BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2550113.2.1
(803 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL750317.1|AL750317 AL750317 RN Pinus pinaster cDNA clon... 84 1e-014
gb|BX249526.1|BX249526 BX249526 Pinus pinaster differenciat... 84 1e-014
gb|BX250231.1|BX250231 BX250231 Pinus pinaster differenciat... 84 1e-014
gb|BX252257.1|BX252257 BX252257 Pinus pinaster differenciat... 84 1e-014
gb|BX252258.1|BX252258 BX252258 Pinus pinaster differenciat... 84 1e-014
gb|BX253440.1|BX253440 BX253440 Pinus pinaster differenciat... 84 1e-014
gb|BX676882.1|BX676882 BX676882 RN Pinus pinaster cDNA clon... 84 1e-014
gb|BX682720.1|BX682720 BX682720 Pinus pinaster differenciat... 84 1e-014
gb|CR392712.1|CR392712 CR392712 RN Pinus pinaster cDNA clon... 84 1e-014
gb|AW042692.1|AW042692 ST23D06 Pine TriplEx shoot tip libra... 76 2e-012
gb|AW290179.1|AW290179 NXNV015A05F Nsf Xylem Normal wood Ve... 76 2e-012
gb|AW982027.1|AW982027 PC23A03 Pine TriplEx pollen cone lib... 76 2e-012
gb|BE496395.1|BE496395 NXCI_017_D01_F NXCI (Nsf Xylem Compr... 76 2e-012
gb|BE496610.1|BE496610 NXCI_021_G01_F NXCI (Nsf Xylem Compr... 76 2e-012
gb|BE643823.1|BE643823 NXCI_047_F11_F NXCI (Nsf Xylem Compr... 76 2e-012
gb|BF010485.1|BF010485 NXCI_084_E08_F NXCI (Nsf Xylem Compr... 76 2e-012
gb|BF518220.1|BF518220 NXSI_036_E04_F NXSI (Nsf Xylem Side ... 76 2e-012
gb|BF609105.1|BF609105 NXSI_040_D10_F NXSI (Nsf Xylem Side ... 76 2e-012
gb|BG040040.1|BG040040 NXSI_105_H03_F NXSI (Nsf Xylem Side ... 76 2e-012
gb|BG040349.1|BG040349 NXSI_107_C07_F NXSI (Nsf Xylem Side ... 76 2e-012
gb|BQ697224.1|BQ697224 NXPV_051_A06_F NXPV (Nsf Xylem Plani... 76 2e-012
gb|BQ699020.1|BQ699020 NXRV118_D10_F NXRV (Nsf Xylem Root w... 76 2e-012
gb|BQ699236.1|BQ699236 NXRV121_B09_F NXRV (Nsf Xylem Root w... 76 2e-012
gb|BQ700831.1|BQ700831 NXRV112_A06_F NXRV (Nsf Xylem Root w... 76 2e-012
gb|CD026825.1|CD026825 NXNV015A05 Nsf Xylem Normal wood Ver... 76 2e-012
gb|CF392690.1|CF392690 RTDR3_5_E02.g1_A022 Loblolly pine ro... 76 2e-012
gb|CF395922.1|CF395922 RTDS2_19_G07.g1_A021 Drought-stresse... 76 2e-012
gb|CF471664.1|CF471664 RTDS1_6_G10.b1_A015 Drought-stressed... 76 2e-012
gb|CO165995.1|CO165995 FLD1_58_C11.g1_A029 Root flooded Pin... 76 2e-012
gb|CO361147.1|CO361147 NDL2_3_C03.b1_A029 Needles control 2... 76 2e-012
gb|CV035135.1|CV035135 RTNACL1_13_G07.g1_A029 Roots plus ad... 76 2e-012
gb|CV036384.1|CV036384 RTNACL1_58_H09.g1_A029 Roots plus ad... 76 2e-012
gb|CX646462.1|CX646462 COLD1_9_B07.g1_A029 Root cold Pinus ... 76 2e-012
gb|CX648845.1|CX648845 COLD1_31_G04.b1_A029 Root cold Pinus... 76 2e-012
gb|CX648922.1|CX648922 COLD1_31_G04.g1_A029 Root cold Pinus... 76 2e-012
gb|CX651289.1|CX651289 COLD1_51_H09.b1_A029 Root cold Pinus... 76 2e-012
gb|CX651369.1|CX651369 COLD1_51_H09.g1_A029 Root cold Pinus... 76 2e-012
gb|CX715540.1|CX715540 RTPQ1_34_G10.g1_A032 Roots treated w... 76 2e-012
gb|DR088564.1|DR088564 RTAL1_2_F09.g1_A029 Roots plus added... 76 2e-012
gb|DR167170.1|DR167170 RTPHOS1_17_D09.b1_A029 Roots minus p... 76 2e-012
gb|DR744690.1|DR744690 RTCU1_24_E12.b1_A029 Roots plus adde... 76 2e-012
gb|DR744762.1|DR744762 RTCU1_24_E12.g1_A029 Roots plus adde... 76 2e-012
gb|DR745218.1|DR745218 RTCU1_27_H05.g1_A029 Roots plus adde... 76 2e-012
gb|BX254650.1|BX254650 BX254650 Pinus pinaster differenciat... 74 1e-011
gb|CF470303.1|CF470303 RTDS1_18_D01.g1_A015 Drought-stresse... 68 6e-010
gb|CF470550.1|CF470550 RTDS1_13_E11.b1_A015 Drought-stresse... 68 6e-010
gb|CF470616.1|CF470616 RTDS1_13_E11.g1_A015 Drought-stresse... 68 6e-010
gb|AW758637.1|AW758637 NXNV_084_E03_F Nsf Xylem Normal wood... 66 2e-009
gb|BF777173.1|BF777173 NXSI_066_C03_F NXSI (Nsf Xylem Side ... 66 2e-009
gb|BG275457.1|BG275457 NXSI_139_A08_F NXSI (Nsf Xylem Side ... 66 2e-009
gb|CD021794.1|CD021794 NXNV_139_D08_F Nsf Xylem Normal wood... 66 2e-009
gb|CF395863.1|CF395863 RTDS2_19_G07.b1_A021 Drought-stresse... 66 2e-009
gb|CF470225.1|CF470225 RTDS1_18_D01.b1_A015 Drought-stresse... 66 2e-009
gb|CF665886.1|CF665886 RTCNT1_19_F01.b1_A029 Root control P... 66 2e-009
gb|CO158538.1|CO158538 FLD1_7_C05.g1_A029 Root flooded Pinu... 66 2e-009
gb|CV035055.1|CV035055 RTNACL1_13_G07.b1_A029 Roots plus ad... 66 2e-009
gb|DR016754.1|DR016754 STRS1_12_A09.b1_A034 Shoot tip pitch... 66 2e-009
gb|DR016831.1|DR016831 STRS1_12_A09.g1_A034 Shoot tip pitch... 66 2e-009
gb|DR021458.1|DR021458 STRS1_44_F12.g1_A034 Shoot tip pitch... 66 2e-009
gb|DR388591.1|DR388591 RTHG1_29_F03.b1_A029 Roots plus adde... 66 2e-009
gb|DR745149.1|DR745149 RTCU1_27_H05.b1_A029 Roots plus adde... 66 2e-009
gb|AW043347.1|AW043347 ST32C07 Pine TriplEx shoot tip libra... 64 9e-009
gb|BE209319.1|BE209319 NXNV_166_C12_F Nsf Xylem Normal wood... 64 9e-009
gb|BQ697040.1|BQ697040 NXPV_048_E08_F NXPV (Nsf Xylem Plani... 64 9e-009
gb|BX681218.1|BX681218 BX681218 RS Pinus pinaster cDNA clon... 64 9e-009
gb|DN626735.1|DN626735 EST977551 Subtracted pine embryo lib... 64 9e-009
gb|DN632945.1|DN632945 EST983761 Subtracted pine embryo lib... 64 9e-009
gb|AW226048.1|AW226048 ST76G04 Pine TriplEx shoot tip libra... 60 1e-007
gb|BE187400.1|BE187400 NXNV_163_E06_F Nsf Xylem Normal wood... 60 1e-007
gb|BE209328.1|BE209328 NXNV_166_D11_F Nsf Xylem Normal wood... 60 1e-007
gb|AW289731.1|AW289731 NXNV005H09F Nsf Xylem Normal wood Ve... 58 6e-007
gb|CD028348.1|CD028348 NXNV005H09 Nsf Xylem Normal wood Ver... 58 6e-007
gb|BX680042.1|BX680042 BX680042 RS Pinus pinaster cDNA clon... 58 6e-007
gb|DT630198.1|DT630198 EST1154610 Subtracted pine embryo li... 58 6e-007
gb|BM367137.1|BM367137 NXLV_045_B03_F NXLV (Nsf Xylem Late ... 56 2e-006
gb|DN614818.1|DN614818 EST967868 Subtracted pine embryo lib... 56 2e-006
gb|DT629098.1|DT629098 EST1155668 Subtracted pine embryo li... 56 2e-006
gb|DT629483.1|DT629483 EST1156053 Subtracted pine embryo li... 54 9e-006
gb|DT630628.1|DT630628 EST1155040 Subtracted pine embryo li... 54 9e-006
gb|BG317448.1|BG317448 NXPV_001_H10_F NXPV (Nsf Xylem Plani... 52 4e-005
gb|CN852416.1|CN852416 H1 Healthy pine stem suppression sub... 52 4e-005
gb|DN614457.1|DN614457 EST967507 Subtracted pine embryo lib... 52 4e-005
gb|DN614720.1|DN614720 EST967770 Subtracted pine embryo lib... 52 4e-005
gb|DN615211.1|DN615211 EST968261 Subtracted pine embryo lib... 52 4e-005
gb|DT628034.1|DT628034 EST1156783 Subtracted pine embryo li... 52 4e-005
gb|DT629299.1|DT629299 EST1155869 Subtracted pine embryo li... 52 4e-005
gb|DT630160.1|DT630160 EST1154572 Subtracted pine embryo li... 52 4e-005
gb|DT630236.1|DT630236 EST1154648 Subtracted pine embryo li... 52 4e-005
gb|DT630272.1|DT630272 EST1154684 Subtracted pine embryo li... 52 4e-005
gb|BF610330.1|BF610330 NXSI_057_H08_F NXSI (Nsf Xylem Side ... 50 1e-004
gb|BM133475.1|BM133475 NXLV_007_A05_F NXLV (Nsf Xylem Late ... 50 1e-004
gb|BQ696622.1|BQ696622 NXPV_043_D08_F NXPV (Nsf Xylem Plani... 50 1e-004
gb|BX681771.1|BX681771 BX681771 RS Pinus pinaster cDNA clon... 50 1e-004
gb|CX652961.1|CX652961 COLD1_62_C04.g1_A029 Root cold Pinus... 50 1e-004
gb|CX712435.1|CX712435 RTPQ1_2_B07.g2_A032 Roots treated wi... 50 1e-004
gb|DN628003.1|DN628003 EST978819 Subtracted pine embryo lib... 50 1e-004
gb|DN629391.1|DN629391 EST980207 Subtracted pine embryo lib... 50 1e-004
gb|DN631511.1|DN631511 EST982327 Subtracted pine embryo lib... 50 1e-004
gb|DN631551.1|DN631551 EST982367 Subtracted pine embryo lib... 50 1e-004
gb|DR088508.1|DR088508 RTAL1_2_F09.b1_A029 Roots plus added... 50 1e-004
gb|DR110501.1|DR110501 RTS1_11_F07.b1_A029 Roots minus sulf... 50 1e-004
gb|DT628914.1|DT628914 EST1155484 Subtracted pine embryo li... 50 1e-004
gb|DT629935.1|DT629935 EST1154347 Subtracted pine embryo li... 50 1e-004
gb|DT630108.1|DT630108 EST1154520 Subtracted pine embryo li... 50 1e-004
gb|DT630431.1|DT630431 EST1154843 Subtracted pine embryo li... 50 1e-004
gb|DT630533.1|DT630533 EST1154945 Subtracted pine embryo li... 50 1e-004
gb|AW289956.1|AW289956 NXNV008B09F Nsf Xylem Normal wood Ve... 48 6e-004
gb|BX000658.1|BX000658 BX000658 Pinus pinaster xylem Pinus ... 48 6e-004
gb|CD026597.1|CD026597 NXNV008B09 Nsf Xylem Normal wood Ver... 48 6e-004
gb|BX511047.1|BX511047 BX511047 Pinus pinaster induced comp... 48 6e-004
gb|CR394040.1|CR394040 CR394040 RN Pinus pinaster cDNA clon... 48 6e-004
gb|CN852410.1|CN852410 H15 Healthy pine stem suppression su... 48 6e-004
gb|CN852417.1|CN852417 H29 Healthy pine stem suppression su... 48 6e-004
gb|CN852432.1|CN852432 H35 Healthy pine stem suppression su... 48 6e-004
gb|CN852438.1|CN852438 H3 Healthy pine stem suppression sub... 48 6e-004
gb|CN852448.1|CN852448 H6 Healthy pine stem suppression sub... 48 6e-004
gb|CO158463.1|CO158463 FLD1_7_C05.b1_A029 Root flooded Pinu... 48 6e-004
gb|DN608624.1|DN608624 EST961674 Subtracted pine embryo lib... 48 6e-004
gb|DN609110.1|DN609110 EST962160 Subtracted pine embryo lib... 48 6e-004
gb|DN609311.1|DN609311 EST962361 Subtracted pine embryo lib... 48 6e-004
gb|DN609661.1|DN609661 EST962711 Subtracted pine embryo lib... 48 6e-004
gb|DN609774.1|DN609774 EST962824 Subtracted pine embryo lib... 48 6e-004
gb|DN609848.1|DN609848 EST962898 Subtracted pine embryo lib... 48 6e-004
gb|DN609916.1|DN609916 EST962966 Subtracted pine embryo lib... 48 6e-004
gb|DN610046.1|DN610046 EST963096 Subtracted pine embryo lib... 48 6e-004
gb|DN610547.1|DN610547 EST963597 Subtracted pine embryo lib... 48 6e-004
gb|DN611197.1|DN611197 EST964247 Subtracted pine embryo lib... 48 6e-004
gb|DN611492.1|DN611492 EST964542 Subtracted pine embryo lib... 48 6e-004
gb|DN612185.1|DN612185 EST965235 Subtracted pine embryo lib... 48 6e-004
gb|DN612293.1|DN612293 EST965343 Subtracted pine embryo lib... 48 6e-004
gb|DN612311.1|DN612311 EST965361 Subtracted pine embryo lib... 48 6e-004
gb|DN612328.1|DN612328 EST965378 Subtracted pine embryo lib... 48 6e-004
gb|DN612428.1|DN612428 EST965478 Subtracted pine embryo lib... 48 6e-004
gb|DN612450.1|DN612450 EST965500 Subtracted pine embryo lib... 48 6e-004
gb|DN612456.1|DN612456 EST965506 Subtracted pine embryo lib... 48 6e-004
gb|DN612830.1|DN612830 EST965880 Subtracted pine embryo lib... 48 6e-004
gb|DN614149.1|DN614149 EST967199 Subtracted pine embryo lib... 48 6e-004
gb|DN614388.1|DN614388 EST967438 Subtracted pine embryo lib... 48 6e-004
gb|DN615105.1|DN615105 EST968155 Subtracted pine embryo lib... 48 6e-004
gb|DN615151.1|DN615151 EST968201 Subtracted pine embryo lib... 48 6e-004
gb|DN615234.1|DN615234 EST968284 Subtracted pine embryo lib... 48 6e-004
gb|DN615446.1|DN615446 EST968496 Subtracted pine embryo lib... 48 6e-004
gb|DN615502.1|DN615502 EST968552 Subtracted pine embryo lib... 48 6e-004
gb|DN615643.1|DN615643 EST968693 Subtracted pine embryo lib... 48 6e-004
gb|DT627925.1|DT627925 EST1156674 Subtracted pine embryo li... 48 6e-004
gb|DT627937.1|DT627937 EST1156686 Subtracted pine embryo li... 48 6e-004
gb|DT627945.1|DT627945 EST1156694 Subtracted pine embryo li... 48 6e-004
gb|DT627981.1|DT627981 EST1156730 Subtracted pine embryo li... 48 6e-004
gb|DT628068.1|DT628068 EST1156817 Subtracted pine embryo li... 48 6e-004
gb|DT628191.1|DT628191 EST1156940 Subtracted pine embryo li... 48 6e-004
gb|DT628307.1|DT628307 EST1157056 Subtracted pine embryo li... 48 6e-004
gb|DT628353.1|DT628353 EST1157102 Subtracted pine embryo li... 48 6e-004
gb|DT628565.1|DT628565 EST1157314 Subtracted pine embryo li... 48 6e-004
gb|DT628646.1|DT628646 EST1155216 Subtracted pine embryo li... 48 6e-004
gb|DT628742.1|DT628742 EST1155312 Subtracted pine embryo li... 48 6e-004
gb|DT628756.1|DT628756 EST1155326 Subtracted pine embryo li... 48 6e-004
gb|DT628875.1|DT628875 EST1155445 Subtracted pine embryo li... 48 6e-004
gb|DT628981.1|DT628981 EST1155551 Subtracted pine embryo li... 48 6e-004
gb|DT629091.1|DT629091 EST1155661 Subtracted pine embryo li... 48 6e-004
gb|DT629112.1|DT629112 EST1155682 Subtracted pine embryo li... 48 6e-004
gb|DT629156.1|DT629156 EST1155726 Subtracted pine embryo li... 48 6e-004
gb|DT629431.1|DT629431 EST1156001 Subtracted pine embryo li... 48 6e-004
gb|DT629526.1|DT629526 EST1156096 Subtracted pine embryo li... 48 6e-004
gb|DT629582.1|DT629582 EST1156152 Subtracted pine embryo li... 48 6e-004
gb|DT629610.1|DT629610 EST1156180 Subtracted pine embryo li... 48 6e-004
gb|DT629634.1|DT629634 EST1156204 Subtracted pine embryo li... 48 6e-004
gb|DT629755.1|DT629755 EST1154167 Subtracted pine embryo li... 48 6e-004
gb|DT629760.1|DT629760 EST1154172 Subtracted pine embryo li... 48 6e-004
gb|DT629762.1|DT629762 EST1154174 Subtracted pine embryo li... 48 6e-004
gb|DT629763.1|DT629763 EST1154175 Subtracted pine embryo li... 48 6e-004
gb|DT629775.1|DT629775 EST1154187 Subtracted pine embryo li... 48 6e-004
gb|DT629776.1|DT629776 EST1154188 Subtracted pine embryo li... 48 6e-004
gb|DT629793.1|DT629793 EST1154205 Subtracted pine embryo li... 48 6e-004
gb|DT629828.1|DT629828 EST1154240 Subtracted pine embryo li... 48 6e-004
gb|DT629838.1|DT629838 EST1154250 Subtracted pine embryo li... 48 6e-004
gb|DT629840.1|DT629840 EST1154252 Subtracted pine embryo li... 48 6e-004
gb|DT629844.1|DT629844 EST1154256 Subtracted pine embryo li... 48 6e-004
gb|DT629859.1|DT629859 EST1154271 Subtracted pine embryo li... 48 6e-004
gb|DT629864.1|DT629864 EST1154276 Subtracted pine embryo li... 48 6e-004
gb|DT629870.1|DT629870 EST1154282 Subtracted pine embryo li... 48 6e-004
gb|DT629871.1|DT629871 EST1154283 Subtracted pine embryo li... 48 6e-004
gb|DT629877.1|DT629877 EST1154289 Subtracted pine embryo li... 48 6e-004
gb|DT629895.1|DT629895 EST1154307 Subtracted pine embryo li... 48 6e-004
gb|DT629912.1|DT629912 EST1154324 Subtracted pine embryo li... 48 6e-004
gb|DT629917.1|DT629917 EST1154329 Subtracted pine embryo li... 48 6e-004
gb|DT629937.1|DT629937 EST1154349 Subtracted pine embryo li... 48 6e-004
gb|DT629946.1|DT629946 EST1154358 Subtracted pine embryo li... 48 6e-004
gb|DT629950.1|DT629950 EST1154362 Subtracted pine embryo li... 48 6e-004
gb|DT629971.1|DT629971 EST1154383 Subtracted pine embryo li... 48 6e-004
gb|DT629988.1|DT629988 EST1154400 Subtracted pine embryo li... 48 6e-004
gb|DT630005.1|DT630005 EST1154417 Subtracted pine embryo li... 48 6e-004
gb|DT630008.1|DT630008 EST1154420 Subtracted pine embryo li... 48 6e-004
gb|DT630010.1|DT630010 EST1154422 Subtracted pine embryo li... 48 6e-004
gb|DT630015.1|DT630015 EST1154427 Subtracted pine embryo li... 48 6e-004
gb|DT630016.1|DT630016 EST1154428 Subtracted pine embryo li... 48 6e-004
gb|DT630017.1|DT630017 EST1154429 Subtracted pine embryo li... 48 6e-004
gb|DT630022.1|DT630022 EST1154434 Subtracted pine embryo li... 48 6e-004
gb|DT630026.1|DT630026 EST1154438 Subtracted pine embryo li... 48 6e-004
gb|DT630032.1|DT630032 EST1154444 Subtracted pine embryo li... 48 6e-004
gb|DT630042.1|DT630042 EST1154454 Subtracted pine embryo li... 48 6e-004
gb|DT630043.1|DT630043 EST1154455 Subtracted pine embryo li... 48 6e-004
gb|DT630052.1|DT630052 EST1154464 Subtracted pine embryo li... 48 6e-004
gb|DT630054.1|DT630054 EST1154466 Subtracted pine embryo li... 48 6e-004
gb|DT630060.1|DT630060 EST1154472 Subtracted pine embryo li... 48 6e-004
gb|DT630070.1|DT630070 EST1154482 Subtracted pine embryo li... 48 6e-004
gb|DT630077.1|DT630077 EST1154489 Subtracted pine embryo li... 48 6e-004
gb|DT630078.1|DT630078 EST1154490 Subtracted pine embryo li... 48 6e-004
gb|DT630081.1|DT630081 EST1154493 Subtracted pine embryo li... 48 6e-004
gb|DT630086.1|DT630086 EST1154498 Subtracted pine embryo li... 48 6e-004
gb|DT630096.1|DT630096 EST1154508 Subtracted pine embryo li... 48 6e-004
gb|DT630098.1|DT630098 EST1154510 Subtracted pine embryo li... 48 6e-004
gb|DT630113.1|DT630113 EST1154525 Subtracted pine embryo li... 48 6e-004
gb|DT630122.1|DT630122 EST1154534 Subtracted pine embryo li... 48 6e-004
gb|DT630143.1|DT630143 EST1154555 Subtracted pine embryo li... 48 6e-004
gb|DT630154.1|DT630154 EST1154566 Subtracted pine embryo li... 48 6e-004
gb|DT630159.1|DT630159 EST1154571 Subtracted pine embryo li... 48 6e-004
gb|DT630166.1|DT630166 EST1154578 Subtracted pine embryo li... 48 6e-004
gb|DT630170.1|DT630170 EST1154582 Subtracted pine embryo li... 48 6e-004
gb|DT630180.1|DT630180 EST1154592 Subtracted pine embryo li... 48 6e-004
gb|DT630181.1|DT630181 EST1154593 Subtracted pine embryo li... 48 6e-004
gb|DT630183.1|DT630183 EST1154595 Subtracted pine embryo li... 48 6e-004
gb|DT630188.1|DT630188 EST1154600 Subtracted pine embryo li... 48 6e-004
gb|DT630197.1|DT630197 EST1154609 Subtracted pine embryo li... 48 6e-004
gb|DT630199.1|DT630199 EST1154611 Subtracted pine embryo li... 48 6e-004
gb|DT630223.1|DT630223 EST1154635 Subtracted pine embryo li... 48 6e-004
gb|DT630230.1|DT630230 EST1154642 Subtracted pine embryo li... 48 6e-004
gb|DT630241.1|DT630241 EST1154653 Subtracted pine embryo li... 48 6e-004
gb|DT630245.1|DT630245 EST1154657 Subtracted pine embryo li... 48 6e-004
gb|DT630247.1|DT630247 EST1154659 Subtracted pine embryo li... 48 6e-004
gb|DT630249.1|DT630249 EST1154661 Subtracted pine embryo li... 48 6e-004
gb|DT630256.1|DT630256 EST1154668 Subtracted pine embryo li... 48 6e-004
gb|DT630278.1|DT630278 EST1154690 Subtracted pine embryo li... 48 6e-004
gb|DT630295.1|DT630295 EST1154707 Subtracted pine embryo li... 48 6e-004
gb|DT630314.1|DT630314 EST1154726 Subtracted pine embryo li... 48 6e-004
gb|DT630319.1|DT630319 EST1154731 Subtracted pine embryo li... 48 6e-004
gb|DT630324.1|DT630324 EST1154736 Subtracted pine embryo li... 48 6e-004
gb|DT630343.1|DT630343 EST1154755 Subtracted pine embryo li... 48 6e-004
gb|DT630347.1|DT630347 EST1154759 Subtracted pine embryo li... 48 6e-004
gb|DT630357.1|DT630357 EST1154769 Subtracted pine embryo li... 48 6e-004
gb|DT630362.1|DT630362 EST1154774 Subtracted pine embryo li... 48 6e-004
gb|DT630369.1|DT630369 EST1154781 Subtracted pine embryo li... 48 6e-004
gb|DT630378.1|DT630378 EST1154790 Subtracted pine embryo li... 48 6e-004
gb|DT630380.1|DT630380 EST1154792 Subtracted pine embryo li... 48 6e-004
gb|DT630382.1|DT630382 EST1154794 Subtracted pine embryo li... 48 6e-004
gb|DT630383.1|DT630383 EST1154795 Subtracted pine embryo li... 48 6e-004
gb|DT630391.1|DT630391 EST1154803 Subtracted pine embryo li... 48 6e-004
gb|DT630403.1|DT630403 EST1154815 Subtracted pine embryo li... 48 6e-004
gb|DT630410.1|DT630410 EST1154822 Subtracted pine embryo li... 48 6e-004
gb|DT630433.1|DT630433 EST1154845 Subtracted pine embryo li... 48 6e-004
gb|DT630448.1|DT630448 EST1154860 Subtracted pine embryo li... 48 6e-004
gb|DT630458.1|DT630458 EST1154870 Subtracted pine embryo li... 48 6e-004
gb|DT630462.1|DT630462 EST1154874 Subtracted pine embryo li... 48 6e-004
gb|DT630472.1|DT630472 EST1154884 Subtracted pine embryo li... 48 6e-004
gb|DT630481.1|DT630481 EST1154893 Subtracted pine embryo li... 48 6e-004
gb|DT630486.1|DT630486 EST1154898 Subtracted pine embryo li... 48 6e-004
gb|DT630489.1|DT630489 EST1154901 Subtracted pine embryo li... 48 6e-004
gb|DT630505.1|DT630505 EST1154917 Subtracted pine embryo li... 48 6e-004
gb|DT630515.1|DT630515 EST1154927 Subtracted pine embryo li... 48 6e-004
gb|DT630521.1|DT630521 EST1154933 Subtracted pine embryo li... 48 6e-004
gb|DT630537.1|DT630537 EST1154949 Subtracted pine embryo li... 48 6e-004
gb|DT630545.1|DT630545 EST1154957 Subtracted pine embryo li... 48 6e-004
gb|DT630547.1|DT630547 EST1154959 Subtracted pine embryo li... 48 6e-004
gb|DT630552.1|DT630552 EST1154964 Subtracted pine embryo li... 48 6e-004
gb|DT630559.1|DT630559 EST1154971 Subtracted pine embryo li... 48 6e-004
gb|DT630569.1|DT630569 EST1154981 Subtracted pine embryo li... 48 6e-004
gb|DT630575.1|DT630575 EST1154987 Subtracted pine embryo li... 48 6e-004
gb|DT630587.1|DT630587 EST1154999 Subtracted pine embryo li... 48 6e-004
gb|DT630597.1|DT630597 EST1155009 Subtracted pine embryo li... 48 6e-004
gb|DT630609.1|DT630609 EST1155021 Subtracted pine embryo li... 48 6e-004
gb|DT630615.1|DT630615 EST1155027 Subtracted pine embryo li... 48 6e-004
gb|DT630617.1|DT630617 EST1155029 Subtracted pine embryo li... 48 6e-004
gb|DT630636.1|DT630636 EST1155048 Subtracted pine embryo li... 48 6e-004
gb|DT630677.1|DT630677 EST1155089 Subtracted pine embryo li... 48 6e-004
gb|DT630685.1|DT630685 EST1155097 Subtracted pine embryo li... 48 6e-004
gb|DT630691.1|DT630691 EST1155103 Subtracted pine embryo li... 48 6e-004
gb|DT630693.1|DT630693 EST1155105 Subtracted pine embryo li... 48 6e-004
gb|DT630698.1|DT630698 EST1155110 Subtracted pine embryo li... 48 6e-004
gb|DT630703.1|DT630703 EST1155115 Subtracted pine embryo li... 48 6e-004
gb|DT630732.1|DT630732 EST1155144 Subtracted pine embryo li... 48 6e-004
gb|DT630733.1|DT630733 EST1155145 Subtracted pine embryo li... 48 6e-004
gb|DT630757.1|DT630757 EST1155169 Subtracted pine embryo li... 48 6e-004
gb|DT630765.1|DT630765 EST1155177 Subtracted pine embryo li... 48 6e-004
gb|DT630767.1|DT630767 EST1155179 Subtracted pine embryo li... 48 6e-004
gb|DT630772.1|DT630772 EST1155184 Subtracted pine embryo li... 48 6e-004
gb|BF777917.1|BF777917 NXSI_078_F03_F NXSI (Nsf Xylem Side ... 46 0.002
gb|BG275322.1|BG275322 NXSI_142_C03_F NXSI (Nsf Xylem Side ... 46 0.002
gb|BQ197456.1|BQ197456 NXLV114_F05_F NXLV (Nsf Xylem Late w... 46 0.002
gb|CD017451.1|CD017451 NXCI_117_G01_F NXCI (Nsf Xylem Compr... 46 0.002
gb|CD025072.1|CD025072 NXSI_005_H07_F NXSI (Nsf Xylem Side ... 46 0.002
gb|CD026310.1|CD026310 NXSI_143_C05_F NXSI (Nsf Xylem Side ... 46 0.002
gb|DN609150.1|DN609150 EST962200 Subtracted pine embryo lib... 46 0.002
gb|DN610745.1|DN610745 EST963795 Subtracted pine embryo lib... 46 0.002
gb|DN610777.1|DN610777 EST963827 Subtracted pine embryo lib... 46 0.002
gb|DN613375.1|DN613375 EST966425 Subtracted pine embryo lib... 46 0.002
gb|DN613626.1|DN613626 EST966676 Subtracted pine embryo lib... 46 0.002
gb|DN614123.1|DN614123 EST967173 Subtracted pine embryo lib... 46 0.002
gb|DN615060.1|DN615060 EST968110 Subtracted pine embryo lib... 46 0.002
gb|DT627562.1|DT627562 EST1156311 Subtracted pine embryo li... 46 0.002
gb|DT627917.1|DT627917 EST1156666 Subtracted pine embryo li... 46 0.002
gb|DT627974.1|DT627974 EST1156723 Subtracted pine embryo li... 46 0.002
gb|DT627988.1|DT627988 EST1156737 Subtracted pine embryo li... 46 0.002
gb|DT628022.1|DT628022 EST1156771 Subtracted pine embryo li... 46 0.002
gb|DT628123.1|DT628123 EST1156872 Subtracted pine embryo li... 46 0.002
gb|DT628175.1|DT628175 EST1156924 Subtracted pine embryo li... 46 0.002
gb|DT629147.1|DT629147 EST1155717 Subtracted pine embryo li... 46 0.002
gb|DT629391.1|DT629391 EST1155961 Subtracted pine embryo li... 46 0.002
gb|DT629470.1|DT629470 EST1156040 Subtracted pine embryo li... 46 0.002
gb|DT629489.1|DT629489 EST1156059 Subtracted pine embryo li... 46 0.002
gb|DT629497.1|DT629497 EST1156067 Subtracted pine embryo li... 46 0.002
gb|DT629759.1|DT629759 EST1154171 Subtracted pine embryo li... 46 0.002
gb|DT629777.1|DT629777 EST1154189 Subtracted pine embryo li... 46 0.002
gb|DT629803.1|DT629803 EST1154215 Subtracted pine embryo li... 46 0.002
gb|DT629814.1|DT629814 EST1154226 Subtracted pine embryo li... 46 0.002
gb|DT629822.1|DT629822 EST1154234 Subtracted pine embryo li... 46 0.002
gb|DT629853.1|DT629853 EST1154265 Subtracted pine embryo li... 46 0.002
gb|DT629863.1|DT629863 EST1154275 Subtracted pine embryo li... 46 0.002
gb|DT629875.1|DT629875 EST1154287 Subtracted pine embryo li... 46 0.002
gb|DT629882.1|DT629882 EST1154294 Subtracted pine embryo li... 46 0.002
gb|DT629928.1|DT629928 EST1154340 Subtracted pine embryo li... 46 0.002
gb|DT629962.1|DT629962 EST1154374 Subtracted pine embryo li... 46 0.002
gb|DT629976.1|DT629976 EST1154388 Subtracted pine embryo li... 46 0.002
gb|DT630001.1|DT630001 EST1154413 Subtracted pine embryo li... 46 0.002
gb|DT630007.1|DT630007 EST1154419 Subtracted pine embryo li... 46 0.002
gb|DT630029.1|DT630029 EST1154441 Subtracted pine embryo li... 46 0.002
gb|DT630034.1|DT630034 EST1154446 Subtracted pine embryo li... 46 0.002
gb|DT630037.1|DT630037 EST1154449 Subtracted pine embryo li... 46 0.002
gb|DT630046.1|DT630046 EST1154458 Subtracted pine embryo li... 46 0.002
gb|DT630062.1|DT630062 EST1154474 Subtracted pine embryo li... 46 0.002
gb|DT630074.1|DT630074 EST1154486 Subtracted pine embryo li... 46 0.002
gb|DT630088.1|DT630088 EST1154500 Subtracted pine embryo li... 46 0.002
gb|DT630092.1|DT630092 EST1154504 Subtracted pine embryo li... 46 0.002
gb|DT630095.1|DT630095 EST1154507 Subtracted pine embryo li... 46 0.002
gb|DT630099.1|DT630099 EST1154511 Subtracted pine embryo li... 46 0.002
gb|DT630129.1|DT630129 EST1154541 Subtracted pine embryo li... 46 0.002
gb|DT630149.1|DT630149 EST1154561 Subtracted pine embryo li... 46 0.002
gb|DT630169.1|DT630169 EST1154581 Subtracted pine embryo li... 46 0.002
gb|DT630185.1|DT630185 EST1154597 Subtracted pine embryo li... 46 0.002
gb|DT630194.1|DT630194 EST1154606 Subtracted pine embryo li... 46 0.002
gb|DT630216.1|DT630216 EST1154628 Subtracted pine embryo li... 46 0.002
gb|DT630227.1|DT630227 EST1154639 Subtracted pine embryo li... 46 0.002
gb|DT630258.1|DT630258 EST1154670 Subtracted pine embryo li... 46 0.002
gb|DT630268.1|DT630268 EST1154680 Subtracted pine embryo li... 46 0.002
gb|DT630270.1|DT630270 EST1154682 Subtracted pine embryo li... 46 0.002
gb|DT630271.1|DT630271 EST1154683 Subtracted pine embryo li... 46 0.002
gb|DT630310.1|DT630310 EST1154722 Subtracted pine embryo li... 46 0.002
gb|DT630326.1|DT630326 EST1154738 Subtracted pine embryo li... 46 0.002
gb|DT630365.1|DT630365 EST1154777 Subtracted pine embryo li... 46 0.002
gb|DT630376.1|DT630376 EST1154788 Subtracted pine embryo li... 46 0.002
gb|DT630396.1|DT630396 EST1154808 Subtracted pine embryo li... 46 0.002
gb|DT630400.1|DT630400 EST1154812 Subtracted pine embryo li... 46 0.002
gb|DT630402.1|DT630402 EST1154814 Subtracted pine embryo li... 46 0.002
gb|DT630409.1|DT630409 EST1154821 Subtracted pine embryo li... 46 0.002
gb|DT630419.1|DT630419 EST1154831 Subtracted pine embryo li... 46 0.002
gb|DT630453.1|DT630453 EST1154865 Subtracted pine embryo li... 46 0.002
gb|DT630471.1|DT630471 EST1154883 Subtracted pine embryo li... 46 0.002
gb|DT630502.1|DT630502 EST1154914 Subtracted pine embryo li... 46 0.002
gb|DT630507.1|DT630507 EST1154919 Subtracted pine embryo li... 46 0.002
gb|DT630511.1|DT630511 EST1154923 Subtracted pine embryo li... 46 0.002
gb|DT630531.1|DT630531 EST1154943 Subtracted pine embryo li... 46 0.002
gb|DT630544.1|DT630544 EST1154956 Subtracted pine embryo li... 46 0.002
gb|DT630555.1|DT630555 EST1154967 Subtracted pine embryo li... 46 0.002
gb|DT630556.1|DT630556 EST1154968 Subtracted pine embryo li... 46 0.002
gb|DT630572.1|DT630572 EST1154984 Subtracted pine embryo li... 46 0.002
gb|DT630611.1|DT630611 EST1155023 Subtracted pine embryo li... 46 0.002
gb|DT630622.1|DT630622 EST1155034 Subtracted pine embryo li... 46 0.002
gb|DT630625.1|DT630625 EST1155037 Subtracted pine embryo li... 46 0.002
gb|DT630631.1|DT630631 EST1155043 Subtracted pine embryo li... 46 0.002
gb|DT630664.1|DT630664 EST1155076 Subtracted pine embryo li... 46 0.002
gb|DT630710.1|DT630710 EST1155122 Subtracted pine embryo li... 46 0.002
gb|DT630712.1|DT630712 EST1155124 Subtracted pine embryo li... 46 0.002
gb|CD025305.1|CD025305 NXSI_040_E02_F NXSI (Nsf Xylem Side ... 44 0.009
gb|CD028517.1|CD028517 NXSI_119_H05_F NXSI (Nsf Xylem Side ... 44 0.009
gb|CN852425.1|CN852425 H21 Healthy pine stem suppression su... 44 0.009
gb|DN609385.1|DN609385 EST962435 Subtracted pine embryo lib... 44 0.009
gb|DN609626.1|DN609626 EST962676 Subtracted pine embryo lib... 44 0.009
gb|DN611845.1|DN611845 EST964895 Subtracted pine embryo lib... 44 0.009
gb|DN614865.1|DN614865 EST967915 Subtracted pine embryo lib... 44 0.009
gb|DT627797.1|DT627797 EST1156546 Subtracted pine embryo li... 44 0.009
gb|DT628117.1|DT628117 EST1156866 Subtracted pine embryo li... 44 0.009
gb|DT629868.1|DT629868 EST1154280 Subtracted pine embryo li... 44 0.009
gb|DT629876.1|DT629876 EST1154288 Subtracted pine embryo li... 44 0.009
gb|DT629939.1|DT629939 EST1154351 Subtracted pine embryo li... 44 0.009
gb|DT629964.1|DT629964 EST1154376 Subtracted pine embryo li... 44 0.009
gb|DT630009.1|DT630009 EST1154421 Subtracted pine embryo li... 44 0.009
gb|DT630148.1|DT630148 EST1154560 Subtracted pine embryo li... 44 0.009
gb|DT630465.1|DT630465 EST1154877 Subtracted pine embryo li... 44 0.009
gb|DT630470.1|DT630470 EST1154882 Subtracted pine embryo li... 44 0.009
gb|AW290696.1|AW290696 NXNV045E03F Nsf Xylem Normal wood Ve... 42 0.034
gb|BX255051.1|BX255051 BX255051 Pinus pinaster differenciat... 42 0.034
gb|CD027358.1|CD027358 NXNV045E03 Nsf Xylem Normal wood Ver... 42 0.034
gb|BX682866.1|BX682866 BX682866 Pinus pinaster differenciat... 42 0.034
gb|DN609086.1|DN609086 EST962136 Subtracted pine embryo lib... 42 0.034
gb|DN611699.1|DN611699 EST964749 Subtracted pine embryo lib... 42 0.034
gb|DN613794.1|DN613794 EST966844 Subtracted pine embryo lib... 42 0.034
gb|DT629925.1|DT629925 EST1154337 Subtracted pine embryo li... 42 0.034
gb|DT630405.1|DT630405 EST1154817 Subtracted pine embryo li... 42 0.034
gb|DT630523.1|DT630523 EST1154935 Subtracted pine embryo li... 42 0.034
gb|CR393966.1|CR393966 CR393966 RN Pinus pinaster cDNA clon... 40 0.14
gb|DN608758.1|DN608758 EST961808 Subtracted pine embryo lib... 40 0.14
gb|DN609721.1|DN609721 EST962771 Subtracted pine embryo lib... 40 0.14
gb|DN611746.1|DN611746 EST964796 Subtracted pine embryo lib... 40 0.14
gb|DN611914.1|DN611914 EST964964 Subtracted pine embryo lib... 40 0.14
gb|DN612737.1|DN612737 EST965787 Subtracted pine embryo lib... 40 0.14
gb|DN613265.1|DN613265 EST966315 Subtracted pine embryo lib... 40 0.14
gb|DN614135.1|DN614135 EST967185 Subtracted pine embryo lib... 40 0.14
gb|DN614470.1|DN614470 EST967520 Subtracted pine embryo lib... 40 0.14
gb|DN614515.1|DN614515 EST967565 Subtracted pine embryo lib... 40 0.14
gb|DN615575.1|DN615575 EST968625 Subtracted pine embryo lib... 40 0.14
gb|DN615687.1|DN615687 EST968737 Subtracted pine embryo lib... 40 0.14
gb|DN627075.1|DN627075 EST977891 Subtracted pine embryo lib... 40 0.14
gb|DN627125.1|DN627125 EST977941 Subtracted pine embryo lib... 40 0.14
gb|DN627382.1|DN627382 EST978198 Subtracted pine embryo lib... 40 0.14
gb|DN627887.1|DN627887 EST978703 Subtracted pine embryo lib... 40 0.14
gb|DN633148.1|DN633148 EST983964 Subtracted pine embryo lib... 40 0.14
gb|DT627846.1|DT627846 EST1156595 Subtracted pine embryo li... 40 0.14
gb|DT629612.1|DT629612 EST1156182 Subtracted pine embryo li... 40 0.14
gb|DT629767.1|DT629767 EST1154179 Subtracted pine embryo li... 40 0.14
gb|DT629786.1|DT629786 EST1154198 Subtracted pine embryo li... 40 0.14
gb|DT629794.1|DT629794 EST1154206 Subtracted pine embryo li... 40 0.14
gb|DT630102.1|DT630102 EST1154514 Subtracted pine embryo li... 40 0.14
gb|DT630205.1|DT630205 EST1154617 Subtracted pine embryo li... 40 0.14
gb|DT630246.1|DT630246 EST1154658 Subtracted pine embryo li... 40 0.14
gb|DT630339.1|DT630339 EST1154751 Subtracted pine embryo li... 40 0.14
gb|DT630355.1|DT630355 EST1154767 Subtracted pine embryo li... 40 0.14
gb|DT630395.1|DT630395 EST1154807 Subtracted pine embryo li... 40 0.14
gb|DT630429.1|DT630429 EST1154841 Subtracted pine embryo li... 40 0.14
gb|DT630436.1|DT630436 EST1154848 Subtracted pine embryo li... 40 0.14
gb|DT630542.1|DT630542 EST1154954 Subtracted pine embryo li... 40 0.14
gb|DT630724.1|DT630724 EST1155136 Subtracted pine embryo li... 40 0.14
>gb|AL750317.1|AL750317 AL750317 RN Pinus pinaster cDNA clone RN01A10 similar to RP L34,
mRNA sequence
Length = 417
Score = 83.8 bits (42), Expect = 1e-014
Identities = 147/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || |||
Sbjct: 253 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaacg 194
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 193 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 134
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 133 gtctttaaaaccctggtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 74
Query: 681 ag 682
||
Sbjct: 73 ag 72
Score = 42.1 bits (21), Expect = 0.034
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| || ||||||||||||||||| ||||| ||||
Sbjct: 382 ttcaaaactttcttgacaatcttctgttcttctacca 346
>gb|BX249526.1|BX249526 BX249526 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP025A12 similar to 60S RIBOSOMAL PROTEIN
L34, mRNA sequence
Length = 676
Score = 83.8 bits (42), Expect = 1e-014
Identities = 147/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || |||
Sbjct: 288 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaacg 229
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 228 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 169
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 168 gtctttaaaaccctggtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 109
Query: 681 ag 682
||
Sbjct: 108 ag 107
Score = 42.1 bits (21), Expect = 0.034
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| || ||||||||||||||||| ||||| ||||
Sbjct: 417 ttcaaaactttcttgacaatcttctgttcttctacca 381
>gb|BX250231.1|BX250231 BX250231 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP034A07 similar to 60S RIBOSOMAL PROTEIN
L34, mRNA sequence
Length = 619
Score = 83.8 bits (42), Expect = 1e-014
Identities = 147/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || |||
Sbjct: 257 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaacg 198
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 197 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 138
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 137 gtctttaaaaccctggtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 78
Query: 681 ag 682
||
Sbjct: 77 ag 76
Score = 42.1 bits (21), Expect = 0.034
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| || ||||||||||||||||| ||||| ||||
Sbjct: 386 ttcaaaactttcttgacaatcttctgttcttctacca 350
>gb|BX252257.1|BX252257 BX252257 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP062A06 similar to 60S RIBOSOMAL PROTEIN
L34, mRNA sequence
Length = 694
Score = 83.8 bits (42), Expect = 1e-014
Identities = 147/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || |||
Sbjct: 354 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaacg 295
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 294 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 235
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 234 gtctttaaaaccctggtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 175
Query: 681 ag 682
||
Sbjct: 174 ag 173
Score = 42.1 bits (21), Expect = 0.034
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| || ||||||||||||||||| ||||| ||||
Sbjct: 483 ttcaaaactttcttgacaatcttctgttcttctacca 447
>gb|BX252258.1|BX252258 BX252258 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP062A07 similar to 60S RIBOSOMAL PROTEIN
L34, mRNA sequence
Length = 702
Score = 83.8 bits (42), Expect = 1e-014
Identities = 147/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || |||
Sbjct: 354 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaacg 295
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 294 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 235
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 234 gtctttaaaaccctggtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 175
Query: 681 ag 682
||
Sbjct: 174 ag 173
Score = 42.1 bits (21), Expect = 0.034
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| || ||||||||||||||||| ||||| ||||
Sbjct: 483 ttcaaaactttcttgacaatcttctgttcttctacca 447
>gb|BX253440.1|BX253440 BX253440 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP083E07 similar to 60S RIBOSOMAL PROTEIN
L34, mRNA sequence
Length = 620
Score = 83.8 bits (42), Expect = 1e-014
Identities = 147/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || |||
Sbjct: 257 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaacg 198
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 197 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 138
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 137 gtctttaaaaccctggtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 78
Query: 681 ag 682
||
Sbjct: 77 ag 76
Score = 42.1 bits (21), Expect = 0.034
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| || ||||||||||||||||| ||||| ||||
Sbjct: 386 ttcaaaactttcttgacaatcttctgttcttctacca 350
>gb|BX676882.1|BX676882 BX676882 RN Pinus pinaster cDNA clone RN13D08, mRNA sequence
Length = 420
Score = 83.8 bits (42), Expect = 1e-014
Identities = 147/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || |||
Sbjct: 303 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaacg 244
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 243 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 184
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 183 gtctttaaaaccctggtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 124
Query: 681 ag 682
||
Sbjct: 123 ag 122
>gb|BX682720.1|BX682720 BX682720 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 120F02 similar to 60S ribosomal protein L34,
mRNA sequence
Length = 553
Score = 83.8 bits (42), Expect = 1e-014
Identities = 147/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || |||
Sbjct: 252 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaacg 193
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 192 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 133
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 132 gtctttaaaaccctggtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 73
Query: 681 ag 682
||
Sbjct: 72 ag 71
Score = 42.1 bits (21), Expect = 0.034
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| || ||||||||||||||||| ||||| ||||
Sbjct: 381 ttcaaaactttcttgacaatcttctgttcttctacca 345
>gb|CR392712.1|CR392712 CR392712 RN Pinus pinaster cDNA clone RN37A04, mRNA sequence
Length = 300
Score = 83.8 bits (42), Expect = 1e-014
Identities = 147/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || |||
Sbjct: 251 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaacg 192
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 191 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 132
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 131 gtctttaaaaccctggtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 72
Query: 681 ag 682
||
Sbjct: 71 ag 70
>gb|AW042692.1|AW042692 ST23D06 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST23D06, mRNA sequence
Length = 596
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 311 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 252
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 251 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 192
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 191 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 132
Query: 681 ag 682
||
Sbjct: 131 ag 130
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 440 ttcaaaaccttcttgacaatcttctgttcttctacca 404
>gb|AW290179.1|AW290179 NXNV015A05F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV015A05 5', mRNA sequence
Length = 488
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 258 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 199
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 198 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 139
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 138 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 79
Query: 681 ag 682
||
Sbjct: 78 ag 77
Score = 42.1 bits (21), Expect = 0.034
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 380 cttcttgacaatcttctgctcttcaacca 408
|||||||||||||||||| ||||| ||||
Sbjct: 379 cttcttgacaatcttctgttcttctacca 351
>gb|AW982027.1|AW982027 PC23A03 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC23A03, mRNA sequence
Length = 585
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 227 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 168
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 167 ggacatttaggtccactggccctcttcttagcggtctggtatattagcctcccacctgga 108
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 107 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 48
Query: 681 ag 682
||
Sbjct: 47 ag 46
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 356 ttcaaaaccttcttgacaatcttctgttcttctacca 320
>gb|BE496395.1|BE496395 NXCI_017_D01_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_017_D01 5' similar to Arabidopsis
thaliana sequence At1g26880 60s ribosomal protein L34
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 558
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 247 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 188
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 187 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 128
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 127 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 68
Query: 681 ag 682
||
Sbjct: 67 ag 66
>gb|BE496610.1|BE496610 NXCI_021_G01_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_021_G01 5' similar to Arabidopsis
thaliana sequence At1g26880 60s ribosomal protein L34
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 455
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 253 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 194
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 193 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 134
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 133 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 74
Query: 681 ag 682
||
Sbjct: 73 ag 72
>gb|BE643823.1|BE643823 NXCI_047_F11_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_047_F11 5' similar to Arabidopsis
thaliana sequence At1g26880 60s ribosomal protein L34
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 458
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 253 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 194
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 193 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 134
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 133 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 74
Query: 681 ag 682
||
Sbjct: 73 ag 72
>gb|BF010485.1|BF010485 NXCI_084_E08_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_084_E08 5' similar to Arabidopsis
thaliana sequence At1g26880 60s ribosomal protein L34
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 395
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 247 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 188
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 187 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 128
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 127 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 68
Query: 681 ag 682
||
Sbjct: 67 ag 66
Score = 42.1 bits (21), Expect = 0.034
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 380 cttcttgacaatcttctgctcttcaacca 408
|||||||||||||||||| ||||| ||||
Sbjct: 368 cttcttgacaatcttctgttcttctacca 340
>gb|BF518220.1|BF518220 NXSI_036_E04_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_036_E04 5' similar to Arabidopsis thaliana
sequence At1g26880 60s ribosomal protein L34 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 508
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 188 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 129
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 128 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 69
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 68 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 9
Query: 681 ag 682
||
Sbjct: 8 ag 7
Score = 40.1 bits (20), Expect = 0.14
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 381 ttcttgacaatcttctgctcttcaacca 408
||||||||||||||||| ||||| ||||
Sbjct: 308 ttcttgacaatcttctgttcttctacca 281
>gb|BF609105.1|BF609105 NXSI_040_D10_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_040_D10 5' similar to Arabidopsis thaliana
sequence At1g26880 60s ribosomal protein L34 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 523
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 279 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 220
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 219 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 160
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 159 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 100
Query: 681 ag 682
||
Sbjct: 99 ag 98
Score = 44.1 bits (22), Expect = 0.009
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| | |||||||||||||||||| ||||| ||||
Sbjct: 408 ttcaaaancttcttgacaatcttctgttcttctacca 372
>gb|BG040040.1|BG040040 NXSI_105_H03_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_105_H03 5' similar to Arabidopsis thaliana
sequence At1g26880 60s ribosomal protein L34 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 423
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 289 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 230
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 229 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 170
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 169 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 110
Query: 681 ag 682
||
Sbjct: 109 ag 108
>gb|BG040349.1|BG040349 NXSI_107_C07_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_107_C07 5' similar to Arabidopsis thaliana
sequence At1g26880 60s ribosomal protein L34 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 528
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 230 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 171
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 170 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 111
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 110 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 51
Query: 681 ag 682
||
Sbjct: 50 ag 49
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 359 ttcaaaaccttcttgacaatcttctgttcttctacca 323
>gb|BQ697224.1|BQ697224 NXPV_051_A06_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_051_A06 5' similar to Arabidopsis
thaliana sequence At1g26880 60s ribosomal protein L34
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 431
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 212 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 153
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 152 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 93
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 92 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 33
Query: 681 ag 682
||
Sbjct: 32 ag 31
Score = 42.1 bits (21), Expect = 0.034
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 380 cttcttgacaatcttctgctcttcaacca 408
|||||||||||||||||| ||||| ||||
Sbjct: 333 cttcttgacaatcttctgttcttctacca 305
>gb|BQ699020.1|BQ699020 NXRV118_D10_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV118_D10 5' similar to Arabidopsis thaliana
sequence At1g26880 60s ribosomal protein L34 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 567
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 261 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 202
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 201 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 142
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 141 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 82
Query: 681 ag 682
||
Sbjct: 81 ag 80
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 390 ttcaaaaccttcttgacaatcttctgttcttctacca 354
>gb|BQ699236.1|BQ699236 NXRV121_B09_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV121_B09 5' similar to Arabidopsis thaliana
sequence At1g26880 60s ribosomal protein L34 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 568
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 350 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 291
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 290 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 231
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 230 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 171
Query: 681 ag 682
||
Sbjct: 170 ag 169
>gb|BQ700831.1|BQ700831 NXRV112_A06_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV112_A06 5' similar to Arabidopsis thaliana
sequence At1g26880 60s ribosomal protein L34 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 521
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 261 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 202
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 201 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 142
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 141 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 82
Query: 681 ag 682
||
Sbjct: 81 ag 80
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 390 ttcaaaaccttcttgacaatcttctgttcttctacca 354
>gb|CD026825.1|CD026825 NXNV015A05 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV015A05 5' similar to Arabidopsis thaliana sequence
At1g26880 60s ribosomal protein L34 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 488
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 258 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 199
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 198 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 139
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 138 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 79
Query: 681 ag 682
||
Sbjct: 78 ag 77
Score = 42.1 bits (21), Expect = 0.034
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 380 cttcttgacaatcttctgctcttcaacca 408
|||||||||||||||||| ||||| ||||
Sbjct: 379 cttcttgacaatcttctgttcttctacca 351
>gb|CF392690.1|CF392690 RTDR3_5_E02.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_5_E02_A022 5', mRNA
sequence
Length = 500
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 207 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 148
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 147 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 88
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 87 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 28
Query: 681 ag 682
||
Sbjct: 27 ag 26
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 336 ttcaaaaccttcttgacaatcttctgttcttctacca 300
>gb|CF395922.1|CF395922 RTDS2_19_G07.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_19_G07_A021 5', mRNA sequence
Length = 736
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 289 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 230
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 229 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 170
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 169 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 110
Query: 681 ag 682
||
Sbjct: 109 ag 108
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 418 ttcaaaaccttcttgacaatcttctgttcttctacca 382
>gb|CF471664.1|CF471664 RTDS1_6_G10.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_6_G10_A015 3', mRNA sequence
Length = 635
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 305 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 246
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 245 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 186
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 185 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 126
Query: 681 ag 682
||
Sbjct: 125 ag 124
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 434 ttcaaaaccttcttgacaatcttctgttcttctacca 398
>gb|CO165995.1|CO165995 FLD1_58_C11.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_58_C11_A029 5', mRNA sequence
Length = 853
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Plus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 286 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 345
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 346 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 405
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 406 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 465
Query: 681 ag 682
||
Sbjct: 466 ag 467
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 157 ttcaaaaccttcttgacaatcttctgttcttctacca 193
>gb|CO361147.1|CO361147 NDL2_3_C03.b1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_3_C03_A029 3', mRNA sequence
Length = 790
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Plus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 572 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 631
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 632 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 691
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 692 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 751
Query: 681 ag 682
||
Sbjct: 752 ag 753
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 443 ttcaaaaccttcttgacaatcttctgttcttctacca 479
>gb|CV035135.1|CV035135 RTNACL1_13_G07.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_13_G07_A029 5', mRNA sequence
Length = 710
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 269 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 210
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 209 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 150
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 149 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 90
Query: 681 ag 682
||
Sbjct: 89 ag 88
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 398 ttcaaaaccttcttgacaatcttctgttcttctacca 362
>gb|CV036384.1|CV036384 RTNACL1_58_H09.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_58_H09_A029 5', mRNA sequence
Length = 620
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 309 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 250
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 249 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 190
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 189 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 130
Query: 681 ag 682
||
Sbjct: 129 ag 128
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 438 ttcaaaaccttcttgacaatcttctgttcttctacca 402
>gb|CX646462.1|CX646462 COLD1_9_B07.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_9_B07_A029 5', mRNA sequence
Length = 822
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 299 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 240
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 239 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 180
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 179 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 120
Query: 681 ag 682
||
Sbjct: 119 ag 118
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 428 ttcaaaaccttcttgacaatcttctgttcttctacca 392
>gb|CX648845.1|CX648845 COLD1_31_G04.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_31_G04_A029 3', mRNA sequence
Length = 659
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 225 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 166
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 165 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 106
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 105 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 46
Query: 681 ag 682
||
Sbjct: 45 ag 44
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 354 ttcaaaaccttcttgacaatcttctgttcttctacca 318
>gb|CX648922.1|CX648922 COLD1_31_G04.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_31_G04_A029 5', mRNA sequence
Length = 524
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 301 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 242
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 241 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 182
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 181 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 122
Query: 681 ag 682
||
Sbjct: 121 ag 120
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 430 ttcaaaaccttcttgacaatcttctgttcttctacca 394
>gb|CX651289.1|CX651289 COLD1_51_H09.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_51_H09_A029 3', mRNA sequence
Length = 699
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 267 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 208
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 207 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 148
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 147 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 88
Query: 681 ag 682
||
Sbjct: 87 ag 86
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 396 ttcaaaaccttcttgacaatcttctgttcttctacca 360
>gb|CX651369.1|CX651369 COLD1_51_H09.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_51_H09_A029 5', mRNA sequence
Length = 604
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 254 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 195
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 194 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 135
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 134 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 75
Query: 681 ag 682
||
Sbjct: 74 ag 73
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 383 ttcaaaaccttcttgacaatcttctgttcttctacca 347
>gb|CX715540.1|CX715540 RTPQ1_34_G10.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_34_G10_A032 5', mRNA sequence
Length = 596
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 275 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 216
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 215 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 156
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 155 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 96
Query: 681 ag 682
||
Sbjct: 95 ag 94
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 404 ttcaaaaccttcttgacaatcttctgttcttctacca 368
>gb|DR088564.1|DR088564 RTAL1_2_F09.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_2_F09_A029 5', mRNA sequence
Length = 736
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 312 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 253
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 252 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 193
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 192 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 133
Query: 681 ag 682
||
Sbjct: 132 ag 131
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 441 ttcaaaaccttcttgacaatcttctgttcttctacca 405
>gb|DR167170.1|DR167170 RTPHOS1_17_D09.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_17_D09_A029 3', mRNA sequence
Length = 650
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Plus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 338 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 397
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 398 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 457
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 458 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 517
Query: 681 ag 682
||
Sbjct: 518 ag 519
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 209 ttcaaaaccttcttgacaatcttctgttcttctacca 245
>gb|DR744690.1|DR744690 RTCU1_24_E12.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_24_E12_A029 3', mRNA sequence
Length = 550
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 211 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 152
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 151 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 92
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 91 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 32
Query: 681 ag 682
||
Sbjct: 31 ag 30
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 340 ttcaaaaccttcttgacaatcttctgttcttctacca 304
>gb|DR744762.1|DR744762 RTCU1_24_E12.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_24_E12_A029 5', mRNA sequence
Length = 545
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 187 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 128
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 127 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 68
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 67 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 8
Query: 681 ag 682
||
Sbjct: 7 ag 6
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 316 ttcaaaaccttcttgacaatcttctgttcttctacca 280
>gb|DR745218.1|DR745218 RTCU1_27_H05.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_27_H05_A029 5', mRNA sequence
Length = 677
Score = 75.8 bits (38), Expect = 2e-012
Identities = 146/182 (80%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 225 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 166
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 165 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 106
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 105 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 46
Query: 681 ag 682
||
Sbjct: 45 ag 44
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 354 ttcaaaaccttcttgacaatcttctgttcttctacca 318
>gb|BX254650.1|BX254650 BX254650 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP102A06 similar to 60S RIBOSOMAL PROTEIN
L34, mRNA sequence
Length = 455
Score = 73.8 bits (37), Expect = 1e-011
Identities = 76/89 (85%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || |||
Sbjct: 91 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaacg 32
Query: 561 ggacacttgggcccgctggctctcttctt 589
||||| || || || ||||| ||||||||
Sbjct: 31 ggacatttaggtccactggccctcttctt 3
Score = 42.1 bits (21), Expect = 0.034
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| || ||||||||||||||||| ||||| ||||
Sbjct: 220 ttcaaaactttcttgacaatcttctgttcttctacca 184
>gb|CF470303.1|CF470303 RTDS1_18_D01.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_18_D01_A015 5', mRNA sequence
Length = 735
Score = 67.9 bits (34), Expect = 6e-010
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 275 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 216
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || || || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 215 ggacatttaggtccactggccctcttctttgcggtctggtatattagcctcccacctgga 156
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| ||||| || || ||||| ||||||||||| |||||||| || |||
Sbjct: 155 gtctttagaaccctagtctgattagatttcgtcgcatagctgtggcgcttgcgatacgtc 96
Query: 681 ag 682
||
Sbjct: 95 ag 94
Score = 58.0 bits (29), Expect = 6e-007
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||||||||| ||||
Sbjct: 404 ttcaaaaccttcttgacaatcttctgctcttctacca 368
>gb|CF470550.1|CF470550 RTDS1_13_E11.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_13_E11_A015 3', mRNA sequence
Length = 681
Score = 67.9 bits (34), Expect = 6e-010
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 247 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 188
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || | || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 187 ggacatttaagtccactggccctcttctttgcggtctggtatattagcctcccacctgga 128
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 127 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 68
Query: 681 ag 682
||
Sbjct: 67 ag 66
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 376 ttcaaaaccttcttgacaatcttctgttcttctacca 340
>gb|CF470616.1|CF470616 RTDS1_13_E11.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_13_E11_A015 5', mRNA sequence
Length = 742
Score = 67.9 bits (34), Expect = 6e-010
Identities = 145/182 (79%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 290 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 231
Query: 561 ggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggg 620
||||| || | || ||||| |||||||| | | |||||| | ||| | ||||| ||
Sbjct: 230 ggacatttaagtccactggccctcttctttgcggtctggtatattagcctcccacctgga 171
Query: 621 gtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtc 680
||||| | |||| |||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 170 gtctttagaaccctagtctggttagatttcgtcgcatagctgtggcgcttgcgatacgtc 111
Query: 681 ag 682
||
Sbjct: 110 ag 109
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 419 ttcaaaaccttcttgacaatcttctgttcttctacca 383
>gb|AW758637.1|AW758637 NXNV_084_E03_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_084_E03 5' similar to Arabidopsis thaliana
sequence At1g26880 60s ribosomal protein L34 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 300
Score = 65.9 bits (33), Expect = 2e-009
Identities = 75/89 (84%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 159 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 100
Query: 561 ggacacttgggcccgctggctctcttctt 589
||||| || || || ||||| ||||||||
Sbjct: 99 ggacatttaggtccactggccctcttctt 71
>gb|BF777173.1|BF777173 NXSI_066_C03_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_066_C03 5' similar to Arabidopsis thaliana
sequence At1g26880 60s ribosomal protein L34 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 433
Score = 65.9 bits (33), Expect = 2e-009
Identities = 75/89 (84%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 99 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 40
Query: 561 ggacacttgggcccgctggctctcttctt 589
||||| || || || ||||| ||||||||
Sbjct: 39 ggacatttaggtccactggccctcttctt 11
Score = 44.1 bits (22), Expect = 0.009
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| | |||||||||||||||||| ||||| ||||
Sbjct: 228 ttcaaaancttcttgacaatcttctgttcttctacca 192
>gb|BG275457.1|BG275457 NXSI_139_A08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_139_A08 5' similar to Arabidopsis thaliana
sequence At1g26880 60s ribosomal protein L34 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 521
Score = 65.9 bits (33), Expect = 2e-009
Identities = 75/89 (84%)
Strand = Plus / Minus
Query: 501 gaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacg 560
||||| ||||||||||||||||||||||||||||| || ||||| |||| || || ||
Sbjct: 99 gacctcttgtactcagctggcctcagatggggaatcccatggattctcttgcctgtaaca 40
Query: 561 ggacacttgggcccgctggctctcttctt 589
||||| || || || ||||| ||||||||
Sbjct: 39 ggacatttaggtccactggccctcttctt 11
Score = 50.1 bits (25), Expect = 1e-004
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaacca 408
||||| |||||||||||||||||||| ||||| ||||
Sbjct: 228 ttcaaaaccttcttgacaatcttctgttcttctacca 192
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 84,197
Number of Sequences: 355925
Number of extensions: 84197
Number of successful extensions: 25990
Number of sequences better than 0.5: 430
Number of HSP's better than 0.5 without gapping: 429
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 25403
Number of HSP's gapped (non-prelim): 588
length of query: 803
length of database: 217,277,237
effective HSP length: 19
effective length of query: 784
effective length of database: 210,514,662
effective search space: 165043495008
effective search space used: 165043495008
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)