BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2647494.2.1
(730 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DN632011.1|DN632011 EST982827 Subtracted pine embryo lib... 232 2e-059
gb|CF390333.1|CF390333 RTDR2_18_H07.g1_A021 Loblolly pine r... 224 4e-057
gb|CF390646.1|CF390646 RTDR2_20_A10.g1_A021 Loblolly pine r... 224 4e-057
gb|CF392858.1|CF392858 RTDR3_19_B12.g1_A022 Loblolly pine r... 224 4e-057
gb|CF394590.1|CF394590 RTDS2_6_F03.g1_A021 Drought-stressed... 224 4e-057
gb|CF471162.1|CF471162 RTDS1_16_G01.g1_A015 Drought-stresse... 224 4e-057
gb|CF471914.1|CF471914 RTDS1_7_A07.g1_A015 Drought-stressed... 224 4e-057
gb|CF474453.1|CF474453 RTWW2_20_G08.g1_A021 Well-watered lo... 224 4e-057
gb|CF474564.1|CF474564 RTWW2_9_F07.g1_A021 Well-watered lob... 224 4e-057
gb|CF476203.1|CF476203 RTWW2_21_B05.g1_A021 Well-watered lo... 224 4e-057
gb|CF478197.1|CF478197 RTWW3_19_G10.g1_A022 Well-watered lo... 224 4e-057
gb|CF479658.1|CF479658 RTWW3_11_G07.g1_A022 Well-watered lo... 224 4e-057
gb|CF670017.1|CF670017 RTCNT1_47_C08.g1_A029 Root control P... 224 4e-057
gb|CF671674.1|CF671674 RTCNT1_58_C05.g1_A029 Root control P... 224 4e-057
gb|CO159768.1|CO159768 FLD1_15_F02.g1_A029 Root flooded Pin... 224 4e-057
gb|CO160965.1|CO160965 FLD1_25_F03.g1_A029 Root flooded Pin... 224 4e-057
gb|CO161236.1|CO161236 FLD1_27_B02.g1_A029 Root flooded Pin... 224 4e-057
gb|CO163592.1|CO163592 FLD1_42_C08.g1_A029 Root flooded Pin... 224 4e-057
gb|CO172518.1|CO172518 NDL1_30_F02.b1_A029 Needles control ... 224 4e-057
gb|CO172528.1|CO172528 NDL1_30_G02.b1_A029 Needles control ... 224 4e-057
gb|CO173019.1|CO173019 NDL1_33_A12.g1_A029 Needles control ... 224 4e-057
gb|CO199485.1|CO199485 GEO2_1_B11.g1_A032 Root gravitropism... 224 4e-057
gb|CO362025.1|CO362025 NDL2_8_D09.g1_A029 Needles control 2... 224 4e-057
gb|CO369623.1|CO369623 RTK1_48_H05.b1_A029 Roots minus pota... 224 4e-057
gb|CO369704.1|CO369704 RTK1_48_H05.g1_A029 Roots minus pota... 224 4e-057
gb|CX650465.1|CX650465 COLD1_45_H01.g1_A029 Root cold Pinus... 224 4e-057
gb|DN453990.1|DN453990 EST949789 Sequencing ESTs from loblo... 224 4e-057
gb|DN629517.1|DN629517 EST980333 Subtracted pine embryo lib... 224 4e-057
gb|DR015001.1|DR015001 HEAT1_52_H07.g1_A029 Root at 37 C fo... 224 4e-057
gb|DR050737.1|DR050737 RTBOR1_25_H06.b1_A029 Roots plus add... 224 4e-057
gb|DR051022.1|DR051022 RTBOR1_27_E03.b1_A029 Roots plus add... 224 4e-057
gb|DR051825.1|DR051825 RTBOR1_32_D07.g1_A029 Roots plus add... 224 4e-057
gb|DR069352.1|DR069352 RTDK1_6_E09.g1_A029 Roots, dark Pinu... 224 4e-057
gb|DR070016.1|DR070016 RTDK1_10_F07.g1_A029 Roots, dark Pin... 224 4e-057
gb|DR071865.1|DR071865 RTDK1_22_C05.g1_A029 Roots, dark Pin... 224 4e-057
gb|DR080599.1|DR080599 RTFEPL1_23_G06.g1_A029 Roots plus ad... 224 4e-057
gb|DR092849.1|DR092849 STRR1_4_A03.g1_A033 Stem Response Re... 224 4e-057
gb|DR095701.1|DR095701 STRR1_23_B08.b1_A033 Stem Response R... 224 4e-057
gb|DR095772.1|DR095772 STRR1_23_B08.g1_A033 Stem Response R... 224 4e-057
gb|DR096537.1|DR096537 STRR1_28_D02.g1_A033 Stem Response R... 224 4e-057
gb|DR098906.1|DR098906 STRR1_48_D12.g1_A033 Stem Response R... 224 4e-057
gb|DR111086.1|DR111086 RTS1_15_D08.b1_A029 Roots minus sulf... 224 4e-057
gb|DR118368.1|DR118368 RTMG1_12_G11.g1_A029 Roots minus mag... 224 4e-057
gb|DR165215.1|DR165215 RTPHOS1_3_A06.g1_A029 Roots minus ph... 224 4e-057
gb|DR180620.1|DR180620 RTMNUT1_33_F07.g1_A029 Roots minus m... 224 4e-057
gb|DR180898.1|DR180898 RTMNUT1_35_C02.g1_A029 Roots minus m... 224 4e-057
gb|DT625059.1|DT625059 EST1159334 Sequencing ESTs from lobl... 224 4e-057
gb|CO369294.1|CO369294 RTK1_46_E05.b1_A029 Roots minus pota... 218 2e-055
gb|CX649658.1|CX649658 COLD1_36_E02.g1_A029 Root cold Pinus... 218 2e-055
gb|DR012151.1|DR012151 HEAT1_10_C06.g1_A029 Root at 37 C fo... 218 2e-055
gb|DR109388.1|DR109388 RTS1_1_D07.g1_A029 Roots minus sulfu... 218 2e-055
gb|DR018452.1|DR018452 STRS1_23_C11.b1_A034 Shoot tip pitch... 216 1e-054
gb|DR057118.1|DR057118 RTNIT1_2_E07.g1_A029 Roots minus nit... 216 1e-054
gb|DR069344.1|DR069344 RTDK1_6_D09.g1_A029 Roots, dark Pinu... 216 1e-054
gb|DR178261.1|DR178261 RTMNUT1_10_B01.g1_A029 Roots minus m... 216 1e-054
gb|DR689918.1|DR689918 EST1080004 Normalized pine embryo li... 216 1e-054
gb|CF392737.1|CF392737 RTDR3_5_G03.g1_A022 Loblolly pine ro... 214 4e-054
gb|CO172443.1|CO172443 NDL1_29_F06.g1_A029 Needles control ... 214 4e-054
gb|DR023998.1|DR023998 STRS1_61_C12.g1_A034 Shoot tip pitch... 214 4e-054
gb|DR051102.1|DR051102 RTBOR1_27_E03.g1_A029 Roots plus add... 214 4e-054
gb|DR111233.1|DR111233 RTS1_16_F05.b1_A029 Roots minus sulf... 214 4e-054
gb|DR384491.1|DR384491 RTHG1_2_C10.g1_A029 Roots plus added... 214 4e-054
gb|DR178192.1|DR178192 RTMNUT1_10_B01.b1_A029 Roots minus m... 210 6e-053
gb|CV034005.1|CV034005 RTNACL1_38_A08.b1_A029 Roots plus ad... 208 2e-052
gb|BE458158.1|BE458158 NXCI_010_B06_F NXCI (Nsf Xylem Compr... 204 4e-051
gb|BG317999.1|BG317999 NXPV_008_D03_F NXPV (Nsf Xylem Plani... 204 4e-051
gb|BI076909.1|BI076909 NXPV_082_E10_F NXPV (Nsf Xylem Plani... 204 4e-051
gb|CF474311.1|CF474311 RTWW2_20_G08.b1_A021 Well-watered lo... 204 4e-051
gb|CO157723.1|CO157723 FLD1_1_D10.g1_A029 Root flooded Pinu... 204 4e-051
gb|CO161153.1|CO161153 FLD1_27_B02.b1_A029 Root flooded Pin... 204 4e-051
gb|CO361950.1|CO361950 NDL2_8_D09.b1_A029 Needles control 2... 204 4e-051
gb|DR011179.1|DR011179 HEAT1_4_C05.b1_A029 Root at 37 C for... 204 4e-051
gb|DR011251.1|DR011251 HEAT1_4_C05.g1_A029 Root at 37 C for... 204 4e-051
gb|DR014915.1|DR014915 HEAT1_52_H07.b1_A029 Root at 37 C fo... 204 4e-051
gb|DR098999.1|DR098999 STRR1_50_F01.b1_A033 Stem Response R... 204 4e-051
gb|DR385831.1|DR385831 RTHG1_11_D08.b1_A029 Roots plus adde... 204 4e-051
gb|CX649582.1|CX649582 COLD1_36_E02.b1_A029 Root cold Pinus... 202 1e-050
gb|DR688295.1|DR688295 EST1078379 Normalized pine embryo li... 202 1e-050
gb|BX252928.1|BX252928 BX252928 Pinus pinaster differenciat... 200 6e-050
gb|AI725056.1|AI725056 955 PtIFG2 Pinus taeda cDNA clone 88... 198 2e-049
gb|BG318574.1|BG318574 NXPV_015_D04_F NXPV (Nsf Xylem Plani... 198 2e-049
gb|DR051752.1|DR051752 RTBOR1_32_D07.b1_A029 Roots plus add... 198 2e-049
gb|DN632586.1|DN632586 EST983402 Subtracted pine embryo lib... 196 9e-049
gb|DR688181.1|DR688181 EST1078265 Normalized pine embryo li... 196 9e-049
gb|AL749594.1|AL749594 AL749594 AN Pinus pinaster cDNA clon... 194 4e-048
gb|AI812644.1|AI812644 17D3 Pine Lambda Zap Xylem library P... 192 1e-047
gb|CF396723.1|CF396723 RTDS2_23_G03.g1_A021 Drought-stresse... 192 1e-047
gb|DR092782.1|DR092782 STRR1_4_A03.b1_A033 Stem Response Re... 190 5e-047
gb|BQ696816.1|BQ696816 NXPV_045_E10_F NXPV (Nsf Xylem Plani... 188 2e-046
gb|BE187191.1|BE187191 NXNV_160_D05_F Nsf Xylem Normal wood... 186 9e-046
gb|BF517782.1|BF517782 NXSI_031_B07_F NXSI (Nsf Xylem Side ... 186 9e-046
gb|CO163510.1|CO163510 FLD1_42_C08.b1_A029 Root flooded Pin... 186 9e-046
gb|DR071784.1|DR071784 RTDK1_22_C05.b1_A029 Roots, dark Pin... 186 9e-046
gb|DR118286.1|DR118286 RTMG1_12_G11.b1_A029 Roots minus mag... 186 9e-046
gb|CF663725.1|CF663725 RTCNT1_4_F05.g1_A029 Root control Pi... 184 3e-045
gb|DR053468.1|DR053468 RTCA1_11_H01.b1_A029 Roots minus cal... 184 3e-045
gb|DR099013.1|DR099013 STRR1_50_F01.g1_A033 Stem Response R... 184 3e-045
gb|DR180534.1|DR180534 RTMNUT1_33_F07.b1_A029 Roots minus m... 184 3e-045
gb|BM493586.1|BM493586 NXLV_066_H03_F NXLV (Nsf Xylem Late ... 182 1e-044
gb|DR018654.1|DR018654 STRS1_24_F11.g1_A034 Shoot tip pitch... 178 2e-043
gb|DR111846.1|DR111846 RTS1_20_D08.g1_A029 Roots minus sulf... 178 2e-043
gb|BX666029.1|BX666029 BX666029 RN Pinus pinaster cDNA clon... 174 3e-042
gb|DR057048.1|DR057048 RTNIT1_2_E07.b1_A029 Roots minus nit... 170 5e-041
gb|AW064891.1|AW064891 ST37A12 Pine TriplEx shoot tip libra... 168 2e-040
gb|CO166309.1|CO166309 FLD1_61_B05.b1_A029 Root flooded Pin... 168 2e-040
gb|CO166371.1|CO166371 FLD1_61_B05.g1_A029 Root flooded Pin... 153 1e-035
gb|CO160883.1|CO160883 FLD1_25_F03.b1_A029 Root flooded Pin... 147 7e-034
gb|DR111771.1|DR111771 RTS1_20_D08.b1_A029 Roots minus sulf... 145 3e-033
gb|AW869889.1|AW869889 NXNV_122_F12_F Nsf Xylem Normal wood... 141 5e-032
gb|CO172615.1|CO172615 NDL1_30_G02.g1_A029 Needles control ... 141 5e-032
gb|CF396600.1|CF396600 RTDS2_23_G03.b1_A021 Drought-stresse... 137 7e-031
gb|CF392630.1|CF392630 RTDR3_5_G03.b1_A022 Loblolly pine ro... 131 4e-029
gb|CF390252.1|CF390252 RTDR2_18_H07.b1_A021 Loblolly pine r... 129 2e-028
gb|BM427931.1|BM427931 NXRV_006_D07_F NXRV (Nsf Xylem Root ... 127 7e-028
gb|CO199417.1|CO199417 GEO2_1_B11.b1_A032 Root gravitropism... 127 7e-028
gb|BX784176.1|BX784176 BX784176 Pinus pinaster differenciat... 123 1e-026
gb|CF663444.1|CF663444 RTCNT1_2_H02.g1_A029 Root control Pi... 117 7e-025
gb|CO368914.1|CO368914 RTK1_43_E05.g1_A029 Roots minus pota... 117 7e-025
gb|CX714188.1|CX714188 RTPQ1_18_H05.g1_A032 Roots treated w... 117 7e-025
gb|DR018516.1|DR018516 STRS1_23_C11.g1_A034 Shoot tip pitch... 117 7e-025
gb|DR025376.1|DR025376 STRS1_71_F08.b1_A034 Shoot tip pitch... 117 7e-025
gb|DR054692.1|DR054692 RTCA1_18_H11.g1_A029 Roots minus cal... 117 7e-025
gb|DR055912.1|DR055912 RTCA1_26_F10.g1_A029 Roots minus cal... 117 7e-025
gb|DR098693.1|DR098693 STRR1_47_F08.b1_A033 Stem Response R... 117 7e-025
gb|BQ654503.1|BQ654503 NXRV081_B04_F NXRV (Nsf Xylem Root w... 115 3e-024
gb|DR101603.1|DR101603 STRR1_74_B07.g1_A033 Stem Response R... 115 3e-024
gb|DR101538.1|DR101538 STRR1_74_B07.b1_A033 Stem Response R... 113 1e-023
gb|CF388201.1|CF388201 RTDR2_1_A04.g1_A021 Loblolly pine ro... 111 4e-023
gb|DR052091.1|DR052091 RTCA1_2_H04.b1_A029 Roots minus calc... 109 2e-022
gb|DR052172.1|DR052172 RTCA1_2_H04.g1_A029 Roots minus calc... 109 2e-022
gb|DR068593.1|DR068593 RTDK1_1_E12.g1_A029 Roots, dark Pinu... 109 2e-022
gb|DR069842.1|DR069842 RTDK1_9_F05.g1_A029 Roots, dark Pinu... 109 2e-022
gb|DR080526.1|DR080526 RTFEPL1_23_G06.b1_A029 Roots plus ad... 109 2e-022
gb|AI725349.1|AI725349 1215 PtIFG2 Pinus taeda cDNA clone 9... 107 6e-022
gb|CV033869.1|CV033869 RTNACL1_37_D01.b1_A029 Roots plus ad... 107 6e-022
gb|CV033949.1|CV033949 RTNACL1_37_D01.g1_A029 Roots plus ad... 107 6e-022
gb|DR048775.1|DR048775 RTBOR1_11_E03.b1_A029 Roots plus add... 107 6e-022
gb|CO172603.1|CO172603 NDL1_30_F02.g1_A029 Needles control ... 105 3e-021
gb|BF609708.1|BF609708 NXSI_048_D09_F NXSI (Nsf Xylem Side ... 103 1e-020
gb|DN613096.1|DN613096 EST966146 Subtracted pine embryo lib... 103 1e-020
gb|DN613206.1|DN613206 EST966256 Subtracted pine embryo lib... 103 1e-020
gb|BX682392.2|BX682392 BX682392 Pinus pinaster differenciat... 101 4e-020
gb|DT628670.1|DT628670 EST1155240 Subtracted pine embryo li... 101 4e-020
gb|BX250564.1|BX250564 BX250564 Pinus pinaster differenciat... 100 2e-019
gb|AW698182.1|AW698182 NXNV_074_D02_F Nsf Xylem Normal wood... 100 2e-019
gb|DN633330.1|DN633330 EST984146 Subtracted pine embryo lib... 100 2e-019
gb|DR069757.1|DR069757 RTDK1_9_F05.b1_A029 Roots, dark Pinu... 100 2e-019
gb|AA556289.1|AA556289 144 Loblolly pine N Pinus taeda cDNA... 98 6e-019
gb|AW042953.1|AW042953 ST27E04 Pine TriplEx shoot tip libra... 96 2e-018
gb|BF777389.1|BF777389 NXSI_071_A07_F NXSI (Nsf Xylem Side ... 96 2e-018
gb|AW289858.1|AW289858 NXNV007A06F Nsf Xylem Normal wood Ve... 90 1e-016
gb|CD026515.1|CD026515 NXNV007A06 Nsf Xylem Normal wood Ver... 90 1e-016
gb|BG832743.1|BG832743 NXPV_079_C02_F NXPV (Nsf Xylem Plani... 82 4e-014
gb|DR054529.1|DR054529 RTCA1_17_H11.g1_A029 Roots minus cal... 80 1e-013
gb|DR054602.1|DR054602 RTCA1_18_H11.b1_A029 Roots minus cal... 80 1e-013
gb|DR048854.1|DR048854 RTBOR1_11_E03.g1_A029 Roots plus add... 78 6e-013
gb|CX714145.1|CX714145 RTPQ1_18_H05.b1_A032 Roots treated w... 72 3e-011
gb|DR025465.1|DR025465 STRS1_71_F08.g1_A034 Shoot tip pitch... 72 3e-011
gb|DR018598.1|DR018598 STRS1_24_F11.b1_A034 Shoot tip pitch... 70 1e-010
gb|AW225721.1|AW225721 ST71A10 Pine TriplEx shoot tip libra... 68 5e-010
gb|CF391228.1|CF391228 RTDR3_4_A12.g1_A022 Loblolly pine ro... 68 5e-010
gb|CF479592.1|CF479592 RTWW3_11_G07.b1_A022 Well-watered lo... 68 5e-010
gb|DR098834.1|DR098834 STRR1_48_D12.b1_A033 Stem Response R... 68 5e-010
gb|CF478144.1|CF478144 RTWW3_19_G10.b1_A022 Well-watered lo... 66 2e-009
gb|CO172362.1|CO172362 NDL1_29_F06.b1_A029 Needles control ... 64 9e-009
gb|CO369374.1|CO369374 RTK1_46_E05.g1_A029 Roots minus pota... 64 9e-009
gb|DR055841.1|DR055841 RTCA1_26_F10.b1_A029 Roots minus cal... 64 9e-009
gb|AA739766.1|AA739766 531 PtIFG2 Pinus taeda cDNA clone 88... 56 2e-006
gb|BM158596.1|BM158596 NXLV_036_F10_F NXLV (Nsf Xylem Late ... 56 2e-006
gb|BQ198452.1|BQ198452 NXLV131_C03_F NXLV (Nsf Xylem Late w... 56 2e-006
gb|BQ698151.1|BQ698151 NXPV_067_B03_F NXPV (Nsf Xylem Plani... 56 2e-006
gb|CF388134.1|CF388134 RTDR2_1_A04.b1_A021 Loblolly pine ro... 56 2e-006
gb|CF476089.1|CF476089 RTWW2_21_B05.b1_A021 Well-watered lo... 56 2e-006
gb|CF669946.1|CF669946 RTCNT1_47_C08.b1_A029 Root control P... 56 2e-006
gb|CO172957.1|CO172957 NDL1_33_A12.b1_A029 Needles control ... 56 2e-006
gb|DR050824.1|DR050824 RTBOR1_25_H06.g1_A029 Roots plus add... 56 2e-006
gb|DR111303.1|DR111303 RTS1_16_F05.g1_A029 Roots minus sulf... 56 2e-006
gb|BE657004.1|BE657004 NXCI_046_C06_F NXCI (Nsf Xylem Compr... 54 8e-006
gb|BQ698231.1|BQ698231 NXPV_065_A06_F NXPV (Nsf Xylem Plani... 52 3e-005
gb|BG039013.1|BG039013 NXSI_024_E08_F NXSI (Nsf Xylem Side ... 50 1e-004
gb|CD021375.1|CD021375 NXNV_142_H02_F Nsf Xylem Normal wood... 50 1e-004
gb|AA739996.1|AA739996 761 PtIFG2 Pinus taeda cDNA clone 92... 40 0.12
gb|AA556240.1|AA556240 95 Loblolly pine CA Pinus taeda cDNA... 40 0.12
gb|AA556376.1|AA556376 231 Loblolly pine C Pinus taeda cDNA... 40 0.12
gb|AA556378.1|AA556378 233 Loblolly pine C Pinus taeda cDNA... 40 0.12
gb|AI812690.1|AI812690 17H7 Pine Lambda Zap Xylem library P... 40 0.12
gb|AW011329.1|AW011329 ST19E04 Pine TriplEx shoot tip libra... 40 0.12
gb|AW042590.1|AW042590 ST23F12 Pine TriplEx shoot tip libra... 40 0.12
gb|AW290470.1|AW290470 NXNV027C08F Nsf Xylem Normal wood Ve... 40 0.12
gb|AL751220.1|AL751220 AL751220 RS Pinus pinaster cDNA clon... 40 0.12
gb|BX250820.1|BX250820 BX250820 Pinus pinaster differenciat... 40 0.12
gb|BX251755.1|BX251755 BX251755 Pinus pinaster differenciat... 40 0.12
gb|BX252144.1|BX252144 BX252144 Pinus pinaster differenciat... 40 0.12
gb|BX253993.1|BX253993 BX253993 Pinus pinaster differenciat... 40 0.12
gb|BX254052.1|BX254052 BX254052 Pinus pinaster differenciat... 40 0.12
gb|BF517349.1|BF517349 NXSI_013_D11_F NXSI (Nsf Xylem Side ... 40 0.12
gb|BF518248.1|BF518248 NXSI_036_G10_F NXSI (Nsf Xylem Side ... 40 0.12
gb|BF609066.1|BF609066 NXSI_040_A08_F NXSI (Nsf Xylem Side ... 40 0.12
gb|BG040770.1|BG040770 NXSI_114_G09_F NXSI (Nsf Xylem Side ... 40 0.12
gb|BM159019.1|BM159019 NXLV_042_F11_F NXLV (Nsf Xylem Late ... 40 0.12
gb|BM428305.1|BM428305 NXRV_012_B07_F NXRV (Nsf Xylem Root ... 40 0.12
gb|BM903032.1|BM903032 NXLV_078_D02_F NXLV (Nsf Xylem Late ... 40 0.12
gb|BQ197740.1|BQ197740 NXLV115_D04_F NXLV (Nsf Xylem Late w... 40 0.12
gb|BQ633955.1|BQ633955 NXRV062_H08_F NXRV (Nsf Xylem Root w... 40 0.12
gb|BQ697157.1|BQ697157 NXPV_050_C01_F NXPV (Nsf Xylem Plani... 40 0.12
gb|BQ697158.1|BQ697158 NXPV_050_C02_F NXPV (Nsf Xylem Plani... 40 0.12
gb|BQ699796.1|BQ699796 NXRV129_D11_F NXRV (Nsf Xylem Root w... 40 0.12
gb|BQ700547.1|BQ700547 NXRV108_B05_F NXRV (Nsf Xylem Root w... 40 0.12
gb|CD027130.1|CD027130 NXNV027C08 Nsf Xylem Normal wood Ver... 40 0.12
gb|CF672315.1|CF672315 RTCNT1_62_F02.g1_A029 Root control P... 40 0.12
gb|BX679956.1|BX679956 BX679956 RS Pinus pinaster cDNA clon... 40 0.12
gb|BX680301.1|BX680301 BX680301 RS Pinus pinaster cDNA clon... 40 0.12
gb|CX648547.1|CX648547 COLD1_29_H01.b1_A029 Root cold Pinus... 40 0.12
gb|CX648626.1|CX648626 COLD1_29_H01.g1_A029 Root cold Pinus... 40 0.12
gb|CX648647.1|CX648647 COLD1_30_B04.b1_A029 Root cold Pinus... 40 0.12
gb|CX648722.1|CX648722 COLD1_30_B04.g1_A029 Root cold Pinus... 40 0.12
gb|CX649591.1|CX649591 COLD1_36_F02.b1_A029 Root cold Pinus... 40 0.12
gb|CX649670.1|CX649670 COLD1_36_F02.g1_A029 Root cold Pinus... 40 0.12
gb|DR014446.1|DR014446 HEAT1_49_C03.g1_A029 Root at 37 C fo... 40 0.12
gb|DR015147.1|DR015147 STRS1_1_F08.g1_A034 Shoot tip pitch ... 40 0.12
gb|DR015197.1|DR015197 STRS1_2_C01.b1_A034 Shoot tip pitch ... 40 0.12
gb|DR015277.1|DR015277 STRS1_2_C01.g1_A034 Shoot tip pitch ... 40 0.12
gb|DR015325.1|DR015325 STRS1_2_G03.g1_A034 Shoot tip pitch ... 40 0.12
gb|DR019734.1|DR019734 STRS1_32_C04.b1_A034 Shoot tip pitch... 40 0.12
gb|DR019807.1|DR019807 STRS1_32_C04.g1_A034 Shoot tip pitch... 40 0.12
gb|DR024397.1|DR024397 STRS1_64_E05.g1_A034 Shoot tip pitch... 40 0.12
gb|DR090603.1|DR090603 RTAL1_16_E07.b1_A029 Roots plus adde... 40 0.12
gb|DR090678.1|DR090678 RTAL1_16_E07.g1_A029 Roots plus adde... 40 0.12
gb|DR110669.1|DR110669 RTS1_12_F03.b1_A029 Roots minus sulf... 40 0.12
gb|DR110755.1|DR110755 RTS1_12_F03.g1_A029 Roots minus sulf... 40 0.12
gb|DR112364.1|DR112364 RTS1_27_E02.g1_A029 Roots minus sulf... 40 0.12
gb|DR118966.1|DR118966 RTMG1_20_G05.b1_A029 Roots minus mag... 40 0.12
gb|DR119048.1|DR119048 RTMG1_20_G05.g1_A029 Roots minus mag... 40 0.12
gb|DR181306.1|DR181306 RTMNUT1_38_C05.b2_A029 Roots minus m... 40 0.12
gb|DR181382.1|DR181382 RTMNUT1_38_C05.g2_A029 Roots minus m... 40 0.12
gb|DR384396.1|DR384396 RTHG1_2_A10.b1_A029 Roots plus added... 40 0.12
gb|DR384469.1|DR384469 RTHG1_2_A10.g1_A029 Roots plus added... 40 0.12
gb|DR386406.1|DR386406 RTHG1_15_B01.b1_A029 Roots plus adde... 40 0.12
gb|DR386604.1|DR386604 RTHG1_16_G02.b1_A029 Roots plus adde... 40 0.12
gb|DR386687.1|DR386687 RTHG1_16_G02.g1_A029 Roots plus adde... 40 0.12
gb|AW043194.1|AW043194 ST30D11 Pine TriplEx shoot tip libra... 38 0.49
gb|BE643866.1|BE643866 NXCI_048_C07_F NXCI (Nsf Xylem Compr... 38 0.49
gb|BQ655462.1|BQ655462 NXRV094_H06_F NXRV (Nsf Xylem Root w... 38 0.49
gb|DR013489.1|DR013489 HEAT1_19_D05.g1_A029 Root at 37 C fo... 38 0.49
gb|DR112994.1|DR112994 RTS1_32_E06.b1_A029 Roots minus sulf... 38 0.49
>gb|DN632011.1|DN632011 EST982827 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTACI37, mRNA sequence
Length = 808
Score = 232 bits (117), Expect = 2e-059
Identities = 357/437 (81%)
Strand = Plus / Plus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 299 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 358
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 359 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 418
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 419 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 478
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 479 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 538
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 539 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 598
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 599 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 658
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| || ||||| || ||||||||||||| ||| ||
Sbjct: 659 ctgattcccggggccggctcgctgagtaggcgctgagtttccttgatgattctgcgaggt 718
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 719 agattggcgttggccat 735
>gb|CF390333.1|CF390333 RTDR2_18_H07.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_18_H07_A021 5', mRNA
sequence
Length = 732
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 579 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 520
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 519 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 460
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 459 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 400
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 399 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 340
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 339 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 280
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 279 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 220
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 219 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 160
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 159 agattggcgttggccat 143
>gb|CF390646.1|CF390646 RTDR2_20_A10.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_20_A10_A021 5', mRNA
sequence
Length = 795
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 574 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 515
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 514 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 455
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 454 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 395
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 394 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 335
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 334 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 275
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 274 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 215
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 214 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 155
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 154 agattggcgttggccat 138
>gb|CF392858.1|CF392858 RTDR3_19_B12.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_19_B12_A022 5', mRNA
sequence
Length = 734
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 621 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 562
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 561 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 502
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 501 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 442
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 441 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 382
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 381 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 322
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 321 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 262
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 261 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 202
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 201 agattggcgttggccat 185
>gb|CF394590.1|CF394590 RTDS2_6_F03.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_6_F03_A021 5', mRNA sequence
Length = 735
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 584 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 525
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 524 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 465
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 464 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 405
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 404 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 345
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 344 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 285
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 284 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 225
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 224 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 165
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 164 agattggcgttggccat 148
>gb|CF471162.1|CF471162 RTDS1_16_G01.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_16_G01_A015 5', mRNA sequence
Length = 711
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 584 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 525
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 524 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 465
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 464 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 405
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 404 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 345
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 344 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 285
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 284 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 225
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 224 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 165
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 164 agattggcgttggccat 148
>gb|CF471914.1|CF471914 RTDS1_7_A07.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_7_A07_A015 5', mRNA sequence
Length = 796
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 561 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 502
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 501 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 442
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 441 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 382
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 381 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 322
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 321 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 262
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 261 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 202
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 201 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 142
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 141 agattggcgttggccat 125
>gb|CF474453.1|CF474453 RTWW2_20_G08.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_20_G08_A021 5', mRNA sequence
Length = 713
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 562 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 503
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 502 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 443
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 442 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 383
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 382 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 323
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 322 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 263
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 262 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 203
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 202 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 143
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 142 agattggcgttggccat 126
>gb|CF474564.1|CF474564 RTWW2_9_F07.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_9_F07_A021 5', mRNA sequence
Length = 724
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 579 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 520
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 519 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 460
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 459 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 400
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 399 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 340
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 339 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 280
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 279 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 220
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 219 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 160
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 159 agattggcgttggccat 143
>gb|CF476203.1|CF476203 RTWW2_21_B05.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_21_B05_A021 5', mRNA sequence
Length = 725
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 602 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 543
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 542 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 483
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 482 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 423
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 422 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 363
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 362 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 303
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 302 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 243
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 242 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 183
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 182 agattggcgttggccat 166
>gb|CF478197.1|CF478197 RTWW3_19_G10.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_19_G10_A022 5', mRNA sequence
Length = 785
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 545 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 486
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 485 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 426
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 425 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 366
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 365 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 306
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 305 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 246
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 245 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 186
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 185 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 126
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 125 agattggcgttggccat 109
>gb|CF479658.1|CF479658 RTWW3_11_G07.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_11_G07_A022 5', mRNA sequence
Length = 795
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 532 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 473
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 472 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 413
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 412 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 353
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 352 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 293
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 292 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 233
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 232 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 173
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 172 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 113
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 112 agattggcgttggccat 96
>gb|CF670017.1|CF670017 RTCNT1_47_C08.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_47_C08_A029 5', mRNA sequence
Length = 824
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 561 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 502
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 501 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 442
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 441 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 382
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 381 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 322
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 321 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 262
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 261 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 202
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 201 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 142
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 141 agattggcgttggccat 125
>gb|CF671674.1|CF671674 RTCNT1_58_C05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_58_C05_A029 5', mRNA sequence
Length = 795
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 554 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 495
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 494 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 435
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 434 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 375
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 374 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 315
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 314 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 255
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 254 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 195
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 194 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 135
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 134 agattggcgttggccat 118
>gb|CO159768.1|CO159768 FLD1_15_F02.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_15_F02_A029 5', mRNA sequence
Length = 854
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 614 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 555
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 554 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 495
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 494 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 435
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 434 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 375
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 374 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 315
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 314 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 255
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 254 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 195
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 194 agattggcgttggccat 178
>gb|CO160965.1|CO160965 FLD1_25_F03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_25_F03_A029 5', mRNA sequence
Length = 869
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 593 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 534
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 533 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 474
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 473 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 414
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 413 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 354
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 353 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 294
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 293 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 234
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 233 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 174
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 173 agattggcgttggccat 157
>gb|CO161236.1|CO161236 FLD1_27_B02.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_27_B02_A029 5', mRNA sequence
Length = 901
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 490 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 431
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 430 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 371
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 370 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 311
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 310 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 251
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 250 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 191
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 190 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 131
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 130 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 71
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 70 agattggcgttggccat 54
>gb|CO163592.1|CO163592 FLD1_42_C08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_42_C08_A029 5', mRNA sequence
Length = 865
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 552 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 493
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 492 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 433
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 432 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 373
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 372 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 313
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 312 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 253
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 252 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 193
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 192 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 133
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 132 agattggcgttggccat 116
>gb|CO172518.1|CO172518 NDL1_30_F02.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_30_F02_A029 3', mRNA sequence
Length = 682
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Plus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 104 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 163
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 164 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 223
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 224 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 283
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 284 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 343
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 344 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 403
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 404 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 463
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 464 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 523
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 524 agattggcgttggccat 540
>gb|CO172528.1|CO172528 NDL1_30_G02.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_30_G02_A029 3', mRNA sequence
Length = 694
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Plus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 116 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 175
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 176 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 235
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 236 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 295
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 296 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 355
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 356 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 415
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 416 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 475
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 476 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 535
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 536 agattggcgttggccat 552
>gb|CO173019.1|CO173019 NDL1_33_A12.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_33_A12_A029 5', mRNA sequence
Length = 712
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 563 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 504
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 503 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 444
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 443 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 384
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 383 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 324
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 323 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 264
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 263 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 204
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 203 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 144
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 143 agattggcgttggccat 127
>gb|CO199485.1|CO199485 GEO2_1_B11.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_1_B11_A032 5', mRNA sequence
Length = 719
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 539 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 480
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 479 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 420
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 419 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 360
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 359 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 300
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 299 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 240
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 239 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 180
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 179 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 120
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 119 agattggcgttggccat 103
>gb|CO362025.1|CO362025 NDL2_8_D09.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_8_D09_A029 5', mRNA sequence
Length = 787
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 544 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 485
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 484 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 425
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 424 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 365
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 364 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 305
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 304 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 245
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 244 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 185
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 184 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 125
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 124 agattggcgttggccat 108
>gb|CO369623.1|CO369623 RTK1_48_H05.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_48_H05_A029 3', mRNA sequence
Length = 831
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 445 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 386
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 385 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 326
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 325 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 266
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 265 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 206
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 205 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 146
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 145 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 86
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 85 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 26
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 25 agattggcgttggccat 9
>gb|CO369704.1|CO369704 RTK1_48_H05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_48_H05_A029 5', mRNA sequence
Length = 727
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 562 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 503
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 502 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 443
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 442 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 383
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 382 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 323
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 322 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 263
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 262 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 203
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 202 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 143
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 142 agattggcgttggccat 126
>gb|CX650465.1|CX650465 COLD1_45_H01.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_45_H01_A029 5', mRNA sequence
Length = 832
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Plus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 376 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 435
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 436 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 495
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 496 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 555
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 556 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 615
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 616 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 675
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 676 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 735
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 736 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 795
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 796 agattggcgttggccat 812
>gb|DN453990.1|DN453990 EST949789 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIFY73 5' end, mRNA sequence
Length = 880
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 567 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 508
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 507 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 448
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 447 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 388
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 387 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 328
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 327 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 268
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 267 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 208
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 207 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 148
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 147 agattggcgttggccat 131
>gb|DN629517.1|DN629517 EST980333 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTABG06, mRNA sequence
Length = 766
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 568 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 509
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 508 ttttctgaaagtggatcatcgggattgggagcactcaacaatgcttggatgctcagcaaa 449
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 448 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 389
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 388 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 329
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 328 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 269
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 268 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 209
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 208 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 149
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 148 agattggcgttggccat 132
>gb|DR015001.1|DR015001 HEAT1_52_H07.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_52_H07_A029 5', mRNA sequence
Length = 841
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 563 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 504
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 503 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 444
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 443 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 384
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 383 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 324
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 323 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 264
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 263 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 204
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 203 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 144
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 143 agattggcgttggccat 127
>gb|DR050737.1|DR050737 RTBOR1_25_H06.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_25_H06_A029 3', mRNA sequence
Length = 881
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Plus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 306 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 365
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 366 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 425
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 426 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 485
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 486 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 545
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 546 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 605
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 606 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 665
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 666 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 725
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 726 agattggcgttggccat 742
>gb|DR051022.1|DR051022 RTBOR1_27_E03.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_27_E03_A029 3', mRNA sequence
Length = 849
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Plus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 278 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 337
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 338 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 397
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 398 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 457
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 458 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 517
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 518 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 577
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 578 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 637
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 638 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 697
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 698 agattggcgttggccat 714
>gb|DR051825.1|DR051825 RTBOR1_32_D07.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_32_D07_A029 5', mRNA sequence
Length = 685
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 560 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 501
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 500 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 441
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 440 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 381
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 380 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 321
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 320 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 261
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 260 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 201
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 200 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 141
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 140 agattggcgttggccat 124
>gb|DR069352.1|DR069352 RTDK1_6_E09.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_6_E09_A029 5', mRNA sequence
Length = 863
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Plus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 266 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 325
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 326 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 385
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 386 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 445
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 446 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 505
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 506 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 565
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 566 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 625
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 626 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 685
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 686 agattggcgttggccat 702
>gb|DR070016.1|DR070016 RTDK1_10_F07.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_10_F07_A029 5', mRNA sequence
Length = 690
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 544 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 485
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 484 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 425
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 424 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 365
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 364 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 305
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 304 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 245
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 244 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 185
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 184 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 125
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 124 agattggcgttggccat 108
>gb|DR071865.1|DR071865 RTDK1_22_C05.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_22_C05_A029 5', mRNA sequence
Length = 716
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 593 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 534
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 533 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 474
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 473 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 414
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 413 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 354
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 353 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 294
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 293 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 234
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 233 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 174
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 173 agattggcgttggccat 157
>gb|DR080599.1|DR080599 RTFEPL1_23_G06.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_23_G06_A029 5', mRNA sequence
Length = 655
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 562 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 503
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 502 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 443
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 442 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 383
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 382 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 323
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 322 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 263
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 262 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 203
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 202 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 143
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 142 agattggcgttggccat 126
>gb|DR092849.1|DR092849 STRR1_4_A03.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_4_A03_A033 5', mRNA sequence
Length = 870
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 564 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 505
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 504 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 445
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 444 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 385
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 384 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 325
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 324 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 265
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 264 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 205
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 204 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 145
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 144 agattggcgttggccat 128
>gb|DR095701.1|DR095701 STRR1_23_B08.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_23_B08_A033 3', mRNA sequence
Length = 787
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 491 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 432
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 431 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 372
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 371 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 312
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 311 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 252
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 251 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 192
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 191 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 132
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 131 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 72
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 71 agattggcgttggccat 55
>gb|DR095772.1|DR095772 STRR1_23_B08.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_23_B08_A033 5', mRNA sequence
Length = 773
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 582 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 523
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 522 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 463
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 462 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 403
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 402 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 343
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 342 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 283
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 282 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 223
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 222 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 163
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 162 agattggcgttggccat 146
>gb|DR096537.1|DR096537 STRR1_28_D02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_28_D02_A033 5', mRNA sequence
Length = 826
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 718 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 659
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 658 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 599
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 598 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 539
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 538 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 479
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 478 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 419
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 418 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 359
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 358 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 299
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 298 agattggcgttggccat 282
>gb|DR098906.1|DR098906 STRR1_48_D12.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_48_D12_A033 5', mRNA sequence
Length = 712
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 505 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 446
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 445 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 386
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 385 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 326
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 325 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 266
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 265 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 206
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 205 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 146
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 145 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 86
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 85 agattggcgttggccat 69
>gb|DR111086.1|DR111086 RTS1_15_D08.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_15_D08_A029 3', mRNA sequence
Length = 627
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Plus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 14 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 73
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 74 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 133
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 134 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 193
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 194 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 253
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 254 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 313
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 314 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 373
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 374 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 433
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 434 agattggcgttggccat 450
>gb|DR118368.1|DR118368 RTMG1_12_G11.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_12_G11_A029 5', mRNA sequence
Length = 689
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 544 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 485
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 484 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 425
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 424 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 365
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 364 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 305
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 304 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 245
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 244 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 185
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 184 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 125
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 124 agattggcgttggccat 108
>gb|DR165215.1|DR165215 RTPHOS1_3_A06.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_3_A06_A029 5', mRNA sequence
Length = 730
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 609 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 550
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 549 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 490
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 489 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 430
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 429 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 370
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 369 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 310
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 309 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 250
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 249 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 190
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 189 agattggcgttggccat 173
>gb|DR180620.1|DR180620 RTMNUT1_33_F07.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_33_F07_A029 5', mRNA sequence
Length = 814
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 540 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 481
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 480 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 421
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 420 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 361
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 360 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 301
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 300 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 241
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 240 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 181
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 180 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 121
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 120 agattggcgttggccat 104
>gb|DR180898.1|DR180898 RTMNUT1_35_C02.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_35_C02_A029 5', mRNA sequence
Length = 860
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 502 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 443
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 442 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 383
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 382 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 323
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 322 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 263
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 262 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 203
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 202 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 143
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 142 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 83
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 82 agattggcgttggccat 66
>gb|DT625059.1|DT625059 EST1159334 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAL46 5' end, mRNA sequence
Length = 945
Score = 224 bits (113), Expect = 4e-057
Identities = 356/437 (81%)
Strand = Plus / Minus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 567 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 508
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 507 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 448
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 447 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 388
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 387 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 328
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 327 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 268
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 267 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 208
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 207 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 148
Query: 670 agattgctgttggccat 686
|||||| |||||||||
Sbjct: 147 agattggcgttggccat 131
>gb|CO369294.1|CO369294 RTK1_46_E05.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_46_E05_A029 3', mRNA sequence
Length = 865
Score = 218 bits (110), Expect = 2e-055
Identities = 347/426 (81%)
Strand = Plus / Plus
Query: 250 gtccactccttcgctgtctcaacagcttcagcttcgttggatttccagtgtttcgcaatg 309
||||| ||||| ||||| || ||||| || ||||||| | |||||||||||| ||||||
Sbjct: 280 gtccattccttggctgtttccacagcctcgacttcgtttgctttccagtgtttggcaatg 339
Query: 310 ttgtctgagagaggatcatctgggtttggggcgctcagaagtgcctgaatgctcagtaga 369
|| ||||| || |||||||| || || || || |||| | ||| || |||||||| | |
Sbjct: 340 ttttctgaaagtggatcatcaggattgggagcactcaacaatgcttggatgctcagcaaa 399
Query: 370 actgtacgtatctgaagagctggactccatttgtccttaagaatgtcgaggcatatccta 429
||||| || || |||||||| || |||||||| ||||| |||||||| || ||||||| |
Sbjct: 400 actgttcgaatttgaagagcagggctccatttatcctttagaatgtctagacatatccga 459
Query: 430 ccaagcttgtcaatattaggatggtaaatttttgtgagaaatctaacttttggggcagcc 489
|| |||||||||||||| |||||||| || ||||| | ||||| || ||||| ||||||
Sbjct: 460 cctagcttgtcaatatttggatggtatatctttgtcaaaaatcggacctttggagcagcc 519
Query: 490 attggatattcctcaggcaagaatagttcaagcttgaaaactccaccttcatagggtgac 549
||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| || |||
Sbjct: 520 attggatattcttcaggtaagaatagctccagcttgaaaacaccaccttcatatggagac 579
Query: 550 tgcgcggggccaaggatcatgacattgaagtaccgcatattctcctccgacggcgacgcg 609
|| | || ||||| ||||| ||||||||||| ||||| || ||||| || || || ||
Sbjct: 580 tgagtaggtccaagaatcatcacattgaagtatcgcatgttttcctctgagggagatgca 639
Query: 610 ctaatccccggtgctggttcgctgagaagccgctgcgtctccttgatgattcggcgcggg 669
|| || ||||| || || |||||||| | ||||| || ||||||||||||| ||| ||
Sbjct: 640 ctgattcccggggccggctcgctgagtaagcgctgagtttccttgatgattctgcgaggt 699
Query: 670 agattg 675
||||||
Sbjct: 700 agattg 705
>gb|CX649658.1|CX649658 COLD1_36_E02.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_36_E02_A029 5', mRNA sequence
Length = 507
Score = 218 bits (110), Expect = 2e-055
Identities = 332/406 (81%)
Strand = Plus / Minus
Query: 281 cttcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttgggg 340
||||||| | |||||||||||| |||||||| ||||| || |||||||| || || || |
Sbjct: 485 cttcgtttgctttccagtgtttggcaatgttttctgaaagtggatcatcaggattgggag 426
Query: 341 cgctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatt 400
| |||| | ||| || |||||||| | |||||| || || |||||||| || |||||||
Sbjct: 425 cactcaacaatgcttggatgctcagcaaaactgttcgaatttgaagagcagggctccatt 366
Query: 401 tgtccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattt 460
| ||||| |||||||| || ||||||| ||| |||||||||||||| |||||||| || |
Sbjct: 365 tatcctttagaatgtctagacatatccgacctagcttgtcaatatttggatggtatatct 306
Query: 461 ttgtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaa 520
|||| | ||||| || ||||| ||||||||||||||||| ||||| |||||||| || |
Sbjct: 305 ttgtcaaaaatcggacctttggagcagccattggatattcttcaggtaagaatagctcca 246
Query: 521 gcttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagt 580
|||||||||| ||||||||||| || ||||| | || ||||| ||||| ||||||||||
Sbjct: 245 gcttgaaaacaccaccttcatatggagactgagtaggtccaagaatcatcacattgaagt 186
Query: 581 accgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagcc 640
| ||||| || ||||| || || || || || || ||||| || || |||||||| | |
Sbjct: 185 atcgcatgttttcctctgagggagatgcactgattcccggggccggctcgctgagtaagc 126
Query: 641 gctgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|||| || ||||||||||||| ||| || |||||| |||||||||
Sbjct: 125 gctgagtttccttgatgattctgcgaggtagattggcgttggccat 80
>gb|DR012151.1|DR012151 HEAT1_10_C06.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_10_C06_A029 5', mRNA sequence
Length = 530
Score = 218 bits (110), Expect = 2e-055
Identities = 332/406 (81%)
Strand = Plus / Minus
Query: 281 cttcgttggatttccagtgtttcgcaatgttgtctgagagaggatcatctgggtttgggg 340
||||||| | |||||||||||| |||||||| ||||| || |||||||| || || || |
Sbjct: 528 cttcgtttgctttccagtgtttggcaatgttttctgaaagtggatcatcaggattgggag 469
Query: 341 cgctcagaagtgcctgaatgctcagtagaactgtacgtatctgaagagctggactccatt 400
| |||| | ||| || |||||||| | |||||| || || |||||||| || |||||||
Sbjct: 468 cactcaacaatgcttggatgctcagcaaaactgttcgaatttgaagagcagggctccatt 409
Query: 401 tgtccttaagaatgtcgaggcatatcctaccaagcttgtcaatattaggatggtaaattt 460
| ||||| |||||||| || ||||||| ||| |||||||||||||| |||||||| || |
Sbjct: 408 tatcctttagaatgtctagacatatccgacctagcttgtcaatatttggatggtatatct 349
Query: 461 ttgtgagaaatctaacttttggggcagccattggatattcctcaggcaagaatagttcaa 520
|||| | ||||| || ||||| ||||||||||||||||| ||||| |||||||| || |
Sbjct: 348 ttgtcaaaaatcggacctttggagcagccattggatattcttcaggtaagaatagctcca 289
Query: 521 gcttgaaaactccaccttcatagggtgactgcgcggggccaaggatcatgacattgaagt 580
|||||||||| ||||||||||| || ||||| | || ||||| ||||| ||||||||||
Sbjct: 288 gcttgaaaacaccaccttcatatggagactgagtaggtccaagaatcatcacattgaagt 229
Query: 581 accgcatattctcctccgacggcgacgcgctaatccccggtgctggttcgctgagaagcc 640
| ||||| || ||||| || || || || || || ||||| || || |||||||| | |
Sbjct: 228 atcgcatgttttcctctgagggagatgcactgattcccggggccggctcgctgagtaagc 169
Query: 641 gctgcgtctccttgatgattcggcgcgggagattgctgttggccat 686
|||| || ||||||||||||| ||| || |||||| |||||||||
Sbjct: 168 gctgagtttccttgatgattctgcgaggtagattggcgttggccat 123
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 77,896
Number of Sequences: 355925
Number of extensions: 77896
Number of successful extensions: 21775
Number of sequences better than 0.5: 246
Number of HSP's better than 0.5 without gapping: 246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 21394
Number of HSP's gapped (non-prelim): 255
length of query: 730
length of database: 217,277,237
effective HSP length: 19
effective length of query: 711
effective length of database: 210,514,662
effective search space: 149675924682
effective search space used: 149675924682
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)