BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2455940.2.2
(1190 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AA556630.1|AA556630 485 Loblolly pine C Pinus taeda cDNA... 60 2e-007
gb|AW290507.1|AW290507 NXNV027G07F Nsf Xylem Normal wood Ve... 60 2e-007
gb|AW736818.1|AW736818 NXNV_083_C12_F Nsf Xylem Normal wood... 60 2e-007
gb|BE657072.1|BE657072 NXCI_042_A10_F NXCI (Nsf Xylem Compr... 60 2e-007
gb|BE997154.1|BE997154 NXCI_104_G08_F NXCI (Nsf Xylem Compr... 60 2e-007
gb|BF186095.1|BF186095 NXCI_132_F03_F NXCI (Nsf Xylem Compr... 60 2e-007
gb|BF186430.1|BF186430 NXCI_137_C10_F NXCI (Nsf Xylem Compr... 60 2e-007
gb|BF517741.1|BF517741 NXSI_029_F10_F NXSI (Nsf Xylem Side ... 60 2e-007
gb|BF778631.1|BF778631 NXSI_088_H06_F NXSI (Nsf Xylem Side ... 60 2e-007
gb|BG275591.1|BG275591 NXSI_143_F07_F NXSI (Nsf Xylem Side ... 60 2e-007
gb|BI202780.1|BI202780 NXPV_090_D06_F NXPV (Nsf Xylem Plani... 60 2e-007
gb|BQ695616.1|BQ695616 NXPV_030_F03_F NXPV (Nsf Xylem Plani... 60 2e-007
gb|CD027166.1|CD027166 NXNV027G07 Nsf Xylem Normal wood Ver... 60 2e-007
gb|CF389766.1|CF389766 RTDR2_5_A09.g1_A021 Loblolly pine ro... 60 2e-007
gb|CF396117.1|CF396117 RTDS2_13_C03.g1_A021 Drought-stresse... 60 2e-007
gb|CF397756.1|CF397756 RTDS3_1_C11.g1_A022 Drought-stressed... 60 2e-007
gb|CF472622.1|CF472622 RTDS1_10_F05.g1_A015 Drought-stresse... 60 2e-007
gb|CF473897.1|CF473897 RTWW2_19_E08.g1_A021 Well-watered lo... 60 2e-007
gb|CF476774.1|CF476774 RTWW3_3_C08.g1_A022 Well-watered lob... 60 2e-007
gb|CF478998.1|CF478998 RTWW3_21_F05.g1_A022 Well-watered lo... 60 2e-007
gb|CO165036.1|CO165036 FLD1_51_H11.g1_A029 Root flooded Pin... 60 2e-007
gb|CO173178.1|CO173178 NDL1_34_B11.g1_A029 Needles control ... 60 2e-007
gb|CO362051.1|CO362051 NDL2_8_G11.g1_A029 Needles control 2... 60 2e-007
gb|CO367832.1|CO367832 RTK1_37_A06.b1_A029 Roots minus pota... 60 2e-007
gb|CO367905.1|CO367905 RTK1_37_A06.g1_A029 Roots minus pota... 60 2e-007
gb|DR047556.1|DR047556 RTBOR1_1_H07.g1_A029 Roots plus adde... 60 2e-007
gb|DR055470.1|DR055470 RTCA1_23_H04.g2_A029 Roots minus cal... 60 2e-007
gb|DR090086.1|DR090086 RTAL1_12_D05.g1_A029 Roots plus adde... 60 2e-007
gb|DR102419.1|DR102419 STRR1_81_A09.b1_A033 Stem Response R... 60 2e-007
dbj|BD224282.1| Materials and methods for the modification ... 60 2e-007
dbj|BD224329.1| Materials and methods for the modification ... 60 2e-007
dbj|BD224370.1| Materials and methods for the modification ... 60 2e-007
dbj|BD272987.1| Materials and methods for the modification ... 60 2e-007
gb|AW736883.1|AW736883 NXNV_080_H05_F Nsf Xylem Normal wood... 56 3e-006
gb|BE452094.1|BE452094 NXCI_009_F05_F NXCI (Nsf Xylem Compr... 56 3e-006
gb|BQ696163.1|BQ696163 NXPV_039_A12_F NXPV (Nsf Xylem Plani... 56 3e-006
gb|CO171218.1|CO171218 NDL1_20_A04.b1_A029 Needles control ... 54 1e-005
gb|AW754548.1|AW754548 PC03E05 Pine TriplEx pollen cone lib... 52 5e-005
gb|AL750465.1|AL750465 AL750465 RN Pinus pinaster cDNA clon... 52 5e-005
gb|BX250520.1|BX250520 BX250520 Pinus pinaster differenciat... 52 5e-005
gb|BX251216.1|BX251216 BX251216 Pinus pinaster differenciat... 52 5e-005
gb|BX251392.1|BX251392 BX251392 Pinus pinaster differenciat... 52 5e-005
gb|BX252395.1|BX252395 BX252395 Pinus pinaster differenciat... 52 5e-005
gb|BX254999.1|BX254999 BX254999 Pinus pinaster differenciat... 52 5e-005
gb|BX255659.1|BX255659 BX255659 Pinus pinaster differenciat... 52 5e-005
gb|BE643871.1|BE643871 NXCI_048_C12_F NXCI (Nsf Xylem Compr... 52 5e-005
gb|BE761828.1|BE761828 NXCI_070_C06_F NXCI (Nsf Xylem Compr... 52 5e-005
gb|BE997149.1|BE997149 NXCI_104_F07_F NXCI (Nsf Xylem Compr... 52 5e-005
gb|BF221142.1|BF221142 NXCI_163_H03_F NXCI (Nsf Xylem Compr... 52 5e-005
gb|BG317811.1|BG317811 NXPV_005_H12_F NXPV (Nsf Xylem Plani... 52 5e-005
gb|BG625850.1|BG625850 NXPV_066_G10_F NXPV (Nsf Xylem Plani... 52 5e-005
gb|BM492669.1|BM492669 NXRV_029_E08_F NXRV (Nsf Xylem Root ... 52 5e-005
gb|BQ291130.1|BQ291130 NXRV056_B06_F NXRV (Nsf Xylem Root w... 52 5e-005
gb|BQ633731.1|BQ633731 NXRV060_A08_F NXRV (Nsf Xylem Root w... 52 5e-005
gb|BQ634193.1|BQ634193 NXRV064_H06_F NXRV (Nsf Xylem Root w... 52 5e-005
gb|BQ655308.1|BQ655308 NXRV092_G03_F NXRV (Nsf Xylem Root w... 52 5e-005
gb|BQ655383.1|BQ655383 NXRV093_F10_F NXRV (Nsf Xylem Root w... 52 5e-005
gb|BQ700032.1|BQ700032 NXRV133_D07_F NXRV (Nsf Xylem Root w... 52 5e-005
gb|BQ700049.1|BQ700049 NXRV134_B05_F NXRV (Nsf Xylem Root w... 52 5e-005
gb|CF395287.1|CF395287 RTDS2_10_H09.g1_A021 Drought-stresse... 52 5e-005
gb|CF471822.1|CF471822 RTDS1_6_C06.g1_A015 Drought-stressed... 52 5e-005
gb|CF471873.1|CF471873 RTDS1_7_F06.b1_A015 Drought-stressed... 52 5e-005
gb|CF471961.1|CF471961 RTDS1_7_F06.g1_A015 Drought-stressed... 52 5e-005
gb|CF478537.1|CF478537 RTWW3_20_E01.g1_A022 Well-watered lo... 52 5e-005
gb|CF669736.1|CF669736 RTCNT1_45_F03.g1_A029 Root control P... 52 5e-005
gb|CR393126.1|CR393126 CR393126 RN Pinus pinaster cDNA clon... 52 5e-005
gb|CO172079.1|CO172079 NDL1_27_B05.b1_A029 Needles control ... 52 5e-005
gb|CO174177.1|CO174177 NDL1_42_G06.b1_A029 Needles control ... 52 5e-005
gb|CO363617.1|CO363617 RTK1_10_G01.g1_A029 Roots minus pota... 52 5e-005
gb|CO364711.1|CO364711 RTK1_21_H02.b1_A029 Roots minus pota... 52 5e-005
gb|CV033261.1|CV033261 RTNACL1_33_H07.b1_A029 Roots plus ad... 52 5e-005
gb|CX645583.1|CX645583 COLD1_3_H04.g1_A029 Root cold Pinus ... 52 5e-005
gb|CX652110.1|CX652110 COLD1_57_B03.b1_A029 Root cold Pinus... 52 5e-005
gb|CX652183.1|CX652183 COLD1_57_B03.g1_A029 Root cold Pinus... 52 5e-005
gb|DR012927.1|DR012927 HEAT1_15_H09.g1_A029 Root at 37 C fo... 52 5e-005
gb|DR016472.1|DR016472 STRS1_10_G09.b1_A034 Shoot tip pitch... 52 5e-005
gb|DR016726.1|DR016726 STRS1_11_G01.g1_A034 Shoot tip pitch... 52 5e-005
gb|DR021463.1|DR021463 STRS1_44_G05.g1_A034 Shoot tip pitch... 52 5e-005
gb|DR048888.1|DR048888 RTBOR1_11_H12.g1_A029 Roots plus add... 52 5e-005
gb|DR049657.1|DR049657 RTBOR1_18_E07.b1_A029 Roots plus add... 52 5e-005
gb|DR051826.1|DR051826 RTBOR1_32_D10.g1_A029 Roots plus add... 52 5e-005
gb|DR054654.1|DR054654 RTCA1_18_E05.g1_A029 Roots minus cal... 52 5e-005
gb|DR057359.1|DR057359 RTNIT1_5_H03.b1_A029 Roots minus nit... 52 5e-005
gb|DR057447.1|DR057447 RTNIT1_5_H03.g1_A029 Roots minus nit... 52 5e-005
gb|DR068624.1|DR068624 RTDK1_1_H08.g1_A029 Roots, dark Pinu... 52 5e-005
gb|DR070835.1|DR070835 RTDK1_15_H11.g1_A029 Roots, dark Pin... 52 5e-005
gb|DR071922.1|DR071922 RTDK1_23_A02.b1_A029 Roots, dark Pin... 52 5e-005
gb|DR092008.1|DR092008 RTAL1_25_B07.g1_A029 Roots plus adde... 52 5e-005
gb|DR094257.1|DR094257 STRR1_13_A09.g1_A033 Stem Response R... 52 5e-005
gb|DR095857.1|DR095857 STRR1_24_C05.b1_A033 Stem Response R... 52 5e-005
gb|DR097044.1|DR097044 STRR1_32_D03.b1_A033 Stem Response R... 52 5e-005
gb|DR179011.1|DR179011 RTMNUT1_15_A04.g1_A029 Roots minus m... 52 5e-005
gb|DR179858.1|DR179858 RTMNUT1_25_A07.b1_A029 Roots minus m... 52 5e-005
gb|DR386565.1|DR386565 RTHG1_16_B12.b1_A029 Roots plus adde... 52 5e-005
gb|DR681816.1|DR681816 EST1071891 Normalized pine embryo li... 52 5e-005
gb|DR691014.1|DR691014 EST1081100 Normalized pine embryo li... 52 5e-005
gb|DR694201.1|DR694201 EST1084292 Normalized pine embryo li... 52 5e-005
gb|DR694204.1|DR694204 EST1084295 Normalized pine embryo li... 52 5e-005
gb|DR742229.1|DR742229 RTCU1_2_D07.g1_A029 Roots plus added... 52 5e-005
gb|AA556638.1|AA556638 493 Loblolly pine C Pinus taeda cDNA... 50 2e-004
gb|BF010976.1|BF010976 NXCI_096_F08_F NXCI (Nsf Xylem Compr... 50 2e-004
gb|BI643799.1|BI643799 NXPV_123_B01_F NXPV (Nsf Xylem Plani... 50 2e-004
gb|BX253301.1|BX253301 BX253301 Pinus pinaster differenciat... 48 8e-004
gb|BF220967.1|BF220967 NXCI_153_C01_F NXCI (Nsf Xylem Compr... 48 8e-004
gb|BQ697489.1|BQ697489 NXPV_054_A12_F NXPV (Nsf Xylem Plani... 48 8e-004
gb|CX715837.1|CX715837 RTPQ1_36_G05.g1_A032 Roots treated w... 48 8e-004
gb|DR055384.1|DR055384 RTCA1_23_H04.b1_A029 Roots minus cal... 48 8e-004
gb|BX250125.1|BX250125 BX250125 Pinus pinaster differenciat... 46 0.003
gb|BX252414.1|BX252414 BX252414 Pinus pinaster differenciat... 46 0.003
gb|BX253860.1|BX253860 BX253860 Pinus pinaster differenciat... 46 0.003
gb|BX254853.1|BX254853 BX254853 Pinus pinaster differenciat... 46 0.003
gb|BE644042.1|BE644042 NXCI_053_H06_F NXCI (Nsf Xylem Compr... 46 0.003
gb|BE656933.1|BE656933 NXCI_058_D03_F NXCI (Nsf Xylem Compr... 46 0.003
gb|BQ197403.1|BQ197403 NXLV113_G08_F NXLV (Nsf Xylem Late w... 46 0.003
gb|CO170687.1|CO170687 NDL1_16_D09.b1_A029 Needles control ... 46 0.003
gb|CO170754.1|CO170754 NDL1_16_D09.g1_A029 Needles control ... 46 0.003
gb|DR017185.1|DR017185 STRS1_14_D01.g1_A034 Shoot tip pitch... 46 0.003
gb|DR020059.1|DR020059 STRS1_34_H04.b1_A034 Shoot tip pitch... 46 0.003
gb|DR095241.1|DR095241 STRR1_19_E12.g1_A033 Stem Response R... 44 0.013
gb|DR685914.1|DR685914 EST1075991 Normalized pine embryo li... 44 0.013
gb|AW289683.1|AW289683 NXNV004H10F Nsf Xylem Normal wood Ve... 42 0.051
gb|BX252088.1|BX252088 BX252088 Pinus pinaster differenciat... 42 0.051
gb|AW758803.1|AW758803 NXNV_090_C05_F Nsf Xylem Normal wood... 42 0.051
gb|BE187176.1|BE187176 NXNV_160_B10_F Nsf Xylem Normal wood... 42 0.051
gb|BE996908.1|BE996908 NXCI_097_E01_F NXCI (Nsf Xylem Compr... 42 0.051
gb|BE996909.1|BE996909 NXCI_097_E02_F NXCI (Nsf Xylem Compr... 42 0.051
gb|BF221093.1|BF221093 NXCI_163_C12_F NXCI (Nsf Xylem Compr... 42 0.051
gb|BQ699842.1|BQ699842 NXRV122_D01_F NXRV (Nsf Xylem Root w... 42 0.051
gb|CD020798.1|CD020798 NXNV_090_A07_F Nsf Xylem Normal wood... 42 0.051
gb|CD028273.1|CD028273 NXNV004H10 Nsf Xylem Normal wood Ver... 42 0.051
gb|CF470308.1|CF470308 RTDS1_18_B05.g1_A015 Drought-stresse... 42 0.051
gb|BX677596.1|BX677596 BX677596 RN Pinus pinaster cDNA clon... 42 0.051
gb|BX678499.1|BX678499 BX678499 RS Pinus pinaster cDNA clon... 42 0.051
gb|BX681654.1|BX681654 BX681654 RS Pinus pinaster cDNA clon... 42 0.051
gb|CR392624.1|CR392624 CR392624 RN Pinus pinaster cDNA clon... 42 0.051
gb|CR393179.1|CR393179 CR393179 RN Pinus pinaster cDNA clon... 42 0.051
gb|CO164960.1|CO164960 FLD1_51_H11.b1_A029 Root flooded Pin... 42 0.051
gb|CO165535.1|CO165535 FLD1_55_E08.b1_A029 Root flooded Pin... 42 0.051
gb|CO165605.1|CO165605 FLD1_55_E08.g1_A029 Root flooded Pin... 42 0.051
gb|CO171539.1|CO171539 NDL1_22_C08.g1_A029 Needles control ... 42 0.051
gb|CO363528.1|CO363528 RTK1_10_G01.b1_A029 Roots minus pota... 42 0.051
gb|CO364800.1|CO364800 RTK1_21_H02.g1_A029 Roots minus pota... 42 0.051
gb|CX645523.1|CX645523 COLD1_3_H04.b1_A029 Root cold Pinus ... 42 0.051
gb|CX651575.1|CX651575 COLD1_53_G11.b1_A029 Root cold Pinus... 42 0.051
gb|DR012852.1|DR012852 HEAT1_15_H09.b1_A029 Root at 37 C fo... 42 0.051
gb|DR016561.1|DR016561 STRS1_10_G09.g1_A034 Shoot tip pitch... 42 0.051
gb|DR016637.1|DR016637 STRS1_11_G01.b1_A034 Shoot tip pitch... 42 0.051
gb|DR020135.1|DR020135 STRS1_34_H04.g1_A034 Shoot tip pitch... 42 0.051
gb|DR047492.1|DR047492 RTBOR1_1_H07.b1_A029 Roots plus adde... 42 0.051
gb|DR048810.1|DR048810 RTBOR1_11_H12.b1_A029 Roots plus add... 42 0.051
gb|DR059769.1|DR059769 RTNIT1_19_D12.g1_A029 Roots minus ni... 42 0.051
gb|DR070758.1|DR070758 RTDK1_15_H11.b1_A029 Roots, dark Pin... 42 0.051
gb|DR095164.1|DR095164 STRR1_19_E12.b1_A033 Stem Response R... 42 0.051
gb|DR095282.1|DR095282 STRR1_20_B04.b1_A033 Stem Response R... 42 0.051
gb|DR095922.1|DR095922 STRR1_24_C05.g1_A033 Stem Response R... 42 0.051
gb|DR179931.1|DR179931 RTMNUT1_25_A07.g1_A029 Roots minus m... 42 0.051
gb|DR742160.1|DR742160 RTCU1_2_D07.b1_A029 Roots plus added... 42 0.051
gb|AF036095.1|AF036095 Pinus taeda caffeoyl-CoA O-methyltra... 42 0.051
gb|AY670330.1| Pinus taeda isolate 16 caffeoyl-CoA O-methyl... 42 0.051
gb|AY670331.1| Pinus taeda isolate 6 caffeoyl-CoA O-methylt... 42 0.051
gb|AY670332.1| Pinus taeda isolate 4 caffeoyl-CoA O-methylt... 42 0.051
gb|AY670333.1| Pinus taeda isolate 26 caffeoyl-CoA O-methyl... 42 0.051
gb|AY670334.1| Pinus taeda isolate 9 caffeoyl-CoA O-methylt... 42 0.051
gb|AY670335.1| Pinus taeda isolate 23 caffeoyl-CoA O-methyl... 42 0.051
gb|AY670336.1| Pinus taeda isolate 14 caffeoyl-CoA O-methyl... 42 0.051
gb|AY670337.1| Pinus taeda isolate 22 caffeoyl-CoA O-methyl... 42 0.051
gb|AY670338.1| Pinus taeda isolate 32 caffeoyl-CoA O-methyl... 42 0.051
gb|AY670339.1| Pinus taeda isolate 18 caffeoyl-CoA O-methyl... 42 0.051
gb|AY670340.1| Pinus taeda isolate 21 caffeoyl-CoA O-methyl... 42 0.051
gb|AY670341.1| Pinus taeda isolate 31 caffeoyl-CoA O-methyl... 42 0.051
gb|AY670342.1| Pinus taeda isolate 5 caffeoyl-CoA O-methylt... 42 0.051
gb|AY670343.1| Pinus taeda isolate 15 caffeoyl-CoA O-methyl... 42 0.051
gb|AY670344.1| Pinus taeda isolate 20 caffeoyl-CoA O-methyl... 42 0.051
gb|AY670345.1| Pinus taeda isolate 12 caffeoyl-CoA O-methyl... 42 0.051
gb|AY670346.1| Pinus taeda isolate 24 caffeoyl-CoA O-methyl... 42 0.051
gb|AY670347.1| Pinus taeda isolate 11 caffeoyl-CoA O-methyl... 42 0.051
gb|AY670348.1| Pinus taeda isolate 7 caffeoyl-CoA O-methylt... 42 0.051
gb|AY670349.1| Pinus taeda isolate 25 caffeoyl-CoA O-methyl... 42 0.051
gb|AY670350.1| Pinus taeda isolate 13 caffeoyl-CoA O-methyl... 42 0.051
gb|AY670351.1| Pinus taeda isolate 30 caffeoyl-CoA O-methyl... 42 0.051
gb|AY670352.1| Pinus taeda isolate 10 caffeoyl-CoA O-methyl... 42 0.051
gb|AY670353.1| Pinus taeda isolate 2 caffeoyl-CoA O-methylt... 42 0.051
gb|AY670354.1| Pinus taeda isolate 3 caffeoyl-CoA O-methylt... 42 0.051
gb|AY670355.1| Pinus taeda isolate 19 caffeoyl-CoA O-methyl... 42 0.051
gb|AY670356.1| Pinus taeda isolate 28 caffeoyl-CoA O-methyl... 42 0.051
gb|AY670357.1| Pinus taeda isolate 1 caffeoyl-CoA O-methylt... 42 0.051
gb|AY670358.1| Pinus taeda isolate 8 caffeoyl-CoA O-methylt... 42 0.051
gb|AY670359.1| Pinus taeda isolate 17 caffeoyl-CoA O-methyl... 42 0.051
gb|AY670360.1| Pinus taeda isolate 29 caffeoyl-CoA O-methyl... 42 0.051
gb|AY670361.1| Pinus taeda isolate 27 caffeoyl-CoA O-methyl... 42 0.051
gb|CD025732.1|CD025732 NXSI_076_F12_F NXSI (Nsf Xylem Side ... 40 0.20
gb|CO198619.1|CO198619 GEO1_15_E04.b1_A029 Root gravitropis... 40 0.20
gb|DN613057.1|DN613057 EST966107 Subtracted pine embryo lib... 40 0.20
gb|DR017108.1|DR017108 STRS1_14_D01.b1_A034 Shoot tip pitch... 40 0.20
gb|DR080960.1|DR080960 RTFEPL1_26_A01.g1_A029 Roots plus ad... 40 0.20
gb|DR096334.1|DR096334 STRR1_27_G09.b1_A033 Stem Response R... 40 0.20
gb|DR096419.1|DR096419 STRR1_27_G09.g1_A033 Stem Response R... 40 0.20
gb|DR745377.1|DR745377 RTCU1_28_H10.g1_A029 Roots plus adde... 40 0.20
gb|DT628778.1|DT628778 EST1155348 Subtracted pine embryo li... 40 0.20
gb|AY874576.1| Pinus taeda isolate FBRC1 caffeoyl-CoA-O-met... 40 0.20
gb|AY874581.1| Pinus taeda isolate FBRC6 caffeoyl-CoA-O-met... 40 0.20
gb|AY874582.1| Pinus taeda isolate FBRC7 caffeoyl-CoA-O-met... 40 0.20
gb|AY874584.1| Pinus taeda isolate FBRC19 caffeoyl-CoA-O-me... 40 0.20
gb|AY874586.1| Pinus taeda isolate FBRC22 caffeoyl-CoA-O-me... 40 0.20
gb|AY874588.1| Pinus taeda isolate FBRC12 caffeoyl-CoA-O-me... 40 0.20
gb|AY874589.1| Pinus taeda isolate FBRC4 caffeoyl-CoA-O-met... 40 0.20
gb|AY874601.1| Pinus taeda isolate FBRC27 caffeoyl-CoA-O-me... 40 0.20
gb|AY874604.1| Pinus taeda isolate FBRC30 caffeoyl-CoA-O-me... 40 0.20
gb|AY874606.1| Pinus taeda isolate FBRC9 caffeoyl-CoA-O-met... 40 0.20
gb|AY874607.1| Pinus taeda isolate FBRC32 caffeoyl-CoA-O-me... 40 0.20
>gb|AA556630.1|AA556630 485 Loblolly pine C Pinus taeda cDNA clone 2C6D, mRNA sequence
Length = 516
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 47 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 106
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 107 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 166
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 167 ccgatgaggg 176
>gb|AW290507.1|AW290507 NXNV027G07F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV027G07 5', mRNA sequence
Length = 518
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 153 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 212
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 213 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 272
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 273 ccgatgaggg 282
>gb|AW736818.1|AW736818 NXNV_083_C12_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_083_C12 5' similar to Arabidopsis thaliana
sequence At4g34050 caffeoyl-CoA O-methyltransferase -
like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 388
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 102 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 161
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 162 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 221
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 222 ccgatgaggg 231
>gb|BE657072.1|BE657072 NXCI_042_A10_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_042_A10 5' similar to Arabidopsis
thaliana sequence At4g34050 caffeoyl-CoA
O-methyltransferase - like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 496
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 153 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 212
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 213 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 272
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 273 ccgatgaggg 282
>gb|BE997154.1|BE997154 NXCI_104_G08_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_104_G08 5' similar to Arabidopsis
thaliana sequence At4g34050 caffeoyl-CoA
O-methyltransferase - like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 411
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 20 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 79
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 80 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 139
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 140 ccgatgaggg 149
>gb|BF186095.1|BF186095 NXCI_132_F03_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_132_F03 5' similar to Arabidopsis
thaliana sequence At4g34050 caffeoyl-CoA
O-methyltransferase - like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 520
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 140 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 199
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 200 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 259
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 260 ccgatgaggg 269
>gb|BF186430.1|BF186430 NXCI_137_C10_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_137_C10 5' similar to Arabidopsis
thaliana sequence At4g34050 caffeoyl-CoA
O-methyltransferase - like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 390
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 182 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 241
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 242 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 301
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 302 ccgatgaggg 311
>gb|BF517741.1|BF517741 NXSI_029_F10_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_029_F10 5' similar to Arabidopsis thaliana
sequence At4g34050 caffeoyl-CoA O-methyltransferase -
like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 504
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 166 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 225
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 226 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 285
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 286 ccgatgaggg 295
>gb|BF778631.1|BF778631 NXSI_088_H06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_088_H06 5' similar to Arabidopsis thaliana
sequence At4g34050 caffeoyl-CoA O-methyltransferase -
like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 430
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 140 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 199
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 200 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 259
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 260 ccgatgaggg 269
>gb|BG275591.1|BG275591 NXSI_143_F07_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_143_F07 5' similar to Arabidopsis thaliana
sequence At4g34050 caffeoyl-CoA O-methyltransferase -
like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 494
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 175 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 234
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 235 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 294
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 295 ccgatgaggg 304
>gb|BI202780.1|BI202780 NXPV_090_D06_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_090_D06 5' similar to Arabidopsis
thaliana sequence At4g34050 caffeoyl-CoA
O-methyltransferase - like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 543
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 178 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 237
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 238 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 297
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 298 ccgatgaggg 307
>gb|BQ695616.1|BQ695616 NXPV_030_F03_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_030_F03 5' similar to Arabidopsis
thaliana sequence At4g34050 caffeoyl-CoA
O-methyltransferase - like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 510
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 179 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 238
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 239 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 298
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 299 ccgatgaggg 308
>gb|CD027166.1|CD027166 NXNV027G07 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV027G07 5' similar to Arabidopsis thaliana sequence
At4g34050 caffeoyl-CoA O-methyltransferase - like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 518
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 153 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 212
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 213 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 272
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 273 ccgatgaggg 282
>gb|CF389766.1|CF389766 RTDR2_5_A09.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_5_A09_A021 5', mRNA
sequence
Length = 712
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 178 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 237
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 238 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 297
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 298 ccgatgaggg 307
>gb|CF396117.1|CF396117 RTDS2_13_C03.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_13_C03_A021 5', mRNA sequence
Length = 747
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 162 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 221
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 222 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 281
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 282 ccgatgaggg 291
>gb|CF397756.1|CF397756 RTDS3_1_C11.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_1_C11_A022 5', mRNA sequence
Length = 737
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 152 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 211
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 212 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 271
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 272 ccgatgaggg 281
>gb|CF472622.1|CF472622 RTDS1_10_F05.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_10_F05_A015 5', mRNA sequence
Length = 762
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 177 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 236
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 237 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 296
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 297 ccgatgaggg 306
>gb|CF473897.1|CF473897 RTWW2_19_E08.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_19_E08_A021 5', mRNA sequence
Length = 712
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 151 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 210
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 211 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 270
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 271 ccgatgaggg 280
>gb|CF476774.1|CF476774 RTWW3_3_C08.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_3_C08_A022 5', mRNA sequence
Length = 614
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 149 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 208
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 209 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 268
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 269 ccgatgaggg 278
>gb|CF478998.1|CF478998 RTWW3_21_F05.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_21_F05_A022 5', mRNA sequence
Length = 718
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 183 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 242
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 243 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 302
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 303 ccgatgaggg 312
>gb|CO165036.1|CO165036 FLD1_51_H11.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_51_H11_A029 5', mRNA sequence
Length = 809
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 114 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 173
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 174 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 233
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 234 ccgatgaggg 243
>gb|CO173178.1|CO173178 NDL1_34_B11.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_34_B11_A029 5', mRNA sequence
Length = 766
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 162 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 221
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 222 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 281
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 282 ccgatgaggg 291
>gb|CO362051.1|CO362051 NDL2_8_G11.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_8_G11_A029 5', mRNA sequence
Length = 530
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 137 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 196
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 197 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 256
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 257 ccgatgaggg 266
>gb|CO367832.1|CO367832 RTK1_37_A06.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_37_A06_A029 3', mRNA sequence
Length = 857
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Minus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 696 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 637
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 636 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 577
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 576 ccgatgaggg 567
>gb|CO367905.1|CO367905 RTK1_37_A06.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_37_A06_A029 5', mRNA sequence
Length = 841
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Minus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 786 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 727
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 726 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 667
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 666 ccgatgaggg 657
>gb|DR047556.1|DR047556 RTBOR1_1_H07.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_1_H07_A029 5', mRNA sequence
Length = 635
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 179 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 238
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 239 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 298
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 299 ccgatgaggg 308
>gb|DR055470.1|DR055470 RTCA1_23_H04.g2_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_23_H04_A029 5', mRNA sequence
Length = 680
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 171 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 230
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 231 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 290
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 291 ccgatgaggg 300
>gb|DR090086.1|DR090086 RTAL1_12_D05.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_12_D05_A029 5', mRNA sequence
Length = 608
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 186 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 245
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 246 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 305
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 306 ccgatgaggg 315
>gb|DR102419.1|DR102419 STRR1_81_A09.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_81_A09_A033 3', mRNA sequence
Length = 825
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Minus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 646 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 587
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 586 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 527
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 526 ccgatgaggg 517
>dbj|BD224282.1| Materials and methods for the modification of plant lignin content
Length = 1026
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 187 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 246
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 247 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 306
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 307 ccgatgaggg 316
>dbj|BD224329.1| Materials and methods for the modification of plant lignin content
Length = 562
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 264 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 323
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 324 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 383
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 384 ccgatgaggg 393
>dbj|BD224370.1| Materials and methods for the modification of plant lignin content
Length = 1012
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 173 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 232
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 233 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 292
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 293 ccgatgaggg 302
>dbj|BD272987.1| Materials and methods for the modification of isoprenoid content,
compostition and metabolism
Length = 562
Score = 60.0 bits (30), Expect = 2e-007
Identities = 105/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 264 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 323
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 324 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 383
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 384 ccgatgaggg 393
>gb|AW736883.1|AW736883 NXNV_080_H05_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_080_H05 5' similar to Arabidopsis thaliana
sequence At4g34050 caffeoyl-CoA O-methyltransferase -
like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 343
Score = 56.0 bits (28), Expect = 3e-006
Identities = 91/112 (81%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 153 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 212
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgac 331
||||||||||| ||||| | || |||||||| || |||||||| |||||
Sbjct: 213 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgac 264
>gb|BE452094.1|BE452094 NXCI_009_F05_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_009_F05 5' similar to Arabidopsis
thaliana sequence At4g34050 caffeoyl-CoA
O-methyltransferase - like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 239
Score = 56.0 bits (28), Expect = 3e-006
Identities = 91/112 (81%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 20 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 79
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgac 331
||||||||||| ||||| | || |||||||| || |||||||| |||||
Sbjct: 80 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgac 131
>gb|BQ696163.1|BQ696163 NXPV_039_A12_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_039_A12 5' similar to Arabidopsis
thaliana sequence At4g34050 caffeoyl-CoA
O-methyltransferase - like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 383
Score = 56.0 bits (28), Expect = 3e-006
Identities = 91/112 (81%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 178 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 237
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgac 331
||||||||||| ||||| | || |||||||| || |||||||| |||||
Sbjct: 238 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgac 289
>gb|CO171218.1|CO171218 NDL1_20_A04.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_20_A04_A029 3', mRNA sequence
Length = 752
Score = 54.0 bits (27), Expect = 1e-005
Identities = 84/103 (81%)
Strand = Plus / Minus
Query: 247 tggacacgagcgtgtacccgcgggagccggagagcatgaaggagctgcgcgagatcaccg 306
|||| |||||||||||||| || ||||| ||| ||||||||||| ||||| | || |
Sbjct: 752 tggaaacgagcgtgtaccctcgtgagcccgagccaatgaaggagctccgcgaagtgactg 693
Query: 307 ccaagcacccatggaacctgatgaccacctccgccgacgaggg 349
||||||| || |||||||| ||||| || || ||||| |||||
Sbjct: 692 ccaagcatccctggaacctcatgactacttctgccgatgaggg 650
>gb|AW754548.1|AW754548 PC03E05 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC03E05, mRNA sequence
Length = 452
Score = 52.0 bits (26), Expect = 5e-005
Identities = 104/130 (80%)
Strand = Plus / Minus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| ||||| |||||||| || ||||| |||
Sbjct: 283 agagcgatgccctctatcagtatatattggaaacgagtgtgtaccctcgtgagcctgagc 224
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 223 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 164
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 163 ccgatgaggg 154
>gb|AL750465.1|AL750465 AL750465 RN Pinus pinaster cDNA clone RN02G10 similar to
CAFFEOYL-COA O-METHYLTRANSFERASE, mRNA sequence
Length = 502
Score = 52.0 bits (26), Expect = 5e-005
Identities = 104/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 154 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 213
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||| ||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 214 caatgaaagagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 273
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 274 ccgatgaggg 283
>gb|BX250520.1|BX250520 BX250520 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP038A07 similar to CAFFEOYL COA O
METHYLTRANSFERASE, mRNA sequence
Length = 689
Score = 52.0 bits (26), Expect = 5e-005
Identities = 104/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 185 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 244
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||| ||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 245 caatgaaagagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 304
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 305 ccgatgaggg 314
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 612 tcgttcgacttcgccttcgtggacgccgacaaggacaactacctcagctaccacgagcg 670
||||||||||| | |||||||| |||||||| |||||||| || | ||||||| ||||
Sbjct: 577 tcgttcgactttgtgttcgtggatgccgacaaagacaactatctaaactaccacaagcg 635
>gb|BX251216.1|BX251216 BX251216 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP046H01 similar to CAFFEOYL COA O
METHYLTRANSFERASE, mRNA sequence
Length = 674
Score = 52.0 bits (26), Expect = 5e-005
Identities = 104/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 180 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 239
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||| ||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 240 caatgaaagagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 299
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 300 ccgatgaggg 309
Score = 42.1 bits (21), Expect = 0.051
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 612 tcgttcgacttcgccttcgtggacgccgacaaggacaacta 652
||||||||||| | |||||||| |||||||| ||||||||
Sbjct: 572 tcgttcgactttgtgttcgtggatgccgacaaagacaacta 612
>gb|BX251392.1|BX251392 BX251392 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP049A10 similar to CAFFEOYL COA O
METHYLTRANSFERASE, mRNA sequence
Length = 699
Score = 52.0 bits (26), Expect = 5e-005
Identities = 104/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 179 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 238
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||| ||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 239 caatgaaagagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 298
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 299 ccgatgaggg 308
>gb|BX252395.1|BX252395 BX252395 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP063H06 similar to CAFFEOYL COA O
METHYLTRANSFERASE, mRNA sequence
Length = 695
Score = 52.0 bits (26), Expect = 5e-005
Identities = 104/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 179 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 238
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||| ||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 239 caatgaaagagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 298
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 299 ccgatgaggg 308
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 612 tcgttcgacttcgccttcgtggacgccgacaaggacaactacctcagctaccacgagcg 670
||||||||||| | |||||||| |||||||| |||||||| || | ||||||| ||||
Sbjct: 571 tcgttcgactttgtgttcgtggatgccgacaaagacaactatctaaactaccacaagcg 629
>gb|BX254999.1|BX254999 BX254999 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP109A05 similar to CAFFEOYL COA O
METHYLTRANSFERASE, mRNA sequence
Length = 674
Score = 52.0 bits (26), Expect = 5e-005
Identities = 104/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 178 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 237
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||| ||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 238 caatgaaagagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 297
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 298 ccgatgaggg 307
Score = 46.1 bits (23), Expect = 0.003
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 612 tcgttcgacttcgccttcgtggacgccgacaaggacaactacctcagctaccacgagcg 670
||||||||||| | |||||||| |||||||| |||||||| || | ||||||| ||||
Sbjct: 570 tcgttcgactttgtgttcgtggatgccgacaaagacaactatctaaactaccacaagcg 628
>gb|BX255659.1|BX255659 BX255659 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP008C03 similar to CAFFEOYL COA O
METHYLTRANSFERASE, mRNA sequence
Length = 688
Score = 52.0 bits (26), Expect = 5e-005
Identities = 104/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| |||||||||||||| || ||||| |||
Sbjct: 388 agagcgatgccctctatcagtatatattggaaacgagcgtgtaccctcgtgagcccgagc 447
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||| ||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 448 caatgaaagagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 507
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 508 ccgatgaggg 517
>gb|BE643871.1|BE643871 NXCI_048_C12_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_048_C12 5' similar to Arabidopsis
thaliana sequence At4g34050 caffeoyl-CoA
O-methyltransferase - like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 476
Score = 52.0 bits (26), Expect = 5e-005
Identities = 104/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| ||||| |||||||| || ||||| |||
Sbjct: 52 agagcgatgccctctatcagtatatattggaaacgagtgtgtaccctcgtgagcctgagc 111
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 112 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 171
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 172 ccgatgaggg 181
>gb|BE761828.1|BE761828 NXCI_070_C06_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_070_C06 5' similar to Arabidopsis
thaliana sequence At4g34050 caffeoyl-CoA
O-methyltransferase - like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 533
Score = 52.0 bits (26), Expect = 5e-005
Identities = 104/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| ||||| |||||||| || ||||| |||
Sbjct: 249 agagcgatgccctctatcagtatatattggaaacgagtgtgtaccctcgtgagcctgagc 308
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 309 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 368
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 369 ccgatgaggg 378
>gb|BE997149.1|BE997149 NXCI_104_F07_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_104_F07 5' similar to Arabidopsis
thaliana sequence At4g34050 caffeoyl-CoA
O-methyltransferase - like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 429
Score = 52.0 bits (26), Expect = 5e-005
Identities = 104/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| ||||| |||||||| || ||||| |||
Sbjct: 52 agagcgatgccctctatcagtatatattggaaacgagtgtgtaccctcgtgagcctgagc 111
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 112 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 171
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 172 ccgatgaggg 181
>gb|BF221142.1|BF221142 NXCI_163_H03_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_163_H03 5' similar to Arabidopsis
thaliana sequence At4g34050 caffeoyl-CoA
O-methyltransferase - like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 307
Score = 52.0 bits (26), Expect = 5e-005
Identities = 104/130 (80%)
Strand = Plus / Plus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| ||||| |||||||| || ||||| |||
Sbjct: 91 agagcgatgccctctatcagtatatattggaaacgagtgtgtaccctcgtgagcctgagc 150
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 151 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 210
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 211 ccgatgaggg 220
>gb|BG317811.1|BG317811 NXPV_005_H12_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_005_H12 5' similar to Arabidopsis
thaliana sequence At4g34050 caffeoyl-CoA
O-methyltransferase - like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 520
Score = 52.0 bits (26), Expect = 5e-005
Identities = 104/130 (80%)
Strand = Plus / Minus
Query: 220 agagcgacgacctctaccagtacatcctggacacgagcgtgtacccgcgggagccggaga 279
||||||| | |||||| ||||| || |||| ||||| |||||||| || ||||| |||
Sbjct: 351 agagcgatgccctctatcagtatatattggaaacgagtgtgtaccctcgtgagcctgagc 292
Query: 280 gcatgaaggagctgcgcgagatcaccgccaagcacccatggaacctgatgaccacctccg 339
||||||||||| ||||| | || |||||||| || |||||||| ||||| || || |
Sbjct: 291 caatgaaggagctccgcgaagtgactgccaagcatccctggaacctcatgactacttctg 232
Query: 340 ccgacgaggg 349
|||| |||||
Sbjct: 231 ccgatgaggg 222
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 97,022
Number of Sequences: 355925
Number of extensions: 97022
Number of successful extensions: 24786
Number of sequences better than 0.5: 210
Number of HSP's better than 0.5 without gapping: 210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 24057
Number of HSP's gapped (non-prelim): 726
length of query: 1190
length of database: 217,277,237
effective HSP length: 19
effective length of query: 1171
effective length of database: 210,514,662
effective search space: 246512669202
effective search space used: 246512669202
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)