BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2619346.2.2
(1471 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ655398.1|BQ655398 NXRV093_H03_F NXRV (Nsf Xylem Root w... 76 5e-012
gb|CF472789.1|CF472789 RTDS1_11_C02.g1_A015 Drought-stresse... 76 5e-012
gb|CF473406.1|CF473406 RTWW2_2_C10.g1_A021 Well-watered lob... 76 5e-012
gb|CX651152.1|CX651152 COLD1_50_B04.g1_A029 Root cold Pinus... 76 5e-012
gb|DR070353.1|DR070353 RTDK1_12_F11.g1_A029 Roots, dark Pin... 76 5e-012
gb|DR081109.1|DR081109 RTFEPL1_27_A11.g1_A029 Roots plus ad... 76 5e-012
gb|CO173325.1|CO173325 NDL1_35_B03.g1_A029 Needles control ... 72 7e-011
gb|DR117988.1|DR117988 RTMG1_10_A11.g1_A029 Roots minus mag... 72 7e-011
gb|BX254718.1|BX254718 BX254718 Pinus pinaster differenciat... 60 3e-007
gb|CX651082.1|CX651082 COLD1_50_B04.b1_A029 Root cold Pinus... 60 3e-007
gb|CF471753.1|CF471753 RTDS1_6_F06.g1_A015 Drought-stressed... 58 1e-006
gb|CO160830.1|CO160830 FLD1_24_F09.g1_A029 Root flooded Pin... 58 1e-006
gb|CO172424.1|CO172424 NDL1_29_D09.g1_A029 Needles control ... 58 1e-006
gb|DR014914.1|DR014914 HEAT1_52_H06.b1_A029 Root at 37 C fo... 58 1e-006
gb|DR015000.1|DR015000 HEAT1_52_H06.g1_A029 Root at 37 C fo... 58 1e-006
gb|BF186408.1|BF186408 NXCI_137_A08_F NXCI (Nsf Xylem Compr... 56 4e-006
gb|BM492803.1|BM492803 NXRV_031_C05_F NXRV (Nsf Xylem Root ... 56 4e-006
gb|BF186410.1|BF186410 NXCI_137_A09_F NXCI (Nsf Xylem Compr... 50 3e-004
gb|DR058037.1|DR058037 RTNIT1_9_G06.b1_A029 Roots minus nit... 48 0.001
emb|CR377871.1| Pinus pinaster SSR, clone PPB3A06 48 0.001
emb|CR377872.1| Pinus pinaster SSR, clone PPB3A06r 48 0.001
gb|BX678974.1|BX678974 BX678974 RS Pinus pinaster cDNA clon... 46 0.004
gb|BX679248.1|BX679248 BX679248 RS Pinus pinaster cDNA clon... 46 0.004
gb|BX679283.1|BX679283 BX679283 RS Pinus pinaster cDNA clon... 46 0.004
gb|BX680516.1|BX680516 BX680516 RS Pinus pinaster cDNA clon... 46 0.004
gb|CF387221.1|CF387221 RTDR1_11_A11.g1_A015 Loblolly pine r... 44 0.016
gb|CF401620.1|CF401620 RTWW1_13_G10.g1_A015 Well-watered lo... 44 0.016
gb|DR050498.1|DR050498 RTBOR1_23_H11.g1_A029 Roots plus add... 44 0.016
gb|DR056656.1|DR056656 RTCA1_31_E08.g1_A029 Roots minus cal... 44 0.016
gb|DR090249.1|DR090249 RTAL1_13_E12.g1_A029 Roots plus adde... 44 0.016
gb|DR118950.1|DR118950 RTMG1_20_E09.b1_A029 Roots minus mag... 44 0.016
gb|DR119031.1|DR119031 RTMG1_20_E09.g1_A029 Roots minus mag... 44 0.016
gb|CO165521.1|CO165521 FLD1_55_C10.b1_A029 Root flooded Pin... 42 0.064
gb|CV035142.1|CV035142 RTNACL1_13_H02.g1_A029 Roots plus ad... 42 0.064
gb|AY867635.1| Pinus taeda isolate FBRC6 putative cell-wall... 42 0.064
gb|AY867640.1| Pinus taeda isolate FBRC31 putative cell-wal... 42 0.064
gb|AY867649.1| Pinus taeda isolate FBRC10 putative cell-wal... 42 0.064
gb|AY867661.1| Pinus taeda isolate FBRC29 putative cell-wal... 42 0.064
gb|CF385312.1|CF385312 RTDR1_3_B03.b1_A015 Loblolly pine ro... 40 0.25
gb|CO201172.1|CO201172 RTCNT2_4_C08.b1_A029 Root control 2 ... 40 0.25
gb|DR182335.1|DR182335 RTMNUT1_44_H05.b1_A029 Roots minus m... 40 0.25
emb|CR378126.1| Pinus pinaster SSR, clone PPB2H06 40 0.25
>gb|BQ655398.1|BQ655398 NXRV093_H03_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV093_H03 5' similar to Arabidopsis thaliana
sequence At5g26690 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 665
Score = 75.8 bits (38), Expect = 5e-012
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 664 cctaagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaag 723
||||| || ||||||||||||||||| ||||| || || |||| |||| | || ||
Sbjct: 321 cctaaacctgagcctaagcctgagcctaaacctgagcctgagcctaagcctgagcctaaa 380
Query: 724 cctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaa 783
|||||||||||||| ||||| ||||| ||||| || || |||||||| || ||||| |||
Sbjct: 381 cctgagcctaaacctgaaccgaaacctgagcctaaacctgagcctaaacctgaacctaaa 440
Query: 784 ccagagccaaagcctgagcctaaacc 809
|| ||||| || ||||| ||||||||
Sbjct: 441 cctgagcctaaacctgaacctaaacc 466
Score = 67.9 bits (34), Expect = 1e-009
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 610 cctaagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaag 669
||||| || ||||||||||| || || ||||| ||||| ||||| ||||| ||||| ||
Sbjct: 297 cctaaacctgagcctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgag 356
Query: 670 ccagagcctaagcctgagccgaaacc 695
|| ||||||||||||||||| |||||
Sbjct: 357 cctgagcctaagcctgagcctaaacc 382
Score = 60.0 bits (30), Expect = 3e-007
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccag 553
|||| ||||||||||| ||||| |||||||| || |||| ||||||||| || || || |
Sbjct: 385 agcctaaacctgaaccgaaacctgagcctaaacctgagcctaaacctgaacctaaacctg 444
Query: 554 agcctaaacc 563
||||||||||
Sbjct: 445 agcctaaacc 454
Score = 60.0 bits (30), Expect = 3e-007
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 1058 agccagagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
|||| |||||||||||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 355 agcctgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcc 412
Score = 60.0 bits (30), Expect = 3e-007
Identities = 87/106 (82%)
Strand = Plus / Plus
Query: 596 aaccaaaaccagagcctaagccagagcctaaacccgaaccgaaaccggagccaaagccag 655
|||| ||||| |||||||| || ||||||||||| || || || || ||||| || || |
Sbjct: 295 aacctaaacctgagcctaaacctgagcctaaacctgagcctaagcctgagcctaaacctg 354
Query: 656 agccccaacctaagccagagcctaagcctgagccgaaaccagaacc 701
|||| | |||||||| |||||||| |||||||| ||||| |||||
Sbjct: 355 agcctgagcctaagcctgagcctaaacctgagcctaaacctgaacc 400
Score = 60.0 bits (30), Expect = 3e-007
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 506 aaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagcctaaacc 563
|||| ||||| |||||||| || |||| |||||||||||| ||||| |||||||||||
Sbjct: 295 aacctaaacctgagcctaaacctgagcctaaacctgagcctaagcctgagcctaaacc 352
Score = 56.0 bits (28), Expect = 4e-006
Identities = 121/152 (79%)
Strand = Plus / Plus
Query: 664 cctaagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaag 723
||||| || |||||||| |||||||| || || || || || || ||||| | || |||
Sbjct: 309 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcctgagcctaag 368
Query: 724 cctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaa 783
|||||||||||||| || || ||||| || || || || |||||||| || || || |||
Sbjct: 369 cctgagcctaaacctgagcctaaacctgaaccgaaacctgagcctaaacctgagcctaaa 428
Query: 784 ccagagccaaagcctgagcctaaacccgaacc 815
|| || || || |||||||||||||| |||||
Sbjct: 429 cctgaacctaaacctgagcctaaacctgaacc 460
Score = 56.0 bits (28), Expect = 4e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagcc 545
|||| |||||||| || ||||| ||||||||||| |||| ||||||||||||
Sbjct: 307 agcctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcc 358
Score = 56.0 bits (28), Expect = 4e-006
Identities = 118/148 (79%)
Strand = Plus / Plus
Query: 662 aacctaagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaa 721
||||||| || |||||||| |||||||| ||||| || || ||||| ||||| ||||
Sbjct: 295 aacctaaacctgagcctaaacctgagcctaaacctgagcctaagcctgagcctaaacctg 354
Query: 722 agcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaa 781
||||||||||||| || || || ||||| ||||| || || || || || || || || |
Sbjct: 355 agcctgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagccta 414
Query: 782 aaccagagccaaagcctgagcctaaacc 809
|||| ||||| || ||||| ||||||||
Sbjct: 415 aacctgagcctaaacctgaacctaaacc 442
Score = 52.0 bits (26), Expect = 7e-005
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 534 taaacctgagccaaagccagagcctaaacccaaaccgaaaccagagccaaagccagagcc 593
|||||||||||| || || ||||||||||| | || || || ||||| || || |||||
Sbjct: 299 taaacctgagcctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcc 358
Query: 594 acaaccaaaaccagagcctaagccagagcctaaacccgaaccgaaaccggagcc 647
| || || || |||||||| || ||||||||||| ||||||||||| |||||
Sbjct: 359 tgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcc 412
Score = 48.1 bits (24), Expect = 0.001
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 596 aaccaaaaccagagcctaagccagagcctaaacccgaaccgaaaccggagcc 647
|||| ||||| |||||||| || ||||||||||| ||||| ||||| |||||
Sbjct: 397 aaccgaaacctgagcctaaacctgagcctaaacctgaacctaaacctgagcc 448
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaacc 1109
|||||||| ||||| || ||||| ||||||||||| ||||| |||||
Sbjct: 420 gagcctaaacctgaacctaaacctgagcctaaacctgaacctaaacc 466
Score = 44.1 bits (22), Expect = 0.016
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 524 agccagagcataaacctgagccaaagccagagcctaaacccaaaccgaaaccagagcc 581
|||| |||| ||| |||||||| || || ||||||||||| |||||||||| |||||
Sbjct: 355 agcctgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcc 412
Score = 42.1 bits (21), Expect = 0.064
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctga 542
|||| ||||||||||| ||||| |||||||| || || | |||||||||
Sbjct: 421 agcctaaacctgaacctaaacctgagcctaaacctgaacctaaacctga 469
Score = 42.1 bits (21), Expect = 0.064
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 499 aaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagcct 558
|||||||| || ||||| |||||||| || || | |||||||||||| || || || |||
Sbjct: 402 aaacctgagcctaaacctgagcctaaacctgaacctaaacctgagcctaaacctgaacct 461
Query: 559 aaacc 563
|||||
Sbjct: 462 aaacc 466
Score = 42.1 bits (21), Expect = 0.064
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 931 gagcctaagcccgaaccaaaaccaaagccaaagcctgagcctaaacccgaacc 983
|||||||| || ||||| ||||| |||| || |||||||||||||| |||||
Sbjct: 384 gagcctaaacctgaaccgaaacctgagcctaaacctgagcctaaacctgaacc 436
Score = 42.1 bits (21), Expect = 0.064
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 517 gagcctaagccagagcataaacctgagcc 545
||||||||||| |||| ||||||||||||
Sbjct: 360 gagcctaagcctgagcctaaacctgagcc 388
Score = 40.1 bits (20), Expect = 0.25
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacctgaaccaaaacc 1031
|||| ||||| || || ||||||||||||||||| |||||
Sbjct: 427 aacctgaacctaaacctgagcctaaacctgaacctaaacc 466
Score = 40.1 bits (20), Expect = 0.25
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 1072 cctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 405 cctgagcctaaacctgagcctaaacctgaacctaaacctgagcc 448
Score = 40.1 bits (20), Expect = 0.25
Identities = 65/80 (81%)
Strand = Plus / Plus
Query: 502 cctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagcctaaa 561
||||| || ||||| |||||||| || || | ||||||||||| || || |||||||||
Sbjct: 369 cctgagcctaaacctgagcctaaacctgaaccgaaacctgagcctaaacctgagcctaaa 428
Query: 562 cccaaaccgaaaccagagcc 581
|| |||| ||||| |||||
Sbjct: 429 cctgaacctaaacctgagcc 448
>gb|CF472789.1|CF472789 RTDS1_11_C02.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_11_C02_A015 5', mRNA sequence
Length = 660
Score = 75.8 bits (38), Expect = 5e-012
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 664 cctaagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaag 723
||||| || ||||||||||||||||| ||||| || || |||| |||| | || ||
Sbjct: 162 cctaaacctgagcctaagcctgagcctaaacctgagcctgagcctaagcctgagcctaaa 221
Query: 724 cctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaa 783
|||||||||||||| ||||| ||||| ||||| || || |||||||| || ||||| |||
Sbjct: 222 cctgagcctaaacctgaaccgaaacctgagcctaaacctgagcctaaacctgaacctaaa 281
Query: 784 ccagagccaaagcctgagcctaaacc 809
|| ||||| || ||||| ||||||||
Sbjct: 282 cctgagcctaaacctgaacctaaacc 307
Score = 60.0 bits (30), Expect = 3e-007
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccag 553
|||| ||||||||||| ||||| |||||||| || |||| ||||||||| || || || |
Sbjct: 226 agcctaaacctgaaccgaaacctgagcctaaacctgagcctaaacctgaacctaaacctg 285
Query: 554 agcctaaacc 563
||||||||||
Sbjct: 286 agcctaaacc 295
Score = 60.0 bits (30), Expect = 3e-007
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 1058 agccagagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
|||| |||||||||||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 196 agcctgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcc 253
Score = 60.0 bits (30), Expect = 3e-007
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 622 cctaaacccgaaccgaaaccggagccaaagccagagccccaacctaagccagagcctaag 681
|||||||| || || ||||| ||||| ||||| ||||| ||||| |||| |||||||||
Sbjct: 150 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcctgagcctaag 209
Query: 682 cctgagccgaaacc 695
|||||||| |||||
Sbjct: 210 cctgagcctaaacc 223
Score = 60.0 bits (30), Expect = 3e-007
Identities = 123/154 (79%)
Strand = Plus / Plus
Query: 662 aacctaagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaa 721
||||||| || |||||||| |||||||| || || || || || || ||||| | || |
Sbjct: 148 aacctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcctgagccta 207
Query: 722 agcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaa 781
|||||||||||||||| || || ||||| || || || || |||||||| || || || |
Sbjct: 208 agcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcctaaacctgagccta 267
Query: 782 aaccagagccaaagcctgagcctaaacccgaacc 815
|||| || || || |||||||||||||| |||||
Sbjct: 268 aacctgaacctaaacctgagcctaaacctgaacc 301
Score = 56.0 bits (28), Expect = 4e-006
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 490 ccaaagccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagcc 545
||||| || |||||||| || ||||| ||||||||||| |||| ||||||||||||
Sbjct: 144 ccaaaacctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcc 199
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 607 gagcctaagccagagcctaaacccgaaccgaaaccggagcc 647
|||||||| || ||||||||||| ||||||||||| |||||
Sbjct: 213 gagcctaaacctgagcctaaacctgaaccgaaacctgagcc 253
Score = 48.1 bits (24), Expect = 0.001
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 596 aaccaaaaccagagcctaagccagagcctaaacccgaaccgaaaccggagcc 647
|||| ||||| |||||||| || ||||||||||| ||||| ||||| |||||
Sbjct: 238 aaccgaaacctgagcctaaacctgagcctaaacctgaacctaaacctgagcc 289
Score = 48.1 bits (24), Expect = 0.001
Identities = 75/92 (81%)
Strand = Plus / Plus
Query: 610 cctaagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaag 669
||||| || ||||||||||| || || || || ||||| || || ||||| | ||||||
Sbjct: 150 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcctgagcctaag 209
Query: 670 ccagagcctaagcctgagccgaaaccagaacc 701
|| |||||||| |||||||| ||||| |||||
Sbjct: 210 cctgagcctaaacctgagcctaaacctgaacc 241
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 520 cctaagccagagcataaacctgagccaaagccagagcctaaacc 563
||||| || |||| |||||||||||| ||||| |||||||||||
Sbjct: 150 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacc 193
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaacc 1109
|||||||| ||||| || ||||| ||||||||||| ||||| |||||
Sbjct: 261 gagcctaaacctgaacctaaacctgagcctaaacctgaacctaaacc 307
Score = 44.1 bits (22), Expect = 0.016
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 524 agccagagcataaacctgagccaaagccagagcctaaacccaaaccgaaaccagagcc 581
|||| |||| ||| |||||||| || || ||||||||||| |||||||||| |||||
Sbjct: 196 agcctgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcc 253
Score = 42.1 bits (21), Expect = 0.064
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctga 542
|||| ||||||||||| ||||| |||||||| || || | |||||||||
Sbjct: 262 agcctaaacctgaacctaaacctgagcctaaacctgaacctaaacctga 310
Score = 42.1 bits (21), Expect = 0.064
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 499 aaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagcct 558
|||||||| || ||||| |||||||| || || | |||||||||||| || || || |||
Sbjct: 243 aaacctgagcctaaacctgagcctaaacctgaacctaaacctgagcctaaacctgaacct 302
Query: 559 aaacc 563
|||||
Sbjct: 303 aaacc 307
Score = 42.1 bits (21), Expect = 0.064
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 931 gagcctaagcccgaaccaaaaccaaagccaaagcctgagcctaaacccgaacc 983
|||||||| || ||||| ||||| |||| || |||||||||||||| |||||
Sbjct: 225 gagcctaaacctgaaccgaaacctgagcctaaacctgagcctaaacctgaacc 277
Score = 42.1 bits (21), Expect = 0.064
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 517 gagcctaagccagagcataaacctgagcc 545
||||||||||| |||| ||||||||||||
Sbjct: 201 gagcctaagcctgagcctaaacctgagcc 229
Score = 42.1 bits (21), Expect = 0.064
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 601 aaaccagagcctaagccagagcctaaacc 629
||||| ||||||||||| |||||||||||
Sbjct: 165 aaacctgagcctaagcctgagcctaaacc 193
Score = 40.1 bits (20), Expect = 0.25
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacctgaaccaaaacc 1031
|||| ||||| || || ||||||||||||||||| |||||
Sbjct: 268 aacctgaacctaaacctgagcctaaacctgaacctaaacc 307
Score = 40.1 bits (20), Expect = 0.25
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 1072 cctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 246 cctgagcctaaacctgagcctaaacctgaacctaaacctgagcc 289
Score = 40.1 bits (20), Expect = 0.25
Identities = 65/80 (81%)
Strand = Plus / Plus
Query: 502 cctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagcctaaa 561
||||| || ||||| |||||||| || || | ||||||||||| || || |||||||||
Sbjct: 210 cctgagcctaaacctgagcctaaacctgaaccgaaacctgagcctaaacctgagcctaaa 269
Query: 562 cccaaaccgaaaccagagcc 581
|| |||| ||||| |||||
Sbjct: 270 cctgaacctaaacctgagcc 289
>gb|CF473406.1|CF473406 RTWW2_2_C10.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_2_C10_A021 5', mRNA sequence
Length = 708
Score = 75.8 bits (38), Expect = 5e-012
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 664 cctaagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaag 723
||||| || ||||||||||||||||| ||||| || || |||| |||| | || ||
Sbjct: 302 cctaaacctgagcctaagcctgagcctaaacctgagcctgagcctaagcctgagcctaaa 361
Query: 724 cctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaa 783
|||||||||||||| ||||| ||||| ||||| || || |||||||| || ||||| |||
Sbjct: 362 cctgagcctaaacctgaaccgaaacctgagcctaaacctgagcctaaacctgaacctaaa 421
Query: 784 ccagagccaaagcctgagcctaaacc 809
|| ||||| || ||||| ||||||||
Sbjct: 422 cctgagcctaaacctgaacctaaacc 447
Score = 67.9 bits (34), Expect = 1e-009
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 610 cctaagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaag 669
||||| || ||||||||||| || || ||||| ||||| ||||| ||||| ||||| ||
Sbjct: 278 cctaaacctgagcctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgag 337
Query: 670 ccagagcctaagcctgagccgaaacc 695
|| ||||||||||||||||| |||||
Sbjct: 338 cctgagcctaagcctgagcctaaacc 363
Score = 60.0 bits (30), Expect = 3e-007
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccag 553
|||| ||||||||||| ||||| |||||||| || |||| ||||||||| || || || |
Sbjct: 366 agcctaaacctgaaccgaaacctgagcctaaacctgagcctaaacctgaacctaaacctg 425
Query: 554 agcctaaacc 563
||||||||||
Sbjct: 426 agcctaaacc 435
Score = 60.0 bits (30), Expect = 3e-007
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 1058 agccagagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
|||| |||||||||||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 336 agcctgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcc 393
Score = 60.0 bits (30), Expect = 3e-007
Identities = 87/106 (82%)
Strand = Plus / Plus
Query: 596 aaccaaaaccagagcctaagccagagcctaaacccgaaccgaaaccggagccaaagccag 655
|||| ||||| |||||||| || ||||||||||| || || || || ||||| || || |
Sbjct: 276 aacctaaacctgagcctaaacctgagcctaaacctgagcctaagcctgagcctaaacctg 335
Query: 656 agccccaacctaagccagagcctaagcctgagccgaaaccagaacc 701
|||| | |||||||| |||||||| |||||||| ||||| |||||
Sbjct: 336 agcctgagcctaagcctgagcctaaacctgagcctaaacctgaacc 381
Score = 60.0 bits (30), Expect = 3e-007
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 506 aaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagcctaaacc 563
|||| ||||| |||||||| || |||| |||||||||||| ||||| |||||||||||
Sbjct: 276 aacctaaacctgagcctaaacctgagcctaaacctgagcctaagcctgagcctaaacc 333
Score = 56.0 bits (28), Expect = 4e-006
Identities = 121/152 (79%)
Strand = Plus / Plus
Query: 664 cctaagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaag 723
||||| || |||||||| |||||||| || || || || || || ||||| | || |||
Sbjct: 290 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcctgagcctaag 349
Query: 724 cctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaa 783
|||||||||||||| || || ||||| || || || || |||||||| || || || |||
Sbjct: 350 cctgagcctaaacctgagcctaaacctgaaccgaaacctgagcctaaacctgagcctaaa 409
Query: 784 ccagagccaaagcctgagcctaaacccgaacc 815
|| || || || |||||||||||||| |||||
Sbjct: 410 cctgaacctaaacctgagcctaaacctgaacc 441
Score = 56.0 bits (28), Expect = 4e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagcc 545
|||| |||||||| || ||||| ||||||||||| |||| ||||||||||||
Sbjct: 288 agcctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcc 339
Score = 56.0 bits (28), Expect = 4e-006
Identities = 118/148 (79%)
Strand = Plus / Plus
Query: 662 aacctaagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaa 721
||||||| || |||||||| |||||||| ||||| || || ||||| ||||| ||||
Sbjct: 276 aacctaaacctgagcctaaacctgagcctaaacctgagcctaagcctgagcctaaacctg 335
Query: 722 agcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaa 781
||||||||||||| || || || ||||| ||||| || || || || || || || || |
Sbjct: 336 agcctgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagccta 395
Query: 782 aaccagagccaaagcctgagcctaaacc 809
|||| ||||| || ||||| ||||||||
Sbjct: 396 aacctgagcctaaacctgaacctaaacc 423
Score = 52.0 bits (26), Expect = 7e-005
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 534 taaacctgagccaaagccagagcctaaacccaaaccgaaaccagagccaaagccagagcc 593
|||||||||||| || || ||||||||||| | || || || ||||| || || |||||
Sbjct: 280 taaacctgagcctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcc 339
Query: 594 acaaccaaaaccagagcctaagccagagcctaaacccgaaccgaaaccggagcc 647
| || || || |||||||| || ||||||||||| ||||||||||| |||||
Sbjct: 340 tgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcc 393
Score = 48.1 bits (24), Expect = 0.001
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 596 aaccaaaaccagagcctaagccagagcctaaacccgaaccgaaaccggagcc 647
|||| ||||| |||||||| || ||||||||||| ||||| ||||| |||||
Sbjct: 378 aaccgaaacctgagcctaaacctgagcctaaacctgaacctaaacctgagcc 429
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaacc 1109
|||||||| ||||| || ||||| ||||||||||| ||||| |||||
Sbjct: 401 gagcctaaacctgaacctaaacctgagcctaaacctgaacctaaacc 447
Score = 44.1 bits (22), Expect = 0.016
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 524 agccagagcataaacctgagccaaagccagagcctaaacccaaaccgaaaccagagcc 581
|||| |||| ||| |||||||| || || ||||||||||| |||||||||| |||||
Sbjct: 336 agcctgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcc 393
Score = 42.1 bits (21), Expect = 0.064
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctga 542
|||| ||||||||||| ||||| |||||||| || || | |||||||||
Sbjct: 402 agcctaaacctgaacctaaacctgagcctaaacctgaacctaaacctga 450
Score = 42.1 bits (21), Expect = 0.064
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 499 aaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagcct 558
|||||||| || ||||| |||||||| || || | |||||||||||| || || || |||
Sbjct: 383 aaacctgagcctaaacctgagcctaaacctgaacctaaacctgagcctaaacctgaacct 442
Query: 559 aaacc 563
|||||
Sbjct: 443 aaacc 447
Score = 42.1 bits (21), Expect = 0.064
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 931 gagcctaagcccgaaccaaaaccaaagccaaagcctgagcctaaacccgaacc 983
|||||||| || ||||| ||||| |||| || |||||||||||||| |||||
Sbjct: 365 gagcctaaacctgaaccgaaacctgagcctaaacctgagcctaaacctgaacc 417
Score = 42.1 bits (21), Expect = 0.064
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 517 gagcctaagccagagcataaacctgagcc 545
||||||||||| |||| ||||||||||||
Sbjct: 341 gagcctaagcctgagcctaaacctgagcc 369
Score = 40.1 bits (20), Expect = 0.25
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacctgaaccaaaacc 1031
|||| ||||| || || ||||||||||||||||| |||||
Sbjct: 408 aacctgaacctaaacctgagcctaaacctgaacctaaacc 447
Score = 40.1 bits (20), Expect = 0.25
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 1072 cctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 386 cctgagcctaaacctgagcctaaacctgaacctaaacctgagcc 429
Score = 40.1 bits (20), Expect = 0.25
Identities = 65/80 (81%)
Strand = Plus / Plus
Query: 502 cctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagcctaaa 561
||||| || ||||| |||||||| || || | ||||||||||| || || |||||||||
Sbjct: 350 cctgagcctaaacctgagcctaaacctgaaccgaaacctgagcctaaacctgagcctaaa 409
Query: 562 cccaaaccgaaaccagagcc 581
|| |||| ||||| |||||
Sbjct: 410 cctgaacctaaacctgagcc 429
>gb|CX651152.1|CX651152 COLD1_50_B04.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_50_B04_A029 5', mRNA sequence
Length = 675
Score = 75.8 bits (38), Expect = 5e-012
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 664 cctaagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaag 723
||||| || ||||||||||||||||| ||||| || || |||| |||| | || ||
Sbjct: 89 cctaaacctgagcctaagcctgagcctaaacctgagcctgagcctaagcctgagcctaaa 148
Query: 724 cctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaa 783
|||||||||||||| ||||| ||||| ||||| || || |||||||| || ||||| |||
Sbjct: 149 cctgagcctaaacctgaaccgaaacctgagcctaaacctgagcctaaacctgaacctaaa 208
Query: 784 ccagagccaaagcctgagcctaaacc 809
|| ||||| || ||||| ||||||||
Sbjct: 209 cctgagcctaaacctgaacctaaacc 234
Score = 60.0 bits (30), Expect = 3e-007
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccag 553
|||| ||||||||||| ||||| |||||||| || |||| ||||||||| || || || |
Sbjct: 153 agcctaaacctgaaccgaaacctgagcctaaacctgagcctaaacctgaacctaaacctg 212
Query: 554 agcctaaacc 563
||||||||||
Sbjct: 213 agcctaaacc 222
Score = 60.0 bits (30), Expect = 3e-007
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 1058 agccagagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
|||| |||||||||||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 123 agcctgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcc 180
Score = 60.0 bits (30), Expect = 3e-007
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 622 cctaaacccgaaccgaaaccggagccaaagccagagccccaacctaagccagagcctaag 681
|||||||| || || ||||| ||||| ||||| ||||| ||||| |||| |||||||||
Sbjct: 77 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcctgagcctaag 136
Query: 682 cctgagccgaaacc 695
|||||||| |||||
Sbjct: 137 cctgagcctaaacc 150
Score = 60.0 bits (30), Expect = 3e-007
Identities = 123/154 (79%)
Strand = Plus / Plus
Query: 662 aacctaagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaa 721
||||||| || |||||||| |||||||| || || || || || || ||||| | || |
Sbjct: 75 aacctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcctgagccta 134
Query: 722 agcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaa 781
|||||||||||||||| || || ||||| || || || || |||||||| || || || |
Sbjct: 135 agcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcctaaacctgagccta 194
Query: 782 aaccagagccaaagcctgagcctaaacccgaacc 815
|||| || || || |||||||||||||| |||||
Sbjct: 195 aacctgaacctaaacctgagcctaaacctgaacc 228
Score = 56.0 bits (28), Expect = 4e-006
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 490 ccaaagccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagcc 545
||||| || |||||||| || ||||| ||||||||||| |||| ||||||||||||
Sbjct: 71 ccaaaacctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcc 126
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 607 gagcctaagccagagcctaaacccgaaccgaaaccggagcc 647
|||||||| || ||||||||||| ||||||||||| |||||
Sbjct: 140 gagcctaaacctgagcctaaacctgaaccgaaacctgagcc 180
Score = 48.1 bits (24), Expect = 0.001
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 596 aaccaaaaccagagcctaagccagagcctaaacccgaaccgaaaccggagcc 647
|||| ||||| |||||||| || ||||||||||| ||||| ||||| |||||
Sbjct: 165 aaccgaaacctgagcctaaacctgagcctaaacctgaacctaaacctgagcc 216
Score = 48.1 bits (24), Expect = 0.001
Identities = 75/92 (81%)
Strand = Plus / Plus
Query: 610 cctaagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaag 669
||||| || ||||||||||| || || || || ||||| || || ||||| | ||||||
Sbjct: 77 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcctgagcctaag 136
Query: 670 ccagagcctaagcctgagccgaaaccagaacc 701
|| |||||||| |||||||| ||||| |||||
Sbjct: 137 cctgagcctaaacctgagcctaaacctgaacc 168
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 520 cctaagccagagcataaacctgagccaaagccagagcctaaacc 563
||||| || |||| |||||||||||| ||||| |||||||||||
Sbjct: 77 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacc 120
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaacc 1109
|||||||| ||||| || ||||| ||||||||||| ||||| |||||
Sbjct: 188 gagcctaaacctgaacctaaacctgagcctaaacctgaacctaaacc 234
Score = 44.1 bits (22), Expect = 0.016
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 524 agccagagcataaacctgagccaaagccagagcctaaacccaaaccgaaaccagagcc 581
|||| |||| ||| |||||||| || || ||||||||||| |||||||||| |||||
Sbjct: 123 agcctgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcc 180
Score = 42.1 bits (21), Expect = 0.064
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctga 542
|||| ||||||||||| ||||| |||||||| || || | |||||||||
Sbjct: 189 agcctaaacctgaacctaaacctgagcctaaacctgaacctaaacctga 237
Score = 42.1 bits (21), Expect = 0.064
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 499 aaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagcct 558
|||||||| || ||||| |||||||| || || | |||||||||||| || || || |||
Sbjct: 170 aaacctgagcctaaacctgagcctaaacctgaacctaaacctgagcctaaacctgaacct 229
Query: 559 aaacc 563
|||||
Sbjct: 230 aaacc 234
Score = 42.1 bits (21), Expect = 0.064
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 931 gagcctaagcccgaaccaaaaccaaagccaaagcctgagcctaaacccgaacc 983
|||||||| || ||||| ||||| |||| || |||||||||||||| |||||
Sbjct: 152 gagcctaaacctgaaccgaaacctgagcctaaacctgagcctaaacctgaacc 204
Score = 42.1 bits (21), Expect = 0.064
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 517 gagcctaagccagagcataaacctgagcc 545
||||||||||| |||| ||||||||||||
Sbjct: 128 gagcctaagcctgagcctaaacctgagcc 156
Score = 42.1 bits (21), Expect = 0.064
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 601 aaaccagagcctaagccagagcctaaacc 629
||||| ||||||||||| |||||||||||
Sbjct: 92 aaacctgagcctaagcctgagcctaaacc 120
Score = 40.1 bits (20), Expect = 0.25
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacctgaaccaaaacc 1031
|||| ||||| || || ||||||||||||||||| |||||
Sbjct: 195 aacctgaacctaaacctgagcctaaacctgaacctaaacc 234
Score = 40.1 bits (20), Expect = 0.25
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 1072 cctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 173 cctgagcctaaacctgagcctaaacctgaacctaaacctgagcc 216
Score = 40.1 bits (20), Expect = 0.25
Identities = 65/80 (81%)
Strand = Plus / Plus
Query: 502 cctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagcctaaa 561
||||| || ||||| |||||||| || || | ||||||||||| || || |||||||||
Sbjct: 137 cctgagcctaaacctgagcctaaacctgaaccgaaacctgagcctaaacctgagcctaaa 196
Query: 562 cccaaaccgaaaccagagcc 581
|| |||| ||||| |||||
Sbjct: 197 cctgaacctaaacctgagcc 216
>gb|DR070353.1|DR070353 RTDK1_12_F11.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_12_F11_A029 5', mRNA sequence
Length = 784
Score = 75.8 bits (38), Expect = 5e-012
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 664 cctaagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaag 723
||||| || ||||||||||||||||| ||||| || || |||| |||| | || ||
Sbjct: 307 cctaaacctgagcctaagcctgagcctaaacctgagcctgagcctaagcctgagcctaaa 366
Query: 724 cctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaa 783
|||||||||||||| ||||| ||||| ||||| || || |||||||| || ||||| |||
Sbjct: 367 cctgagcctaaacctgaaccgaaacctgagcctaaacctgagcctaaacctgaacctaaa 426
Query: 784 ccagagccaaagcctgagcctaaacc 809
|| ||||| || ||||| ||||||||
Sbjct: 427 cctgagcctaaacctgaacctaaacc 452
Score = 60.0 bits (30), Expect = 3e-007
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccag 553
|||| ||||||||||| ||||| |||||||| || |||| ||||||||| || || || |
Sbjct: 371 agcctaaacctgaaccgaaacctgagcctaaacctgagcctaaacctgaacctaaacctg 430
Query: 554 agcctaaacc 563
||||||||||
Sbjct: 431 agcctaaacc 440
Score = 60.0 bits (30), Expect = 3e-007
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 1058 agccagagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
|||| |||||||||||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 341 agcctgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcc 398
Score = 60.0 bits (30), Expect = 3e-007
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 622 cctaaacccgaaccgaaaccggagccaaagccagagccccaacctaagccagagcctaag 681
|||||||| || || ||||| ||||| ||||| ||||| ||||| |||| |||||||||
Sbjct: 295 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcctgagcctaag 354
Query: 682 cctgagccgaaacc 695
|||||||| |||||
Sbjct: 355 cctgagcctaaacc 368
Score = 60.0 bits (30), Expect = 3e-007
Identities = 123/154 (79%)
Strand = Plus / Plus
Query: 662 aacctaagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaa 721
||||||| || |||||||| |||||||| || || || || || || ||||| | || |
Sbjct: 293 aacctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcctgagccta 352
Query: 722 agcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaa 781
|||||||||||||||| || || ||||| || || || || |||||||| || || || |
Sbjct: 353 agcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcctaaacctgagccta 412
Query: 782 aaccagagccaaagcctgagcctaaacccgaacc 815
|||| || || || |||||||||||||| |||||
Sbjct: 413 aacctgaacctaaacctgagcctaaacctgaacc 446
Score = 56.0 bits (28), Expect = 4e-006
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 490 ccaaagccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagcc 545
||||| || |||||||| || ||||| ||||||||||| |||| ||||||||||||
Sbjct: 289 ccaaaacctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcc 344
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 607 gagcctaagccagagcctaaacccgaaccgaaaccggagcc 647
|||||||| || ||||||||||| ||||||||||| |||||
Sbjct: 358 gagcctaaacctgagcctaaacctgaaccgaaacctgagcc 398
Score = 48.1 bits (24), Expect = 0.001
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 596 aaccaaaaccagagcctaagccagagcctaaacccgaaccgaaaccggagcc 647
|||| ||||| |||||||| || ||||||||||| ||||| ||||| |||||
Sbjct: 383 aaccgaaacctgagcctaaacctgagcctaaacctgaacctaaacctgagcc 434
Score = 48.1 bits (24), Expect = 0.001
Identities = 75/92 (81%)
Strand = Plus / Plus
Query: 610 cctaagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaag 669
||||| || ||||||||||| || || || || ||||| || || ||||| | ||||||
Sbjct: 295 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcctgagcctaag 354
Query: 670 ccagagcctaagcctgagccgaaaccagaacc 701
|| |||||||| |||||||| ||||| |||||
Sbjct: 355 cctgagcctaaacctgagcctaaacctgaacc 386
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 520 cctaagccagagcataaacctgagccaaagccagagcctaaacc 563
||||| || |||| |||||||||||| ||||| |||||||||||
Sbjct: 295 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacc 338
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaacc 1109
|||||||| ||||| || ||||| ||||||||||| ||||| |||||
Sbjct: 406 gagcctaaacctgaacctaaacctgagcctaaacctgaacctaaacc 452
Score = 44.1 bits (22), Expect = 0.016
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 524 agccagagcataaacctgagccaaagccagagcctaaacccaaaccgaaaccagagcc 581
|||| |||| ||| |||||||| || || ||||||||||| |||||||||| |||||
Sbjct: 341 agcctgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcc 398
Score = 42.1 bits (21), Expect = 0.064
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctga 542
|||| ||||||||||| ||||| |||||||| || || | |||||||||
Sbjct: 407 agcctaaacctgaacctaaacctgagcctaaacctgaacctaaacctga 455
Score = 42.1 bits (21), Expect = 0.064
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 499 aaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagcct 558
|||||||| || ||||| |||||||| || || | |||||||||||| || || || |||
Sbjct: 388 aaacctgagcctaaacctgagcctaaacctgaacctaaacctgagcctaaacctgaacct 447
Query: 559 aaacc 563
|||||
Sbjct: 448 aaacc 452
Score = 42.1 bits (21), Expect = 0.064
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 931 gagcctaagcccgaaccaaaaccaaagccaaagcctgagcctaaacccgaacc 983
|||||||| || ||||| ||||| |||| || |||||||||||||| |||||
Sbjct: 370 gagcctaaacctgaaccgaaacctgagcctaaacctgagcctaaacctgaacc 422
Score = 42.1 bits (21), Expect = 0.064
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 517 gagcctaagccagagcataaacctgagcc 545
||||||||||| |||| ||||||||||||
Sbjct: 346 gagcctaagcctgagcctaaacctgagcc 374
Score = 42.1 bits (21), Expect = 0.064
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 601 aaaccagagcctaagccagagcctaaacc 629
||||| ||||||||||| |||||||||||
Sbjct: 310 aaacctgagcctaagcctgagcctaaacc 338
Score = 40.1 bits (20), Expect = 0.25
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacctgaaccaaaacc 1031
|||| ||||| || || ||||||||||||||||| |||||
Sbjct: 413 aacctgaacctaaacctgagcctaaacctgaacctaaacc 452
Score = 40.1 bits (20), Expect = 0.25
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 1072 cctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 391 cctgagcctaaacctgagcctaaacctgaacctaaacctgagcc 434
Score = 40.1 bits (20), Expect = 0.25
Identities = 65/80 (81%)
Strand = Plus / Plus
Query: 502 cctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagcctaaa 561
||||| || ||||| |||||||| || || | ||||||||||| || || |||||||||
Sbjct: 355 cctgagcctaaacctgagcctaaacctgaaccgaaacctgagcctaaacctgagcctaaa 414
Query: 562 cccaaaccgaaaccagagcc 581
|| |||| ||||| |||||
Sbjct: 415 cctgaacctaaacctgagcc 434
>gb|DR081109.1|DR081109 RTFEPL1_27_A11.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_27_A11_A029 5', mRNA sequence
Length = 801
Score = 75.8 bits (38), Expect = 5e-012
Identities = 119/146 (81%)
Strand = Plus / Plus
Query: 664 cctaagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaag 723
||||| || ||||||||||||||||| ||||| || || |||| |||| | || ||
Sbjct: 341 cctaaacctgagcctaagcctgagcctaaacctgagcctgagcctaagcctgagcctaaa 400
Query: 724 cctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaa 783
|||||||||||||| ||||| ||||| ||||| || || |||||||| || ||||| |||
Sbjct: 401 cctgagcctaaacctgaaccgaaacctgagcctaaacctgagcctaaacctgaacctaaa 460
Query: 784 ccagagccaaagcctgagcctaaacc 809
|| ||||| || ||||| ||||||||
Sbjct: 461 cctgagcctaaacctgaacctaaacc 486
Score = 60.0 bits (30), Expect = 3e-007
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccag 553
|||| ||||||||||| ||||| |||||||| || |||| ||||||||| || || || |
Sbjct: 405 agcctaaacctgaaccgaaacctgagcctaaacctgagcctaaacctgaacctaaacctg 464
Query: 554 agcctaaacc 563
||||||||||
Sbjct: 465 agcctaaacc 474
Score = 60.0 bits (30), Expect = 3e-007
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 1058 agccagagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
|||| |||||||||||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 375 agcctgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcc 432
Score = 60.0 bits (30), Expect = 3e-007
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 622 cctaaacccgaaccgaaaccggagccaaagccagagccccaacctaagccagagcctaag 681
|||||||| || || ||||| ||||| ||||| ||||| ||||| |||| |||||||||
Sbjct: 329 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcctgagcctaag 388
Query: 682 cctgagccgaaacc 695
|||||||| |||||
Sbjct: 389 cctgagcctaaacc 402
Score = 60.0 bits (30), Expect = 3e-007
Identities = 123/154 (79%)
Strand = Plus / Plus
Query: 662 aacctaagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaa 721
||||||| || |||||||| |||||||| || || || || || || ||||| | || |
Sbjct: 327 aacctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcctgagccta 386
Query: 722 agcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaa 781
|||||||||||||||| || || ||||| || || || || |||||||| || || || |
Sbjct: 387 agcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcctaaacctgagccta 446
Query: 782 aaccagagccaaagcctgagcctaaacccgaacc 815
|||| || || || |||||||||||||| |||||
Sbjct: 447 aacctgaacctaaacctgagcctaaacctgaacc 480
Score = 56.0 bits (28), Expect = 4e-006
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 490 ccaaagccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagcc 545
||||| || |||||||| || ||||| ||||||||||| |||| ||||||||||||
Sbjct: 323 ccaaaacctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcc 378
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 607 gagcctaagccagagcctaaacccgaaccgaaaccggagcc 647
|||||||| || ||||||||||| ||||||||||| |||||
Sbjct: 392 gagcctaaacctgagcctaaacctgaaccgaaacctgagcc 432
Score = 48.1 bits (24), Expect = 0.001
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 596 aaccaaaaccagagcctaagccagagcctaaacccgaaccgaaaccggagcc 647
|||| ||||| |||||||| || ||||||||||| ||||| ||||| |||||
Sbjct: 417 aaccgaaacctgagcctaaacctgagcctaaacctgaacctaaacctgagcc 468
Score = 48.1 bits (24), Expect = 0.001
Identities = 75/92 (81%)
Strand = Plus / Plus
Query: 610 cctaagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaag 669
||||| || ||||||||||| || || || || ||||| || || ||||| | ||||||
Sbjct: 329 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcctgagcctaag 388
Query: 670 ccagagcctaagcctgagccgaaaccagaacc 701
|| |||||||| |||||||| ||||| |||||
Sbjct: 389 cctgagcctaaacctgagcctaaacctgaacc 420
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 520 cctaagccagagcataaacctgagccaaagccagagcctaaacc 563
||||| || |||| |||||||||||| ||||| |||||||||||
Sbjct: 329 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacc 372
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaacc 1109
|||||||| ||||| || ||||| ||||||||||| ||||| |||||
Sbjct: 440 gagcctaaacctgaacctaaacctgagcctaaacctgaacctaaacc 486
Score = 44.1 bits (22), Expect = 0.016
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 524 agccagagcataaacctgagccaaagccagagcctaaacccaaaccgaaaccagagcc 581
|||| |||| ||| |||||||| || || ||||||||||| |||||||||| |||||
Sbjct: 375 agcctgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcc 432
Score = 42.1 bits (21), Expect = 0.064
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctga 542
|||| ||||||||||| ||||| |||||||| || || | |||||||||
Sbjct: 441 agcctaaacctgaacctaaacctgagcctaaacctgaacctaaacctga 489
Score = 42.1 bits (21), Expect = 0.064
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 499 aaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagcct 558
|||||||| || ||||| |||||||| || || | |||||||||||| || || || |||
Sbjct: 422 aaacctgagcctaaacctgagcctaaacctgaacctaaacctgagcctaaacctgaacct 481
Query: 559 aaacc 563
|||||
Sbjct: 482 aaacc 486
Score = 42.1 bits (21), Expect = 0.064
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 931 gagcctaagcccgaaccaaaaccaaagccaaagcctgagcctaaacccgaacc 983
|||||||| || ||||| ||||| |||| || |||||||||||||| |||||
Sbjct: 404 gagcctaaacctgaaccgaaacctgagcctaaacctgagcctaaacctgaacc 456
Score = 42.1 bits (21), Expect = 0.064
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 517 gagcctaagccagagcataaacctgagcc 545
||||||||||| |||| ||||||||||||
Sbjct: 380 gagcctaagcctgagcctaaacctgagcc 408
Score = 42.1 bits (21), Expect = 0.064
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 601 aaaccagagcctaagccagagcctaaacc 629
||||| ||||||||||| |||||||||||
Sbjct: 344 aaacctgagcctaagcctgagcctaaacc 372
Score = 40.1 bits (20), Expect = 0.25
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacctgaaccaaaacc 1031
|||| ||||| || || ||||||||||||||||| |||||
Sbjct: 447 aacctgaacctaaacctgagcctaaacctgaacctaaacc 486
Score = 40.1 bits (20), Expect = 0.25
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 1072 cctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 425 cctgagcctaaacctgagcctaaacctgaacctaaacctgagcc 468
Score = 40.1 bits (20), Expect = 0.25
Identities = 65/80 (81%)
Strand = Plus / Plus
Query: 502 cctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagcctaaa 561
||||| || ||||| |||||||| || || | ||||||||||| || || |||||||||
Sbjct: 389 cctgagcctaaacctgagcctaaacctgaaccgaaacctgagcctaaacctgagcctaaa 448
Query: 562 cccaaaccgaaaccagagcc 581
|| |||| ||||| |||||
Sbjct: 449 cctgaacctaaacctgagcc 468
>gb|CO173325.1|CO173325 NDL1_35_B03.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_35_B03_A029 5', mRNA sequence
Length = 745
Score = 71.9 bits (36), Expect = 7e-011
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 610 cctaagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaag 669
||||| || ||||||||||| || || ||||| ||||| ||||| ||||| ||||| ||
Sbjct: 296 cctaaacctgagcctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgag 355
Query: 670 ccagagcctaagcctgagccgaaaccagaacc 701
|| ||||||||||||||||| ||||| |||||
Sbjct: 356 cctgagcctaagcctgagcctaaacctgaacc 387
Score = 67.9 bits (34), Expect = 1e-009
Identities = 118/146 (80%)
Strand = Plus / Plus
Query: 664 cctaagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaag 723
||||| || |||||||| |||||||| || || || || || || ||||| | || |||
Sbjct: 308 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcctgagcctaag 367
Query: 724 cctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaa 783
|||||||||||||| ||||| ||||| || || || || |||||||| || ||||| |||
Sbjct: 368 cctgagcctaaacctgaacctaaacctgaaccgaaacctgagcctaaacctgaacctaaa 427
Query: 784 ccagagccaaagcctgagcctaaacc 809
|| ||||| || ||||| ||||||||
Sbjct: 428 cctgagcctaaacctgaacctaaacc 453
Score = 60.0 bits (30), Expect = 3e-007
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 506 aaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagcctaaacc 563
|||| ||||| |||||||| || |||| |||||||||||| ||||| |||||||||||
Sbjct: 294 aacctaaacctgagcctaaacctgagcctaaacctgagcctaagcctgagcctaaacc 351
Score = 56.0 bits (28), Expect = 4e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagcc 545
|||| |||||||| || ||||| ||||||||||| |||| ||||||||||||
Sbjct: 306 agcctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcc 357
Score = 52.0 bits (26), Expect = 7e-005
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 1058 agccagagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
|||| |||||||||||||| || ||||| || |||||||| ||||| ||||| |||||
Sbjct: 354 agcctgagcctaagcctgagcctaaacctgaacctaaacctgaaccgaaacctgagcc 411
Score = 52.0 bits (26), Expect = 7e-005
Identities = 122/154 (79%)
Strand = Plus / Plus
Query: 662 aacctaagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaa 721
||||||| || |||||||| |||||||| ||||| || || ||||| ||||| ||||
Sbjct: 294 aacctaaacctgagcctaaacctgagcctaaacctgagcctaagcctgagcctaaacctg 353
Query: 722 agcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaa 781
||||||||||||| || || || ||||| || || || || || || || || || || |
Sbjct: 354 agcctgagcctaagcctgagcctaaacctgaacctaaacctgaaccgaaacctgagccta 413
Query: 782 aaccagagccaaagcctgagcctaaacccgaacc 815
|||| || || || |||||||||||||| |||||
Sbjct: 414 aacctgaacctaaacctgagcctaaacctgaacc 447
Score = 52.0 bits (26), Expect = 7e-005
Identities = 86/106 (81%)
Strand = Plus / Plus
Query: 596 aaccaaaaccagagcctaagccagagcctaaacccgaaccgaaaccggagccaaagccag 655
|||| ||||| |||||||| || ||||||||||| || || || || ||||| || || |
Sbjct: 294 aacctaaacctgagcctaaacctgagcctaaacctgagcctaagcctgagcctaaacctg 353
Query: 656 agccccaacctaagccagagcctaagcctgagccgaaaccagaacc 701
|||| | |||||||| |||||||| ||||| || ||||| |||||
Sbjct: 354 agcctgagcctaagcctgagcctaaacctgaacctaaacctgaacc 399
Score = 50.1 bits (25), Expect = 3e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 499 aaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagcct 558
||||||||||| ||||| |||||||| || || | |||||||||||| || || || |||
Sbjct: 389 aaacctgaaccgaaacctgagcctaaacctgaacctaaacctgagcctaaacctgaacct 448
Query: 559 aaacc 563
|||||
Sbjct: 449 aaacc 453
Score = 50.1 bits (25), Expect = 3e-004
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 553 gagcctaaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcct 612
||||||||||| | || ||||| ||||| ||||| ||||| |||| | || ||||||
Sbjct: 305 gagcctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcctgagcct 364
Query: 613 aagccagagcctaaacccgaaccgaaacc 641
||||| ||||||||||| ||||| |||||
Sbjct: 365 aagcctgagcctaaacctgaacctaaacc 393
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaacc 1109
|||||||| ||||| || ||||| ||||||||||| ||||| |||||
Sbjct: 407 gagcctaaacctgaacctaaacctgagcctaaacctgaacctaaacc 453
Score = 44.1 bits (22), Expect = 0.016
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 1066 cctaagcctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 386 cctaaacctgaaccgaaacctgagcctaaacctgaacctaaacctgagcc 435
Score = 44.1 bits (22), Expect = 0.016
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccag 553
|||| ||||||||||| ||||| || || || || |||| ||||||||| || || || |
Sbjct: 372 agcctaaacctgaacctaaacctgaaccgaaacctgagcctaaacctgaacctaaacctg 431
Query: 554 agcctaaacc 563
||||||||||
Sbjct: 432 agcctaaacc 441
Score = 44.1 bits (22), Expect = 0.016
Identities = 91/114 (79%)
Strand = Plus / Plus
Query: 534 taaacctgagccaaagccagagcctaaacccaaaccgaaaccagagccaaagccagagcc 593
|||||||||||| || || ||||||||||| | || || || ||||| || || |||||
Sbjct: 298 taaacctgagcctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcc 357
Query: 594 acaaccaaaaccagagcctaagccagagcctaaacccgaaccgaaaccggagcc 647
| || || || |||||||| || || |||||||| ||||||||||| |||||
Sbjct: 358 tgagcctaagcctgagcctaaacctgaacctaaacctgaaccgaaacctgagcc 411
Score = 42.1 bits (21), Expect = 0.064
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctga 542
|||| ||||||||||| ||||| |||||||| || || | |||||||||
Sbjct: 408 agcctaaacctgaacctaaacctgagcctaaacctgaacctaaacctga 456
Score = 42.1 bits (21), Expect = 0.064
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1003 aagccagagcctaaacctgaaccaaaacc 1031
||||| ||||||||||||||||| |||||
Sbjct: 365 aagcctgagcctaaacctgaacctaaacc 393
Score = 42.1 bits (21), Expect = 0.064
Identities = 62/76 (81%), Gaps = 6/76 (7%)
Strand = Plus / Plus
Query: 956 agccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagccta 1015
|||| ||||||||||||||||| ||||| | |||| ||||| || || |||||||
Sbjct: 360 agcctaagcctgagcctaaacctgaaccta------aacctgaaccgaaacctgagccta 413
Query: 1016 aacctgaaccaaaacc 1031
|||||||||| |||||
Sbjct: 414 aacctgaacctaaacc 429
Score = 42.1 bits (21), Expect = 0.064
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 919 gagccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcctgagcctaaaccc 978
||||| ||||| |||||||| || ||||| ||||| | || || ||||||||||||||
Sbjct: 359 gagcctaagcctgagcctaaacctgaacctaaacctgaaccgaaacctgagcctaaacct 418
Query: 979 gaacc 983
|||||
Sbjct: 419 gaacc 423
Score = 40.1 bits (20), Expect = 0.25
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacctgaaccaaaacc 1031
|||| ||||| || || ||||||||||||||||| |||||
Sbjct: 414 aacctgaacctaaacctgagcctaaacctgaacctaaacc 453
Score = 40.1 bits (20), Expect = 0.25
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 436 cctgaacctaagcccgaacctaagccagagcctaagcccgaacctaaa 483
||||||||||| || ||||| || || |||||||| || |||||||||
Sbjct: 380 cctgaacctaaacctgaaccgaaacctgagcctaaacctgaacctaaa 427
>gb|DR117988.1|DR117988 RTMG1_10_A11.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_10_A11_A029 5', mRNA sequence
Length = 758
Score = 71.9 bits (36), Expect = 7e-011
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 610 cctaagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaag 669
||||| || ||||||||||| || || ||||| ||||| ||||| ||||| ||||| ||
Sbjct: 77 cctaaacctgagcctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgag 136
Query: 670 ccagagcctaagcctgagccgaaaccagaacc 701
|| ||||||||||||||||| ||||| |||||
Sbjct: 137 cctgagcctaagcctgagcctaaacctgaacc 168
Score = 67.9 bits (34), Expect = 1e-009
Identities = 118/146 (80%)
Strand = Plus / Plus
Query: 664 cctaagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaag 723
||||| || |||||||| |||||||| || || || || || || ||||| | || |||
Sbjct: 89 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcctgagcctaag 148
Query: 724 cctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaa 783
|||||||||||||| ||||| ||||| || || || || |||||||| || ||||| |||
Sbjct: 149 cctgagcctaaacctgaacctaaacctgaaccgaaacctgagcctaaacctgaacctaaa 208
Query: 784 ccagagccaaagcctgagcctaaacc 809
|| ||||| || ||||| ||||||||
Sbjct: 209 cctgagcctaaacctgaacctaaacc 234
Score = 60.0 bits (30), Expect = 3e-007
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 506 aaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagcctaaacc 563
|||| ||||| |||||||| || |||| |||||||||||| ||||| |||||||||||
Sbjct: 75 aacctaaacctgagcctaaacctgagcctaaacctgagcctaagcctgagcctaaacc 132
Score = 56.0 bits (28), Expect = 4e-006
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagcc 545
|||| |||||||| || ||||| ||||||||||| |||| ||||||||||||
Sbjct: 87 agcctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcc 138
Score = 52.0 bits (26), Expect = 7e-005
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 1058 agccagagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
|||| |||||||||||||| || ||||| || |||||||| ||||| ||||| |||||
Sbjct: 135 agcctgagcctaagcctgagcctaaacctgaacctaaacctgaaccgaaacctgagcc 192
Score = 52.0 bits (26), Expect = 7e-005
Identities = 122/154 (79%)
Strand = Plus / Plus
Query: 662 aacctaagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaa 721
||||||| || |||||||| |||||||| ||||| || || ||||| ||||| ||||
Sbjct: 75 aacctaaacctgagcctaaacctgagcctaaacctgagcctaagcctgagcctaaacctg 134
Query: 722 agcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaa 781
||||||||||||| || || || ||||| || || || || || || || || || || |
Sbjct: 135 agcctgagcctaagcctgagcctaaacctgaacctaaacctgaaccgaaacctgagccta 194
Query: 782 aaccagagccaaagcctgagcctaaacccgaacc 815
|||| || || || |||||||||||||| |||||
Sbjct: 195 aacctgaacctaaacctgagcctaaacctgaacc 228
Score = 52.0 bits (26), Expect = 7e-005
Identities = 86/106 (81%)
Strand = Plus / Plus
Query: 596 aaccaaaaccagagcctaagccagagcctaaacccgaaccgaaaccggagccaaagccag 655
|||| ||||| |||||||| || ||||||||||| || || || || ||||| || || |
Sbjct: 75 aacctaaacctgagcctaaacctgagcctaaacctgagcctaagcctgagcctaaacctg 134
Query: 656 agccccaacctaagccagagcctaagcctgagccgaaaccagaacc 701
|||| | |||||||| |||||||| ||||| || ||||| |||||
Sbjct: 135 agcctgagcctaagcctgagcctaaacctgaacctaaacctgaacc 180
Score = 50.1 bits (25), Expect = 3e-004
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 499 aaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagcct 558
||||||||||| ||||| |||||||| || || | |||||||||||| || || || |||
Sbjct: 170 aaacctgaaccgaaacctgagcctaaacctgaacctaaacctgagcctaaacctgaacct 229
Query: 559 aaacc 563
|||||
Sbjct: 230 aaacc 234
Score = 50.1 bits (25), Expect = 3e-004
Identities = 73/89 (82%)
Strand = Plus / Plus
Query: 553 gagcctaaacccaaaccgaaaccagagccaaagccagagccacaaccaaaaccagagcct 612
||||||||||| | || ||||| ||||| ||||| ||||| |||| | || ||||||
Sbjct: 86 gagcctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcctgagcct 145
Query: 613 aagccagagcctaaacccgaaccgaaacc 641
||||| ||||||||||| ||||| |||||
Sbjct: 146 aagcctgagcctaaacctgaacctaaacc 174
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaacc 1109
|||||||| ||||| || ||||| ||||||||||| ||||| |||||
Sbjct: 188 gagcctaaacctgaacctaaacctgagcctaaacctgaacctaaacc 234
Score = 44.1 bits (22), Expect = 0.016
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 1066 cctaagcctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 167 cctaaacctgaaccgaaacctgagcctaaacctgaacctaaacctgagcc 216
Score = 44.1 bits (22), Expect = 0.016
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccag 553
|||| ||||||||||| ||||| || || || || |||| ||||||||| || || || |
Sbjct: 153 agcctaaacctgaacctaaacctgaaccgaaacctgagcctaaacctgaacctaaacctg 212
Query: 554 agcctaaacc 563
||||||||||
Sbjct: 213 agcctaaacc 222
Score = 44.1 bits (22), Expect = 0.016
Identities = 91/114 (79%)
Strand = Plus / Plus
Query: 534 taaacctgagccaaagccagagcctaaacccaaaccgaaaccagagccaaagccagagcc 593
|||||||||||| || || ||||||||||| | || || || ||||| || || |||||
Sbjct: 79 taaacctgagcctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcc 138
Query: 594 acaaccaaaaccagagcctaagccagagcctaaacccgaaccgaaaccggagcc 647
| || || || |||||||| || || |||||||| ||||||||||| |||||
Sbjct: 139 tgagcctaagcctgagcctaaacctgaacctaaacctgaaccgaaacctgagcc 192
Score = 42.1 bits (21), Expect = 0.064
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctga 542
|||| ||||||||||| ||||| |||||||| || || | |||||||||
Sbjct: 189 agcctaaacctgaacctaaacctgagcctaaacctgaacctaaacctga 237
Score = 42.1 bits (21), Expect = 0.064
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1003 aagccagagcctaaacctgaaccaaaacc 1031
||||| ||||||||||||||||| |||||
Sbjct: 146 aagcctgagcctaaacctgaacctaaacc 174
Score = 42.1 bits (21), Expect = 0.064
Identities = 62/76 (81%), Gaps = 6/76 (7%)
Strand = Plus / Plus
Query: 956 agccaaagcctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagccta 1015
|||| ||||||||||||||||| ||||| | |||| ||||| || || |||||||
Sbjct: 141 agcctaagcctgagcctaaacctgaaccta------aacctgaaccgaaacctgagccta 194
Query: 1016 aacctgaaccaaaacc 1031
|||||||||| |||||
Sbjct: 195 aacctgaacctaaacc 210
Score = 42.1 bits (21), Expect = 0.064
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 919 gagccaaagccagagcctaagcccgaaccaaaaccaaagccaaagcctgagcctaaaccc 978
||||| ||||| |||||||| || ||||| ||||| | || || ||||||||||||||
Sbjct: 140 gagcctaagcctgagcctaaacctgaacctaaacctgaaccgaaacctgagcctaaacct 199
Query: 979 gaacc 983
|||||
Sbjct: 200 gaacc 204
Score = 40.1 bits (20), Expect = 0.25
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacctgaaccaaaacc 1031
|||| ||||| || || ||||||||||||||||| |||||
Sbjct: 195 aacctgaacctaaacctgagcctaaacctgaacctaaacc 234
Score = 40.1 bits (20), Expect = 0.25
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 436 cctgaacctaagcccgaacctaagccagagcctaagcccgaacctaaa 483
||||||||||| || ||||| || || |||||||| || |||||||||
Sbjct: 161 cctgaacctaaacctgaaccgaaacctgagcctaaacctgaacctaaa 208
>gb|BX254718.1|BX254718 BX254718 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP103C03, mRNA sequence
Length = 581
Score = 60.0 bits (30), Expect = 3e-007
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccag 553
|||| |||||||| || ||||| || ||||| || |||| |||||||||||| ||||| |
Sbjct: 342 agcctaaacctgagcctaaacctgaacctaaacctgagcctaaacctgagcctaagcctg 401
Query: 554 agcctaaacc 563
||||||||||
Sbjct: 402 agcctaaacc 411
Score = 58.0 bits (29), Expect = 1e-006
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccag 553
|||| ||||||||||| ||||| |||||||| || |||| ||| |||||||| || || |
Sbjct: 354 agcctaaacctgaacctaaacctgagcctaaacctgagcctaagcctgagcctaaacctg 413
Query: 554 agcctaaac 562
|||||||||
Sbjct: 414 agcctaaac 422
Score = 56.0 bits (28), Expect = 4e-006
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 724 cctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaa 783
|||||||||||||| ||||| ||||| ||||| || || ||||||||||| || || |||
Sbjct: 350 cctgagcctaaacctgaacctaaacctgagcctaaacctgagcctaagcctgagcctaaa 409
Query: 784 ccagagcc 791
|| |||||
Sbjct: 410 cctgagcc 417
Score = 54.0 bits (27), Expect = 2e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 601 aaaccagagcctaagccagagcctaaacccgaaccgaaaccggagcc 647
|||||||||||||| || ||||||||||| ||||| ||||| |||||
Sbjct: 430 aaaccagagcctaaacctgagcctaaacctgaacctaaacctgagcc 476
Score = 52.0 bits (26), Expect = 7e-005
Identities = 68/82 (82%)
Strand = Plus / Plus
Query: 776 aaccaaaaccagagccaaagcctgagcctaaacccgaaccaaggccagaacctaagccag 835
|||| ||||| ||||| || |||||||||||||| ||||| | || || ||||| || |
Sbjct: 330 aacctaaacctgagcctaaacctgagcctaaacctgaacctaaacctgagcctaaacctg 389
Query: 836 agccaaagcctgagccgaaacc 857
|||| ||||||||||| |||||
Sbjct: 390 agcctaagcctgagcctaaacc 411
Score = 50.1 bits (25), Expect = 3e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 511 aaaccagagcctaagccagagcataaacctgagccaaagccagagcctaaacc 563
|||||||||||||| || |||| ||||||||| || || || |||||||||||
Sbjct: 430 aaaccagagcctaaacctgagcctaaacctgaacctaaacctgagcctaaacc 482
Score = 48.1 bits (24), Expect = 0.001
Identities = 76/92 (82%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 724 cctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaa 783
|||||||||||||| || || || || ||||| || || |||||||| | || || |||
Sbjct: 374 cctgagcctaaacctgagcctaagcctgagcctaaacctgagcctaaact-gaccctaaa 432
Query: 784 ccagagccaaagcctgagcctaaacccgaacc 815
|||||||| || |||||||||||||| |||||
Sbjct: 433 ccagagcctaaacctgagcctaaacctgaacc 464
Score = 48.1 bits (24), Expect = 0.001
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 730 cctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaaccagag 789
|||||||| || || ||||| ||||| || || || ||||| || || || ||||| |||
Sbjct: 332 cctaaacctgagcctaaacctgagcctaaacctgaacctaaacctgagcctaaacctgag 391
Query: 790 ccaaagcctgagcctaaacc 809
|| |||||||||||||||||
Sbjct: 392 cctaagcctgagcctaaacc 411
Score = 48.1 bits (24), Expect = 0.001
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 596 aaccaaaaccagagcctaagccagagcctaaacccgaaccgaaaccggagcc 647
|||| ||||| |||||||| || ||||||||||| ||||| ||||| |||||
Sbjct: 330 aacctaaacctgagcctaaacctgagcctaaacctgaacctaaacctgagcc 381
Score = 46.1 bits (23), Expect = 0.004
Identities = 56/67 (83%)
Strand = Plus / Plus
Query: 740 aaccaaaaccagagccaaagccagagcctaagcccgaaccaaaaccagagccaaagcctg 799
|||| ||||| ||||| || || |||||||| || ||||| ||||| ||||| || ||||
Sbjct: 330 aacctaaacctgagcctaaacctgagcctaaacctgaacctaaacctgagcctaaacctg 389
Query: 800 agcctaa 806
|||||||
Sbjct: 390 agcctaa 396
Score = 46.1 bits (23), Expect = 0.004
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 490 ccaaagccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaag 549
||||| || |||||||| || ||||| |||||||| || || | |||||||||||| ||
Sbjct: 326 ccaaaacctaaacctgagcctaaacctgagcctaaacctgaacctaaacctgagcctaaa 385
Query: 550 ccagagcctaa 560
|| ||||||||
Sbjct: 386 cctgagcctaa 396
Score = 44.1 bits (22), Expect = 0.016
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 664 cctaagccagagcctaagcctgagccgaaaccagaacc 701
||||| ||||||||||| |||||||| ||||| |||||
Sbjct: 427 cctaaaccagagcctaaacctgagcctaaacctgaacc 464
Score = 44.1 bits (22), Expect = 0.016
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaac 1096
|||||||||||||| || ||||| ||||||||||
Sbjct: 389 gagcctaagcctgagcctaaacctgagcctaaac 422
Score = 44.1 bits (22), Expect = 0.016
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 1066 cctaagcctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 332 cctaaacctgagcctaaacctgagcctaaacctgaacctaaacctgagcc 381
Score = 44.1 bits (22), Expect = 0.016
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 506 aaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagcctaaacc 563
|||| ||||| |||||||| || |||| ||||||||| || || || |||||||||||
Sbjct: 330 aacctaaacctgagcctaaacctgagcctaaacctgaacctaaacctgagcctaaacc 387
Score = 42.1 bits (21), Expect = 0.064
Identities = 64/77 (83%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 724 cctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaa 783
||||||||||||| || || ||||||||||| || || |||||||| || ||||| |||
Sbjct: 410 cctgagcctaaact-gaccctaaaccagagcctaaacctgagcctaaacctgaacctaaa 468
Query: 784 ccagagccaaagcctga 800
|| ||||| || |||||
Sbjct: 469 cctgagcctaaacctga 485
Score = 42.1 bits (21), Expect = 0.064
Identities = 73/89 (82%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaacca 780
||||||||||||||||| || || |||| || || || ||||||||||| || || ||
Sbjct: 395 aagcctgagcctaaacctgagcctaaact-gaccctaaaccagagcctaaacctgagcct 453
Query: 781 aaaccagagccaaagcctgagcctaaacc 809
||||| || || || ||||||||||||||
Sbjct: 454 aaacctgaacctaaacctgagcctaaacc 482
Score = 42.1 bits (21), Expect = 0.064
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 601 aaaccagagcctaagccagagcctaaacc 629
||||| ||||||||||| |||||||||||
Sbjct: 383 aaacctgagcctaagcctgagcctaaacc 411
Score = 42.1 bits (21), Expect = 0.064
Identities = 69/85 (81%)
Strand = Plus / Plus
Query: 724 cctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaa 783
|||||||||||||| || || ||||| || || || || |||||||| || || || ||
Sbjct: 338 cctgagcctaaacctgagcctaaacctgaacctaaacctgagcctaaacctgagcctaag 397
Query: 784 ccagagccaaagcctgagcctaaac 808
|| ||||| || |||||||||||||
Sbjct: 398 cctgagcctaaacctgagcctaaac 422
Score = 40.1 bits (20), Expect = 0.25
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacctgaaccaaaacc 1031
||||||| || || || ||||||||||||||||| |||||
Sbjct: 431 aaccagagcctaaacctgagcctaaacctgaacctaaacc 470
Score = 40.1 bits (20), Expect = 0.25
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 520 cctaagccagagcataaacctgagccaaagccagagcctaaacc 563
||||| ||||||| |||||||||||| || || || ||||||||
Sbjct: 427 cctaaaccagagcctaaacctgagcctaaacctgaacctaaacc 470
Score = 40.1 bits (20), Expect = 0.25
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 664 cctaagccagagcctaagcctgagccgaaacc 695
||||| || ||||||||||||||||| |||||
Sbjct: 380 cctaaacctgagcctaagcctgagcctaaacc 411
Score = 40.1 bits (20), Expect = 0.25
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 534 taaacctgagccaaagccagagcctaaacccaaaccgaaaccagagcc 581
|||||||||||| || || ||||||||||| |||| ||||| |||||
Sbjct: 334 taaacctgagcctaaacctgagcctaaacctgaacctaaacctgagcc 381
>gb|CX651082.1|CX651082 COLD1_50_B04.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_50_B04_A029 3', mRNA sequence
Length = 688
Score = 60.0 bits (30), Expect = 3e-007
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccag 553
|||| ||||||||||| ||||| |||||||| || |||| ||||||||| || || || |
Sbjct: 1 agcctaaacctgaaccgaaacctgagcctaaacctgagcctaaacctgaacctaaacctg 60
Query: 554 agcctaaacc 563
||||||||||
Sbjct: 61 agcctaaacc 70
Score = 48.1 bits (24), Expect = 0.001
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 596 aaccaaaaccagagcctaagccagagcctaaacccgaaccgaaaccggagcc 647
|||| ||||| |||||||| || ||||||||||| ||||| ||||| |||||
Sbjct: 13 aaccgaaacctgagcctaaacctgagcctaaacctgaacctaaacctgagcc 64
Score = 48.1 bits (24), Expect = 0.001
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 764 agcctaagcccgaaccaaaaccagagccaaagcctgagcctaaacccgaacc 815
||||||| || ||||| ||||| ||||| || |||||||||||||| |||||
Sbjct: 1 agcctaaacctgaaccgaaacctgagcctaaacctgagcctaaacctgaacc 52
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaacc 1109
|||||||| ||||| || ||||| ||||||||||| ||||| |||||
Sbjct: 36 gagcctaaacctgaacctaaacctgagcctaaacctgaacctaaacc 82
Score = 42.1 bits (21), Expect = 0.064
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctga 542
|||| ||||||||||| ||||| |||||||| || || | |||||||||
Sbjct: 37 agcctaaacctgaacctaaacctgagcctaaacctgaacctaaacctga 85
Score = 42.1 bits (21), Expect = 0.064
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 499 aaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagcct 558
|||||||| || ||||| |||||||| || || | |||||||||||| || || || |||
Sbjct: 18 aaacctgagcctaaacctgagcctaaacctgaacctaaacctgagcctaaacctgaacct 77
Query: 559 aaacc 563
|||||
Sbjct: 78 aaacc 82
Score = 40.1 bits (20), Expect = 0.25
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacctgaaccaaaacc 1031
|||| ||||| || || ||||||||||||||||| |||||
Sbjct: 43 aacctgaacctaaacctgagcctaaacctgaacctaaacc 82
Score = 40.1 bits (20), Expect = 0.25
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 724 cctgagcctaaaccagaaccaaaaccagagcc 755
|||||||||||||| ||||| ||||| |||||
Sbjct: 33 cctgagcctaaacctgaacctaaacctgagcc 64
Score = 40.1 bits (20), Expect = 0.25
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 1072 cctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 21 cctgagcctaaacctgagcctaaacctgaacctaaacctgagcc 64
Score = 40.1 bits (20), Expect = 0.25
Identities = 44/52 (84%)
Strand = Plus / Plus
Query: 932 agcctaagcccgaaccaaaaccaaagccaaagcctgagcctaaacccgaacc 983
||||||| || ||||| ||||| |||| || |||||||||||||| |||||
Sbjct: 1 agcctaaacctgaaccgaaacctgagcctaaacctgagcctaaacctgaacc 52
Score = 40.1 bits (20), Expect = 0.25
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 620 agcctaaacccgaaccgaaaccggagcc 647
|||||||||| ||||||||||| |||||
Sbjct: 1 agcctaaacctgaaccgaaacctgagcc 28
>gb|CF471753.1|CF471753 RTDS1_6_F06.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_6_F06_A015 5', mRNA sequence
Length = 772
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaacca 780
||||||||||||||||| || || ||||| || || || || |||||||| || |||||
Sbjct: 380 aagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcctaaacctgaacct 439
Query: 781 aaaccagagccaaagcctgagcctaaacc 809
||||| ||||| || ||||| ||||||||
Sbjct: 440 aaacctgagcctaaacctgaacctaaacc 468
Score = 58.0 bits (29), Expect = 1e-006
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
|||||||||||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 374 gagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcc 426
Score = 56.0 bits (28), Expect = 4e-006
Identities = 76/92 (82%)
Strand = Plus / Plus
Query: 664 cctaagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaag 723
||||| || ||||||||||||||||| ||||| ||||| |||| |||| | || ||
Sbjct: 335 cctaaacctgagcctaagcctgagcctaaacctgaacctgagcctaagcctgagcctaaa 394
Query: 724 cctgagcctaaaccagaaccaaaaccagagcc 755
|||||||||||||| ||||| ||||| |||||
Sbjct: 395 cctgagcctaaacctgaaccgaaacctgagcc 426
Score = 52.0 bits (26), Expect = 7e-005
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccag 553
|||| ||||||||||| ||||| |||||||| || || | |||||||||||| || || |
Sbjct: 399 agcctaaacctgaaccgaaacctgagcctaaacctgaacctaaacctgagcctaaacctg 458
Query: 554 agcctaaacc 563
| ||||||||
Sbjct: 459 aacctaaacc 468
Score = 52.0 bits (26), Expect = 7e-005
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 622 cctaaacccgaaccgaaaccggagccaaagccagagccccaacctaagccagagcctaag 681
|||||||| || || ||||| ||||| ||||| ||||| ||||| | || |||||||||
Sbjct: 323 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgaacctgagcctaag 382
Query: 682 cctgagccgaaacc 695
|||||||| |||||
Sbjct: 383 cctgagcctaaacc 396
Score = 50.1 bits (25), Expect = 3e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
|||||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 398 gagcctaaacctgaaccgaaacctgagcctaaacctgaacctaaacctgagcc 450
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 607 gagcctaagccagagcctaaacccgaaccgaaaccggagcc 647
|||||||| || ||||||||||| ||||||||||| |||||
Sbjct: 386 gagcctaaacctgagcctaaacctgaaccgaaacctgagcc 426
Score = 50.1 bits (25), Expect = 3e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 490 ccaaagccaaaacctgaaccaaaaccagagcctaagccagagcataaacctga 542
||||| || |||||||| || ||||| ||||||||||| |||| |||||||||
Sbjct: 317 ccaaaacctaaacctgagcctaaacctgagcctaagcctgagcctaaacctga 369
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 520 cctaagccagagcataaacctgagccaaagccagagcctaaacc 563
||||| || |||| |||||||||||| ||||| |||||||||||
Sbjct: 323 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacc 366
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaacc 1109
|||||||| ||||| || ||||| ||||||||||| ||||| |||||
Sbjct: 422 gagcctaaacctgaacctaaacctgagcctaaacctgaacctaaacc 468
Score = 46.1 bits (23), Expect = 0.004
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 571 aaaccagagccaaagccagagccacaaccaaaaccagagcctaagccagagcctaaacc 629
||||| ||||| ||||| ||||| |||| |||| ||||||||||| |||||||||||
Sbjct: 338 aaacctgagcctaagcctgagcctaaacctgaacctgagcctaagcctgagcctaaacc 396
Score = 46.1 bits (23), Expect = 0.004
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 781 aaaccagagccaaagcctgagcctaaacccgaacc 815
||||| ||||| ||||||||||||||||| |||||
Sbjct: 338 aaacctgagcctaagcctgagcctaaacctgaacc 372
Score = 46.1 bits (23), Expect = 0.004
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 601 aaaccagagcctaagccagagcctaaacccgaacc 635
||||| ||||||||||| ||||||||||| |||||
Sbjct: 338 aaacctgagcctaagcctgagcctaaacctgaacc 372
Score = 44.1 bits (22), Expect = 0.016
Identities = 67/82 (81%)
Strand = Plus / Plus
Query: 500 aacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagccta 559
||||||| || || || |||||||| || |||| ||||||||| || || || |||||||
Sbjct: 369 aacctgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagccta 428
Query: 560 aacccaaaccgaaaccagagcc 581
|||| |||| ||||| |||||
Sbjct: 429 aacctgaacctaaacctgagcc 450
Score = 44.1 bits (22), Expect = 0.016
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 746 aaccagagccaaagccagagcctaagcccgaaccaaaaccagagccaaagcctgagccta 805
|||| ||||| ||||| |||||||| || || || ||||| || || || ||||||||||
Sbjct: 369 aacctgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagccta 428
Query: 806 aacccgaacc 815
|||| |||||
Sbjct: 429 aacctgaacc 438
Score = 42.1 bits (21), Expect = 0.064
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctga 542
|||| ||||||||||| ||||| |||||||| || || | |||||||||
Sbjct: 423 agcctaaacctgaacctaaacctgagcctaaacctgaacctaaacctga 471
Score = 40.1 bits (20), Expect = 0.25
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacctgaaccaaaacc 1031
|||| ||||| || || ||||||||||||||||| |||||
Sbjct: 429 aacctgaacctaaacctgagcctaaacctgaacctaaacc 468
Score = 40.1 bits (20), Expect = 0.25
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacctgaaccaaaacc 1031
|||| ||||| || || ||||||||||||||||| |||||
Sbjct: 405 aacctgaaccgaaacctgagcctaaacctgaacctaaacc 444
Score = 40.1 bits (20), Expect = 0.25
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 956 agccaaagcctgagcctaaacccgaacc 983
|||| ||||||||||||||||| |||||
Sbjct: 345 agcctaagcctgagcctaaacctgaacc 372
Score = 40.1 bits (20), Expect = 0.25
Identities = 56/68 (82%)
Strand = Plus / Plus
Query: 964 cctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaaacctgaa 1023
||||||||||| || || || | ||| ||||| || || ||||| ||||||||||||||
Sbjct: 341 cctgagcctaagcctgagcctaaacctgaacctgagcctaagcctgagcctaaacctgag 400
Query: 1024 ccaaaacc 1031
|| |||||
Sbjct: 401 cctaaacc 408
Score = 40.1 bits (20), Expect = 0.25
Identities = 110/140 (78%)
Strand = Plus / Plus
Query: 676 cctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagcctgagcctaaa 735
||||| |||||||| ||||| || || ||||| ||||| |||| | |||||||||||
Sbjct: 323 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgaacctgagcctaag 382
Query: 736 ccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaaccagagccaaag 795
|| || || ||||| ||||| || || || || || || || || ||||| || || ||
Sbjct: 383 cctgagcctaaacctgagcctaaacctgaaccgaaacctgagcctaaacctgaacctaaa 442
Query: 796 cctgagcctaaacccgaacc 815
|||||||||||||| |||||
Sbjct: 443 cctgagcctaaacctgaacc 462
Score = 40.1 bits (20), Expect = 0.25
Identities = 74/92 (80%)
Strand = Plus / Plus
Query: 610 cctaagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaag 669
||||| || ||||||||||| || || || || ||||| || || || || | ||||||
Sbjct: 323 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgaacctgagcctaag 382
Query: 670 ccagagcctaagcctgagccgaaaccagaacc 701
|| |||||||| |||||||| ||||| |||||
Sbjct: 383 cctgagcctaaacctgagcctaaacctgaacc 414
>gb|CO160830.1|CO160830 FLD1_24_F09.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_24_F09_A029 5', mRNA sequence
Length = 822
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaacca 780
||||||||||||||||| || || ||||| || || || || |||||||| || |||||
Sbjct: 368 aagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcctaaacctgaacct 427
Query: 781 aaaccagagccaaagcctgagcctaaacc 809
||||| ||||| || ||||| ||||||||
Sbjct: 428 aaacctgagcctaaacctgaacctaaacc 456
Score = 58.0 bits (29), Expect = 1e-006
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
|||||||||||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 362 gagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcc 414
Score = 56.0 bits (28), Expect = 4e-006
Identities = 76/92 (82%)
Strand = Plus / Plus
Query: 664 cctaagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaag 723
||||| || ||||||||||||||||| ||||| ||||| |||| |||| | || ||
Sbjct: 323 cctaaacctgagcctaagcctgagcctaaacctgaacctgagcctaagcctgagcctaaa 382
Query: 724 cctgagcctaaaccagaaccaaaaccagagcc 755
|||||||||||||| ||||| ||||| |||||
Sbjct: 383 cctgagcctaaacctgaaccgaaacctgagcc 414
Score = 52.0 bits (26), Expect = 7e-005
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccag 553
|||| ||||||||||| ||||| |||||||| || || | |||||||||||| || || |
Sbjct: 387 agcctaaacctgaaccgaaacctgagcctaaacctgaacctaaacctgagcctaaacctg 446
Query: 554 agcctaaacc 563
| ||||||||
Sbjct: 447 aacctaaacc 456
Score = 52.0 bits (26), Expect = 7e-005
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 622 cctaaacccgaaccgaaaccggagccaaagccagagccccaacctaagccagagcctaag 681
|||||||| || || ||||| ||||| ||||| ||||| ||||| | || |||||||||
Sbjct: 311 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgaacctgagcctaag 370
Query: 682 cctgagccgaaacc 695
|||||||| |||||
Sbjct: 371 cctgagcctaaacc 384
Score = 50.1 bits (25), Expect = 3e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
|||||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 386 gagcctaaacctgaaccgaaacctgagcctaaacctgaacctaaacctgagcc 438
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 607 gagcctaagccagagcctaaacccgaaccgaaaccggagcc 647
|||||||| || ||||||||||| ||||||||||| |||||
Sbjct: 374 gagcctaaacctgagcctaaacctgaaccgaaacctgagcc 414
Score = 50.1 bits (25), Expect = 3e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 490 ccaaagccaaaacctgaaccaaaaccagagcctaagccagagcataaacctga 542
||||| || |||||||| || ||||| ||||||||||| |||| |||||||||
Sbjct: 305 ccaaaacctaaacctgagcctaaacctgagcctaagcctgagcctaaacctga 357
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 520 cctaagccagagcataaacctgagccaaagccagagcctaaacc 563
||||| || |||| |||||||||||| ||||| |||||||||||
Sbjct: 311 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacc 354
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaacc 1109
|||||||| ||||| || ||||| ||||||||||| ||||| |||||
Sbjct: 410 gagcctaaacctgaacctaaacctgagcctaaacctgaacctaaacc 456
Score = 46.1 bits (23), Expect = 0.004
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 571 aaaccagagccaaagccagagccacaaccaaaaccagagcctaagccagagcctaaacc 629
||||| ||||| ||||| ||||| |||| |||| ||||||||||| |||||||||||
Sbjct: 326 aaacctgagcctaagcctgagcctaaacctgaacctgagcctaagcctgagcctaaacc 384
Score = 46.1 bits (23), Expect = 0.004
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 781 aaaccagagccaaagcctgagcctaaacccgaacc 815
||||| ||||| ||||||||||||||||| |||||
Sbjct: 326 aaacctgagcctaagcctgagcctaaacctgaacc 360
Score = 46.1 bits (23), Expect = 0.004
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 601 aaaccagagcctaagccagagcctaaacccgaacc 635
||||| ||||||||||| ||||||||||| |||||
Sbjct: 326 aaacctgagcctaagcctgagcctaaacctgaacc 360
Score = 44.1 bits (22), Expect = 0.016
Identities = 67/82 (81%)
Strand = Plus / Plus
Query: 500 aacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagccta 559
||||||| || || || |||||||| || |||| ||||||||| || || || |||||||
Sbjct: 357 aacctgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagccta 416
Query: 560 aacccaaaccgaaaccagagcc 581
|||| |||| ||||| |||||
Sbjct: 417 aacctgaacctaaacctgagcc 438
Score = 44.1 bits (22), Expect = 0.016
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 746 aaccagagccaaagccagagcctaagcccgaaccaaaaccagagccaaagcctgagccta 805
|||| ||||| ||||| |||||||| || || || ||||| || || || ||||||||||
Sbjct: 357 aacctgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagccta 416
Query: 806 aacccgaacc 815
|||| |||||
Sbjct: 417 aacctgaacc 426
Score = 42.1 bits (21), Expect = 0.064
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctga 542
|||| ||||||||||| ||||| |||||||| || || | |||||||||
Sbjct: 411 agcctaaacctgaacctaaacctgagcctaaacctgaacctaaacctga 459
Score = 40.1 bits (20), Expect = 0.25
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacctgaaccaaaacc 1031
|||| ||||| || || ||||||||||||||||| |||||
Sbjct: 417 aacctgaacctaaacctgagcctaaacctgaacctaaacc 456
Score = 40.1 bits (20), Expect = 0.25
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacctgaaccaaaacc 1031
|||| ||||| || || ||||||||||||||||| |||||
Sbjct: 393 aacctgaaccgaaacctgagcctaaacctgaacctaaacc 432
Score = 40.1 bits (20), Expect = 0.25
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 956 agccaaagcctgagcctaaacccgaacc 983
|||| ||||||||||||||||| |||||
Sbjct: 333 agcctaagcctgagcctaaacctgaacc 360
Score = 40.1 bits (20), Expect = 0.25
Identities = 56/68 (82%)
Strand = Plus / Plus
Query: 964 cctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaaacctgaa 1023
||||||||||| || || || | ||| ||||| || || ||||| ||||||||||||||
Sbjct: 329 cctgagcctaagcctgagcctaaacctgaacctgagcctaagcctgagcctaaacctgag 388
Query: 1024 ccaaaacc 1031
|| |||||
Sbjct: 389 cctaaacc 396
Score = 40.1 bits (20), Expect = 0.25
Identities = 110/140 (78%)
Strand = Plus / Plus
Query: 676 cctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagcctgagcctaaa 735
||||| |||||||| ||||| || || ||||| ||||| |||| | |||||||||||
Sbjct: 311 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgaacctgagcctaag 370
Query: 736 ccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaaccagagccaaag 795
|| || || ||||| ||||| || || || || || || || || ||||| || || ||
Sbjct: 371 cctgagcctaaacctgagcctaaacctgaaccgaaacctgagcctaaacctgaacctaaa 430
Query: 796 cctgagcctaaacccgaacc 815
|||||||||||||| |||||
Sbjct: 431 cctgagcctaaacctgaacc 450
Score = 40.1 bits (20), Expect = 0.25
Identities = 74/92 (80%)
Strand = Plus / Plus
Query: 610 cctaagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaag 669
||||| || ||||||||||| || || || || ||||| || || || || | ||||||
Sbjct: 311 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgaacctgagcctaag 370
Query: 670 ccagagcctaagcctgagccgaaaccagaacc 701
|| |||||||| |||||||| ||||| |||||
Sbjct: 371 cctgagcctaaacctgagcctaaacctgaacc 402
>gb|CO172424.1|CO172424 NDL1_29_D09.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_29_D09_A029 5', mRNA sequence
Length = 819
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaacca 780
||||||||||||||||| || || ||||| || || || || |||||||| || |||||
Sbjct: 370 aagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcctaaacctgaacct 429
Query: 781 aaaccagagccaaagcctgagcctaaacc 809
||||| ||||| || ||||| ||||||||
Sbjct: 430 aaacctgagcctaaacctgaacctaaacc 458
Score = 58.0 bits (29), Expect = 1e-006
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
|||||||||||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 364 gagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcc 416
Score = 56.0 bits (28), Expect = 4e-006
Identities = 76/92 (82%)
Strand = Plus / Plus
Query: 664 cctaagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaag 723
||||| || ||||||||||||||||| ||||| ||||| |||| |||| | || ||
Sbjct: 325 cctaaacctgagcctaagcctgagcctaaacctgaacctgagcctaagcctgagcctaaa 384
Query: 724 cctgagcctaaaccagaaccaaaaccagagcc 755
|||||||||||||| ||||| ||||| |||||
Sbjct: 385 cctgagcctaaacctgaaccgaaacctgagcc 416
Score = 52.0 bits (26), Expect = 7e-005
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccag 553
|||| ||||||||||| ||||| |||||||| || || | |||||||||||| || || |
Sbjct: 389 agcctaaacctgaaccgaaacctgagcctaaacctgaacctaaacctgagcctaaacctg 448
Query: 554 agcctaaacc 563
| ||||||||
Sbjct: 449 aacctaaacc 458
Score = 52.0 bits (26), Expect = 7e-005
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 622 cctaaacccgaaccgaaaccggagccaaagccagagccccaacctaagccagagcctaag 681
|||||||| || || ||||| ||||| ||||| ||||| ||||| | || |||||||||
Sbjct: 313 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgaacctgagcctaag 372
Query: 682 cctgagccgaaacc 695
|||||||| |||||
Sbjct: 373 cctgagcctaaacc 386
Score = 50.1 bits (25), Expect = 3e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
|||||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 388 gagcctaaacctgaaccgaaacctgagcctaaacctgaacctaaacctgagcc 440
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 607 gagcctaagccagagcctaaacccgaaccgaaaccggagcc 647
|||||||| || ||||||||||| ||||||||||| |||||
Sbjct: 376 gagcctaaacctgagcctaaacctgaaccgaaacctgagcc 416
Score = 50.1 bits (25), Expect = 3e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 490 ccaaagccaaaacctgaaccaaaaccagagcctaagccagagcataaacctga 542
||||| || |||||||| || ||||| ||||||||||| |||| |||||||||
Sbjct: 307 ccaaaacctaaacctgagcctaaacctgagcctaagcctgagcctaaacctga 359
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 520 cctaagccagagcataaacctgagccaaagccagagcctaaacc 563
||||| || |||| |||||||||||| ||||| |||||||||||
Sbjct: 313 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacc 356
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaacc 1109
|||||||| ||||| || ||||| ||||||||||| ||||| |||||
Sbjct: 412 gagcctaaacctgaacctaaacctgagcctaaacctgaacctaaacc 458
Score = 46.1 bits (23), Expect = 0.004
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 571 aaaccagagccaaagccagagccacaaccaaaaccagagcctaagccagagcctaaacc 629
||||| ||||| ||||| ||||| |||| |||| ||||||||||| |||||||||||
Sbjct: 328 aaacctgagcctaagcctgagcctaaacctgaacctgagcctaagcctgagcctaaacc 386
Score = 46.1 bits (23), Expect = 0.004
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 781 aaaccagagccaaagcctgagcctaaacccgaacc 815
||||| ||||| ||||||||||||||||| |||||
Sbjct: 328 aaacctgagcctaagcctgagcctaaacctgaacc 362
Score = 46.1 bits (23), Expect = 0.004
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 601 aaaccagagcctaagccagagcctaaacccgaacc 635
||||| ||||||||||| ||||||||||| |||||
Sbjct: 328 aaacctgagcctaagcctgagcctaaacctgaacc 362
Score = 44.1 bits (22), Expect = 0.016
Identities = 67/82 (81%)
Strand = Plus / Plus
Query: 500 aacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagccta 559
||||||| || || || |||||||| || |||| ||||||||| || || || |||||||
Sbjct: 359 aacctgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagccta 418
Query: 560 aacccaaaccgaaaccagagcc 581
|||| |||| ||||| |||||
Sbjct: 419 aacctgaacctaaacctgagcc 440
Score = 44.1 bits (22), Expect = 0.016
Identities = 58/70 (82%)
Strand = Plus / Plus
Query: 746 aaccagagccaaagccagagcctaagcccgaaccaaaaccagagccaaagcctgagccta 805
|||| ||||| ||||| |||||||| || || || ||||| || || || ||||||||||
Sbjct: 359 aacctgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagccta 418
Query: 806 aacccgaacc 815
|||| |||||
Sbjct: 419 aacctgaacc 428
Score = 42.1 bits (21), Expect = 0.064
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctga 542
|||| ||||||||||| ||||| |||||||| || || | |||||||||
Sbjct: 413 agcctaaacctgaacctaaacctgagcctaaacctgaacctaaacctga 461
Score = 40.1 bits (20), Expect = 0.25
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacctgaaccaaaacc 1031
|||| ||||| || || ||||||||||||||||| |||||
Sbjct: 419 aacctgaacctaaacctgagcctaaacctgaacctaaacc 458
Score = 40.1 bits (20), Expect = 0.25
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacctgaaccaaaacc 1031
|||| ||||| || || ||||||||||||||||| |||||
Sbjct: 395 aacctgaaccgaaacctgagcctaaacctgaacctaaacc 434
Score = 40.1 bits (20), Expect = 0.25
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 956 agccaaagcctgagcctaaacccgaacc 983
|||| ||||||||||||||||| |||||
Sbjct: 335 agcctaagcctgagcctaaacctgaacc 362
Score = 40.1 bits (20), Expect = 0.25
Identities = 56/68 (82%)
Strand = Plus / Plus
Query: 964 cctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaaacctgaa 1023
||||||||||| || || || | ||| ||||| || || ||||| ||||||||||||||
Sbjct: 331 cctgagcctaagcctgagcctaaacctgaacctgagcctaagcctgagcctaaacctgag 390
Query: 1024 ccaaaacc 1031
|| |||||
Sbjct: 391 cctaaacc 398
Score = 40.1 bits (20), Expect = 0.25
Identities = 110/140 (78%)
Strand = Plus / Plus
Query: 676 cctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagcctgagcctaaa 735
||||| |||||||| ||||| || || ||||| ||||| |||| | |||||||||||
Sbjct: 313 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgaacctgagcctaag 372
Query: 736 ccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaaccagagccaaag 795
|| || || ||||| ||||| || || || || || || || || ||||| || || ||
Sbjct: 373 cctgagcctaaacctgagcctaaacctgaaccgaaacctgagcctaaacctgaacctaaa 432
Query: 796 cctgagcctaaacccgaacc 815
|||||||||||||| |||||
Sbjct: 433 cctgagcctaaacctgaacc 452
Score = 40.1 bits (20), Expect = 0.25
Identities = 74/92 (80%)
Strand = Plus / Plus
Query: 610 cctaagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaag 669
||||| || ||||||||||| || || || || ||||| || || || || | ||||||
Sbjct: 313 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgaacctgagcctaag 372
Query: 670 ccagagcctaagcctgagccgaaaccagaacc 701
|| |||||||| |||||||| ||||| |||||
Sbjct: 373 cctgagcctaaacctgagcctaaacctgaacc 404
>gb|DR014914.1|DR014914 HEAT1_52_H06.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_52_H06_A029 3', mRNA sequence
Length = 831
Score = 58.0 bits (29), Expect = 1e-006
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
|||||||||||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 269 gagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcc 217
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaacca 780
||||||||||||||||| || || ||||| || || || || |||||||| || |||||
Sbjct: 263 aagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcctaaacctgaacct 204
Query: 781 aaaccagagccaaagcctgagcctaaacc 809
||||| ||||| || ||||| ||||||||
Sbjct: 203 aaacctgagcctaaacctgaacctaaacc 175
Score = 56.0 bits (28), Expect = 4e-006
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 664 cctaagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaag 723
||||| || ||||||||||||||||| ||||| ||||| |||| |||| | || ||
Sbjct: 308 cctaaacctgagcctaagcctgagcctaaacctgaacctgagcctaagcctgagcctaaa 249
Query: 724 cctgagcctaaaccagaaccaaaaccagagcc 755
|||||||||||||| ||||| ||||| |||||
Sbjct: 248 cctgagcctaaacctgaaccgaaacctgagcc 217
Score = 52.0 bits (26), Expect = 7e-005
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 622 cctaaacccgaaccgaaaccggagccaaagccagagccccaacctaagccagagcctaag 681
|||||||| || || ||||| ||||| ||||| ||||| ||||| | || |||||||||
Sbjct: 320 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgaacctgagcctaag 261
Query: 682 cctgagccgaaacc 695
|||||||| |||||
Sbjct: 260 cctgagcctaaacc 247
Score = 52.0 bits (26), Expect = 7e-005
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccag 553
|||| ||||||||||| ||||| |||||||| || || | |||||||||||| || || |
Sbjct: 244 agcctaaacctgaaccgaaacctgagcctaaacctgaacctaaacctgagcctaaacctg 185
Query: 554 agcctaaacc 563
| ||||||||
Sbjct: 184 aacctaaacc 175
Score = 50.1 bits (25), Expect = 3e-004
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 490 ccaaagccaaaacctgaaccaaaaccagagcctaagccagagcataaacctga 542
||||| || |||||||| || ||||| ||||||||||| |||| |||||||||
Sbjct: 326 ccaaaacctaaacctgagcctaaacctgagcctaagcctgagcctaaacctga 274
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 607 gagcctaagccagagcctaaacccgaaccgaaaccggagcc 647
|||||||| || ||||||||||| ||||||||||| |||||
Sbjct: 257 gagcctaaacctgagcctaaacctgaaccgaaacctgagcc 217
Score = 50.1 bits (25), Expect = 3e-004
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
|||||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 245 gagcctaaacctgaaccgaaacctgagcctaaacctgaacctaaacctgagcc 193
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 520 cctaagccagagcataaacctgagccaaagccagagcctaaacc 563
||||| || |||| |||||||||||| ||||| |||||||||||
Sbjct: 320 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacc 277
Score = 46.1 bits (23), Expect = 0.004
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 601 aaaccagagcctaagccagagcctaaacccgaacc 635
||||| ||||||||||| ||||||||||| |||||
Sbjct: 305 aaacctgagcctaagcctgagcctaaacctgaacc 271
Score = 46.1 bits (23), Expect = 0.004
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 781 aaaccagagccaaagcctgagcctaaacccgaacc 815
||||| ||||| ||||||||||||||||| |||||
Sbjct: 305 aaacctgagcctaagcctgagcctaaacctgaacc 271
Score = 46.1 bits (23), Expect = 0.004
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 571 aaaccagagccaaagccagagccacaaccaaaaccagagcctaagccagagcctaaacc 629
||||| ||||| ||||| ||||| |||| |||| ||||||||||| |||||||||||
Sbjct: 305 aaacctgagcctaagcctgagcctaaacctgaacctgagcctaagcctgagcctaaacc 247
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaacc 1109
|||||||| ||||| || ||||| ||||||||||| ||||| |||||
Sbjct: 221 gagcctaaacctgaacctaaacctgagcctaaacctgaacctaaacc 175
Score = 44.1 bits (22), Expect = 0.016
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 512 aaccagagcctaagccagagcataaacctgagcc 545
|||| ||||||||||| |||| ||||||||||||
Sbjct: 274 aacctgagcctaagcctgagcctaaacctgagcc 241
Score = 44.1 bits (22), Expect = 0.016
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 746 aaccagagccaaagccagagcctaagcccgaaccaaaaccagagccaaagcctgagccta 805
|||| ||||| ||||| |||||||| || || || ||||| || || || ||||||||||
Sbjct: 274 aacctgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagccta 215
Query: 806 aacccgaacc 815
|||| |||||
Sbjct: 214 aacctgaacc 205
Score = 44.1 bits (22), Expect = 0.016
Identities = 67/82 (81%)
Strand = Plus / Minus
Query: 500 aacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagccta 559
||||||| || || || |||||||| || |||| ||||||||| || || || |||||||
Sbjct: 274 aacctgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagccta 215
Query: 560 aacccaaaccgaaaccagagcc 581
|||| |||| ||||| |||||
Sbjct: 214 aacctgaacctaaacctgagcc 193
Score = 42.1 bits (21), Expect = 0.064
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctga 542
|||| ||||||||||| ||||| |||||||| || || | |||||||||
Sbjct: 220 agcctaaacctgaacctaaacctgagcctaaacctgaacctaaacctga 172
Score = 40.1 bits (20), Expect = 0.25
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 956 agccaaagcctgagcctaaacccgaacc 983
|||| ||||||||||||||||| |||||
Sbjct: 298 agcctaagcctgagcctaaacctgaacc 271
Score = 40.1 bits (20), Expect = 0.25
Identities = 56/68 (82%)
Strand = Plus / Minus
Query: 964 cctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaaacctgaa 1023
||||||||||| || || || | ||| ||||| || || ||||| ||||||||||||||
Sbjct: 302 cctgagcctaagcctgagcctaaacctgaacctgagcctaagcctgagcctaaacctgag 243
Query: 1024 ccaaaacc 1031
|| |||||
Sbjct: 242 cctaaacc 235
Score = 40.1 bits (20), Expect = 0.25
Identities = 74/92 (80%)
Strand = Plus / Minus
Query: 610 cctaagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaag 669
||||| || ||||||||||| || || || || ||||| || || || || | ||||||
Sbjct: 320 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgaacctgagcctaag 261
Query: 670 ccagagcctaagcctgagccgaaaccagaacc 701
|| |||||||| |||||||| ||||| |||||
Sbjct: 260 cctgagcctaaacctgagcctaaacctgaacc 229
Score = 40.1 bits (20), Expect = 0.25
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 992 aaccagaaccaaagccagagcctaaacctgaaccaaaacc 1031
|||| ||||| || || ||||||||||||||||| |||||
Sbjct: 238 aacctgaaccgaaacctgagcctaaacctgaacctaaacc 199
Score = 40.1 bits (20), Expect = 0.25
Identities = 110/140 (78%)
Strand = Plus / Minus
Query: 676 cctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagcctgagcctaaa 735
||||| |||||||| ||||| || || ||||| ||||| |||| | |||||||||||
Sbjct: 320 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgaacctgagcctaag 261
Query: 736 ccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaaccagagccaaag 795
|| || || ||||| ||||| || || || || || || || || ||||| || || ||
Sbjct: 260 cctgagcctaaacctgagcctaaacctgaaccgaaacctgagcctaaacctgaacctaaa 201
Query: 796 cctgagcctaaacccgaacc 815
|||||||||||||| |||||
Sbjct: 200 cctgagcctaaacctgaacc 181
Score = 40.1 bits (20), Expect = 0.25
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 992 aaccagaaccaaagccagagcctaaacctgaaccaaaacc 1031
|||| ||||| || || ||||||||||||||||| |||||
Sbjct: 214 aacctgaacctaaacctgagcctaaacctgaacctaaacc 175
>gb|DR015000.1|DR015000 HEAT1_52_H06.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_52_H06_A029 5', mRNA sequence
Length = 763
Score = 58.0 bits (29), Expect = 1e-006
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
|||||||||||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 702 gagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcc 650
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 721 aagcctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaacca 780
||||||||||||||||| || || ||||| || || || || |||||||| || |||||
Sbjct: 696 aagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagcctaaacctgaacct 637
Query: 781 aaaccagagccaaagcctgagcctaaacc 809
||||| ||||| || ||||| ||||||||
Sbjct: 636 aaacctgagcctaaacctgaacctaaacc 608
Score = 56.0 bits (28), Expect = 4e-006
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 664 cctaagccagagcctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaag 723
||||| || ||||||||||||||||| ||||| ||||| |||| |||| | || ||
Sbjct: 741 cctaaacctgagcctaagcctgagcctaaacctgaacctgagcctaagcctgagcctaaa 682
Query: 724 cctgagcctaaaccagaaccaaaaccagagcc 755
|||||||||||||| ||||| ||||| |||||
Sbjct: 681 cctgagcctaaacctgaaccgaaacctgagcc 650
Score = 52.0 bits (26), Expect = 7e-005
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 622 cctaaacccgaaccgaaaccggagccaaagccagagccccaacctaagccagagcctaag 681
|||||||| || || ||||| ||||| ||||| ||||| ||||| | || |||||||||
Sbjct: 753 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgaacctgagcctaag 694
Query: 682 cctgagccgaaacc 695
|||||||| |||||
Sbjct: 693 cctgagcctaaacc 680
Score = 52.0 bits (26), Expect = 7e-005
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccag 553
|||| ||||||||||| ||||| |||||||| || || | |||||||||||| || || |
Sbjct: 677 agcctaaacctgaaccgaaacctgagcctaaacctgaacctaaacctgagcctaaacctg 618
Query: 554 agcctaaacc 563
| ||||||||
Sbjct: 617 aacctaaacc 608
Score = 50.1 bits (25), Expect = 3e-004
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 490 ccaaagccaaaacctgaaccaaaaccagagcctaagccagagcataaacctga 542
||||| || |||||||| || ||||| ||||||||||| |||| |||||||||
Sbjct: 759 ccaaaacctaaacctgagcctaaacctgagcctaagcctgagcctaaacctga 707
Score = 50.1 bits (25), Expect = 3e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 607 gagcctaagccagagcctaaacccgaaccgaaaccggagcc 647
|||||||| || ||||||||||| ||||||||||| |||||
Sbjct: 690 gagcctaaacctgagcctaaacctgaaccgaaacctgagcc 650
Score = 50.1 bits (25), Expect = 3e-004
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
|||||||| ||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 678 gagcctaaacctgaaccgaaacctgagcctaaacctgaacctaaacctgagcc 626
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 520 cctaagccagagcataaacctgagccaaagccagagcctaaacc 563
||||| || |||| |||||||||||| ||||| |||||||||||
Sbjct: 753 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacc 710
Score = 46.1 bits (23), Expect = 0.004
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 601 aaaccagagcctaagccagagcctaaacccgaacc 635
||||| ||||||||||| ||||||||||| |||||
Sbjct: 738 aaacctgagcctaagcctgagcctaaacctgaacc 704
Score = 46.1 bits (23), Expect = 0.004
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 781 aaaccagagccaaagcctgagcctaaacccgaacc 815
||||| ||||| ||||||||||||||||| |||||
Sbjct: 738 aaacctgagcctaagcctgagcctaaacctgaacc 704
Score = 46.1 bits (23), Expect = 0.004
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 571 aaaccagagccaaagccagagccacaaccaaaaccagagcctaagccagagcctaaacc 629
||||| ||||| ||||| ||||| |||| |||| ||||||||||| |||||||||||
Sbjct: 738 aaacctgagcctaagcctgagcctaaacctgaacctgagcctaagcctgagcctaaacc 680
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaacc 1109
|||||||| ||||| || ||||| ||||||||||| ||||| |||||
Sbjct: 654 gagcctaaacctgaacctaaacctgagcctaaacctgaacctaaacc 608
Score = 44.1 bits (22), Expect = 0.016
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 512 aaccagagcctaagccagagcataaacctgagcc 545
|||| ||||||||||| |||| ||||||||||||
Sbjct: 707 aacctgagcctaagcctgagcctaaacctgagcc 674
Score = 44.1 bits (22), Expect = 0.016
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 746 aaccagagccaaagccagagcctaagcccgaaccaaaaccagagccaaagcctgagccta 805
|||| ||||| ||||| |||||||| || || || ||||| || || || ||||||||||
Sbjct: 707 aacctgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagccta 648
Query: 806 aacccgaacc 815
|||| |||||
Sbjct: 647 aacctgaacc 638
Score = 44.1 bits (22), Expect = 0.016
Identities = 67/82 (81%)
Strand = Plus / Minus
Query: 500 aacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagccta 559
||||||| || || || |||||||| || |||| ||||||||| || || || |||||||
Sbjct: 707 aacctgagcctaagcctgagcctaaacctgagcctaaacctgaaccgaaacctgagccta 648
Query: 560 aacccaaaccgaaaccagagcc 581
|||| |||| ||||| |||||
Sbjct: 647 aacctgaacctaaacctgagcc 626
Score = 42.1 bits (21), Expect = 0.064
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctga 542
|||| ||||||||||| ||||| |||||||| || || | |||||||||
Sbjct: 653 agcctaaacctgaacctaaacctgagcctaaacctgaacctaaacctga 605
Score = 40.1 bits (20), Expect = 0.25
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 956 agccaaagcctgagcctaaacccgaacc 983
|||| ||||||||||||||||| |||||
Sbjct: 731 agcctaagcctgagcctaaacctgaacc 704
Score = 40.1 bits (20), Expect = 0.25
Identities = 56/68 (82%)
Strand = Plus / Minus
Query: 964 cctgagcctaaacccgaaccaagaccagaaccagaaccaaagccagagcctaaacctgaa 1023
||||||||||| || || || | ||| ||||| || || ||||| ||||||||||||||
Sbjct: 735 cctgagcctaagcctgagcctaaacctgaacctgagcctaagcctgagcctaaacctgag 676
Query: 1024 ccaaaacc 1031
|| |||||
Sbjct: 675 cctaaacc 668
Score = 40.1 bits (20), Expect = 0.25
Identities = 74/92 (80%)
Strand = Plus / Minus
Query: 610 cctaagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaag 669
||||| || ||||||||||| || || || || ||||| || || || || | ||||||
Sbjct: 753 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgaacctgagcctaag 694
Query: 670 ccagagcctaagcctgagccgaaaccagaacc 701
|| |||||||| |||||||| ||||| |||||
Sbjct: 693 cctgagcctaaacctgagcctaaacctgaacc 662
Score = 40.1 bits (20), Expect = 0.25
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 992 aaccagaaccaaagccagagcctaaacctgaaccaaaacc 1031
|||| ||||| || || ||||||||||||||||| |||||
Sbjct: 671 aacctgaaccgaaacctgagcctaaacctgaacctaaacc 632
Score = 40.1 bits (20), Expect = 0.25
Identities = 110/140 (78%)
Strand = Plus / Minus
Query: 676 cctaagcctgagccgaaaccagaaccaaagccagagccacaaccaaagcctgagcctaaa 735
||||| |||||||| ||||| || || ||||| ||||| |||| | |||||||||||
Sbjct: 753 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgaacctgagcctaag 694
Query: 736 ccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaaccagagccaaag 795
|| || || ||||| ||||| || || || || || || || || ||||| || || ||
Sbjct: 693 cctgagcctaaacctgagcctaaacctgaaccgaaacctgagcctaaacctgaacctaaa 634
Query: 796 cctgagcctaaacccgaacc 815
|||||||||||||| |||||
Sbjct: 633 cctgagcctaaacctgaacc 614
Score = 40.1 bits (20), Expect = 0.25
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 992 aaccagaaccaaagccagagcctaaacctgaaccaaaacc 1031
|||| ||||| || || ||||||||||||||||| |||||
Sbjct: 647 aacctgaacctaaacctgagcctaaacctgaacctaaacc 608
>gb|BF186408.1|BF186408 NXCI_137_A08_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_137_A08 5' similar to Arabidopsis
thaliana sequence At5g26690 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 540
Score = 56.0 bits (28), Expect = 4e-006
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 490 ccaaagccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagcc 545
||||| || |||||||| || ||||| ||||||||||| |||| ||||||||||||
Sbjct: 324 ccaaaacctaaacctgagcctaaacctgagcctaagcctgagcctaaacctgagcc 379
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 520 cctaagccagagcataaacctgagccaaagccagagcctaaacc 563
||||| || |||| |||||||||||| ||||| |||||||||||
Sbjct: 330 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacc 373
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaacc 1109
|||||||| ||||| || ||||| ||||||||||| ||||| |||||
Sbjct: 441 gagcctaaacctgaacctaaacctgagcctaaacctgaacctaaacc 487
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 601 aaaccagagcctaagccagagcctaaacccgaaccgaaaccggagcc 647
||||| |||||||| || ||||||||||| ||||| ||||| |||||
Sbjct: 423 aaacctgagcctaaacctgagcctaaacctgaacctaaacctgagcc 469
Score = 42.1 bits (21), Expect = 0.064
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctga 542
|||| ||||||||||| ||||| |||||||| || || | |||||||||
Sbjct: 442 agcctaaacctgaacctaaacctgagcctaaacctgaacctaaacctga 490
Score = 42.1 bits (21), Expect = 0.064
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 499 aaacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagcct 558
|||||||| || ||||| |||||||| || || | |||||||||||| || || || |||
Sbjct: 423 aaacctgagcctaaacctgagcctaaacctgaacctaaacctgagcctaaacctgaacct 482
Query: 559 aaacc 563
|||||
Sbjct: 483 aaacc 487
Score = 42.1 bits (21), Expect = 0.064
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 781 aaaccagagccaaagcctgagcctaaacc 809
||||| ||||| |||||||||||||||||
Sbjct: 345 aaacctgagcctaagcctgagcctaaacc 373
Score = 42.1 bits (21), Expect = 0.064
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 601 aaaccagagcctaagccagagcctaaacc 629
||||| ||||||||||| |||||||||||
Sbjct: 345 aaacctgagcctaagcctgagcctaaacc 373
Score = 40.1 bits (20), Expect = 0.25
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 992 aaccagaaccaaagccagagcctaaacctgaaccaaaacc 1031
|||| ||||| || || ||||||||||||||||| |||||
Sbjct: 448 aacctgaacctaaacctgagcctaaacctgaacctaaacc 487
Score = 40.1 bits (20), Expect = 0.25
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 724 cctgagcctaaaccagaaccaaaaccagagcc 755
|||||||||||||| ||||| ||||| |||||
Sbjct: 438 cctgagcctaaacctgaacctaaacctgagcc 469
Score = 40.1 bits (20), Expect = 0.25
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 1072 cctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 426 cctgagcctaaacctgagcctaaacctgaacctaaacctgagcc 469
Score = 40.1 bits (20), Expect = 0.25
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 664 cctaagccagagcctaagcctgagccgaaacc 695
||||| || ||||||||||||||||| |||||
Sbjct: 342 cctaaacctgagcctaagcctgagcctaaacc 373
>gb|BM492803.1|BM492803 NXRV_031_C05_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_031_C05 5' similar to Arabidopsis thaliana
sequence At5g26690 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 450
Score = 56.0 bits (28), Expect = 4e-006
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 1058 agccagagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
|||| ||||||||| |||||| ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 356 agcctgagcctaagnntgatcctaaacctgagcctaaacctgaaccgaaacctgagcc 413
Score = 52.0 bits (26), Expect = 7e-005
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctgagcc 545
|||| |||||||| | ||||| ||||||||||| |||| ||||||||||||
Sbjct: 308 agcctaaacctgannctaaacctgagcctaagcctgagcctaaacctgagcc 359
Score = 48.1 bits (24), Expect = 0.001
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 506 aaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagcctaaacc 563
|||| ||||| |||||||| || || |||||||||||| ||||| |||||||||||
Sbjct: 296 aacctaaacctgagcctaaacctgannctaaacctgagcctaagcctgagcctaaacc 353
Score = 44.1 bits (22), Expect = 0.016
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 610 cctaagccagagcctaaacccgaaccgaaaccggagcc 647
||||| || ||||||||||| ||||||||||| |||||
Sbjct: 376 cctaaacctgagcctaaacctgaaccgaaacctgagcc 413
Score = 44.1 bits (22), Expect = 0.016
Identities = 59/72 (81%)
Strand = Plus / Plus
Query: 610 cctaagccagagcctaaacccgaaccgaaaccggagccaaagccagagccccaacctaag 669
||||| || ||||||||||| || | ||||| ||||| ||||| ||||| ||||| ||
Sbjct: 298 cctaaacctgagcctaaacctgannctaaacctgagcctaagcctgagcctaaacctgag 357
Query: 670 ccagagcctaag 681
|| |||||||||
Sbjct: 358 cctgagcctaag 369
Score = 42.1 bits (21), Expect = 0.064
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 781 aaaccagagccaaagcctgagcctaaacc 809
||||| ||||| |||||||||||||||||
Sbjct: 325 aaacctgagcctaagcctgagcctaaacc 353
Score = 42.1 bits (21), Expect = 0.064
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 601 aaaccagagcctaagccagagcctaaacc 629
||||| ||||||||||| |||||||||||
Sbjct: 325 aaacctgagcctaagcctgagcctaaacc 353
Score = 42.1 bits (21), Expect = 0.064
Identities = 40/47 (85%)
Strand = Plus / Plus
Query: 724 cctgagcctaaaccagaaccaaaaccagagccaaagccagagcctaa 770
|||||||||||||| || | ||||| ||||| ||||| ||||||||
Sbjct: 304 cctgagcctaaacctgannctaaacctgagcctaagcctgagcctaa 350
Score = 40.1 bits (20), Expect = 0.25
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 724 cctgagcctaaaccagaaccaaaaccagagcc 755
|||||||||||||| ||||| ||||| |||||
Sbjct: 382 cctgagcctaaacctgaaccgaaacctgagcc 413
>gb|BF186410.1|BF186410 NXCI_137_A09_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_137_A09 5' similar to Arabidopsis
thaliana sequence At5g26690 unknown protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 385
Score = 50.1 bits (25), Expect = 3e-004
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 490 ccaaagccaaaacctgaaccaaaaccagagcctaagccagagcataaacctga 542
||||| || |||||||| || ||||| ||||||||||| |||| |||||||||
Sbjct: 324 ccaaaacctaaacctgagcctaaacctgagcctaagcctgagcctaaacctga 376
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 520 cctaagccagagcataaacctgagccaaagccagagcctaaacc 563
||||| || |||| |||||||||||| ||||| |||||||||||
Sbjct: 330 cctaaacctgagcctaaacctgagcctaagcctgagcctaaacc 373
Score = 42.1 bits (21), Expect = 0.064
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 781 aaaccagagccaaagcctgagcctaaacc 809
||||| ||||| |||||||||||||||||
Sbjct: 345 aaacctgagcctaagcctgagcctaaacc 373
Score = 42.1 bits (21), Expect = 0.064
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 601 aaaccagagcctaagccagagcctaaacc 629
||||| ||||||||||| |||||||||||
Sbjct: 345 aaacctgagcctaagcctgagcctaaacc 373
Score = 40.1 bits (20), Expect = 0.25
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 664 cctaagccagagcctaagcctgagccgaaacc 695
||||| || ||||||||||||||||| |||||
Sbjct: 342 cctaaacctgagcctaagcctgagcctaaacc 373
>gb|DR058037.1|DR058037 RTNIT1_9_G06.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_9_G06_A029 3', mRNA sequence
Length = 401
Score = 48.1 bits (24), Expect = 0.001
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 500 aacctgaaccaaaaccagagcctaagccagagcataaacctgagccaaagccagagccta 559
|||||||||| ||||| |||||||| || || | |||||||||||| || || || ||||
Sbjct: 401 aacctgaaccgaaacctgagcctaaacctgaacctaaacctgagcctaaacctgaaccta 342
Query: 560 aacc 563
||||
Sbjct: 341 aacc 338
Score = 46.1 bits (23), Expect = 0.004
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 1063 gagcctaagcctgatccaaaaccagagcctaaacccgaaccaaaacc 1109
|||||||| ||||| || ||||| ||||||||||| ||||| |||||
Sbjct: 384 gagcctaaacctgaacctaaacctgagcctaaacctgaacctaaacc 338
Score = 42.1 bits (21), Expect = 0.064
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 494 agccaaaacctgaaccaaaaccagagcctaagccagagcataaacctga 542
|||| ||||||||||| ||||| |||||||| || || | |||||||||
Sbjct: 383 agcctaaacctgaacctaaacctgagcctaaacctgaacctaaacctga 335
Score = 40.1 bits (20), Expect = 0.25
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 992 aaccagaaccaaagccagagcctaaacctgaaccaaaacc 1031
|||| ||||| || || ||||||||||||||||| |||||
Sbjct: 401 aacctgaaccgaaacctgagcctaaacctgaacctaaacc 362
Score = 40.1 bits (20), Expect = 0.25
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 1072 cctgatccaaaaccagagcctaaacccgaaccaaaaccagagcc 1115
||||| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 399 cctgaaccgaaacctgagcctaaacctgaacctaaacctgagcc 356
Score = 40.1 bits (20), Expect = 0.25
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 724 cctgagcctaaaccagaaccaaaaccagagcc 755
|||||||||||||| ||||| ||||| |||||
Sbjct: 387 cctgagcctaaacctgaacctaaacctgagcc 356
Score = 40.1 bits (20), Expect = 0.25
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 992 aaccagaaccaaagccagagcctaaacctgaaccaaaacc 1031
|||| ||||| || || ||||||||||||||||| |||||
Sbjct: 377 aacctgaacctaaacctgagcctaaacctgaacctaaacc 338
>emb|CR377871.1| Pinus pinaster SSR, clone PPB3A06
Length = 582
Score = 48.1 bits (24), Expect = 0.001
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 902 agccagaaccaaaaccagagccaaagccagag 933
||||||| ||||| ||||||||||||||||||
Sbjct: 301 agccagagccaaagccagagccaaagccagag 270
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 748 ccagagccaaagccagagcctaagcc 773
|||||||||||||||||||| |||||
Sbjct: 299 ccagagccaaagccagagccaaagcc 274
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 916 ccagagccaaagccagagcctaagcc 941
|||||||||||||||||||| |||||
Sbjct: 299 ccagagccaaagccagagccaaagcc 274
Score = 44.1 bits (22), Expect = 0.016
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 736 ccagaaccaaaaccagagccaaagccagag 765
||||| ||||| ||||||||||||||||||
Sbjct: 299 ccagagccaaagccagagccaaagccagag 270
Score = 42.1 bits (21), Expect = 0.064
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 574 ccagagccaaagccagagcca 594
|||||||||||||||||||||
Sbjct: 299 ccagagccaaagccagagcca 279
Score = 42.1 bits (21), Expect = 0.064
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 876 agagccacaaccaaagccagagcctaagccaga 908
||||||| | |||||||||||||| ||||||||
Sbjct: 303 agagccagagccaaagccagagccaaagccaga 271
>emb|CR377872.1| Pinus pinaster SSR, clone PPB3A06r
Length = 536
Score = 48.1 bits (24), Expect = 0.001
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 902 agccagaaccaaaaccagagccaaagccagag 933
||||||| ||||| ||||||||||||||||||
Sbjct: 295 agccagagccaaagccagagccaaagccagag 326
Score = 44.1 bits (22), Expect = 0.016
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 736 ccagaaccaaaaccagagccaaagccagag 765
||||| ||||| ||||||||||||||||||
Sbjct: 297 ccagagccaaagccagagccaaagccagag 326
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 916 ccagagccaaagccagagcctaagcc 941
|||||||||||||||||||| |||||
Sbjct: 297 ccagagccaaagccagagccaaagcc 322
Score = 44.1 bits (22), Expect = 0.016
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 748 ccagagccaaagccagagcctaagcc 773
|||||||||||||||||||| |||||
Sbjct: 297 ccagagccaaagccagagccaaagcc 322
Score = 42.1 bits (21), Expect = 0.064
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 574 ccagagccaaagccagagcca 594
|||||||||||||||||||||
Sbjct: 297 ccagagccaaagccagagcca 317
Score = 42.1 bits (21), Expect = 0.064
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 876 agagccacaaccaaagccagagcctaagccaga 908
||||||| | |||||||||||||| ||||||||
Sbjct: 293 agagccagagccaaagccagagccaaagccaga 325
>gb|BX678974.1|BX678974 BX678974 RS Pinus pinaster cDNA clone RS17G11, mRNA sequence
Length = 475
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 987 accagaaccagaaccaaagccagagcc 1013
|||||||||||||||| ||||||||||
Sbjct: 41 accagaaccagaaccatagccagagcc 15
Score = 40.1 bits (20), Expect = 0.25
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 692 aaccagaaccaaagccagagccacaacc 719
||||||||||| ||||||||||| ||||
Sbjct: 36 aaccagaaccatagccagagccagaacc 9
>gb|BX679248.1|BX679248 BX679248 RS Pinus pinaster cDNA clone RS22A06, mRNA sequence
Length = 475
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 987 accagaaccagaaccaaagccagagcc 1013
|||||||||||||||| ||||||||||
Sbjct: 443 accagaaccagaaccatagccagagcc 417
Score = 40.1 bits (20), Expect = 0.25
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 692 aaccagaaccaaagccagagccacaacc 719
||||||||||| ||||||||||| ||||
Sbjct: 438 aaccagaaccatagccagagccagaacc 411
>gb|BX679283.1|BX679283 BX679283 RS Pinus pinaster cDNA clone RS22D11, mRNA sequence
Length = 447
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 987 accagaaccagaaccaaagccagagcc 1013
|||||||||||||||| ||||||||||
Sbjct: 48 accagaaccagaaccatagccagagcc 22
Score = 40.1 bits (20), Expect = 0.25
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 692 aaccagaaccaaagccagagccacaacc 719
||||||||||| ||||||||||| ||||
Sbjct: 43 aaccagaaccatagccagagccagaacc 16
>gb|BX680516.1|BX680516 BX680516 RS Pinus pinaster cDNA clone RS44F12, mRNA sequence
Length = 553
Score = 46.1 bits (23), Expect = 0.004
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 987 accagaaccagaaccaaagccagagcc 1013
|||||||||||||||| ||||||||||
Sbjct: 200 accagaaccagaaccatagccagagcc 174
Score = 40.1 bits (20), Expect = 0.25
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 692 aaccagaaccaaagccagagccacaacc 719
||||||||||| ||||||||||| ||||
Sbjct: 195 aaccagaaccatagccagagccagaacc 168
>gb|CF387221.1|CF387221 RTDR1_11_A11.g1_A015 Loblolly pine roots recovering from drought
DR1 Pinus taeda cDNA clone RTDR1_11_A11_A015 5', mRNA
sequence
Length = 372
Score = 44.1 bits (22), Expect = 0.016
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 572 aaccagagccaaagccagagccacaaccaaaacc 605
||||||||||| ||||||||||| ||||| ||||
Sbjct: 220 aaccagagccagagccagagccagaaccagaacc 187
>gb|CF401620.1|CF401620 RTWW1_13_G10.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_13_G10_A015 5', mRNA sequence
Length = 756
Score = 44.1 bits (22), Expect = 0.016
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 729 gcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaacca 786
|||||||||||| ||| | || ||||| ||||||||||| || |||||||| |||||
Sbjct: 58 gcctaaaccagacccagaccctgagcctgagccagagcctgaggccgaaccagaacca 1
>gb|DR050498.1|DR050498 RTBOR1_23_H11.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_23_H11_A029 5', mRNA sequence
Length = 732
Score = 44.1 bits (22), Expect = 0.016
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 729 gcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaacca 786
|||||||||||| ||| | || ||||| ||||||||||| || |||||||| |||||
Sbjct: 286 gcctaaaccagacccagaccctgagcctgagccagagcctgaggccgaaccagaacca 229
>gb|DR056656.1|DR056656 RTCA1_31_E08.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_31_E08_A029 5', mRNA sequence
Length = 311
Score = 44.1 bits (22), Expect = 0.016
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 729 gcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaacca 786
|||||||||||| ||| | || ||||| ||||||||||| || |||||||| |||||
Sbjct: 278 gcctaaaccagacccagaccctgagcctgagccagagcctgaggccgaaccagaacca 221
>gb|DR090249.1|DR090249 RTAL1_13_E12.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_13_E12_A029 5', mRNA sequence
Length = 881
Score = 44.1 bits (22), Expect = 0.016
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 729 gcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaacca 786
|||||||||||| ||| | || ||||| ||||||||||| || |||||||| |||||
Sbjct: 306 gcctaaaccagacccagaccctgagcctgagccagagcctgaggccgaaccagaacca 249
>gb|DR118950.1|DR118950 RTMG1_20_E09.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_20_E09_A029 3', mRNA sequence
Length = 758
Score = 44.1 bits (22), Expect = 0.016
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 729 gcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaacca 786
|||||||||||| ||| | || ||||| ||||||||||| || |||||||| |||||
Sbjct: 207 gcctaaaccagacccagaccctgagcctgagccagagcctgaggccgaaccagaacca 150
>gb|DR119031.1|DR119031 RTMG1_20_E09.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_20_E09_A029 5', mRNA sequence
Length = 635
Score = 44.1 bits (22), Expect = 0.016
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 729 gcctaaaccagaaccaaaaccagagccaaagccagagcctaagcccgaaccaaaacca 786
|||||||||||| ||| | || ||||| ||||||||||| || |||||||| |||||
Sbjct: 285 gcctaaaccagacccagaccctgagcctgagccagagcctgaggccgaaccagaacca 228
>gb|CO165521.1|CO165521 FLD1_55_C10.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_55_C10_A029 3', mRNA sequence
Length = 771
Score = 42.1 bits (21), Expect = 0.064
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 572 aaccagagccaaagccagagccacaaccaaaaccaga 608
||||||||||| |||| |||||| ||||| |||||||
Sbjct: 107 aaccagagccagagccggagccagaaccagaaccaga 71
Score = 42.1 bits (21), Expect = 0.064
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 884 aaccaaagccagagcctaagccagaaccaaaaccaga 920
||||| |||||||||| ||||||||||| |||||||
Sbjct: 107 aaccagagccagagccggagccagaaccagaaccaga 71
>gb|CV035142.1|CV035142 RTNACL1_13_H02.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_13_H02_A029 5', mRNA sequence
Length = 774
Score = 42.1 bits (21), Expect = 0.064
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 884 aaccaaagccagagcctaagccagaaccaaaaccaga 920
||||| |||||||||| ||||||||||| |||||||
Sbjct: 685 aaccagagccagagccggagccagaaccagaaccaga 721
Score = 42.1 bits (21), Expect = 0.064
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 572 aaccagagccaaagccagagccacaaccaaaaccaga 608
||||||||||| |||| |||||| ||||| |||||||
Sbjct: 685 aaccagagccagagccggagccagaaccagaaccaga 721
>gb|AY867635.1| Pinus taeda isolate FBRC6 putative cell-wall protein (lp5) gene,
partial cds
Length = 496
Score = 42.1 bits (21), Expect = 0.064
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 572 aaccagagccaaagccagagccacaaccaaaaccaga 608
||||||||||| |||| |||||| ||||| |||||||
Sbjct: 278 aaccagagccagagccggagccagaaccagaaccaga 242
Score = 42.1 bits (21), Expect = 0.064
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 884 aaccaaagccagagcctaagccagaaccaaaaccaga 920
||||| |||||||||| ||||||||||| |||||||
Sbjct: 278 aaccagagccagagccggagccagaaccagaaccaga 242
>gb|AY867640.1| Pinus taeda isolate FBRC31 putative cell-wall protein (lp5) gene,
partial cds
Length = 496
Score = 42.1 bits (21), Expect = 0.064
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 572 aaccagagccaaagccagagccacaaccaaaaccaga 608
||||||||||| |||| |||||| ||||| |||||||
Sbjct: 278 aaccagagccagagccggagccagaaccagaaccaga 242
Score = 42.1 bits (21), Expect = 0.064
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 884 aaccaaagccagagcctaagccagaaccaaaaccaga 920
||||| |||||||||| ||||||||||| |||||||
Sbjct: 278 aaccagagccagagccggagccagaaccagaaccaga 242
>gb|AY867649.1| Pinus taeda isolate FBRC10 putative cell-wall protein (lp5) gene,
partial cds
Length = 496
Score = 42.1 bits (21), Expect = 0.064
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 572 aaccagagccaaagccagagccacaaccaaaaccaga 608
||||||||||| |||| |||||| ||||| |||||||
Sbjct: 278 aaccagagccagagccggagccagaaccagaaccaga 242
Score = 42.1 bits (21), Expect = 0.064
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 884 aaccaaagccagagcctaagccagaaccaaaaccaga 920
||||| |||||||||| ||||||||||| |||||||
Sbjct: 278 aaccagagccagagccggagccagaaccagaaccaga 242
>gb|AY867661.1| Pinus taeda isolate FBRC29 putative cell-wall protein (lp5) gene,
partial cds
Length = 496
Score = 42.1 bits (21), Expect = 0.064
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 572 aaccagagccaaagccagagccacaaccaaaaccaga 608
||||||||||| |||| |||||| ||||| |||||||
Sbjct: 278 aaccagagccagagccggagccagaaccagaaccaga 242
Score = 42.1 bits (21), Expect = 0.064
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 884 aaccaaagccagagcctaagccagaaccaaaaccaga 920
||||| |||||||||| ||||||||||| |||||||
Sbjct: 278 aaccagagccagagccggagccagaaccagaaccaga 242
>gb|CF385312.1|CF385312 RTDR1_3_B03.b1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_3_B03_A015 3', mRNA
sequence
Length = 385
Score = 40.1 bits (20), Expect = 0.25
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 739 gaaccaaaaccagagccaaa 758
||||||||||||||||||||
Sbjct: 95 gaaccaaaaccagagccaaa 76
Score = 40.1 bits (20), Expect = 0.25
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 775 gaaccaaaaccagagccaaa 794
||||||||||||||||||||
Sbjct: 95 gaaccaaaaccagagccaaa 76
Score = 40.1 bits (20), Expect = 0.25
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 907 gaaccaaaaccagagccaaa 926
||||||||||||||||||||
Sbjct: 95 gaaccaaaaccagagccaaa 76
>gb|CO201172.1|CO201172 RTCNT2_4_C08.b1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_4_C08_A029 3', mRNA sequence
Length = 801
Score = 40.1 bits (20), Expect = 0.25
Identities = 53/64 (82%)
Strand = Plus / Minus
Query: 687 gccgaaaccagaaccaaagccagagccacaaccaaagcctgagcctaaaccagaaccaaa 746
|||| |||||| |||| ||||||||||| |||| |||| | ||| ||||||||||| |
Sbjct: 126 gccggaaccagcaccatagccagagccagaaccggagccagcgccataaccagaaccaga 67
Query: 747 acca 750
||||
Sbjct: 66 acca 63
>gb|DR182335.1|DR182335 RTMNUT1_44_H05.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_44_H05_A029 3', mRNA sequence
Length = 698
Score = 40.1 bits (20), Expect = 0.25
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 890 agccagagcctaagccagaaccaaaaccagagccaaagccagag 933
||||||| ||| |||| || ||| ||||||||||| ||||||||
Sbjct: 153 agccagaccctgagcctgagccagaaccagagccagagccagag 110
>emb|CR378126.1| Pinus pinaster SSR, clone PPB2H06
Length = 535
Score = 40.1 bits (20), Expect = 0.25
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 750 agagccaaagccagagcctaagcc 773
|||||||||||||||||| |||||
Sbjct: 229 agagccaaagccagagccaaagcc 206
Score = 40.1 bits (20), Expect = 0.25
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 918 agagccaaagccagagcctaagcc 941
|||||||||||||||||| |||||
Sbjct: 229 agagccaaagccagagccaaagcc 206
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 221,891
Number of Sequences: 355925
Number of extensions: 221891
Number of successful extensions: 71154
Number of sequences better than 0.5: 42
Number of HSP's better than 0.5 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69628
Number of HSP's gapped (non-prelim): 1185
length of query: 1471
length of database: 217,277,237
effective HSP length: 19
effective length of query: 1452
effective length of database: 210,514,662
effective search space: 305667289224
effective search space used: 305667289224
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)