggggccagaattggcagagcaacagttacctcaac 681

                                                 
Query: 576 aggcaggcgctctcgttccaggtcaccgccagcgacgg 613
            |||||   ||||| ||| |||||||| ||||||||||
Sbjct: 682 gggcagagcctctccttcaaggtcaccaccagcgacgg 719

 Score = 46.1 bits (23), Expect = 0.003
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 405 ggcggcatccggttcaccatcaacgggcactcctacttcaacctggt 451
           ||||| || ||||||||| | ||||||||||| |||||||| |||||
Sbjct: 511 ggcggaattcggttcaccgtgaacgggcactcgtacttcaatctggt 557
>gb|U64890.1|PTU64890 Pinus taeda expansin mRNA, partial cds
          Length = 923

 Score = 67.9 bits (34), Expect = 8e-010
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaactcgtacctggacagg 578
           |||||||||||||| || |||||||| ||||||||||| ||||| ||||||||  || | 
Sbjct: 530 tggcagcccatgtcacgcaactggggacagaactggcaaagcaattcgtacctcaacgga 589

                                                 
Query: 579 caggcgctctcgttccaggtcaccgccagcgacggccg 616
           |||   || ||||||||||||||  ||||||| |||||
Sbjct: 590 cagagcctttcgttccaggtcacaaccagcgatggccg 627

 Score = 54.0 bits (27), Expect = 1e-005
 Identities = 78/95 (82%)
 Strand = Plus / Plus

                                                                       
Query: 234 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgc 293
           ||||| ||||||||||||||||| ||| |||  || |||| |||| |||| || ||||||
Sbjct: 245 acggctaccaacttctgcccgccgaacaacgctcttcccaacgacaacggtggatggtgc 304

                                              
Query: 294 aacccgccgcgcccgcacttcgacatggccgagcc 328
           ||||| ||||  | ||| ||||| ||||| |||||
Sbjct: 305 aacccaccgctgcagcatttcgatatggcggagcc 339
>gb|U64891.1|PTU64891 Pinus taeda expansin mRNA, partial cds
          Length = 919

 Score = 67.9 bits (34), Expect = 8e-010
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaactcgtacctggacagg 578
           |||||||||||||| || |||||||| ||||||||||| ||||| ||||||||  || | 
Sbjct: 530 tggcagcccatgtcacgcaactggggacagaactggcaaagcaattcgtacctcaacgga 589

                                                 
Query: 579 caggcgctctcgttccaggtcaccgccagcgacggccg 616
           |||   || ||||||||||||||  ||||||| |||||
Sbjct: 590 cagagcctttcgttccaggtcacaaccagcgatggccg 627

 Score = 61.9 bits (31), Expect = 5e-008
 Identities = 79/95 (83%)
 Strand = Plus / Plus

                                                                       
Query: 234 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgc 293
           ||||| ||||||||||||||||| ||| |||  ||||||| |||| |||| || ||||||
Sbjct: 245 acggctaccaacttctgcccgccaaacaacgctctccccaacgacaacggtggatggtgc 304

                                              
Query: 294 aacccgccgcgcccgcacttcgacatggccgagcc 328
           ||||| ||||  | ||| ||||| ||||| |||||
Sbjct: 305 aacccaccgctgcagcatttcgatatggcggagcc 339
>gb|U64893.1|PTU64893 Pinus taeda expansin mRNA, partial cds
          Length = 891

 Score = 67.9 bits (34), Expect = 8e-010
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaactcgtacctggacagg 578
           |||||||||||||| || |||||||| ||||||||||| |||||||| |||||  || | 
Sbjct: 530 tggcagcccatgtcacgcaactggggacagaactggcaaagcaactcctacctcaacgga 589

                                                 
Query: 579 caggcgctctcgttccaggtcaccgccagcgacggccg 616
           |||   || ||||||||||||||  ||||||| |||||
Sbjct: 590 cagagcctttcgttccaggtcacaaccagcgatggccg 627

 Score = 61.9 bits (31), Expect = 5e-008
 Identities = 79/95 (83%)
 Strand = Plus / Plus

                                                                       
Query: 234 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgc 293
           ||||| ||||||||||||||||| ||| |||  ||||||| |||| |||| || ||||||
Sbjct: 245 acggctaccaacttctgcccgccaaacaacgctctccccaacgacaacggtggatggtgc 304

                                              
Query: 294 aacccgccgcgcccgcacttcgacatggccgagcc 328
           ||||| ||||  | ||| ||||| ||||| |||||
Sbjct: 305 aacccaccgctgcagcatttcgatatggcggagcc 339
>gb|AF085330.1|AF085330 Pinus taeda expansin mRNA, complete cds
          Length = 998

 Score = 67.9 bits (34), Expect = 8e-010
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaactcgtacctggacagg 578
           |||||||||||||| || |||||||| ||||||||||| ||||| ||||||||  || | 
Sbjct: 681 tggcagcccatgtcacgcaactggggacagaactggcaaagcaattcgtacctcaacgga 740

                                                 
Query: 579 caggcgctctcgttccaggtcaccgccagcgacggccg 616
           |||   || ||||||||||||||  ||||||| |||||
Sbjct: 741 cagagcctttcgttccaggtcacaaccagcgatggccg 778

 Score = 54.0 bits (27), Expect = 1e-005
 Identities = 78/95 (82%)
 Strand = Plus / Plus

                                                                       
Query: 234 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgc 293
           ||||| |||||||||||||| || ||| |||  ||||||| |||| |||| || ||||||
Sbjct: 396 acggctaccaacttctgcccaccaaacaacgctctccccaacgacaacggtggatggtgc 455

                                              
Query: 294 aacccgccgcgcccgcacttcgacatggccgagcc 328
           ||||| ||||  | ||| ||||| ||||| |||||
Sbjct: 456 aacccaccgctgcagcatttcgatatggcggagcc 490
>gb|U64892.1|PTU64892 Pinus taeda expansin mRNA, partial cds
          Length = 923

 Score = 67.9 bits (34), Expect = 8e-010
 Identities = 82/98 (83%)
 Strand = Plus / Plus

                                                                       
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaactcgtacctggacagg 578
           |||||||||||||| || |||||||| ||||||||||| ||||| ||||||||  || | 
Sbjct: 530 tggcagcccatgtcacgcaactggggacagaactggcaaagcaattcgtacctcaacgga 589

                                                 
Query: 579 caggcgctctcgttccaggtcaccgccagcgacggccg 616
           |||   || ||||||||||||||  ||||||| |||||
Sbjct: 590 cagagcctttcgttccaggtcacaaccagcgatggccg 627

 Score = 61.9 bits (31), Expect = 5e-008
 Identities = 79/95 (83%)
 Strand = Plus / Plus

                                                                       
Query: 234 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgc 293
           ||||| ||||||||||||||||| ||| |||  ||||||| |||| |||| || ||||||
Sbjct: 245 acggctaccaacttctgcccgccaaacaacgctctccccaacgacaacggtggatggtgc 304

                                              
Query: 294 aacccgccgcgcccgcacttcgacatggccgagcc 328
           ||||| ||||  | ||| ||||| ||||| |||||
Sbjct: 305 aacccaccgctgcagcatttcgatatggcggagcc 339
>gb|CF391855.1|CF391855 RTDR3_10_C05.g1_A022 Loblolly pine roots recovering from drought
           DR3 Pinus taeda cDNA clone RTDR3_10_C05_A022 5', mRNA
           sequence
          Length = 765

 Score = 65.9 bits (33), Expect = 3e-009
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                        
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaac 563
           |||||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 605 tggcagccaatgtcccggaactggggccaaaattggcagagcaac 649
>gb|CN784348.1|CN784348 EST783039 Sequencing ESTs from loblolly pine embryos Pinus taeda
           cDNA clone PIAAK45 5' end, mRNA sequence
          Length = 778

 Score = 65.9 bits (33), Expect = 3e-009
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                        
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaac 563
           |||||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 584 tggcagccaatgtcccggaactggggccaaaattggcagagcaac 628
>gb|CX650764.1|CX650764 COLD1_48_A05.b1_A029 Root cold Pinus taeda cDNA clone
           COLD1_48_A05_A029 3', mRNA sequence
          Length = 650

 Score = 65.9 bits (33), Expect = 3e-009
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                        
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaac 563
           |||||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 394 tggcagccaatgtcccggaactggggccaaaattggcagagcaac 350
>gb|DR688987.1|DR688987 EST1079073 Normalized pine embryo library, Lib_D Pinus taeda cDNA
           clone PWACC87 3' end, mRNA sequence
          Length = 772

 Score = 65.9 bits (33), Expect = 3e-009
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                        
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaac 563
           |||||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 638 tggcagccaatgtcccggaactggggccaaaattggcagagcaac 682
>gb|DR692635.1|DR692635 EST1082723 Normalized pine embryo library, Lib_D Pinus taeda cDNA
           clone PWADO50 3' end, mRNA sequence
          Length = 902

 Score = 65.9 bits (33), Expect = 3e-009
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                        
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaac 563
           |||||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 641 tggcagccaatgtcccggaactggggccaaaattggcagagcaac 685
>gb|DT625757.1|DT625757 EST1157681 Sequencing ESTs from loblolly pine embryos Pinus taeda
           cDNA clone PIMA338 5' end, mRNA sequence
          Length = 817

 Score = 65.9 bits (33), Expect = 3e-009
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                        
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaac 563
           |||||||| |||||||||||||||||||| || ||||||||||||
Sbjct: 584 tggcagccaatgtcccggaactggggccaaaattggcagagcaac 628
>gb|DR070312.1|DR070312 RTDK1_12_C03.g1_A029 Roots, dark Pinus taeda cDNA clone
           RTDK1_12_C03_A029 5', mRNA sequence
          Length = 710

 Score = 63.9 bits (32), Expect = 1e-008
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                           
Query: 516 gggtggcagcccatgtcccggaactggggccagaactggcagagcaac 563
           |||||||| || |||||||| |||||||||||||| ||||||||||||
Sbjct: 585 gggtggcaaccaatgtcccgcaactggggccagaattggcagagcaac 632

 Score = 46.1 bits (23), Expect = 0.003
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 405 ggcggcatccggttcaccatcaacgggcactcctacttcaacctggt 451
           ||||| || ||||||||| | ||||||||||| |||||||| |||||
Sbjct: 474 ggcggaattcggttcaccgtgaacgggcactcgtacttcaatctggt 520
>gb|DR097316.1|DR097316 STRR1_33_H05.g3_A033 Stem Response Resistant Pinus taeda cDNA clone
           STRR1_33_H05_A033 5', mRNA sequence
          Length = 794

 Score = 63.9 bits (32), Expect = 1e-008
 Identities = 80/96 (83%)
 Strand = Plus / Minus

                                                                       
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaactcgtacctggacagg 578
           |||||| ||||||| || |||||||| ||||||||||| |||||||| |||||| || | 
Sbjct: 320 tggcaggccatgtcacgcaactggggacagaactggcaaagcaactcttacctgaacgga 261

                                               
Query: 579 caggcgctctcgttccaggtcaccgccagcgacggc 614
           |||   || || ||||| |||||| |||||||||||
Sbjct: 260 cagagcctatccttccaagtcaccaccagcgacggc 225

 Score = 48.1 bits (24), Expect = 7e-004
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                       
Query: 237 gccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgcaac 296
           |||||||||||||||||||| ||| | |  || |||| |||| ||||||| |||||||| 
Sbjct: 602 gccaccaacttctgcccgccaaacaatgctcttcccaacgacaacggcgggtggtgcaat 543

                                           
Query: 297 ccgccgcgcccgcacttcgacatggccgagcc 328
           |  || | || ||||||||| ||||| |||||
Sbjct: 542 ctacccctccagcacttcgatatggctgagcc 511
>gb|CO368672.1|CO368672 RTK1_42_C07.b1_A029 Roots minus potassium Pinus taeda cDNA clone
           RTK1_42_C07_A029 3', mRNA sequence
          Length = 839

 Score = 61.9 bits (31), Expect = 5e-008
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                       
Query: 528 atgtcccggaactggggccagaactggcagagcaactcgtacctggacaggcaggcgctc 587
           |||||||| |||||||| ||||| |||||||||||||| ||  || |  ||||| | |||
Sbjct: 153 atgtcccgcaactggggacagaattggcagagcaactcctatttgaatgggcagactctc 212

                                  
Query: 588 tcgttccaggtcaccgccagcga 610
           || |||||||||||| |||||||
Sbjct: 213 tctttccaggtcaccaccagcga 235
>gb|CO368748.1|CO368748 RTK1_42_C07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
           RTK1_42_C07_A029 5', mRNA sequence
          Length = 700

 Score = 61.9 bits (31), Expect = 5e-008
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                       
Query: 528 atgtcccggaactggggccagaactggcagagcaactcgtacctggacaggcaggcgctc 587
           |||||||| |||||||| ||||| |||||||||||||| ||  || |  ||||| | |||
Sbjct: 507 atgtcccgcaactggggacagaattggcagagcaactcctatttgaatgggcagactctc 566

                                  
Query: 588 tcgttccaggtcaccgccagcga 610
           || |||||||||||| |||||||
Sbjct: 567 tctttccaggtcaccaccagcga 589
>gb|DT624311.1|DT624311 EST1158586 Sequencing ESTs from loblolly pine embryos Pinus taeda
           cDNA clone PIMAD27 5' end, mRNA sequence
          Length = 886

 Score = 61.9 bits (31), Expect = 5e-008
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                       
Query: 528 atgtcccggaactggggccagaactggcagagcaactcgtacctggacaggcaggcgctc 587
           |||||||| |||||||| ||||| |||||||||||||| ||  || |  ||||| | |||
Sbjct: 660 atgtcccgcaactggggacagaattggcagagcaactcctatttgaatgggcagactctc 719

                                  
Query: 588 tcgttccaggtcaccgccagcga 610
           || |||||||||||| |||||||
Sbjct: 720 tctttccaggtcaccaccagcga 742

 Score = 42.1 bits (21), Expect = 0.044
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 417 ttcaccatcaacgggcactcctacttcaa 445
           ||||| ||||| |||||||||||||||||
Sbjct: 549 ttcacgatcaatgggcactcctacttcaa 577
>gb|BG039378.1|BG039378 NXSI_098_D11_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
           clone NXSI_098_D11 5' similar to Arabidopsis thaliana
           sequence At3g03220 putative expansin precursor see
           http://mips.gsf.de/proj/thal/db/index.html, mRNA
           sequence
          Length = 544

 Score = 58.0 bits (29), Expect = 7e-007
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                       
Query: 231 gtcacggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctgg 290
           ||||| ||||| || ||||||||||| ||||||||||| ||  | ||||| ||||| |||
Sbjct: 93  gtcacagccacgaatttctgcccgccgaactacggcctgcctggggacgatggcgggtgg 152

                                    
Query: 291 tgcaacccgccgcgcccgcacttcg 315
           ||||| ||||| |||| ||| ||||
Sbjct: 153 tgcaatccgcctcgccagcatttcg 177
>gb|CF399941.1|CF399941 RTWW1_2_C11.b1_A015 Well-watered loblolly pine roots WW1 Pinus
           taeda cDNA clone RTWW1_2_C11_A015 3', mRNA sequence
          Length = 668

 Score = 58.0 bits (29), Expect = 7e-007
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaactcgtacct 571
           |||||||||||||| || |||||||| ||||||||||| ||||| || |||||
Sbjct: 231 tggcagcccatgtcacgcaactggggacagaactggcaaagcaattcctacct 283

 Score = 44.1 bits (22), Expect = 0.011
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 393 tgcgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttcaacctggtg 452
           ||||||| |||||| || || || |||||| | || || ||||| |||||||||||||||
Sbjct: 105 tgcgtgaggaagggaggaattcgtttcaccgtgaatggccactcatacttcaacctggtg 164

             
Query: 453 ct 454
           ||
Sbjct: 165 ct 166
>gb|CF400653.1|CF400653 RTWW1_6_A01.g1_A015 Well-watered loblolly pine roots WW1 Pinus
           taeda cDNA clone RTWW1_6_A01_A015 5', mRNA sequence
          Length = 559

 Score = 58.0 bits (29), Expect = 7e-007
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                       
Query: 231 gtcacggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctgg 290
           ||||| ||||| || ||||||||||| ||||||||||| ||  | ||||| ||||| |||
Sbjct: 138 gtcacagccacgaatttctgcccgccgaactacggcctgcctggggacgatggcgggtgg 197

                                    
Query: 291 tgcaacccgccgcgcccgcacttcg 315
           ||||| ||||| |||| ||| ||||
Sbjct: 198 tgcaatccgcctcgccagcatttcg 222
>gb|CF475910.1|CF475910 RTWW2_15_D07.g1_A021 Well-watered loblolly pine roots WW2 Pinus
           taeda cDNA clone RTWW2_15_D07_A021 5', mRNA sequence
          Length = 664

 Score = 58.0 bits (29), Expect = 7e-007
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                       
Query: 231 gtcacggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctgg 290
           ||||| ||||| || ||||||||||| ||||||||||| ||  | ||||| ||||| |||
Sbjct: 62  gtcacagccacgaatttctgcccgccgaactacggcctgcctggggacgatggcgggtgg 121

                                    
Query: 291 tgcaacccgccgcgcccgcacttcg 315
           ||||| ||||| |||| ||| ||||
Sbjct: 122 tgcaatccgcctcgccagcatttcg 146
>gb|CO172418.1|CO172418 NDL1_29_D02.g1_A029 Needles control Pinus taeda cDNA clone
           NDL1_29_D02_A029 5', mRNA sequence
          Length = 728

 Score = 58.0 bits (29), Expect = 7e-007
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 231 gtcacggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctgg 290
           ||||| ||||| || ||||||||||| ||||||||||| ||  | ||||| ||||| |||
Sbjct: 642 gtcacagccacgaatttctgcccgccgaactacggcctgcctggggacgatggcgggtgg 583

                                    
Query: 291 tgcaacccgccgcgcccgcacttcg 315
           ||||| ||||| |||| ||| ||||
Sbjct: 582 tgcaatccgcctcgccagcatttcg 558
>gb|CX650634.1|CX650634 COLD1_47_B12.b1_A029 Root cold Pinus taeda cDNA clone
           COLD1_47_B12_A029 3', mRNA sequence
          Length = 711

 Score = 58.0 bits (29), Expect = 7e-007
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaactcgtacct 571
           |||||||||||||| || |||||||| ||||||||||| ||||| || |||||
Sbjct: 177 tggcagcccatgtcacgcaactggggacagaactggcaaagcaattcctacct 229

 Score = 44.1 bits (22), Expect = 0.011
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 393 tgcgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttcaacctggtg 452
           ||||||| |||||| || || || |||||| | || || ||||| |||||||||||||||
Sbjct: 51  tgcgtgaggaagggaggaattcgtttcaccgtgaatggccactcatacttcaacctggtg 110

             
Query: 453 ct 454
           ||
Sbjct: 111 ct 112
>gb|CX650703.1|CX650703 COLD1_47_B12.g1_A029 Root cold Pinus taeda cDNA clone
           COLD1_47_B12_A029 5', mRNA sequence
          Length = 629

 Score = 58.0 bits (29), Expect = 7e-007
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaactcgtacct 571
           |||||||||||||| || |||||||| ||||||||||| ||||| || |||||
Sbjct: 459 tggcagcccatgtcacgcaactggggacagaactggcaaagcaattcctacct 511

 Score = 54.0 bits (27), Expect = 1e-005
 Identities = 78/95 (82%)
 Strand = Plus / Plus

                                                                       
Query: 234 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgc 293
           ||||| || |||||||||||||| ||| |||  ||||||| |||| |||| || ||||||
Sbjct: 174 acggctactaacttctgcccgccaaacaacgctctccccaacgacaacggtggatggtgc 233

                                              
Query: 294 aacccgccgcgcccgcacttcgacatggccgagcc 328
           ||||| ||||  | ||| ||||| ||||| |||||
Sbjct: 234 aacccaccgctgcagcatttcgatatggcggagcc 268

 Score = 44.1 bits (22), Expect = 0.011
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 393 tgcgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttcaacctggtg 452
           ||||||| |||||| || || || |||||| | || || ||||| |||||||||||||||
Sbjct: 333 tgcgtgaggaagggaggaattcgtttcaccgtgaatggccactcatacttcaacctggtg 392

             
Query: 453 ct 454
           ||
Sbjct: 393 ct 394
>gb|DR055360.1|DR055360 RTCA1_23_E11.b1_A029 Roots minus calcium Pinus taeda cDNA clone
           RTCA1_23_E11_A029 3', mRNA sequence
          Length = 688

 Score = 58.0 bits (29), Expect = 7e-007
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaactcgtacct 571
           ||||| ||||||||| ||||||||||    |||||||||||||||||||||||
Sbjct: 58  tggcaacccatgtccaggaactggggagccaactggcagagcaactcgtacct 110
>gb|DR055518.1|DR055518 RTCA1_24_E10.b1_A029 Roots minus calcium Pinus taeda cDNA clone
           RTCA1_24_E10_A029 3', mRNA sequence
          Length = 820

 Score = 58.0 bits (29), Expect = 7e-007
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaactcgtacct 571
           ||||| ||||||||| ||||||||||    |||||||||||||||||||||||
Sbjct: 189 tggcaacccatgtccaggaactggggagccaactggcagagcaactcgtacct 241
>gb|DR070635.1|DR070635 RTDK1_14_D09.g1_A029 Roots, dark Pinus taeda cDNA clone
           RTDK1_14_D09_A029 5', mRNA sequence
          Length = 657

 Score = 58.0 bits (29), Expect = 7e-007
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaactcgtacct 571
           ||||| ||||||||| ||||||||||    |||||||||||||||||||||||
Sbjct: 21  tggcaacccatgtccaggaactggggagccaactggcagagcaactcgtacct 73
>gb|DR692432.1|DR692432 EST1082520 Normalized pine embryo library, Lib_D Pinus taeda cDNA
           clone PWADM10 3' end, mRNA sequence
          Length = 820

 Score = 58.0 bits (29), Expect = 7e-007
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaactcgtacct 571
           ||||| ||||||||| ||||||||||    |||||||||||||||||||||||
Sbjct: 699 tggcaacccatgtccaggaactggggagccaactggcagagcaactcgtacct 751
>gb|DR011201.1|DR011201 HEAT1_4_E06.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
           HEAT1_4_E06_A029 3', mRNA sequence
          Length = 752

 Score = 56.0 bits (28), Expect = 3e-006
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaa 562
           |||||||||||||| || |||||||| ||||||||||| |||||
Sbjct: 251 tggcagcccatgtcacgcaactggggacagaactggcaaagcaa 294
>gb|DR047687.1|DR047687 RTBOR1_2_F07.g1_A029 Roots plus added boron Pinus taeda cDNA clone
           RTBOR1_2_F07_A029 5', mRNA sequence
          Length = 689

 Score = 56.0 bits (28), Expect = 3e-006
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaa 562
           |||||||||||||| || |||||||| ||||||||||| |||||
Sbjct: 130 tggcagcccatgtcacgcaactggggacagaactggcaaagcaa 173
>gb|DR120161.1|DR120161 RTMG1_27_H07.g2_A029 Roots minus magnesium Pinus taeda cDNA clone
           RTMG1_27_H07_A029 5', mRNA sequence
          Length = 693

 Score = 56.0 bits (28), Expect = 3e-006
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaa 562
           |||||||||||||| || |||||||| ||||||||||| |||||
Sbjct: 620 tggcagcccatgtcacgcaactggggacagaactggcaaagcaa 663
>gb|DR180723.1|DR180723 RTMNUT1_34_A06.g1_A029 Roots minus micronutrients Pinus taeda cDNA
           clone RTMNUT1_34_A06_A029 5', mRNA sequence
          Length = 773

 Score = 56.0 bits (28), Expect = 3e-006
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaa 562
           |||||||||||||| || |||||||| ||||||||||| |||||
Sbjct: 597 tggcagcccatgtcacgcaactggggacagaactggcaaagcaa 640
>gb|CF400025.1|CF400025 RTWW1_2_C11.g1_A015 Well-watered loblolly pine roots WW1 Pinus
           taeda cDNA clone RTWW1_2_C11_A015 5', mRNA sequence
          Length = 560

 Score = 54.0 bits (27), Expect = 1e-005
 Identities = 78/95 (82%)
 Strand = Plus / Plus

                                                                       
Query: 234 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgc 293
           ||||| || |||||||||||||| ||| |||  ||||||| |||| |||| || ||||||
Sbjct: 156 acggctactaacttctgcccgccaaacaacgctctccccaacgacaacggtggatggtgc 215

                                              
Query: 294 aacccgccgcgcccgcacttcgacatggccgagcc 328
           ||||| ||||  | ||| ||||| ||||| |||||
Sbjct: 216 aacccaccgctgcagcatttcgatatggcggagcc 250

 Score = 44.1 bits (22), Expect = 0.011
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 393 tgcgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttcaacctggtg 452
           ||||||| |||||| || || || |||||| | || || ||||| |||||||||||||||
Sbjct: 422 tgcgtgaggaagggaggaattcgtttcaccgtgaatggccactcatacttcaacctggtg 481

             
Query: 453 ct 454
           ||
Sbjct: 482 ct 483
>gb|CF663902.1|CF663902 RTCNT1_5_H12.g1_A029 Root control Pinus taeda cDNA clone
           RTCNT1_5_H12_A029 5', mRNA sequence
          Length = 699

 Score = 54.0 bits (27), Expect = 1e-005
 Identities = 78/95 (82%)
 Strand = Plus / Plus

                                                                       
Query: 234 acggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggtgc 293
           ||||| || |||||||||||||| ||| |||  ||||||| |||| |||| || ||||||
Sbjct: 397 acggctactaacttctgcccgccaaacaacgctctccccaacgacaacggtggatggtgc 456

                                              
Query: 294 aacccgccgcgcccgcacttcgacatggccgagcc 328
           ||||| ||||  | ||| ||||| ||||| |||||
Sbjct: 457 aacccaccgctgcagcatttcgatatggcggagcc 491

 Score = 44.1 bits (22), Expect = 0.011
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 393 tgcgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttcaacctggtg 452
           ||||||| |||||| || || || |||||| | || || ||||| |||||||||||||||
Sbjct: 556 tgcgtgaggaagggaggaattcgtttcaccgtgaatggccactcatacttcaacctggtg 615

             
Query: 453 ct 454
           ||
Sbjct: 616 ct 617
>gb|CF666895.1|CF666895 RTCNT1_26_G11.g1_A029 Root control Pinus taeda cDNA clone
           RTCNT1_26_G11_A029 5', mRNA sequence
          Length = 779

 Score = 54.0 bits (27), Expect = 1e-005
 Identities = 75/91 (82%)
 Strand = Plus / Plus

                                                                       
Query: 232 tcacggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggt 291
           ||||||| ||||| ||||||||||| || |||| |||| | |  ||||| ||||| ||||
Sbjct: 341 tcacggcaaccaatttctgcccgcctaattacgccctcgcaaatgacgatggcgggtggt 400

                                          
Query: 292 gcaacccgccgcgcccgcacttcgacatggc 322
           |||| || || |||  |||||||||||||||
Sbjct: 401 gcaatcctcctcgcgagcacttcgacatggc 431
>gb|CO171305.1|CO171305 NDL1_20_C09.g1_A029 Needles control Pinus taeda cDNA clone
           NDL1_20_C09_A029 5', mRNA sequence
          Length = 776

 Score = 54.0 bits (27), Expect = 1e-005
 Identities = 75/91 (82%)
 Strand = Plus / Plus

                                                                       
Query: 232 tcacggccaccaacttctgcccgcccaactacggcctccccagcgacgacggcggctggt 291
           ||||||| ||||| ||||||||||| || |||| |||| | |  ||||| ||||| ||||
Sbjct: 338 tcacggcaaccaatttctgcccgcctaattacgccctcgcaaatgacgatggcgggtggt 397

                                          
Query: 292 gcaacccgccgcgcccgcacttcgacatggc 322
           |||| || || |||  |||||||||||||||
Sbjct: 398 gcaatcctcctcgcgagcacttcgacatggc 428
>gb|CO369598.1|CO369598 RTK1_48_F01.b1_A029 Roots minus potassium Pinus taeda cDNA clone
           RTK1_48_F01_A029 3', mRNA sequence
          Length = 820

 Score = 54.0 bits (27), Expect = 1e-005
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                       
Query: 528 atgtcccggaactggggccagaactggcagagcaactcgtacctggacaggcaggcgctc 587
           |||||||| |||||||| ||||| |||||||||||||| ||  || |  |||||   |||
Sbjct: 366 atgtcccgcaactggggacagaattggcagagcaactcctatttgaatgggcagagtctc 307

                                  
Query: 588 tcgttccaggtcaccgccagcga 610
           || |||||||||||| |||||||
Sbjct: 306 tccttccaggtcaccaccagcga 284
>gb|CO369680.1|CO369680 RTK1_48_F01.g1_A029 Roots minus potassium Pinus taeda cDNA clone
           RTK1_48_F01_A029 5', mRNA sequence
          Length = 697

 Score = 54.0 bits (27), Expect = 1e-005
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                       
Query: 528 atgtcccggaactggggccagaactggcagagcaactcgtacctggacaggcaggcgctc 587
           |||||||| |||||||| ||||| |||||||||||||| ||  || |  |||||   |||
Sbjct: 580 atgtcccgcaactggggacagaattggcagagcaactcctatttgaatgggcagagtctc 521

                                  
Query: 588 tcgttccaggtcaccgccagcga 610
           || |||||||||||| |||||||
Sbjct: 520 tccttccaggtcaccaccagcga 498
>gb|CV035793.1|CV035793 RTNACL1_42_B01.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
           RTNACL1_42_B01_A029 5', mRNA sequence
          Length = 767

 Score = 54.0 bits (27), Expect = 1e-005
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 390 ccgtgcgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttcaacct 448
           |||||| ||| ||||||||| || || |||||||||| ||| ||||| |||||||||||
Sbjct: 684 ccgtgcttgaggaagggcggaattcgcttcaccatcaccggccactcatacttcaacct 626

 Score = 48.1 bits (24), Expect = 7e-004
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaa 562
           |||||||| ||||| || |||||||| ||||||||||| |||||
Sbjct: 555 tggcagcctatgtcacgcaactggggacagaactggcaaagcaa 512
>gb|CV144435.1|CV144435 EST855644 Sequencing ESTs from loblolly pine embryos Pinus taeda
           cDNA clone RPID557 5' end, mRNA sequence
          Length = 769

 Score = 54.0 bits (27), Expect = 1e-005
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                       
Query: 528 atgtcccggaactggggccagaactggcagagcaactcgtacctggacaggcaggcgctc 587
           |||||||| |||||||| ||||| |||||||||||||| ||  || |  |||||   |||
Sbjct: 641 atgtcccgcaactggggacagaattggcagagcaactcctatttgaatgggcagagtctc 700

                                  
Query: 588 tcgttccaggtcaccgccagcga 610
           || |||||||||||| |||||||
Sbjct: 701 tctttccaggtcaccaccagcga 723

 Score = 42.1 bits (21), Expect = 0.044
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 417 ttcaccatcaacgggcactcctacttcaa 445
           ||||| ||||| |||||||||||||||||
Sbjct: 530 ttcacgatcaatgggcactcctacttcaa 558
>gb|DR071171.1|DR071171 RTDK1_18_C12.b1_A029 Roots, dark Pinus taeda cDNA clone
           RTDK1_18_C12_A029 3', mRNA sequence
          Length = 808

 Score = 54.0 bits (27), Expect = 1e-005
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 390 ccgtgcgtgaagaagggcggcatccggttcaccatcaacgggcactcctacttcaacct 448
           |||||| ||| ||||||||| || || |||||||||| ||| ||||| |||||||||||
Sbjct: 199 ccgtgcttgaggaagggcggaattcgcttcaccatcaccggccactcatacttcaacct 257

 Score = 48.1 bits (24), Expect = 7e-004
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 519 tggcagcccatgtcccggaactggggccagaactggcagagcaa 562
           |||||||| ||||| || |||||||| ||||||||||| |||||
Sbjct: 328 tggcagcctatgtcacgcaactggggacagaactggcaaagcaa 371
>gb|DT624714.1|DT624714 EST1159049 Sequencing ESTs from loblolly pine embryos Pinus taeda
           cDNA clone PIMAI31 5' end, mRNA sequence
          Length = 844

 Score = 54.0 bits (27), Expect = 1e-005
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                       
Query: 528 atgtcccggaactggggccagaactggcagagcaactcgtacctggacaggcaggcgctc 587
           |||||||| |||||||| ||||| |||||||||||||| ||  || |  |||||   |||
Sbjct: 641 atgtcccgcaactggggacagaattggcagagcaactcctatttgaatgggcagagtctc 700

                                  
Query: 588 tcgttccaggtcaccgccagcga 610
           || |||||||||||| |||||||
Sbjct: 701 tctttccaggtcaccaccagcga 723

 Score = 42.1 bits (21), Expect = 0.044
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 417 ttcaccatcaacgggcactcctacttcaa 445
           ||||| ||||| |||||||||||||||||
Sbjct: 530 ttcacgatcaatgggcactcctacttcaa 558
>gb|CF477384.1|CF477384 RTWW3_7_A01.g1_A022 Well-watered loblolly pine roots WW3 Pinus
           taeda cDNA clone RTWW3_7_A01_A022 5', mRNA sequence
          Length = 715

 Score = 52.0 bits (26), Expect = 5e-005
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 528 atgtcccggaactggggccagaactggcagagcaactc 565
           |||||||| |||||||| ||||| ||||||||||||||
Sbjct: 653 atgtcccgcaactggggacagaattggcagagcaactc 690

 Score = 44.1 bits (22), Expect = 0.011
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 417 ttcaccatcaacgggcactcctacttcaacctggtgct 454
           ||||| ||||| |||||||||||||||||  |||||||
Sbjct: 542 ttcacgatcaatgggcactcctacttcaatttggtgct 579
>gb|CO361349.1|CO361349 NDL2_4_G08.b1_A029 Needles control 2 Pinus taeda cDNA clone
           NDL2_4_G08_A029 3', mRNA sequence
          Length = 819

 Score = 52.0 bits (26), Expect = 5e-005
 Identities = 59/70 (84%)
 Strand = Plus / Plus

                                                                       
Query: 246 ttctgcccgcccaactacggcctccccagcgacgacggcggctggtgcaacccgccgcgc 305
           ||||||||||| ||||||||||| ||  | ||||| ||||| |||||||| ||||| |||
Sbjct: 35  ttctgcccgccgaactacggcctgcctggggacgatggcgggtggtgcaatccgcctcgc 94

                     
Query: 306 ccgcacttcg 315
           | ||| ||||
Sbjct: 95  cagcatttcg 104
  Database: Pinus_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:45 PM
  Number of letters in database: 217,277,237
  Number of sequences in database:  355,925
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 80,865
Number of Sequences: 355925
Number of extensions: 80865
Number of successful extensions: 23325
Number of sequences better than  0.5: 186
Number of HSP's better than  0.5 without gapping: 183
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 22650
Number of HSP's gapped (non-prelim): 641
length of query: 1022
length of database: 217,277,237
effective HSP length: 19
effective length of query: 1003
effective length of database: 210,514,662
effective search space: 211146205986
effective search space used: 211146205986
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)