BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3478999.2.1
(825 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DN632011.1|DN632011 EST982827 Subtracted pine embryo lib... 212 2e-053
gb|CF390333.1|CF390333 RTDR2_18_H07.g1_A021 Loblolly pine r... 204 4e-051
gb|CF390646.1|CF390646 RTDR2_20_A10.g1_A021 Loblolly pine r... 204 4e-051
gb|CF392858.1|CF392858 RTDR3_19_B12.g1_A022 Loblolly pine r... 204 4e-051
gb|CF394590.1|CF394590 RTDS2_6_F03.g1_A021 Drought-stressed... 204 4e-051
gb|CF471162.1|CF471162 RTDS1_16_G01.g1_A015 Drought-stresse... 204 4e-051
gb|CF471914.1|CF471914 RTDS1_7_A07.g1_A015 Drought-stressed... 204 4e-051
gb|CF474453.1|CF474453 RTWW2_20_G08.g1_A021 Well-watered lo... 204 4e-051
gb|CF474564.1|CF474564 RTWW2_9_F07.g1_A021 Well-watered lob... 204 4e-051
gb|CF476203.1|CF476203 RTWW2_21_B05.g1_A021 Well-watered lo... 204 4e-051
gb|CF478197.1|CF478197 RTWW3_19_G10.g1_A022 Well-watered lo... 204 4e-051
gb|CF479658.1|CF479658 RTWW3_11_G07.g1_A022 Well-watered lo... 204 4e-051
gb|CF670017.1|CF670017 RTCNT1_47_C08.g1_A029 Root control P... 204 4e-051
gb|CF671674.1|CF671674 RTCNT1_58_C05.g1_A029 Root control P... 204 4e-051
gb|CO159768.1|CO159768 FLD1_15_F02.g1_A029 Root flooded Pin... 204 4e-051
gb|CO160965.1|CO160965 FLD1_25_F03.g1_A029 Root flooded Pin... 204 4e-051
gb|CO161236.1|CO161236 FLD1_27_B02.g1_A029 Root flooded Pin... 204 4e-051
gb|CO163592.1|CO163592 FLD1_42_C08.g1_A029 Root flooded Pin... 204 4e-051
gb|CO172518.1|CO172518 NDL1_30_F02.b1_A029 Needles control ... 204 4e-051
gb|CO172528.1|CO172528 NDL1_30_G02.b1_A029 Needles control ... 204 4e-051
gb|CO173019.1|CO173019 NDL1_33_A12.g1_A029 Needles control ... 204 4e-051
gb|CO199485.1|CO199485 GEO2_1_B11.g1_A032 Root gravitropism... 204 4e-051
gb|CO362025.1|CO362025 NDL2_8_D09.g1_A029 Needles control 2... 204 4e-051
gb|CO369623.1|CO369623 RTK1_48_H05.b1_A029 Roots minus pota... 204 4e-051
gb|CO369704.1|CO369704 RTK1_48_H05.g1_A029 Roots minus pota... 204 4e-051
gb|CX650465.1|CX650465 COLD1_45_H01.g1_A029 Root cold Pinus... 204 4e-051
gb|DN453990.1|DN453990 EST949789 Sequencing ESTs from loblo... 204 4e-051
gb|DN629517.1|DN629517 EST980333 Subtracted pine embryo lib... 204 4e-051
gb|DR015001.1|DR015001 HEAT1_52_H07.g1_A029 Root at 37 C fo... 204 4e-051
gb|DR050737.1|DR050737 RTBOR1_25_H06.b1_A029 Roots plus add... 204 4e-051
gb|DR051022.1|DR051022 RTBOR1_27_E03.b1_A029 Roots plus add... 204 4e-051
gb|DR051825.1|DR051825 RTBOR1_32_D07.g1_A029 Roots plus add... 204 4e-051
gb|DR069352.1|DR069352 RTDK1_6_E09.g1_A029 Roots, dark Pinu... 204 4e-051
gb|DR070016.1|DR070016 RTDK1_10_F07.g1_A029 Roots, dark Pin... 204 4e-051
gb|DR071865.1|DR071865 RTDK1_22_C05.g1_A029 Roots, dark Pin... 204 4e-051
gb|DR080599.1|DR080599 RTFEPL1_23_G06.g1_A029 Roots plus ad... 204 4e-051
gb|DR092849.1|DR092849 STRR1_4_A03.g1_A033 Stem Response Re... 204 4e-051
gb|DR095701.1|DR095701 STRR1_23_B08.b1_A033 Stem Response R... 204 4e-051
gb|DR095772.1|DR095772 STRR1_23_B08.g1_A033 Stem Response R... 204 4e-051
gb|DR096537.1|DR096537 STRR1_28_D02.g1_A033 Stem Response R... 204 4e-051
gb|DR098906.1|DR098906 STRR1_48_D12.g1_A033 Stem Response R... 204 4e-051
gb|DR118368.1|DR118368 RTMG1_12_G11.g1_A029 Roots minus mag... 204 4e-051
gb|DR165215.1|DR165215 RTPHOS1_3_A06.g1_A029 Roots minus ph... 204 4e-051
gb|DR180620.1|DR180620 RTMNUT1_33_F07.g1_A029 Roots minus m... 204 4e-051
gb|DR180898.1|DR180898 RTMNUT1_35_C02.g1_A029 Roots minus m... 204 4e-051
gb|DT625059.1|DT625059 EST1159334 Sequencing ESTs from lobl... 204 4e-051
gb|CO172443.1|CO172443 NDL1_29_F06.g1_A029 Needles control ... 202 2e-050
gb|CO369294.1|CO369294 RTK1_46_E05.b1_A029 Roots minus pota... 202 2e-050
gb|CX649658.1|CX649658 COLD1_36_E02.g1_A029 Root cold Pinus... 202 2e-050
gb|DR012151.1|DR012151 HEAT1_10_C06.g1_A029 Root at 37 C fo... 202 2e-050
gb|DR023998.1|DR023998 STRS1_61_C12.g1_A034 Shoot tip pitch... 202 2e-050
gb|DR051102.1|DR051102 RTBOR1_27_E03.g1_A029 Roots plus add... 202 2e-050
gb|DR109388.1|DR109388 RTS1_1_D07.g1_A029 Roots minus sulfu... 202 2e-050
gb|DR111086.1|DR111086 RTS1_15_D08.b1_A029 Roots minus sulf... 202 2e-050
gb|DR111233.1|DR111233 RTS1_16_F05.b1_A029 Roots minus sulf... 200 6e-050
gb|DR384491.1|DR384491 RTHG1_2_C10.g1_A029 Roots plus added... 200 6e-050
gb|CF392737.1|CF392737 RTDR3_5_G03.g1_A022 Loblolly pine ro... 198 3e-049
gb|BG317999.1|BG317999 NXPV_008_D03_F NXPV (Nsf Xylem Plani... 196 1e-048
gb|BI076909.1|BI076909 NXPV_082_E10_F NXPV (Nsf Xylem Plani... 196 1e-048
gb|CF474311.1|CF474311 RTWW2_20_G08.b1_A021 Well-watered lo... 196 1e-048
gb|CO157723.1|CO157723 FLD1_1_D10.g1_A029 Root flooded Pinu... 196 1e-048
gb|CO161153.1|CO161153 FLD1_27_B02.b1_A029 Root flooded Pin... 196 1e-048
gb|CO361950.1|CO361950 NDL2_8_D09.b1_A029 Needles control 2... 196 1e-048
gb|CX649582.1|CX649582 COLD1_36_E02.b1_A029 Root cold Pinus... 196 1e-048
gb|DR011179.1|DR011179 HEAT1_4_C05.b1_A029 Root at 37 C for... 196 1e-048
gb|DR011251.1|DR011251 HEAT1_4_C05.g1_A029 Root at 37 C for... 196 1e-048
gb|DR014915.1|DR014915 HEAT1_52_H07.b1_A029 Root at 37 C fo... 196 1e-048
gb|DR018452.1|DR018452 STRS1_23_C11.b1_A034 Shoot tip pitch... 196 1e-048
gb|DR057118.1|DR057118 RTNIT1_2_E07.g1_A029 Roots minus nit... 196 1e-048
gb|DR069344.1|DR069344 RTDK1_6_D09.g1_A029 Roots, dark Pinu... 196 1e-048
gb|DR098999.1|DR098999 STRR1_50_F01.b1_A033 Stem Response R... 196 1e-048
gb|DR178192.1|DR178192 RTMNUT1_10_B01.b1_A029 Roots minus m... 196 1e-048
gb|DR178261.1|DR178261 RTMNUT1_10_B01.g1_A029 Roots minus m... 196 1e-048
gb|DR385831.1|DR385831 RTHG1_11_D08.b1_A029 Roots plus adde... 196 1e-048
gb|DR688181.1|DR688181 EST1078265 Normalized pine embryo li... 196 1e-048
gb|DR689918.1|DR689918 EST1080004 Normalized pine embryo li... 196 1e-048
gb|BG318574.1|BG318574 NXPV_015_D04_F NXPV (Nsf Xylem Plani... 194 4e-048
gb|BE458158.1|BE458158 NXCI_010_B06_F NXCI (Nsf Xylem Compr... 188 2e-046
gb|CV034005.1|CV034005 RTNACL1_38_A08.b1_A029 Roots plus ad... 188 2e-046
gb|DN632586.1|DN632586 EST983402 Subtracted pine embryo lib... 188 2e-046
gb|DR051752.1|DR051752 RTBOR1_32_D07.b1_A029 Roots plus add... 186 1e-045
gb|BQ696816.1|BQ696816 NXPV_045_E10_F NXPV (Nsf Xylem Plani... 184 4e-045
gb|BE187191.1|BE187191 NXNV_160_D05_F Nsf Xylem Normal wood... 182 2e-044
gb|DR688295.1|DR688295 EST1078379 Normalized pine embryo li... 182 2e-044
gb|DR092782.1|DR092782 STRR1_4_A03.b1_A033 Stem Response Re... 178 2e-043
gb|BM493586.1|BM493586 NXLV_066_H03_F NXLV (Nsf Xylem Late ... 174 4e-042
gb|CO163510.1|CO163510 FLD1_42_C08.b1_A029 Root flooded Pin... 174 4e-042
gb|DR071784.1|DR071784 RTDK1_22_C05.b1_A029 Roots, dark Pin... 174 4e-042
gb|DR118286.1|DR118286 RTMG1_12_G11.b1_A029 Roots minus mag... 174 4e-042
gb|AI725056.1|AI725056 955 PtIFG2 Pinus taeda cDNA clone 88... 172 1e-041
gb|DR053468.1|DR053468 RTCA1_11_H01.b1_A029 Roots minus cal... 172 1e-041
gb|DR180534.1|DR180534 RTMNUT1_33_F07.b1_A029 Roots minus m... 172 1e-041
gb|CF396723.1|CF396723 RTDS2_23_G03.g1_A021 Drought-stresse... 168 2e-040
gb|BX252928.1|BX252928 BX252928 Pinus pinaster differenciat... 165 4e-039
gb|AL749594.1|AL749594 AL749594 AN Pinus pinaster cDNA clon... 163 1e-038
gb|DR099013.1|DR099013 STRR1_50_F01.g1_A033 Stem Response R... 163 1e-038
gb|AI812644.1|AI812644 17D3 Pine Lambda Zap Xylem library P... 161 6e-038
gb|CF663725.1|CF663725 RTCNT1_4_F05.g1_A029 Root control Pi... 161 6e-038
gb|DR057048.1|DR057048 RTNIT1_2_E07.b1_A029 Roots minus nit... 159 2e-037
gb|CO166309.1|CO166309 FLD1_61_B05.b1_A029 Root flooded Pin... 157 9e-037
gb|BF517782.1|BF517782 NXSI_031_B07_F NXSI (Nsf Xylem Side ... 155 3e-036
gb|DR111846.1|DR111846 RTS1_20_D08.g1_A029 Roots minus sulf... 155 3e-036
gb|BX666029.1|BX666029 BX666029 RN Pinus pinaster cDNA clon... 151 5e-035
gb|DR018654.1|DR018654 STRS1_24_F11.g1_A034 Shoot tip pitch... 147 8e-034
gb|CO166371.1|CO166371 FLD1_61_B05.g1_A029 Root flooded Pin... 145 3e-033
gb|AW064891.1|AW064891 ST37A12 Pine TriplEx shoot tip libra... 137 8e-031
gb|CO160883.1|CO160883 FLD1_25_F03.b1_A029 Root flooded Pin... 127 8e-028
gb|DR111771.1|DR111771 RTS1_20_D08.b1_A029 Roots minus sulf... 125 3e-027
gb|AW869889.1|AW869889 NXNV_122_F12_F Nsf Xylem Normal wood... 121 5e-026
gb|CO172615.1|CO172615 NDL1_30_G02.g1_A029 Needles control ... 121 5e-026
gb|CF390252.1|CF390252 RTDR2_18_H07.b1_A021 Loblolly pine r... 119 2e-025
gb|CF392630.1|CF392630 RTDR3_5_G03.b1_A022 Loblolly pine ro... 119 2e-025
gb|CF663444.1|CF663444 RTCNT1_2_H02.g1_A029 Root control Pi... 119 2e-025
gb|CO199417.1|CO199417 GEO2_1_B11.b1_A032 Root gravitropism... 119 2e-025
gb|DR098693.1|DR098693 STRR1_47_F08.b1_A033 Stem Response R... 119 2e-025
gb|CF396600.1|CF396600 RTDS2_23_G03.b1_A021 Drought-stresse... 117 7e-025
gb|CF388201.1|CF388201 RTDR2_1_A04.g1_A021 Loblolly pine ro... 111 5e-023
gb|CO172603.1|CO172603 NDL1_30_F02.g1_A029 Needles control ... 111 5e-023
gb|CO368914.1|CO368914 RTK1_43_E05.g1_A029 Roots minus pota... 111 5e-023
gb|CX714188.1|CX714188 RTPQ1_18_H05.g1_A032 Roots treated w... 111 5e-023
gb|DR025376.1|DR025376 STRS1_71_F08.b1_A034 Shoot tip pitch... 111 5e-023
gb|DR054692.1|DR054692 RTCA1_18_H11.g1_A029 Roots minus cal... 111 5e-023
gb|DR055912.1|DR055912 RTCA1_26_F10.g1_A029 Roots minus cal... 111 5e-023
gb|DR080526.1|DR080526 RTFEPL1_23_G06.b1_A029 Roots plus ad... 111 5e-023
gb|DR101603.1|DR101603 STRR1_74_B07.g1_A033 Stem Response R... 111 5e-023
gb|DR101538.1|DR101538 STRR1_74_B07.b1_A033 Stem Response R... 109 2e-022
gb|DR018516.1|DR018516 STRS1_23_C11.g1_A034 Shoot tip pitch... 107 7e-022
gb|BX784176.1|BX784176 BX784176 Pinus pinaster differenciat... 103 1e-020
gb|DR052091.1|DR052091 RTCA1_2_H04.b1_A029 Roots minus calc... 103 1e-020
gb|DR052172.1|DR052172 RTCA1_2_H04.g1_A029 Roots minus calc... 103 1e-020
gb|DR068593.1|DR068593 RTDK1_1_E12.g1_A029 Roots, dark Pinu... 103 1e-020
gb|DR069842.1|DR069842 RTDK1_9_F05.g1_A029 Roots, dark Pinu... 103 1e-020
gb|DN633330.1|DN633330 EST984146 Subtracted pine embryo lib... 100 2e-019
gb|AA556289.1|AA556289 144 Loblolly pine N Pinus taeda cDNA... 98 7e-019
gb|DN613096.1|DN613096 EST966146 Subtracted pine embryo lib... 98 7e-019
gb|DN613206.1|DN613206 EST966256 Subtracted pine embryo lib... 98 7e-019
gb|DT628670.1|DT628670 EST1155240 Subtracted pine embryo li... 98 7e-019
gb|AW042953.1|AW042953 ST27E04 Pine TriplEx shoot tip libra... 96 3e-018
gb|CV033869.1|CV033869 RTNACL1_37_D01.b1_A029 Roots plus ad... 96 3e-018
gb|CV033949.1|CV033949 RTNACL1_37_D01.g1_A029 Roots plus ad... 96 3e-018
gb|DR048775.1|DR048775 RTBOR1_11_E03.b1_A029 Roots plus add... 96 3e-018
gb|BQ654503.1|BQ654503 NXRV081_B04_F NXRV (Nsf Xylem Root w... 94 1e-017
gb|BF609708.1|BF609708 NXSI_048_D09_F NXSI (Nsf Xylem Side ... 92 4e-017
gb|BM427931.1|BM427931 NXRV_006_D07_F NXRV (Nsf Xylem Root ... 90 2e-016
gb|DR069757.1|DR069757 RTDK1_9_F05.b1_A029 Roots, dark Pinu... 90 2e-016
gb|AI725349.1|AI725349 1215 PtIFG2 Pinus taeda cDNA clone 9... 88 7e-016
gb|BF777389.1|BF777389 NXSI_071_A07_F NXSI (Nsf Xylem Side ... 84 1e-014
gb|DR054602.1|DR054602 RTCA1_18_H11.b1_A029 Roots minus cal... 84 1e-014
gb|DR018598.1|DR018598 STRS1_24_F11.b1_A034 Shoot tip pitch... 82 4e-014
gb|AW289858.1|AW289858 NXNV007A06F Nsf Xylem Normal wood Ve... 80 2e-013
gb|CD026515.1|CD026515 NXNV007A06 Nsf Xylem Normal wood Ver... 80 2e-013
gb|CF391228.1|CF391228 RTDR3_4_A12.g1_A022 Loblolly pine ro... 80 2e-013
gb|CF479592.1|CF479592 RTWW3_11_G07.b1_A022 Well-watered lo... 80 2e-013
gb|CX714145.1|CX714145 RTPQ1_18_H05.b1_A032 Roots treated w... 80 2e-013
gb|DR025465.1|DR025465 STRS1_71_F08.g1_A034 Shoot tip pitch... 80 2e-013
gb|DR098834.1|DR098834 STRR1_48_D12.b1_A033 Stem Response R... 80 2e-013
gb|CF478144.1|CF478144 RTWW3_19_G10.b1_A022 Well-watered lo... 78 6e-013
gb|BX250564.1|BX250564 BX250564 Pinus pinaster differenciat... 76 3e-012
gb|BX682392.2|BX682392 BX682392 Pinus pinaster differenciat... 76 3e-012
gb|CO172362.1|CO172362 NDL1_29_F06.b1_A029 Needles control ... 76 3e-012
gb|CO369374.1|CO369374 RTK1_46_E05.g1_A029 Roots minus pota... 76 3e-012
gb|DR048854.1|DR048854 RTBOR1_11_E03.g1_A029 Roots plus add... 76 3e-012
gb|DR055841.1|DR055841 RTCA1_26_F10.b1_A029 Roots minus cal... 72 4e-011
gb|AW698182.1|AW698182 NXNV_074_D02_F Nsf Xylem Normal wood... 70 2e-010
gb|DR050824.1|DR050824 RTBOR1_25_H06.g1_A029 Roots plus add... 68 6e-010
gb|DR054529.1|DR054529 RTCA1_17_H11.g1_A029 Roots minus cal... 68 6e-010
gb|BG832743.1|BG832743 NXPV_079_C02_F NXPV (Nsf Xylem Plani... 66 2e-009
gb|BM158596.1|BM158596 NXLV_036_F10_F NXLV (Nsf Xylem Late ... 62 4e-008
gb|CF388134.1|CF388134 RTDR2_1_A04.b1_A021 Loblolly pine ro... 62 4e-008
gb|CF476089.1|CF476089 RTWW2_21_B05.b1_A021 Well-watered lo... 62 4e-008
gb|CF669946.1|CF669946 RTCNT1_47_C08.b1_A029 Root control P... 62 4e-008
gb|CO172957.1|CO172957 NDL1_33_A12.b1_A029 Needles control ... 62 4e-008
gb|DR111303.1|DR111303 RTS1_16_F05.g1_A029 Roots minus sulf... 62 4e-008
gb|BQ198452.1|BQ198452 NXLV131_C03_F NXLV (Nsf Xylem Late w... 60 2e-007
gb|DR068504.1|DR068504 RTDK1_1_E12.b1_A029 Roots, dark Pinu... 58 6e-007
gb|AA739766.1|AA739766 531 PtIFG2 Pinus taeda cDNA clone 88... 56 2e-006
gb|BX000624.1|BX000624 BX000624 Pinus pinaster xylem Pinus ... 54 9e-006
gb|BE657004.1|BE657004 NXCI_046_C06_F NXCI (Nsf Xylem Compr... 54 9e-006
gb|BM158932.1|BM158932 NXLV_041_E11_F NXLV (Nsf Xylem Late ... 54 9e-006
gb|BQ698151.1|BQ698151 NXPV_067_B03_F NXPV (Nsf Xylem Plani... 54 9e-006
gb|AW225721.1|AW225721 ST71A10 Pine TriplEx shoot tip libra... 52 4e-005
gb|CD021375.1|CD021375 NXNV_142_H02_F Nsf Xylem Normal wood... 50 1e-004
gb|BQ698231.1|BQ698231 NXPV_065_A06_F NXPV (Nsf Xylem Plani... 48 6e-004
gb|DR055799.1|DR055799 RTCA1_26_A12.b1_A029 Roots minus cal... 46 0.002
gb|BG039013.1|BG039013 NXSI_024_E08_F NXSI (Nsf Xylem Side ... 42 0.035
gb|AW010531.1|AW010531 ST07H04 Pine TriplEx shoot tip libra... 40 0.14
gb|AW042726.1|AW042726 ST24F08 Pine TriplEx shoot tip libra... 40 0.14
gb|AW289886.1|AW289886 NXNV007E08F Nsf Xylem Normal wood Ve... 40 0.14
gb|AW289924.1|AW289924 NXNV007D08F Nsf Xylem Normal wood Ve... 40 0.14
gb|AW289980.1|AW289980 NXNV009A06F Nsf Xylem Normal wood Ve... 40 0.14
gb|AL750419.1|AL750419 AL750419 RN Pinus pinaster cDNA clon... 40 0.14
gb|AL751065.1|AL751065 AL751065 RS Pinus pinaster cDNA clon... 40 0.14
gb|AL751252.1|AL751252 AL751252 RS Pinus pinaster cDNA clon... 40 0.14
gb|BX255770.1|BX255770 BX255770 Pinus pinaster differenciat... 40 0.14
gb|BE186994.1|BE186994 NXNV_157_D03_F Nsf Xylem Normal wood... 40 0.14
gb|BE241376.1|BE241376 NXNV_187_D12_F Nsf Xylem Normal wood... 40 0.14
gb|BE643866.1|BE643866 NXCI_048_C07_F NXCI (Nsf Xylem Compr... 40 0.14
gb|BM133242.1|BM133242 NXLV_003_C06_F NXLV (Nsf Xylem Late ... 40 0.14
gb|BM133806.1|BM133806 NXLV_012_E06_F NXLV (Nsf Xylem Late ... 40 0.14
gb|BM133807.1|BM133807 NXLV_012_E07_F NXLV (Nsf Xylem Late ... 40 0.14
gb|BM367287.1|BM367287 NXLV_047_B12_F NXLV (Nsf Xylem Late ... 40 0.14
gb|BQ198064.1|BQ198064 NXLV125_A10_F NXLV (Nsf Xylem Late w... 40 0.14
gb|BQ655301.1|BQ655301 NXRV092_F08_F NXRV (Nsf Xylem Root w... 40 0.14
gb|BQ702310.1|BQ702310 NXSI_127_C05_F NXSI (Nsf Xylem Side ... 40 0.14
gb|CD026548.1|CD026548 NXNV007D08 Nsf Xylem Normal wood Ver... 40 0.14
gb|CD026559.1|CD026559 NXNV007E08 Nsf Xylem Normal wood Ver... 40 0.14
gb|CD026639.1|CD026639 NXNV009A06 Nsf Xylem Normal wood Ver... 40 0.14
gb|CF389006.1|CF389006 RTDR2_13_D05.b1_A021 Loblolly pine r... 40 0.14
gb|CF389392.1|CF389392 RTDR2_7_A02.b1_A021 Loblolly pine ro... 40 0.14
gb|CF389418.1|CF389418 RTDR2_7_A02.g1_A021 Loblolly pine ro... 40 0.14
gb|CF389442.1|CF389442 RTDR2_7_A04.g1_A021 Loblolly pine ro... 40 0.14
gb|CF390285.1|CF390285 RTDR2_18_G01.g1_A021 Loblolly pine r... 40 0.14
gb|CF390772.1|CF390772 RTDR2_17_H02.g1_A021 Loblolly pine r... 40 0.14
gb|CF391576.1|CF391576 RTDR3_9_H12.g1_A022 Loblolly pine ro... 40 0.14
gb|CF392104.1|CF392104 RTDR3_12_F04.g1_A022 Loblolly pine r... 40 0.14
gb|CF399368.1|CF399368 RTDS3_28_G05.b1_A022 Drought-stresse... 40 0.14
gb|CF399441.1|CF399441 RTDS3_28_G05.g1_A022 Drought-stresse... 40 0.14
gb|CF477054.1|CF477054 RTWW3_5_H10.g1_A022 Well-watered lob... 40 0.14
gb|CF478323.1|CF478323 RTWW3_18_D01.b1_A022 Well-watered lo... 40 0.14
gb|CF478380.1|CF478380 RTWW3_18_D01.g1_A022 Well-watered lo... 40 0.14
gb|CF667409.1|CF667409 RTCNT1_30_C04.b1_A029 Root control P... 40 0.14
gb|CF667479.1|CF667479 RTCNT1_30_C04.g1_A029 Root control P... 40 0.14
gb|CF668380.1|CF668380 RTCNT1_36_D06.b1_A029 Root control P... 40 0.14
gb|CF668463.1|CF668463 RTCNT1_36_D06.g1_A029 Root control P... 40 0.14
gb|CR392578.1|CR392578 CR392578 RN Pinus pinaster cDNA clon... 40 0.14
gb|CO163119.1|CO163119 FLD1_39_C06.g1_A029 Root flooded Pin... 40 0.14
gb|CO364201.1|CO364201 RTK1_14_G06.b1_A029 Roots minus pota... 40 0.14
gb|CO364515.1|CO364515 RTK1_16_D10.b1_A029 Roots minus pota... 40 0.14
gb|CO364595.1|CO364595 RTK1_16_D10.g1_A029 Roots minus pota... 40 0.14
gb|CO364836.1|CO364836 RTK1_22_C08.b1_A029 Roots minus pota... 40 0.14
gb|CO368499.1|CO368499 RTK1_41_B01.b1_A029 Roots minus pota... 40 0.14
gb|CO368574.1|CO368574 RTK1_41_B01.g1_A029 Roots minus pota... 40 0.14
gb|CO370248.1|CO370248 RTK1_66_D01.g1_A029 Roots minus pota... 40 0.14
gb|CV032796.1|CV032796 RTNACL1_18_H10.b1_A029 Roots plus ad... 40 0.14
gb|CV032885.1|CV032885 RTNACL1_18_H10.g1_A029 Roots plus ad... 40 0.14
gb|CV033491.1|CV033491 RTNACL1_34_G10.g1_A029 Roots plus ad... 40 0.14
gb|CX647028.1|CX647028 COLD1_13_B06.b1_A029 Root cold Pinus... 40 0.14
gb|CX647097.1|CX647097 COLD1_13_B06.g1_A029 Root cold Pinus... 40 0.14
gb|CX647151.1|CX647151 COLD1_14_A02.b1_A029 Root cold Pinus... 40 0.14
gb|CX647178.1|CX647178 COLD1_14_D03.b1_A029 Root cold Pinus... 40 0.14
gb|CX649005.1|CX649005 COLD1_32_G09.b1_A029 Root cold Pinus... 40 0.14
gb|CX649079.1|CX649079 COLD1_32_G09.g1_A029 Root cold Pinus... 40 0.14
gb|CX649913.1|CX649913 COLD1_42_F11.b1_A029 Root cold Pinus... 40 0.14
gb|CX649989.1|CX649989 COLD1_42_F11.g1_A029 Root cold Pinus... 40 0.14
gb|CX650487.1|CX650487 COLD1_46_B11.b1_A029 Root cold Pinus... 40 0.14
gb|CX650559.1|CX650559 COLD1_46_B11.g1_A029 Root cold Pinus... 40 0.14
gb|CX650649.1|CX650649 COLD1_47_D09.b1_A029 Root cold Pinus... 40 0.14
gb|CX650717.1|CX650717 COLD1_47_D09.g1_A029 Root cold Pinus... 40 0.14
gb|CX651538.1|CX651538 COLD1_53_C05.b1_A029 Root cold Pinus... 40 0.14
gb|CX651602.1|CX651602 COLD1_53_C01.g1_A029 Root cold Pinus... 40 0.14
gb|CX651606.1|CX651606 COLD1_53_C05.g1_A029 Root cold Pinus... 40 0.14
gb|CX651750.1|CX651750 COLD1_54_C01.g1_A029 Root cold Pinus... 40 0.14
gb|CX652286.1|CX652286 COLD1_58_D09.b1_A029 Root cold Pinus... 40 0.14
gb|CX652373.1|CX652373 COLD1_58_D09.g1_A029 Root cold Pinus... 40 0.14
gb|CX652503.1|CX652503 COLD1_59_B09.g1_A029 Root cold Pinus... 40 0.14
gb|DR014493.1|DR014493 HEAT1_49_G07.g1_A029 Root at 37 C fo... 40 0.14
gb|DR019013.1|DR019013 STRS1_27_F12.b1_A034 Shoot tip pitch... 40 0.14
gb|DR019097.1|DR019097 STRS1_27_F12.g1_A034 Shoot tip pitch... 40 0.14
gb|DR047569.1|DR047569 RTBOR1_2_A11.b1_A029 Roots plus adde... 40 0.14
gb|DR051159.1|DR051159 RTBOR1_28_C05.b1_A029 Roots plus add... 40 0.14
gb|DR055327.1|DR055327 RTCA1_23_A09.b1_A029 Roots minus cal... 40 0.14
gb|DR056622.1|DR056622 RTCA1_31_B05.g1_A029 Roots minus cal... 40 0.14
gb|DR056869.1|DR056869 RTNIT1_1_C06.b1_A029 Roots minus nit... 40 0.14
gb|DR059846.1|DR059846 RTNIT1_20_D08.b1_A029 Roots minus ni... 40 0.14
gb|DR059932.1|DR059932 RTNIT1_20_D08.g1_A029 Roots minus ni... 40 0.14
gb|DR069123.1|DR069123 RTDK1_5_C04.b1_A029 Roots, dark Pinu... 40 0.14
gb|DR069199.1|DR069199 RTDK1_5_C04.g1_A029 Roots, dark Pinu... 40 0.14
gb|DR078968.1|DR078968 RTFEPL1_8_D04.b1_A029 Roots plus add... 40 0.14
gb|DR079046.1|DR079046 RTFEPL1_8_D04.g1_A029 Roots plus add... 40 0.14
gb|DR080951.1|DR080951 RTFEPL1_26_G12.b1_A029 Roots plus ad... 40 0.14
gb|DR081027.1|DR081027 RTFEPL1_26_G12.g1_A029 Roots plus ad... 40 0.14
gb|DR089048.1|DR089048 RTAL1_6_F02.b1_A029 Roots plus added... 40 0.14
gb|DR089133.1|DR089133 RTAL1_6_F02.g1_A029 Roots plus added... 40 0.14
gb|DR090439.1|DR090439 RTAL1_15_C01.b1_A029 Roots plus adde... 40 0.14
gb|DR090507.1|DR090507 RTAL1_15_C01.g1_A029 Roots plus adde... 40 0.14
gb|DR100975.1|DR100975 STRR1_69_D11.g1_A033 Stem Response R... 40 0.14
gb|DR110458.1|DR110458 RTS1_11_B07.b1_A029 Roots minus sulf... 40 0.14
gb|DR110544.1|DR110544 RTS1_11_B07.g1_A029 Roots minus sulf... 40 0.14
gb|DR112994.1|DR112994 RTS1_32_E06.b1_A029 Roots minus sulf... 40 0.14
gb|DR163690.1|DR163690 RTFE1_44_H04.b1_A029 Roots minus iro... 40 0.14
gb|DR163779.1|DR163779 RTFE1_44_H04.g1_A029 Roots minus iro... 40 0.14
gb|DR166452.1|DR166452 RTPHOS1_12_C03.b2_A029 Roots minus p... 40 0.14
gb|DR169234.1|DR169234 RTPHOS1_31_A07.b1_A029 Roots minus p... 40 0.14
gb|DR169301.1|DR169301 RTPHOS1_31_A07.g1_A029 Roots minus p... 40 0.14
gb|DR682817.1|DR682817 EST1072892 Normalized pine embryo li... 40 0.14
gb|DR743602.1|DR743602 RTCU1_17_A09.b1_A029 Roots plus adde... 40 0.14
gb|DT631173.1|DT631173 EST1146104 Normalized pine embryo li... 40 0.14
gb|AF461687.1| Pinus pinaster putative ubiquitin mRNA, part... 40 0.14
>gb|DN632011.1|DN632011 EST982827 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTACI37, mRNA sequence
Length = 808
Score = 212 bits (107), Expect = 2e-053
Identities = 368/455 (80%)
Strand = Plus / Minus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| || ||||||||
Sbjct: 735 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcctactcagcgag 676
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 675 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 616
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 615 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 556
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 555 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 496
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 495 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 436
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 435 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 376
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 375 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 316
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 315 acagccaaggaatggacaagactttatgcaagtgg 281
>gb|CF390333.1|CF390333 RTDR2_18_H07.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_18_H07_A021 5', mRNA
sequence
Length = 732
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 143 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 202
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 203 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 262
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 263 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 322
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 323 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 382
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 383 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 442
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 443 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 502
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 503 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 562
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 563 acagccaaggaatggacaagactttatgcaagtgg 597
>gb|CF390646.1|CF390646 RTDR2_20_A10.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_20_A10_A021 5', mRNA
sequence
Length = 795
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 138 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 197
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 198 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 257
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 258 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 317
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 318 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 377
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 378 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 437
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 438 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 497
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 498 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 557
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 558 acagccaaggaatggacaagactttatgcaagtgg 592
>gb|CF392858.1|CF392858 RTDR3_19_B12.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_19_B12_A022 5', mRNA
sequence
Length = 734
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 185 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 244
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 245 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 304
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 305 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 364
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 365 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 424
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 425 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 484
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 485 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 544
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 545 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 604
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 605 acagccaaggaatggacaagactttatgcaagtgg 639
>gb|CF394590.1|CF394590 RTDS2_6_F03.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_6_F03_A021 5', mRNA sequence
Length = 735
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 148 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 207
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 208 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 267
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 268 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 327
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 328 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 387
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 388 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 447
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 448 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 507
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 508 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 567
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 568 acagccaaggaatggacaagactttatgcaagtgg 602
>gb|CF471162.1|CF471162 RTDS1_16_G01.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_16_G01_A015 5', mRNA sequence
Length = 711
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 148 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 207
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 208 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 267
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 268 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 327
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 328 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 387
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 388 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 447
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 448 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 507
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 508 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 567
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 568 acagccaaggaatggacaagactttatgcaagtgg 602
>gb|CF471914.1|CF471914 RTDS1_7_A07.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_7_A07_A015 5', mRNA sequence
Length = 796
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 125 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 184
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 185 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 244
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 245 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 304
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 305 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 364
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 365 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 424
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 425 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 484
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 485 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 544
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 545 acagccaaggaatggacaagactttatgcaagtgg 579
>gb|CF474453.1|CF474453 RTWW2_20_G08.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_20_G08_A021 5', mRNA sequence
Length = 713
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 126 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 185
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 186 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 245
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 246 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 305
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 306 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 365
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 366 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 425
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 426 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 485
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 486 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 545
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 546 acagccaaggaatggacaagactttatgcaagtgg 580
>gb|CF474564.1|CF474564 RTWW2_9_F07.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_9_F07_A021 5', mRNA sequence
Length = 724
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 143 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 202
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 203 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 262
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 263 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 322
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 323 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 382
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 383 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 442
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 443 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 502
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 503 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 562
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 563 acagccaaggaatggacaagactttatgcaagtgg 597
>gb|CF476203.1|CF476203 RTWW2_21_B05.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_21_B05_A021 5', mRNA sequence
Length = 725
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 166 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 225
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 226 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 285
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 286 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 345
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 346 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 405
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 406 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 465
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 466 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 525
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 526 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 585
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 586 acagccaaggaatggacaagactttatgcaagtgg 620
>gb|CF478197.1|CF478197 RTWW3_19_G10.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_19_G10_A022 5', mRNA sequence
Length = 785
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 109 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 168
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 169 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 228
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 229 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 288
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 289 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 348
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 349 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 408
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 409 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 468
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 469 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 528
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 529 acagccaaggaatggacaagactttatgcaagtgg 563
>gb|CF479658.1|CF479658 RTWW3_11_G07.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_11_G07_A022 5', mRNA sequence
Length = 795
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 96 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 155
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 156 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 215
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 216 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 275
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 276 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 335
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 336 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 395
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 396 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 455
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 456 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 515
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 516 acagccaaggaatggacaagactttatgcaagtgg 550
>gb|CF670017.1|CF670017 RTCNT1_47_C08.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_47_C08_A029 5', mRNA sequence
Length = 824
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 125 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 184
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 185 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 244
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 245 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 304
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 305 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 364
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 365 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 424
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 425 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 484
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 485 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 544
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 545 acagccaaggaatggacaagactttatgcaagtgg 579
>gb|CF671674.1|CF671674 RTCNT1_58_C05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_58_C05_A029 5', mRNA sequence
Length = 795
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 118 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 177
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 178 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 237
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 238 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 297
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 298 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 357
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 358 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 417
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 418 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 477
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 478 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 537
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 538 acagccaaggaatggacaagactttatgcaagtgg 572
>gb|CO159768.1|CO159768 FLD1_15_F02.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_15_F02_A029 5', mRNA sequence
Length = 854
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 178 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 237
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 238 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 297
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 298 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 357
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 358 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 417
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 418 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 477
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 478 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 537
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 538 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 597
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 598 acagccaaggaatggacaagactttatgcaagtgg 632
>gb|CO160965.1|CO160965 FLD1_25_F03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_25_F03_A029 5', mRNA sequence
Length = 869
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 157 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 216
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 217 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 276
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 277 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 336
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 337 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 396
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 397 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 456
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 457 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 516
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 517 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 576
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 577 acagccaaggaatggacaagactttatgcaagtgg 611
>gb|CO161236.1|CO161236 FLD1_27_B02.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_27_B02_A029 5', mRNA sequence
Length = 901
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 54 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 113
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 114 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 173
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 174 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 233
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 234 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 293
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 294 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 353
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 354 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 413
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 414 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 473
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 474 acagccaaggaatggacaagactttatgcaagtgg 508
>gb|CO163592.1|CO163592 FLD1_42_C08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_42_C08_A029 5', mRNA sequence
Length = 865
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 116 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 175
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 176 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 235
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 236 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 295
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 296 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 355
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 356 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 415
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 416 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 475
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 476 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 535
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 536 acagccaaggaatggacaagactttatgcaagtgg 570
>gb|CO172518.1|CO172518 NDL1_30_F02.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_30_F02_A029 3', mRNA sequence
Length = 682
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Minus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 540 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 481
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 480 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 421
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 420 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 361
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 360 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 301
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 300 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 241
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 240 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 181
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 180 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 121
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 120 acagccaaggaatggacaagactttatgcaagtgg 86
>gb|CO172528.1|CO172528 NDL1_30_G02.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_30_G02_A029 3', mRNA sequence
Length = 694
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Minus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 552 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 493
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 492 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 433
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 432 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 373
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 372 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 313
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 312 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 253
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 252 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 193
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 192 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 133
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 132 acagccaaggaatggacaagactttatgcaagtgg 98
>gb|CO173019.1|CO173019 NDL1_33_A12.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_33_A12_A029 5', mRNA sequence
Length = 712
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 127 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 186
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 187 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 246
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 247 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 306
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 307 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 366
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 367 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 426
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 427 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 486
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 487 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 546
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 547 acagccaaggaatggacaagactttatgcaagtgg 581
>gb|CO199485.1|CO199485 GEO2_1_B11.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_1_B11_A032 5', mRNA sequence
Length = 719
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 103 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 162
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 163 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 222
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 223 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 282
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 283 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 342
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 343 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 402
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 403 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 462
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 463 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 522
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 523 acagccaaggaatggacaagactttatgcaagtgg 557
>gb|CO362025.1|CO362025 NDL2_8_D09.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_8_D09_A029 5', mRNA sequence
Length = 787
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 108 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 167
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 168 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 227
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 228 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 287
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 288 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 347
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 348 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 407
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 408 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 467
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 468 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 527
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 528 acagccaaggaatggacaagactttatgcaagtgg 562
>gb|CO369623.1|CO369623 RTK1_48_H05.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_48_H05_A029 3', mRNA sequence
Length = 831
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 9 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 68
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 69 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 128
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 129 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 188
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 189 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 248
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 249 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 308
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 309 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 368
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 369 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 428
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 429 acagccaaggaatggacaagactttatgcaagtgg 463
>gb|CO369704.1|CO369704 RTK1_48_H05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_48_H05_A029 5', mRNA sequence
Length = 727
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 126 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 185
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 186 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 245
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 246 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 305
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 306 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 365
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 366 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 425
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 426 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 485
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 486 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 545
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 546 acagccaaggaatggacaagactttatgcaagtgg 580
>gb|CX650465.1|CX650465 COLD1_45_H01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_45_H01_A029 5', mRNA sequence
Length = 832
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Minus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 812 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 753
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 752 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 693
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 692 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 633
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 632 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 573
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 572 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 513
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 512 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 453
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 452 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 393
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 392 acagccaaggaatggacaagactttatgcaagtgg 358
>gb|DN453990.1|DN453990 EST949789 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIFY73 5' end, mRNA sequence
Length = 880
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 131 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 190
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 191 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 250
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 251 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 310
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 311 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 370
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 371 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 430
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 431 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 490
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 491 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 550
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 551 acagccaaggaatggacaagactttatgcaagtgg 585
>gb|DN629517.1|DN629517 EST980333 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTABG06, mRNA sequence
Length = 766
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 132 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 191
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 192 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 251
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 252 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 311
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 312 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 371
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 372 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 431
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 432 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcccgat 491
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 492 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 551
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 552 acagccaaggaatggacaagactttatgcaagtgg 586
>gb|DR015001.1|DR015001 HEAT1_52_H07.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_52_H07_A029 5', mRNA sequence
Length = 841
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 127 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 186
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 187 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 246
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 247 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 306
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 307 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 366
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 367 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 426
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 427 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 486
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 487 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 546
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 547 acagccaaggaatggacaagactttatgcaagtgg 581
>gb|DR050737.1|DR050737 RTBOR1_25_H06.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_25_H06_A029 3', mRNA sequence
Length = 881
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Minus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 742 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 683
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 682 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 623
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 622 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 563
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 562 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 503
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 502 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 443
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 442 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 383
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 382 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 323
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 322 acagccaaggaatggacaagactttatgcaagtgg 288
>gb|DR051022.1|DR051022 RTBOR1_27_E03.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_27_E03_A029 3', mRNA sequence
Length = 849
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Minus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 714 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 655
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 654 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 595
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 594 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 535
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 534 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 475
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 474 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 415
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 414 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 355
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 354 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 295
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 294 acagccaaggaatggacaagactttatgcaagtgg 260
>gb|DR051825.1|DR051825 RTBOR1_32_D07.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_32_D07_A029 5', mRNA sequence
Length = 685
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 124 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 183
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 184 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 243
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 244 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 303
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 304 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 363
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 364 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 423
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 424 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 483
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 484 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 543
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 544 acagccaaggaatggacaagactttatgcaagtgg 578
>gb|DR069352.1|DR069352 RTDK1_6_E09.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_6_E09_A029 5', mRNA sequence
Length = 863
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Minus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 702 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 643
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 642 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 583
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 582 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 523
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 522 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 463
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 462 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 403
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 402 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 343
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 342 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 283
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 282 acagccaaggaatggacaagactttatgcaagtgg 248
>gb|DR070016.1|DR070016 RTDK1_10_F07.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_10_F07_A029 5', mRNA sequence
Length = 690
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 108 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 167
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 168 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 227
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 228 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 287
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 288 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 347
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 348 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 407
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 408 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 467
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 468 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 527
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 528 acagccaaggaatggacaagactttatgcaagtgg 562
>gb|DR071865.1|DR071865 RTDK1_22_C05.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_22_C05_A029 5', mRNA sequence
Length = 716
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 157 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 216
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 217 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 276
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 277 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 336
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 337 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 396
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 397 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 456
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 457 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 516
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 517 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 576
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 577 acagccaaggaatggacaagactttatgcaagtgg 611
>gb|DR080599.1|DR080599 RTFEPL1_23_G06.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_23_G06_A029 5', mRNA sequence
Length = 655
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 126 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 185
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 186 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 245
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 246 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 305
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 306 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 365
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 366 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 425
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 426 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 485
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 486 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 545
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 546 acagccaaggaatggacaagactttatgcaagtgg 580
>gb|DR092849.1|DR092849 STRR1_4_A03.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_4_A03_A033 5', mRNA sequence
Length = 870
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 128 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 187
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 188 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 247
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 248 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 307
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 308 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 367
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 368 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 427
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 428 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 487
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 488 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 547
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 548 acagccaaggaatggacaagactttatgcaagtgg 582
>gb|DR095701.1|DR095701 STRR1_23_B08.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_23_B08_A033 3', mRNA sequence
Length = 787
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 55 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 114
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 115 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 174
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 175 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 234
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 235 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 294
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 295 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 354
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 355 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 414
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 415 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 474
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 475 acagccaaggaatggacaagactttatgcaagtgg 509
>gb|DR095772.1|DR095772 STRR1_23_B08.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_23_B08_A033 5', mRNA sequence
Length = 773
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 146 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 205
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 206 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 265
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 266 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 325
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 326 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 385
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 386 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 445
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 446 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 505
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 506 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 565
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 566 acagccaaggaatggacaagactttatgcaagtgg 600
>gb|DR096537.1|DR096537 STRR1_28_D02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_28_D02_A033 5', mRNA sequence
Length = 826
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 282 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 341
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 342 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 401
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 402 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 461
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 462 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 521
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 522 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 581
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 582 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 641
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 642 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 701
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 702 acagccaaggaatggacaagactttatgcaagtgg 736
>gb|DR098906.1|DR098906 STRR1_48_D12.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_48_D12_A033 5', mRNA sequence
Length = 712
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 69 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 128
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 129 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 188
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 189 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 248
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 249 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 308
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 309 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 368
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 369 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 428
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 429 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 488
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 489 acagccaaggaatggacaagactttatgcaagtgg 523
>gb|DR118368.1|DR118368 RTMG1_12_G11.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_12_G11_A029 5', mRNA sequence
Length = 689
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 108 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 167
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 168 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 227
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 228 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 287
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 288 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 347
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 348 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 407
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 408 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 467
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 468 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 527
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 528 acagccaaggaatggacaagactttatgcaagtgg 562
>gb|DR165215.1|DR165215 RTPHOS1_3_A06.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_3_A06_A029 5', mRNA sequence
Length = 730
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 173 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 232
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 233 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 292
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 293 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 352
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 353 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 412
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 413 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 472
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 473 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 532
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 533 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 592
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 593 acagccaaggaatggacaagactttatgcaagtgg 627
>gb|DR180620.1|DR180620 RTMNUT1_33_F07.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_33_F07_A029 5', mRNA sequence
Length = 814
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 104 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 163
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 164 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 223
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 224 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 283
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 284 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 343
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 344 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 403
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 404 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 463
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 464 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 523
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 524 acagccaaggaatggacaagactttatgcaagtgg 558
>gb|DR180898.1|DR180898 RTMNUT1_35_C02.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_35_C02_A029 5', mRNA sequence
Length = 860
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 66 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 125
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 126 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 185
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 186 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 245
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 246 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 305
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 306 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 365
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 366 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 425
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 426 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 485
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 486 acagccaaggaatggacaagactttatgcaagtgg 520
>gb|DT625059.1|DT625059 EST1159334 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAL46 5' end, mRNA sequence
Length = 945
Score = 204 bits (103), Expect = 4e-051
Identities = 367/455 (80%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 131 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 190
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 191 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 250
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 251 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 310
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 311 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 370
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 371 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 430
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 431 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 490
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaagctgaagcttttgag 474
||||| || ||||| |||||||| |||||||||||| |||| |||| || ||| | ||
Sbjct: 491 gatccactttcagaaaacattgccaaacactggaaagcaaacgaagtcgaggctgtggaa 550
Query: 475 acagcgaaggagtggactcgcctgtatgcaagtgg 509
||||| ||||| ||||| | || |||||||||||
Sbjct: 551 acagccaaggaatggacaagactttatgcaagtgg 585
>gb|CO172443.1|CO172443 NDL1_29_F06.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_29_F06_A029 5', mRNA sequence
Length = 821
Score = 202 bits (102), Expect = 2e-050
Identities = 348/430 (80%)
Strand = Plus / Plus
Query: 80 gaatcatcaaggagacgcagcggctcctcagcgaaccagcgccggggattagcgcgtcgc 139
||||||||||||| || ||||| | |||||||| || || ||||| || || || || |
Sbjct: 9 gaatcatcaaggaaactcagcgcttactcagcgagccggccccgggaatcagtgcatctc 68
Query: 140 cgtcggaagagaacatgcggtacttcaatgtcatgatccttggccccgcacagtcaccct 199
| || || || |||||||| ||||||||||| ||||| ||||| || | ||||| || |
Sbjct: 69 cctcagaggaaaacatgcgatacttcaatgtgatgattcttggacctactcagtctccat 128
Query: 200 atgaaggtggagttttcaagcttgagctattcttgcctgaggaatatccaatggctgccc 259
|||||||||| ||||||||||| ||||||||||| ||||| ||||||||||||||||| |
Sbjct: 129 atgaaggtggtgttttcaagctggagctattcttacctgaagaatatccaatggctgctc 188
Query: 260 cgaaagttaggtttctcaccaaaatttaccatccgaacattgacaagcttggtaggatat 319
| || || | ||| | || || || |||||||| || ||||||||||| ||| ||||||
Sbjct: 189 caaaggtccgatttttgacaaagatataccatccaaatattgacaagctaggtcggatat 248
Query: 320 gcctcgacattcttaaggacaaatggagtcccgctcttcagatacgtacagttctgctca 379
| || |||||||| ||||| |||||||| || |||||||| || || |||||| |||| |
Sbjct: 249 gtctagacattctaaaggataaatggagccctgctcttcaaattcgaacagttttgctga 308
Query: 380 gcattcaggcacttctgagtgccccaaatccagatgatcctctctcagacaacattgcga 439
|||| || ||| | ||||||| || ||||| |||||||| || ||||| |||||||| |
Sbjct: 309 gcatccaagcattgttgagtgctcccaatcctgatgatccactttcagaaaacattgcca 368
Query: 440 aacactggaaatcaaatgaagctgaagcttttgagacagcgaaggagtggactcgcctgt 499
||||||||||| |||| |||| || ||| | || ||||| ||||| ||||| | || |
Sbjct: 369 aacactggaaagcaaacgaagtcgaggctgtggaaacagccaaggaatggacaagacttt 428
Query: 500 atgcaagtgg 509
||||||||||
Sbjct: 429 atgcaagtgg 438
>gb|CO369294.1|CO369294 RTK1_46_E05.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_46_E05_A029 3', mRNA sequence
Length = 865
Score = 202 bits (102), Expect = 2e-050
Identities = 348/430 (80%)
Strand = Plus / Minus
Query: 80 gaatcatcaaggagacgcagcggctcctcagcgaaccagcgccggggattagcgcgtcgc 139
||||||||||||| || ||||| | |||||||| || || ||||| || || || || |
Sbjct: 691 gaatcatcaaggaaactcagcgcttactcagcgagccggccccgggaatcagtgcatctc 632
Query: 140 cgtcggaagagaacatgcggtacttcaatgtcatgatccttggccccgcacagtcaccct 199
| || || || |||||||| ||||||||||| ||||| ||||| || | ||||| || |
Sbjct: 631 cctcagaggaaaacatgcgatacttcaatgtgatgattcttggacctactcagtctccat 572
Query: 200 atgaaggtggagttttcaagcttgagctattcttgcctgaggaatatccaatggctgccc 259
|||||||||| ||||||||||| ||||||||||| ||||| ||||||||||||||||| |
Sbjct: 571 atgaaggtggtgttttcaagctggagctattcttacctgaagaatatccaatggctgctc 512
Query: 260 cgaaagttaggtttctcaccaaaatttaccatccgaacattgacaagcttggtaggatat 319
| || || | ||| | || || || |||||||| || ||||||||||| ||| ||||||
Sbjct: 511 caaaggtccgatttttgacaaagatataccatccaaatattgacaagctaggtcggatat 452
Query: 320 gcctcgacattcttaaggacaaatggagtcccgctcttcagatacgtacagttctgctca 379
| || |||||||| ||||| |||||||| || |||||||| || || |||||| |||| |
Sbjct: 451 gtctagacattctaaaggataaatggagccctgctcttcaaattcgaacagttttgctga 392
Query: 380 gcattcaggcacttctgagtgccccaaatccagatgatcctctctcagacaacattgcga 439
|||| || ||| | ||||||| || ||||| |||||||| || ||||| |||||||| |
Sbjct: 391 gcatccaagcattgttgagtgctcccaatcctgatgatccactttcagaaaacattgcca 332
Query: 440 aacactggaaatcaaatgaagctgaagcttttgagacagcgaaggagtggactcgcctgt 499
||||||||||| |||| |||| || ||| | || ||||| ||||| ||||| | || |
Sbjct: 331 aacactggaaagcaaacgaagtcgaggctgtggaaacagccaaggaatggacaagacttt 272
Query: 500 atgcaagtgg 509
||||||||||
Sbjct: 271 atgcaagtgg 262
>gb|CX649658.1|CX649658 COLD1_36_E02.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_36_E02_A029 5', mRNA sequence
Length = 507
Score = 202 bits (102), Expect = 2e-050
Identities = 330/406 (81%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 80 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 139
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 140 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 199
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 200 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 259
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 260 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 319
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 320 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 379
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 380 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 439
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaag 460
||||| || ||||| |||||||| |||||||||||| |||| ||||
Sbjct: 440 gatccactttcagaaaacattgccaaacactggaaagcaaacgaag 485
>gb|DR012151.1|DR012151 HEAT1_10_C06.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_10_C06_A029 5', mRNA sequence
Length = 530
Score = 202 bits (102), Expect = 2e-050
Identities = 330/406 (81%)
Strand = Plus / Plus
Query: 55 atggccaacagcaacctcccgcgccgaatcatcaaggagacgcagcggctcctcagcgaa 114
||||||||| ||| || || ||| ||||||||||||| || ||||| | ||||||||
Sbjct: 123 atggccaacgccaatctacctcgcagaatcatcaaggaaactcagcgcttactcagcgag 182
Query: 115 ccagcgccggggattagcgcgtcgccgtcggaagagaacatgcggtacttcaatgtcatg 174
|| || ||||| || || || || || || || || |||||||| ||||||||||| |||
Sbjct: 183 ccggccccgggaatcagtgcatctccctcagaggaaaacatgcgatacttcaatgtgatg 242
Query: 175 atccttggccccgcacagtcaccctatgaaggtggagttttcaagcttgagctattcttg 234
|| ||||| || | ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct: 243 attcttggacctactcagtctccatatgaaggtggtgttttcaagctggagctattctta 302
Query: 235 cctgaggaatatccaatggctgccccgaaagttaggtttctcaccaaaatttaccatccg 294
||||| ||||||||||||||||| || || || | ||| | || || || ||||||||
Sbjct: 303 cctgaagaatatccaatggctgctccaaaggtccgatttttgacaaagatataccatcca 362
Query: 295 aacattgacaagcttggtaggatatgcctcgacattcttaaggacaaatggagtcccgct 354
|| ||||||||||| ||| ||||||| || |||||||| ||||| |||||||| || |||
Sbjct: 363 aatattgacaagctaggtcggatatgtctagacattctaaaggataaatggagccctgct 422
Query: 355 cttcagatacgtacagttctgctcagcattcaggcacttctgagtgccccaaatccagat 414
||||| || || |||||| |||| ||||| || ||| | ||||||| || ||||| |||
Sbjct: 423 cttcaaattcgaacagttttgctgagcatccaagcattgttgagtgctcccaatcctgat 482
Query: 415 gatcctctctcagacaacattgcgaaacactggaaatcaaatgaag 460
||||| || ||||| |||||||| |||||||||||| |||| ||||
Sbjct: 483 gatccactttcagaaaacattgccaaacactggaaagcaaacgaag 528
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 84,591
Number of Sequences: 355925
Number of extensions: 84591
Number of successful extensions: 24247
Number of sequences better than 0.5: 288
Number of HSP's better than 0.5 without gapping: 288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 23784
Number of HSP's gapped (non-prelim): 449
length of query: 825
length of database: 217,277,237
effective HSP length: 19
effective length of query: 806
effective length of database: 210,514,662
effective search space: 169674817572
effective search space used: 169674817572
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)