BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3071103.2.1
(570 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO164452.1|CO164452 FLD1_48_C12.b1_A029 Root flooded Pin... 50 1e-004
gb|DR015271.1|DR015271 STRS1_2_B07.g1_A034 Shoot tip pitch ... 50 1e-004
gb|DR016972.1|DR016972 STRS1_13_F10.b1_A034 Shoot tip pitch... 50 1e-004
gb|DR022580.1|DR022580 STRS1_52_B11.b1_A034 Shoot tip pitch... 50 1e-004
gb|DR090290.1|DR090290 RTAL1_14_C02.b1_A029 Roots plus adde... 50 1e-004
gb|DR090362.1|DR090362 RTAL1_14_C02.g1_A029 Roots plus adde... 50 1e-004
gb|CO161962.1|CO161962 FLD1_32_F10.b1_A029 Root flooded Pin... 44 0.006
gb|CO162035.1|CO162035 FLD1_32_F10.g1_A029 Root flooded Pin... 44 0.006
gb|DR017154.1|DR017154 STRS1_14_H10.b1_A034 Shoot tip pitch... 44 0.006
gb|DR020189.1|DR020189 STRS1_35_F02.b1_A034 Shoot tip pitch... 44 0.006
gb|DR020265.1|DR020265 STRS1_35_F02.g1_A034 Shoot tip pitch... 44 0.006
gb|DR071605.1|DR071605 RTDK1_21_A07.b1_A029 Roots, dark Pin... 44 0.006
gb|BF778111.1|BF778111 NXSI_077_C06_F NXSI (Nsf Xylem Side ... 42 0.024
gb|BM133734.1|BM133734 NXLV_011_E04_F NXLV (Nsf Xylem Late ... 42 0.024
gb|CF387630.1|CF387630 RTDR1_19_H08.b1_A015 Loblolly pine r... 42 0.024
gb|CF387786.1|CF387786 RTDR1_18_H04.b1_A015 Loblolly pine r... 42 0.024
gb|CF388141.1|CF388141 RTDR2_1_H11.b1_A021 Loblolly pine ro... 42 0.024
gb|CF388211.1|CF388211 RTDR2_1_H11.g1_A021 Loblolly pine ro... 42 0.024
gb|CF395319.1|CF395319 RTDS2_11_D06.b1_A021 Drought-stresse... 42 0.024
gb|CF395470.1|CF395470 RTDS2_11_D06.g1_A021 Drought-stresse... 42 0.024
gb|CF395520.1|CF395520 RTDS2_12_H05.b1_A021 Drought-stresse... 42 0.024
gb|CF395564.1|CF395564 RTDS2_12_H05.g1_A021 Drought-stresse... 42 0.024
gb|CF395868.1|CF395868 RTDS2_19_D02.b1_A021 Drought-stresse... 42 0.024
gb|CF395919.1|CF395919 RTDS2_19_B08.g1_A021 Drought-stresse... 42 0.024
gb|CF396431.1|CF396431 RTDS2_22_E06.b1_A021 Drought-stresse... 42 0.024
gb|CF397664.1|CF397664 RTDS3_1_A06.b2_A022 Drought-stressed... 42 0.024
gb|CF398048.1|CF398048 RTDS3_22_E10.b1_A022 Drought-stresse... 42 0.024
gb|CF398531.1|CF398531 RTDS3_15_D12.b1_A022 Drought-stresse... 42 0.024
gb|CF399019.1|CF399019 RTDS3_9_G10.b1_A022 Drought-stressed... 42 0.024
gb|CF399075.1|CF399075 RTDS3_9_A04.b1_A022 Drought-stressed... 42 0.024
gb|CF399080.1|CF399080 RTDS3_9_D03.b1_A022 Drought-stressed... 42 0.024
gb|CF399164.1|CF399164 RTDS3_9_G10.g1_A022 Drought-stressed... 42 0.024
gb|CF471547.1|CF471547 RTDS1_4_A12.b1_A015 Drought-stressed... 42 0.024
gb|CF471658.1|CF471658 RTDS1_6_C09.b1_A015 Drought-stressed... 42 0.024
gb|CF471773.1|CF471773 RTDS1_6_C09.g1_A015 Drought-stressed... 42 0.024
gb|CF472136.1|CF472136 RTDS1_8_F04.g1_A015 Drought-stressed... 42 0.024
gb|CF668863.1|CF668863 RTCNT1_39_D06.b1_A029 Root control P... 42 0.024
gb|CR392715.1|CR392715 CR392715 RN Pinus pinaster cDNA clon... 42 0.024
gb|CO158329.1|CO158329 FLD1_6_E09.b1_A029 Root flooded Pinu... 42 0.024
gb|CO158408.1|CO158408 FLD1_6_E09.g1_A029 Root flooded Pinu... 42 0.024
gb|CO158755.1|CO158755 FLD1_9_C03.b1_A029 Root flooded Pinu... 42 0.024
gb|CO158832.1|CO158832 FLD1_9_C03.g1_A029 Root flooded Pinu... 42 0.024
gb|CO159100.1|CO159100 FLD1_11_G12.b1_A029 Root flooded Pin... 42 0.024
gb|CO159608.1|CO159608 FLD1_14_D10.g1_A029 Root flooded Pin... 42 0.024
gb|CO160085.1|CO160085 FLD1_18_F09.b1_A029 Root flooded Pin... 42 0.024
gb|CO160257.1|CO160257 FLD1_19_F10.g1_A029 Root flooded Pin... 42 0.024
gb|CO160278.1|CO160278 FLD1_20_A03.b1_A029 Root flooded Pin... 42 0.024
gb|CO160307.1|CO160307 FLD1_20_D05.b1_A029 Root flooded Pin... 42 0.024
gb|CO160353.1|CO160353 FLD1_20_A03.g1_A029 Root flooded Pin... 42 0.024
gb|CO160858.1|CO160858 FLD1_25_C09.b1_A029 Root flooded Pin... 42 0.024
gb|CO161156.1|CO161156 FLD1_27_B05.b1_A029 Root flooded Pin... 42 0.024
gb|CO161238.1|CO161238 FLD1_27_B05.g1_A029 Root flooded Pin... 42 0.024
gb|CO161358.1|CO161358 FLD1_28_F12.b1_A029 Root flooded Pin... 42 0.024
gb|CO161438.1|CO161438 FLD1_28_F12.g1_A029 Root flooded Pin... 42 0.024
gb|CO162087.1|CO162087 FLD1_33_D06.b1_A029 Root flooded Pin... 42 0.024
gb|CO162176.1|CO162176 FLD1_33_D06.g1_A029 Root flooded Pin... 42 0.024
gb|CO162232.1|CO162232 FLD1_34_B08.b1_A029 Root flooded Pin... 42 0.024
gb|CO162580.1|CO162580 FLD1_36_E10.b1_A029 Root flooded Pin... 42 0.024
gb|CO162740.1|CO162740 FLD1_37_E11.b1_A029 Root flooded Pin... 42 0.024
gb|CO163063.1|CO163063 FLD1_39_E12.b1_A029 Root flooded Pin... 42 0.024
gb|CO163143.1|CO163143 FLD1_39_E12.g1_A029 Root flooded Pin... 42 0.024
gb|CO163220.1|CO163220 FLD1_40_F01.b1_A029 Root flooded Pin... 42 0.024
gb|CO163303.1|CO163303 FLD1_40_F01.g1_A029 Root flooded Pin... 42 0.024
gb|CO163451.1|CO163451 FLD1_41_F05.g1_A029 Root flooded Pin... 42 0.024
gb|CO163744.1|CO163744 FLD1_43_B08.g1_A029 Root flooded Pin... 42 0.024
gb|CO164020.1|CO164020 FLD1_45_F12.b1_A029 Root flooded Pin... 42 0.024
gb|CO164024.1|CO164024 FLD1_45_G06.b1_A029 Root flooded Pin... 42 0.024
gb|CO164097.1|CO164097 FLD1_45_F12.g1_A029 Root flooded Pin... 42 0.024
gb|CO164101.1|CO164101 FLD1_45_G06.g1_A029 Root flooded Pin... 42 0.024
gb|CO164309.1|CO164309 FLD1_47_E02.b1_A029 Root flooded Pin... 42 0.024
gb|CO164523.1|CO164523 FLD1_48_C12.g1_A029 Root flooded Pin... 42 0.024
gb|CO164912.1|CO164912 FLD1_51_C09.b1_A029 Root flooded Pin... 42 0.024
gb|CO164944.1|CO164944 FLD1_51_G03.b1_A029 Root flooded Pin... 42 0.024
gb|CO164986.1|CO164986 FLD1_51_C09.g1_A029 Root flooded Pin... 42 0.024
gb|CO165020.1|CO165020 FLD1_51_G03.g1_A029 Root flooded Pin... 42 0.024
gb|CO165188.1|CO165188 FLD1_53_A04.b1_A029 Root flooded Pin... 42 0.024
gb|CO165263.1|CO165263 FLD1_53_A04.g1_A029 Root flooded Pin... 42 0.024
gb|CO165287.1|CO165287 FLD1_53_C06.g1_A029 Root flooded Pin... 42 0.024
gb|CO165406.1|CO165406 FLD1_54_G11.b1_A029 Root flooded Pin... 42 0.024
gb|CO165590.1|CO165590 FLD1_55_D02.g1_A029 Root flooded Pin... 42 0.024
gb|CO165672.1|CO165672 FLD1_56_E07.b1_A029 Root flooded Pin... 42 0.024
gb|CO165835.1|CO165835 FLD1_57_H12.b1_A029 Root flooded Pin... 42 0.024
gb|CO165896.1|CO165896 FLD1_57_H12.g1_A029 Root flooded Pin... 42 0.024
gb|CO165945.1|CO165945 FLD1_58_F04.b1_A029 Root flooded Pin... 42 0.024
gb|CO166022.1|CO166022 FLD1_58_F04.g1_A029 Root flooded Pin... 42 0.024
gb|CO166763.1|CO166763 FLD1_64_G08.b1_A029 Root flooded Pin... 42 0.024
gb|CO166901.1|CO166901 FLD1_65_H02.b1_A029 Root flooded Pin... 42 0.024
gb|CO166973.1|CO166973 FLD1_65_G10.g1_A029 Root flooded Pin... 42 0.024
gb|CO167032.1|CO167032 FLD1_66_G08.b1_A029 Root flooded Pin... 42 0.024
gb|CO167469.1|CO167469 FLD1_69_D07.b1_A029 Root flooded Pin... 42 0.024
gb|CO167479.1|CO167479 FLD1_69_E07.b1_A029 Root flooded Pin... 42 0.024
gb|CO167560.1|CO167560 FLD1_69_E07.g1_A029 Root flooded Pin... 42 0.024
gb|CO196749.1|CO196749 GEO1_1_G04.b1_A029 Root gravitropism... 42 0.024
gb|CO196827.1|CO196827 GEO1_1_G04.g1_A029 Root gravitropism... 42 0.024
gb|CO197099.1|CO197099 GEO1_3_H05.g1_A029 Root gravitropism... 42 0.024
gb|CO197959.1|CO197959 GEO1_10_G10.b1_A029 Root gravitropis... 42 0.024
gb|CO198038.1|CO198038 GEO1_10_G10.g1_A029 Root gravitropis... 42 0.024
gb|CO198058.1|CO198058 GEO1_11_A10.b1_A029 Root gravitropis... 42 0.024
gb|CO199080.1|CO199080 GEO1_18_E02.g1_A029 Root gravitropis... 42 0.024
gb|CO200763.1|CO200763 RTCNT2_1_H04.b1_A029 Root control 2 ... 42 0.024
gb|CO362387.1|CO362387 RTK1_3_F01.b1_A029 Roots minus potas... 42 0.024
gb|CO362874.1|CO362874 RTK1_6_F12.b1_A029 Roots minus potas... 42 0.024
gb|CO364030.1|CO364030 RTK1_13_F09.b1_A029 Roots minus pota... 42 0.024
gb|CO364191.1|CO364191 RTK1_14_F05.b1_A029 Roots minus pota... 42 0.024
gb|CO364274.1|CO364274 RTK1_14_F05.g1_A029 Roots minus pota... 42 0.024
gb|CO368546.1|CO368546 RTK1_41_G04.b1_A029 Roots minus pota... 42 0.024
gb|CO368601.1|CO368601 RTK1_41_D08.g1_A029 Roots minus pota... 42 0.024
gb|CO368630.1|CO368630 RTK1_41_G04.g1_A029 Roots minus pota... 42 0.024
gb|CO368843.1|CO368843 RTK1_43_E08.b1_A029 Roots minus pota... 42 0.024
gb|CV031443.1|CV031443 RTNACL1_1_D04.g1_A029 Roots plus add... 42 0.024
gb|CV033097.1|CV033097 RTNACL1_20_F09.b1_A029 Roots plus ad... 42 0.024
gb|CV034196.1|CV034196 RTNACL1_39_G07.b1_A029 Roots plus ad... 42 0.024
gb|CV034391.1|CV034391 RTNACL1_40_D06.g1_A029 Roots plus ad... 42 0.024
gb|CV035170.1|CV035170 RTNACL1_14_E02.b1_A029 Roots plus ad... 42 0.024
gb|CV035986.1|CV035986 RTNACL1_43_G10.g1_A029 Roots plus ad... 42 0.024
gb|CV036483.1|CV036483 RTNACL1_59_C08.g1_A029 Roots plus ad... 42 0.024
gb|CX646108.1|CX646108 COLD1_7_H02.b1_A029 Root cold Pinus ... 42 0.024
gb|CX648881.1|CX648881 COLD1_31_B09.g1_A029 Root cold Pinus... 42 0.024
gb|CX649979.1|CX649979 COLD1_42_E12.g1_A029 Root cold Pinus... 42 0.024
gb|DN445887.1|DN445887 EST941686 Sequencing ESTs from loblo... 42 0.024
gb|DN457728.1|DN457728 EST953527 Sequencing ESTs from loblo... 42 0.024
gb|DN463085.1|DN463085 EST958884 Sequencing ESTs from loblo... 42 0.024
gb|DN609212.1|DN609212 EST962262 Subtracted pine embryo lib... 42 0.024
gb|DN609509.1|DN609509 EST962559 Subtracted pine embryo lib... 42 0.024
gb|DN626702.1|DN626702 EST977518 Subtracted pine embryo lib... 42 0.024
gb|DN627195.1|DN627195 EST978011 Subtracted pine embryo lib... 42 0.024
gb|DN627373.1|DN627373 EST978189 Subtracted pine embryo lib... 42 0.024
gb|DN627384.1|DN627384 EST978200 Subtracted pine embryo lib... 42 0.024
gb|DN627604.1|DN627604 EST978420 Subtracted pine embryo lib... 42 0.024
gb|DN627700.1|DN627700 EST978516 Subtracted pine embryo lib... 42 0.024
gb|DN627763.1|DN627763 EST978579 Subtracted pine embryo lib... 42 0.024
gb|DN629136.1|DN629136 EST979952 Subtracted pine embryo lib... 42 0.024
gb|DN629926.1|DN629926 EST980742 Subtracted pine embryo lib... 42 0.024
gb|DN629961.1|DN629961 EST980777 Subtracted pine embryo lib... 42 0.024
gb|DN630599.1|DN630599 EST981415 Subtracted pine embryo lib... 42 0.024
gb|DN630655.1|DN630655 EST981471 Subtracted pine embryo lib... 42 0.024
gb|DN630855.1|DN630855 EST981671 Subtracted pine embryo lib... 42 0.024
gb|DN631389.1|DN631389 EST982205 Subtracted pine embryo lib... 42 0.024
gb|DN631396.1|DN631396 EST982212 Subtracted pine embryo lib... 42 0.024
gb|DN631965.1|DN631965 EST982781 Subtracted pine embryo lib... 42 0.024
gb|DN633221.1|DN633221 EST984037 Subtracted pine embryo lib... 42 0.024
gb|DN633227.1|DN633227 EST984043 Subtracted pine embryo lib... 42 0.024
gb|DN633674.1|DN633674 EST984490 Subtracted pine embryo lib... 42 0.024
gb|DN634053.1|DN634053 EST984869 Subtracted pine embryo lib... 42 0.024
gb|DN634056.1|DN634056 EST984872 Subtracted pine embryo lib... 42 0.024
gb|DN634080.1|DN634080 EST984896 Subtracted pine embryo lib... 42 0.024
gb|DN634383.1|DN634383 EST985199 Subtracted pine embryo lib... 42 0.024
gb|DR012237.1|DR012237 HEAT1_11_F10.b1_A029 Root at 37 C fo... 42 0.024
gb|DR012408.1|DR012408 HEAT1_12_D03.g1_A029 Root at 37 C fo... 42 0.024
gb|DR012458.1|DR012458 HEAT1_13_B01.b1_A029 Root at 37 C fo... 42 0.024
gb|DR012832.1|DR012832 HEAT1_15_F11.b1_A029 Root at 37 C fo... 42 0.024
gb|DR014647.1|DR014647 HEAT1_50_F05.g1_A029 Root at 37 C fo... 42 0.024
gb|DR015192.1|DR015192 STRS1_2_B07.b1_A034 Shoot tip pitch ... 42 0.024
gb|DR015194.1|DR015194 STRS1_2_B09.b1_A034 Shoot tip pitch ... 42 0.024
gb|DR015270.1|DR015270 STRS1_2_B06.g1_A034 Shoot tip pitch ... 42 0.024
gb|DR015534.1|DR015534 STRS1_4_C10.b1_A034 Shoot tip pitch ... 42 0.024
gb|DR015614.1|DR015614 STRS1_4_C10.g1_A034 Shoot tip pitch ... 42 0.024
gb|DR015857.1|DR015857 STRS1_6_C12.b1_A034 Shoot tip pitch ... 42 0.024
gb|DR015885.1|DR015885 STRS1_6_G01.b1_A034 Shoot tip pitch ... 42 0.024
gb|DR015964.1|DR015964 STRS1_6_G01.g1_A034 Shoot tip pitch ... 42 0.024
gb|DR016016.1|DR016016 STRS1_7_D04.b1_A034 Shoot tip pitch ... 42 0.024
gb|DR016057.1|DR016057 STRS1_7_H12.b1_A034 Shoot tip pitch ... 42 0.024
gb|DR016654.1|DR016654 STRS1_11_H11.b1_A034 Shoot tip pitch... 42 0.024
gb|DR016710.1|DR016710 STRS1_11_E09.g1_A034 Shoot tip pitch... 42 0.024
gb|DR016744.1|DR016744 STRS1_11_H11.g1_A034 Shoot tip pitch... 42 0.024
gb|DR016753.1|DR016753 STRS1_12_A08.b1_A034 Shoot tip pitch... 42 0.024
gb|DR016830.1|DR016830 STRS1_12_A08.g1_A034 Shoot tip pitch... 42 0.024
gb|DR017588.1|DR017588 STRS1_17_F06.b1_A034 Shoot tip pitch... 42 0.024
gb|DR017733.1|DR017733 STRS1_18_D07.b1_A034 Shoot tip pitch... 42 0.024
gb|DR017790.1|DR017790 STRS1_18_B08.g1_A034 Shoot tip pitch... 42 0.024
gb|DR018445.1|DR018445 STRS1_23_B12.b1_A034 Shoot tip pitch... 42 0.024
gb|DR018508.1|DR018508 STRS1_23_B12.g1_A034 Shoot tip pitch... 42 0.024
gb|DR018697.1|DR018697 STRS1_25_C12.b1_A034 Shoot tip pitch... 42 0.024
gb|DR019373.1|DR019373 STRS1_29_D01.g1_A034 Shoot tip pitch... 42 0.024
gb|DR020763.1|DR020763 STRS1_39_D07.b1_A034 Shoot tip pitch... 42 0.024
gb|DR020844.1|DR020844 STRS1_39_D07.g1_A034 Shoot tip pitch... 42 0.024
gb|DR021266.1|DR021266 STRS1_43_B02.g1_A034 Shoot tip pitch... 42 0.024
gb|DR021369.1|DR021369 STRS1_44_E07.b1_A034 Shoot tip pitch... 42 0.024
gb|DR021517.1|DR021517 STRS1_45_E06.b1_A034 Shoot tip pitch... 42 0.024
gb|DR022268.1|DR022268 STRS1_50_A01.b1_A034 Shoot tip pitch... 42 0.024
gb|DR022629.1|DR022629 STRS1_52_H06.b1_A034 Shoot tip pitch... 42 0.024
gb|DR022702.1|DR022702 STRS1_52_H06.g1_A034 Shoot tip pitch... 42 0.024
gb|DR022917.1|DR022917 STRS1_54_G12.b1_A034 Shoot tip pitch... 42 0.024
gb|DR023685.1|DR023685 STRS1_59_H03.b1_A034 Shoot tip pitch... 42 0.024
gb|DR023836.1|DR023836 STRS1_60_H06.b1_A034 Shoot tip pitch... 42 0.024
gb|DR024278.1|DR024278 STRS1_63_F07.g1_A034 Shoot tip pitch... 42 0.024
gb|DR024359.1|DR024359 STRS1_64_A11.g1_A034 Shoot tip pitch... 42 0.024
gb|DR024484.1|DR024484 STRS1_65_G01.b1_A034 Shoot tip pitch... 42 0.024
gb|DR024557.1|DR024557 STRS1_65_G01.g1_A034 Shoot tip pitch... 42 0.024
gb|DR025499.1|DR025499 STRS1_72_B01.b1_A034 Shoot tip pitch... 42 0.024
gb|DR047626.1|DR047626 RTBOR1_2_G07.b1_A029 Roots plus adde... 42 0.024
gb|DR047855.1|DR047855 RTBOR1_5_C12.b2_A029 Roots plus adde... 42 0.024
gb|DR047933.1|DR047933 RTBOR1_5_C12.g2_A029 Roots plus adde... 42 0.024
gb|DR048923.1|DR048923 RTBOR1_12_D02.b1_A029 Roots plus add... 42 0.024
gb|DR049338.1|DR049338 RTBOR1_15_C12.g1_A029 Roots plus add... 42 0.024
gb|DR050358.1|DR050358 RTBOR1_23_A04.b1_A029 Roots plus add... 42 0.024
gb|DR050428.1|DR050428 RTBOR1_23_A04.g1_A029 Roots plus add... 42 0.024
gb|DR050874.1|DR050874 RTBOR1_26_E12.b1_A029 Roots plus add... 42 0.024
gb|DR051188.1|DR051188 RTBOR1_28_F05.b1_A029 Roots plus add... 42 0.024
gb|DR051462.1|DR051462 RTBOR1_30_F03.b1_A029 Roots plus add... 42 0.024
gb|DR055656.1|DR055656 RTCA1_25_C03.b1_A029 Roots minus cal... 42 0.024
gb|DR055730.1|DR055730 RTCA1_25_C03.g1_A029 Roots minus cal... 42 0.024
gb|DR056166.1|DR056166 RTCA1_28_B03.g1_A029 Roots minus cal... 42 0.024
gb|DR059137.1|DR059137 RTNIT1_15_H10.g1_A029 Roots minus ni... 42 0.024
gb|DR069461.1|DR069461 RTDK1_7_H11.b1_A029 Roots, dark Pinu... 42 0.024
gb|DR069551.1|DR069551 RTDK1_7_H11.g1_A029 Roots, dark Pinu... 42 0.024
gb|DR069593.1|DR069593 RTDK1_8_E08.b1_A029 Roots, dark Pinu... 42 0.024
gb|DR069674.1|DR069674 RTDK1_8_E12.g1_A029 Roots, dark Pinu... 42 0.024
gb|DR072199.1|DR072199 RTDK1_24_E09.g1_A029 Roots, dark Pin... 42 0.024
gb|DR072333.1|DR072333 RTDK1_25_C09.g1_A029 Roots, dark Pin... 42 0.024
gb|DR072624.1|DR072624 RTDK1_27_B09.g1_A029 Roots, dark Pin... 42 0.024
gb|DR079958.1|DR079958 RTFEPL1_19_B07.b1_A029 Roots plus ad... 42 0.024
gb|DR088362.1|DR088362 RTAL1_1_E02.b1_A029 Roots plus added... 42 0.024
gb|DR089563.1|DR089563 RTAL1_9_B02.g1_A029 Roots plus added... 42 0.024
gb|DR089969.1|DR089969 RTAL1_12_A04.b1_A029 Roots plus adde... 42 0.024
gb|DR090039.1|DR090039 RTAL1_12_H01.b1_A029 Roots plus adde... 42 0.024
gb|DR090721.1|DR090721 RTAL1_17_A09.b1_A029 Roots plus adde... 42 0.024
gb|DR090773.1|DR090773 RTAL1_17_F09.b1_A029 Roots plus adde... 42 0.024
gb|DR091648.1|DR091648 RTAL1_23_B08.b1_A029 Roots plus adde... 42 0.024
gb|DR091821.1|DR091821 RTAL1_24_E01.b1_A029 Roots plus adde... 42 0.024
gb|DR092385.1|DR092385 STRR1_1_C06.b1_A033 Stem Response Re... 42 0.024
gb|DR092651.1|DR092651 STRR1_2_F11.g1_A033 Stem Response Re... 42 0.024
gb|DR092724.1|DR092724 STRR1_3_A06.g1_A033 Stem Response Re... 42 0.024
gb|DR092951.1|DR092951 STRR1_5_C12.b1_A033 Stem Response Re... 42 0.024
gb|DR092983.1|DR092983 STRR1_5_G03.b1_A033 Stem Response Re... 42 0.024
gb|DR093065.1|DR093065 STRR1_5_G03.g1_A033 Stem Response Re... 42 0.024
gb|DR093135.1|DR093135 STRR1_6_G01.b1_A033 Stem Response Re... 42 0.024
gb|DR093138.1|DR093138 STRR1_6_G06.b1_A033 Stem Response Re... 42 0.024
gb|DR093144.1|DR093144 STRR1_6_H01.b1_A033 Stem Response Re... 42 0.024
gb|DR093213.1|DR093213 STRR1_6_G01.g1_A033 Stem Response Re... 42 0.024
gb|DR093216.1|DR093216 STRR1_6_G06.g1_A033 Stem Response Re... 42 0.024
gb|DR093295.1|DR093295 STRR1_7_H05.b1_A033 Stem Response Re... 42 0.024
gb|DR093379.1|DR093379 STRR1_7_H05.g1_A033 Stem Response Re... 42 0.024
gb|DR093851.1|DR093851 STRR1_10_G01.g1_A033 Stem Response R... 42 0.024
gb|DR094138.1|DR094138 STRR1_12_E04.g1_A033 Stem Response R... 42 0.024
gb|DR094283.1|DR094283 STRR1_13_D01.g1_A033 Stem Response R... 42 0.024
gb|DR094350.1|DR094350 STRR1_14_B04.b1_A033 Stem Response R... 42 0.024
gb|DR094352.1|DR094352 STRR1_14_B06.b1_A033 Stem Response R... 42 0.024
gb|DR094423.1|DR094423 STRR1_14_B04.g1_A033 Stem Response R... 42 0.024
gb|DR094424.1|DR094424 STRR1_14_B06.g1_A033 Stem Response R... 42 0.024
gb|DR094716.1|DR094716 STRR1_16_G03.b1_A033 Stem Response R... 42 0.024
gb|DR095020.1|DR095020 STRR1_18_F10.b1_A033 Stem Response R... 42 0.024
gb|DR095100.1|DR095100 STRR1_18_F10.g1_A033 Stem Response R... 42 0.024
gb|DR095191.1|DR095191 STRR1_19_H12.b1_A033 Stem Response R... 42 0.024
gb|DR095208.1|DR095208 STRR1_19_B08.g1_A033 Stem Response R... 42 0.024
gb|DR095418.1|DR095418 STRR1_20_H05.g1_A033 Stem Response R... 42 0.024
gb|DR095948.1|DR095948 STRR1_24_E10.g1_A033 Stem Response R... 42 0.024
gb|DR096608.1|DR096608 STRR1_29_B09.b1_A033 Stem Response R... 42 0.024
gb|DR096742.1|DR096742 STRR1_30_B08.b1_A033 Stem Response R... 42 0.024
gb|DR096796.1|DR096796 STRR1_30_A04.g1_A033 Stem Response R... 42 0.024
gb|DR096915.1|DR096915 STRR1_31_F03.b1_A033 Stem Response R... 42 0.024
gb|DR097046.1|DR097046 STRR1_32_D08.b1_A033 Stem Response R... 42 0.024
gb|DR097290.1|DR097290 STRR1_33_F02.g3_A033 Stem Response R... 42 0.024
gb|DR097408.1|DR097408 STRR1_34_B04.g3_A033 Stem Response R... 42 0.024
gb|DR097506.1|DR097506 STRR1_35_C08.b1_A033 Stem Response R... 42 0.024
gb|DR097783.1|DR097783 STRR1_37_A10.b1_A033 Stem Response R... 42 0.024
gb|DR097848.1|DR097848 STRR1_37_A10.g1_A033 Stem Response R... 42 0.024
gb|DR097950.1|DR097950 STRR1_38_D03.b1_A033 Stem Response R... 42 0.024
gb|DR098018.1|DR098018 STRR1_38_D03.g1_A033 Stem Response R... 42 0.024
gb|DR098098.1|DR098098 STRR1_39_C09.b1_A033 Stem Response R... 42 0.024
gb|DR098193.1|DR098193 STRR1_39_E09.g1_A033 Stem Response R... 42 0.024
gb|DR098533.1|DR098533 STRR1_46_D11.b1_A033 Stem Response R... 42 0.024
gb|DR098845.1|DR098845 STRR1_48_F05.b1_A033 Stem Response R... 42 0.024
gb|DR099931.1|DR099931 STRR1_60_D07.b1_A033 Stem Response R... 42 0.024
gb|DR099985.1|DR099985 STRR1_60_D10.g1_A033 Stem Response R... 42 0.024
gb|DR100053.1|DR100053 STRR1_61_F05.b1_A033 Stem Response R... 42 0.024
gb|DR100541.1|DR100541 STRR1_65_A06.b1_A033 Stem Response R... 42 0.024
gb|DR100760.1|DR100760 STRR1_67_F11.g1_A033 Stem Response R... 42 0.024
gb|DR100889.1|DR100889 STRR1_69_C03.b1_A033 Stem Response R... 42 0.024
gb|DR100959.1|DR100959 STRR1_69_C03.g1_A033 Stem Response R... 42 0.024
gb|DR101035.1|DR101035 STRR1_70_C10.b1_A033 Stem Response R... 42 0.024
gb|DR101072.1|DR101072 STRR1_70_H02.b1_A033 Stem Response R... 42 0.024
gb|DR101314.1|DR101314 STRR1_72_B08.b1_A033 Stem Response R... 42 0.024
gb|DR101331.1|DR101331 STRR1_72_D11.b1_A033 Stem Response R... 42 0.024
gb|DR101558.1|DR101558 STRR1_74_D12.b1_A033 Stem Response R... 42 0.024
gb|DR101805.1|DR101805 STRR1_76_A09.b1_A033 Stem Response R... 42 0.024
gb|DR101830.1|DR101830 STRR1_76_D09.b1_A033 Stem Response R... 42 0.024
gb|DR102360.1|DR102360 STRR1_80_C03.g1_A033 Stem Response R... 42 0.024
gb|DR102434.1|DR102434 STRR1_81_C09.b1_A033 Stem Response R... 42 0.024
gb|DR109603.1|DR109603 RTS1_3_H11.b1_A029 Roots minus sulfu... 42 0.024
gb|DR110190.1|DR110190 RTS1_9_A09.g1_A029 Roots minus sulfu... 42 0.024
gb|DR110448.1|DR110448 RTS1_11_A04.b1_A029 Roots minus sulf... 42 0.024
gb|DR110532.1|DR110532 RTS1_11_A04.g1_A029 Roots minus sulf... 42 0.024
gb|DR117049.1|DR117049 RTMG1_4_H09.b1_A029 Roots minus magn... 42 0.024
gb|DR117126.1|DR117126 RTMG1_4_H09.g1_A029 Roots minus magn... 42 0.024
gb|DR117318.1|DR117318 RTMG1_6_F06.b1_A029 Roots minus magn... 42 0.024
gb|DR118791.1|DR118791 RTMG1_19_E11.b1_A029 Roots minus mag... 42 0.024
gb|DR118873.1|DR118873 RTMG1_19_E11.g1_A029 Roots minus mag... 42 0.024
gb|DR119919.1|DR119919 RTMG1_26_H08.b1_A029 Roots minus mag... 42 0.024
gb|DR120001.1|DR120001 RTMG1_26_H08.g2_A029 Roots minus mag... 42 0.024
gb|DR120542.1|DR120542 RTMG1_30_H12.b1_A029 Roots minus mag... 42 0.024
gb|DR166458.1|DR166458 RTPHOS1_12_D01.b2_A029 Roots minus p... 42 0.024
gb|DR167086.1|DR167086 RTPHOS1_16_C10.g1_A029 Roots minus p... 42 0.024
gb|DR168680.1|DR168680 RTPHOS1_27_D08.b1_A029 Roots minus p... 42 0.024
gb|DR168757.1|DR168757 RTPHOS1_27_D08.g1_A029 Roots minus p... 42 0.024
gb|DR179491.1|DR179491 RTMNUT1_22_A09.g2_A029 Roots minus m... 42 0.024
gb|DR180650.1|DR180650 RTMNUT1_34_A10.b1_A029 Roots minus m... 42 0.024
gb|DR384554.1|DR384554 RTHG1_3_B06.b1_A029 Roots plus added... 42 0.024
gb|DR384574.1|DR384574 RTHG1_3_D07.b1_A029 Roots plus added... 42 0.024
gb|DR384602.1|DR384602 RTHG1_3_G06.b1_A029 Roots plus added... 42 0.024
gb|DR385171.1|DR385171 RTHG1_7_C01.b1_A029 Roots plus added... 42 0.024
gb|DR385416.1|DR385416 RTHG1_8_B12.g1_A029 Roots plus added... 42 0.024
gb|DR385539.1|DR385539 RTHG1_9_F12.b1_A029 Roots plus added... 42 0.024
gb|DR385580.1|DR385580 RTHG1_9_C01.g1_A029 Roots plus added... 42 0.024
gb|DR386347.1|DR386347 RTHG1_14_C02.g1_A029 Roots plus adde... 42 0.024
gb|DR387032.1|DR387032 RTHG1_19_A07.b1_A029 Roots plus adde... 42 0.024
gb|DR387099.1|DR387099 RTHG1_19_A07.g1_A029 Roots plus adde... 42 0.024
gb|DR387187.1|DR387187 RTHG1_20_C05.b1_A029 Roots plus adde... 42 0.024
gb|DR387193.1|DR387193 RTHG1_20_D01.b1_A029 Roots plus adde... 42 0.024
gb|DR387265.1|DR387265 RTHG1_20_D01.g1_A029 Roots plus adde... 42 0.024
gb|DR387581.1|DR387581 RTHG1_22_F12.g2_A029 Roots plus adde... 42 0.024
gb|DR387648.1|DR387648 RTHG1_23_E12.b1_A029 Roots plus adde... 42 0.024
gb|DR387815.1|DR387815 RTHG1_24_G09.b1_A029 Roots plus adde... 42 0.024
gb|DR388318.1|DR388318 RTHG1_27_B06.g1_A029 Roots plus adde... 42 0.024
gb|DR388362.1|DR388362 RTHG1_27_F08.g1_A029 Roots plus adde... 42 0.024
gb|DR388890.1|DR388890 RTHG1_31_C12.b1_A029 Roots plus adde... 42 0.024
gb|DR388967.1|DR388967 RTHG1_31_C12.g1_A029 Roots plus adde... 42 0.024
gb|DR692592.1|DR692592 EST1082680 Normalized pine embryo li... 42 0.024
gb|DR746314.1|DR746314 RTCU1_36_E01.b1_A029 Roots plus adde... 42 0.024
gb|DR746391.1|DR746391 RTCU1_36_E01.g1_A029 Roots plus adde... 42 0.024
gb|AY500842.1| Pinus monticola class IV chitinase A (Ch4A) ... 42 0.024
gb|AY500843.1| Pinus monticola class IV chitinase Aa (Ch4A)... 42 0.024
gb|CV034400.1|CV034400 RTNACL1_40_E03.g1_A029 Roots plus ad... 40 0.096
gb|DR018449.1|DR018449 STRS1_23_C05.b1_A034 Shoot tip pitch... 38 0.38
gb|DR024374.1|DR024374 STRS1_64_C05.g1_A034 Shoot tip pitch... 38 0.38
gb|DR098395.1|DR098395 STRR1_45_F01.b1_A033 Stem Response R... 38 0.38
gb|DR098471.1|DR098471 STRR1_45_F01.g1_A033 Stem Response R... 38 0.38
>gb|CO164452.1|CO164452 FLD1_48_C12.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_48_C12_A029 3', mRNA sequence
Length = 835
Score = 50.1 bits (25), Expect = 1e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | |||||||||||||||||||||
Sbjct: 419 cccgcactccagcccaccgttgatgatgttggt 387
>gb|DR015271.1|DR015271 STRS1_2_B07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_2_B07_A034 5', mRNA sequence
Length = 531
Score = 50.1 bits (25), Expect = 1e-004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | |||||||||||||||||||||
Sbjct: 71 cccgcactccagcccaccgttgatgatgttggt 103
>gb|DR016972.1|DR016972 STRS1_13_F10.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_13_F10_A034 3', mRNA sequence
Length = 738
Score = 50.1 bits (25), Expect = 1e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | |||||||||||||||||||||
Sbjct: 485 cccgcactccagcccaccgttgatgatgttggt 453
>gb|DR022580.1|DR022580 STRS1_52_B11.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_52_B11_A034 3', mRNA sequence
Length = 759
Score = 50.1 bits (25), Expect = 1e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | |||||||||||||||||||||
Sbjct: 485 cccgcactccagcccaccgttgatgatgttggt 453
>gb|DR090290.1|DR090290 RTAL1_14_C02.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_14_C02_A029 3', mRNA sequence
Length = 571
Score = 50.1 bits (25), Expect = 1e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | |||||||||||||||||||||
Sbjct: 553 cccgcactccagcccaccgttgatgatgttggt 521
>gb|DR090362.1|DR090362 RTAL1_14_C02.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_14_C02_A029 5', mRNA sequence
Length = 551
Score = 50.1 bits (25), Expect = 1e-004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | |||||||||||||||||||||
Sbjct: 540 cccgcactccagcccaccgttgatgatgttggt 508
>gb|CO161962.1|CO161962 FLD1_32_F10.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_32_F10_A029 3', mRNA sequence
Length = 764
Score = 44.1 bits (22), Expect = 0.006
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 322 atcacggcgtggcacgacggcttgttgtcccgcgcgttcatccagaaccacagcgctgtc 381
|||||| |||||||||| |||||| || ||||| ||||||||||||||| ||| |||
Sbjct: 272 atcacgtcgtggcacgaaggcttgggagcctgcgcggtcatccagaaccacaccgccgtc 213
Query: 382 tt 383
||
Sbjct: 212 tt 211
>gb|CO162035.1|CO162035 FLD1_32_F10.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_32_F10_A029 5', mRNA sequence
Length = 876
Score = 44.1 bits (22), Expect = 0.006
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 322 atcacggcgtggcacgacggcttgttgtcccgcgcgttcatccagaaccacagcgctgtc 381
|||||| |||||||||| |||||| || ||||| ||||||||||||||| ||| |||
Sbjct: 571 atcacgtcgtggcacgaaggcttgggagcctgcgcggtcatccagaaccacaccgccgtc 512
Query: 382 tt 383
||
Sbjct: 511 tt 510
>gb|DR017154.1|DR017154 STRS1_14_H10.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_14_H10_A034 3', mRNA sequence
Length = 763
Score = 44.1 bits (22), Expect = 0.006
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 322 atcacggcgtggcacgacggcttgttgtcccgcgcgttcatccagaaccacagcgctgtc 381
|||||| |||||||||| |||||| || ||||| ||||||||||||||| ||| |||
Sbjct: 202 atcacgtcgtggcacgaaggcttgggagcctgcgcggtcatccagaaccacaccgccgtc 143
Query: 382 tt 383
||
Sbjct: 142 tt 141
>gb|DR020189.1|DR020189 STRS1_35_F02.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_35_F02_A034 3', mRNA sequence
Length = 787
Score = 44.1 bits (22), Expect = 0.006
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 322 atcacggcgtggcacgacggcttgttgtcccgcgcgttcatccagaaccacagcgctgtc 381
|||||| |||||||||| |||||| || ||||| ||||||||||||||| ||| |||
Sbjct: 286 atcacgtcgtggcacgaaggcttgggagcctgcgcggtcatccagaaccacaccgccgtc 227
Query: 382 tt 383
||
Sbjct: 226 tt 225
>gb|DR020265.1|DR020265 STRS1_35_F02.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_35_F02_A034 5', mRNA sequence
Length = 675
Score = 44.1 bits (22), Expect = 0.006
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 322 atcacggcgtggcacgacggcttgttgtcccgcgcgttcatccagaaccacagcgctgtc 381
|||||| |||||||||| |||||| || ||||| ||||||||||||||| ||| |||
Sbjct: 531 atcacgtcgtggcacgaaggcttgggagcctgcgcggtcatccagaaccacaccgccgtc 472
Query: 382 tt 383
||
Sbjct: 471 tt 470
>gb|DR071605.1|DR071605 RTDK1_21_A07.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_21_A07_A029 3', mRNA sequence
Length = 830
Score = 44.1 bits (22), Expect = 0.006
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 322 atcacggcgtggcacgacggcttgttgtcccgcgcgttcatccagaaccacagcgctgtc 381
|||||| |||||||||| |||||| || ||||| ||||||||||||||| ||| |||
Sbjct: 255 atcacgtcgtggcacgaaggcttgggagcctgcgcggtcatccagaaccacaccgccgtc 314
Query: 382 tt 383
||
Sbjct: 315 tt 316
>gb|BF778111.1|BF778111 NXSI_077_C06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_077_C06 5' similar to Arabidopsis thaliana
sequence At3g12500 basic chitinase chiB see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 319
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 170 cccgcactccagcccgccgttgatgatgttggt 138
>gb|BM133734.1|BM133734 NXLV_011_E04_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_011_E04 5' similar to Arabidopsis thaliana
sequence At3g12500 basic chitinase chiB see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 291
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 110 cccgcactccagcccgccgttgatgatgttggt 78
>gb|CF387630.1|CF387630 RTDR1_19_H08.b1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_19_H08_A015 3', mRNA
sequence
Length = 582
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 332 cccgcactccagcccgccgttgatgatgttggt 300
>gb|CF387786.1|CF387786 RTDR1_18_H04.b1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_18_H04_A015 3', mRNA
sequence
Length = 504
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 229 cccgcactccagcccgccgttgatgatgttggt 197
>gb|CF388141.1|CF388141 RTDR2_1_H11.b1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_1_H11_A021 3', mRNA
sequence
Length = 619
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 362 cccgcactccagcccgccgttgatgatgttggt 330
>gb|CF388211.1|CF388211 RTDR2_1_H11.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_1_H11_A021 5', mRNA
sequence
Length = 734
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 728 cccgcactccagcccgccgttgatgatgttggt 696
>gb|CF395319.1|CF395319 RTDS2_11_D06.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_11_D06_A021 3', mRNA sequence
Length = 603
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 186 cccgcactccagcccgccgttgatgatgttggt 154
>gb|CF395470.1|CF395470 RTDS2_11_D06.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_11_D06_A021 5', mRNA sequence
Length = 700
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 634 cccgcactccagcccgccgttgatgatgttggt 602
>gb|CF395520.1|CF395520 RTDS2_12_H05.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_12_H05_A021 3', mRNA sequence
Length = 549
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 296 cccgcactccagcccgccgttgatgatgttggt 264
>gb|CF395564.1|CF395564 RTDS2_12_H05.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_12_H05_A021 5', mRNA sequence
Length = 573
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 296 cccgcactccagcccgccgttgatgatgttggt 264
>gb|CF395868.1|CF395868 RTDS2_19_D02.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_19_D02_A021 3', mRNA sequence
Length = 550
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 293 cccgcactccagcccgccgttgatgatgttggt 261
>gb|CF395919.1|CF395919 RTDS2_19_B08.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_19_B08_A021 5', mRNA sequence
Length = 491
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 438 cccgcactccaacccgccgttgatgatgttggt 470
>gb|CF396431.1|CF396431 RTDS2_22_E06.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_22_E06_A021 3', mRNA sequence
Length = 446
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 114 cccgcactccagcccgccgttgatgatgttggt 82
>gb|CF397664.1|CF397664 RTDS3_1_A06.b2_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_1_A06_A022 3', mRNA sequence
Length = 381
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 115 cccgcactccagcccgccgttgatgatgttggt 83
>gb|CF398048.1|CF398048 RTDS3_22_E10.b1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_22_E10_A022 3', mRNA sequence
Length = 673
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 46 cccgcactccagcccgccgttgatgatgttggt 78
>gb|CF398531.1|CF398531 RTDS3_15_D12.b1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_15_D12_A022 3', mRNA sequence
Length = 626
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 373 cccgcactccagcccgccgttgatgatgttggt 341
>gb|CF399019.1|CF399019 RTDS3_9_G10.b1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_9_G10_A022 3', mRNA sequence
Length = 534
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 117 cccgcactccagcccgccgttgatgatgttggt 85
>gb|CF399075.1|CF399075 RTDS3_9_A04.b1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_9_A04_A022 3', mRNA sequence
Length = 392
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 126 cccgcactccagcccgccgttgatgatgttggt 94
>gb|CF399080.1|CF399080 RTDS3_9_D03.b1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_9_D03_A022 3', mRNA sequence
Length = 690
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 283 cccgcactccagcccgccgttgatgatgttggt 251
>gb|CF399164.1|CF399164 RTDS3_9_G10.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_9_G10_A022 5', mRNA sequence
Length = 760
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 583 cccgcactccagcccgccgttgatgatgttggt 551
>gb|CF471547.1|CF471547 RTDS1_4_A12.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_4_A12_A015 3', mRNA sequence
Length = 745
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 469 cccgcactccagcccgccgttgatgatgttggt 437
>gb|CF471658.1|CF471658 RTDS1_6_C09.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_6_C09_A015 3', mRNA sequence
Length = 658
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 383 cccgcactccagcccgccgttgatgatgttggt 351
>gb|CF471773.1|CF471773 RTDS1_6_C09.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_6_C09_A015 5', mRNA sequence
Length = 700
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 420 cccgcactccagcccgccgttgatgatgttggt 388
>gb|CF472136.1|CF472136 RTDS1_8_F04.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_8_F04_A015 5', mRNA sequence
Length = 617
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 355 cccgcactccagcccgccgttgatgatgttggt 323
>gb|CF668863.1|CF668863 RTCNT1_39_D06.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_39_D06_A029 3', mRNA sequence
Length = 586
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 52 cccgcactccagcccgccgttgatgatgttggt 20
>gb|CR392715.1|CR392715 CR392715 RN Pinus pinaster cDNA clone RN37A08, mRNA sequence
Length = 334
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 81 cccgcactccaccccgccgttgatgatgttggt 49
>gb|CO158329.1|CO158329 FLD1_6_E09.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_6_E09_A029 3', mRNA sequence
Length = 724
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 471 cccgcactccagcccgccgttgatgatgttggt 439
>gb|CO158408.1|CO158408 FLD1_6_E09.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_6_E09_A029 5', mRNA sequence
Length = 772
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 560 cccgcactccagcccgccgttgatgatgttggt 528
>gb|CO158755.1|CO158755 FLD1_9_C03.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_9_C03_A029 3', mRNA sequence
Length = 680
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 361 cccgcactccagcccgccgttgatgatgttggt 329
>gb|CO158832.1|CO158832 FLD1_9_C03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_9_C03_A029 5', mRNA sequence
Length = 646
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 644 cccgcactccagcccgccgttgatgatgttggt 612
>gb|CO159100.1|CO159100 FLD1_11_G12.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_11_G12_A029 3', mRNA sequence
Length = 674
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 117 cccgcactccagcccgccgttgatgatgttggt 85
>gb|CO159608.1|CO159608 FLD1_14_D10.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_14_D10_A029 5', mRNA sequence
Length = 789
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 410 cccgcactccagcccgccgttgatgatgttggt 442
>gb|CO160085.1|CO160085 FLD1_18_F09.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_18_F09_A029 3', mRNA sequence
Length = 625
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 361 cccgcactccagcccgccgttgatgatgttggt 329
>gb|CO160257.1|CO160257 FLD1_19_F10.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_19_F10_A029 5', mRNA sequence
Length = 347
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 232 cccgcactccagcccgccgttgatgatgttggt 264
>gb|CO160278.1|CO160278 FLD1_20_A03.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_20_A03_A029 3', mRNA sequence
Length = 636
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 383 cccgcactccagcccgccgttgatgatgttggt 351
>gb|CO160307.1|CO160307 FLD1_20_D05.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_20_D05_A029 3', mRNA sequence
Length = 726
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 460 cccgcactccagcccgccgttgatgatgttggt 428
>gb|CO160353.1|CO160353 FLD1_20_A03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_20_A03_A029 5', mRNA sequence
Length = 764
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 612 cccgcactccagcccgccgttgatgatgttggt 580
>gb|CO160858.1|CO160858 FLD1_25_C09.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_25_C09_A029 3', mRNA sequence
Length = 854
Score = 42.1 bits (21), Expect = 0.024
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 219 cccgcactcgatcccaccgttgatgatgttggt 251
||||||||| | ||| |||||||||||||||||
Sbjct: 597 cccgcactccagcccgccgttgatgatgttggt 565
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 38,097
Number of Sequences: 355925
Number of extensions: 38097
Number of successful extensions: 9899
Number of sequences better than 0.5: 327
Number of HSP's better than 0.5 without gapping: 326
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 9257
Number of HSP's gapped (non-prelim): 643
length of query: 570
length of database: 217,277,237
effective HSP length: 19
effective length of query: 551
effective length of database: 210,514,662
effective search space: 115993578762
effective search space used: 115993578762
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)