BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2441373.2.3
(986 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AI813042.1|AI813042 20B10 Pine Lambda Zap Xylem library ... 234 6e-060
gb|CF474268.1|CF474268 RTWW2_17_E05.g1_A021 Well-watered lo... 234 6e-060
gb|CO158370.1|CO158370 FLD1_6_B04.g1_A029 Root flooded Pinu... 234 6e-060
gb|CO367313.1|CO367313 RTK1_33_C06.g1_A029 Roots minus pota... 234 6e-060
gb|CX645910.1|CX645910 COLD1_6_B10.b1_A029 Root cold Pinus ... 234 6e-060
gb|CX645983.1|CX645983 COLD1_6_B10.g1_A029 Root cold Pinus ... 234 6e-060
gb|CX649008.1|CX649008 COLD1_32_H01.b1_A029 Root cold Pinus... 234 6e-060
gb|DR010916.1|DR010916 HEAT1_2_D02.b1_A029 Root at 37 C for... 234 6e-060
gb|DR011123.1|DR011123 HEAT1_3_D02.g1_A029 Root at 37 C for... 234 6e-060
gb|AW869909.1|AW869909 NXNV_122_H10_F Nsf Xylem Normal wood... 222 2e-056
gb|BX250558.1|BX250558 BX250558 Pinus pinaster differenciat... 218 3e-055
gb|BX251181.1|BX251181 BX251181 Pinus pinaster differenciat... 218 3e-055
gb|BX251352.1|BX251352 BX251352 Pinus pinaster differenciat... 218 3e-055
gb|BX252911.1|BX252911 BX252911 Pinus pinaster differenciat... 218 3e-055
gb|BQ633732.1|BQ633732 NXRV060_A09_F NXRV (Nsf Xylem Root w... 218 3e-055
gb|BX680125.1|BX680125 BX680125 RS Pinus pinaster cDNA clon... 218 3e-055
gb|CX645322.1|CX645322 COLD1_2_A02.b1_A029 Root cold Pinus ... 218 3e-055
gb|DR011059.1|DR011059 HEAT1_3_D02.b1_A029 Root at 37 C for... 218 3e-055
gb|DR056985.1|DR056985 RTNIT1_1_G06.g1_A029 Roots minus nit... 218 3e-055
gb|BQ699396.1|BQ699396 NXRV127_C09_F NXRV (Nsf Xylem Root w... 214 5e-054
gb|BQ701100.1|BQ701100 NXRV115_F02_F NXRV (Nsf Xylem Root w... 212 2e-053
gb|BG040535.1|BG040535 NXSI_112_C08_F NXSI (Nsf Xylem Side ... 208 3e-052
gb|BQ696679.1|BQ696679 NXPV_044_A09_F NXPV (Nsf Xylem Plani... 206 1e-051
gb|DR056905.1|DR056905 RTNIT1_1_G06.b1_A029 Roots minus nit... 206 1e-051
gb|CO160684.1|CO160684 FLD1_23_F08.b1_A029 Root flooded Pin... 202 2e-050
gb|AW225786.1|AW225786 ST71G06 Pine TriplEx shoot tip libra... 194 5e-048
gb|BX250427.1|BX250427 BX250427 Pinus pinaster differenciat... 194 5e-048
gb|BX251632.1|BX251632 BX251632 Pinus pinaster differenciat... 194 5e-048
gb|BX252969.1|BX252969 BX252969 Pinus pinaster differenciat... 194 5e-048
gb|CF395792.1|CF395792 RTDS2_17_C02.g1_A021 Drought-stresse... 194 5e-048
gb|CF396165.1|CF396165 RTDS2_15_A03.g1_A021 Drought-stresse... 194 5e-048
gb|CF477915.1|CF477915 RTWW3_13_D06.g1_A022 Well-watered lo... 194 5e-048
gb|CF479332.1|CF479332 RTWW3_23_E02.g1_A022 Well-watered lo... 194 5e-048
gb|CO165204.1|CO165204 FLD1_53_B08.b1_A029 Root flooded Pin... 194 5e-048
gb|CO165279.1|CO165279 FLD1_53_B08.g1_A029 Root flooded Pin... 194 5e-048
gb|CO363484.1|CO363484 RTK1_10_B03.b1_A029 Roots minus pota... 194 5e-048
gb|CO363699.1|CO363699 RTK1_11_G04.b1_A029 Roots minus pota... 194 5e-048
gb|CO363789.1|CO363789 RTK1_11_G04.g1_A029 Roots minus pota... 194 5e-048
gb|CV033412.1|CV033412 RTNACL1_34_H07.b1_A029 Roots plus ad... 194 5e-048
gb|CV033499.1|CV033499 RTNACL1_34_H07.g1_A029 Roots plus ad... 194 5e-048
gb|CV036354.1|CV036354 RTNACL1_58_D09.g1_A029 Roots plus ad... 194 5e-048
gb|CX645441.1|CX645441 COLD1_2_G07.g1_A029 Root cold Pinus ... 194 5e-048
gb|CX648246.1|CX648246 COLD1_27_A07.g1_A029 Root cold Pinus... 194 5e-048
gb|CX712509.1|CX712509 RTPQ1_3_A06.b2_A032 Roots treated wi... 194 5e-048
gb|CX712587.1|CX712587 RTPQ1_3_A06.g1_A032 Roots treated wi... 194 5e-048
gb|CX712846.1|CX712846 RTPQ1_5_E04.b1_A032 Roots treated wi... 194 5e-048
gb|CX712915.1|CX712915 RTPQ1_5_E04.g1_A032 Roots treated wi... 194 5e-048
gb|DR012949.1|DR012949 HEAT1_16_B12.b1_A029 Root at 37 C fo... 194 5e-048
gb|DR013028.1|DR013028 HEAT1_16_B12.g1_A029 Root at 37 C fo... 194 5e-048
gb|DR013246.1|DR013246 HEAT1_18_D03.b1_A029 Root at 37 C fo... 194 5e-048
gb|DR013321.1|DR013321 HEAT1_18_D03.g1_A029 Root at 37 C fo... 194 5e-048
gb|DR015749.1|DR015749 STRS1_5_H09.b1_A034 Shoot tip pitch ... 194 5e-048
gb|DR015832.1|DR015832 STRS1_5_H09.g1_A034 Shoot tip pitch ... 194 5e-048
gb|DR024464.1|DR024464 STRS1_65_D06.b1_A034 Shoot tip pitch... 194 5e-048
gb|DR078025.1|DR078025 RTFEPL1_1_A10.g1_A029 Roots plus add... 194 5e-048
gb|DR079451.1|DR079451 RTFEPL1_11_H01.b1_A029 Roots plus ad... 194 5e-048
gb|DR098436.1|DR098436 STRR1_45_B04.g1_A033 Stem Response R... 194 5e-048
gb|DR111266.1|DR111266 RTS1_16_B10.g1_A029 Roots minus sulf... 194 5e-048
gb|DR387840.1|DR387840 RTHG1_24_B02.g2_A029 Roots plus adde... 194 5e-048
gb|DR745046.1|DR745046 RTCU1_26_D11.g1_A029 Roots plus adde... 194 5e-048
gb|AW290140.1|AW290140 NXNV012A10F Nsf Xylem Normal wood Ve... 190 7e-047
gb|CD026786.1|CD026786 NXNV012A10 Nsf Xylem Normal wood Ver... 190 7e-047
gb|BX249414.1|BX249414 BX249414 Pinus pinaster differenciat... 186 1e-045
gb|BX250061.1|BX250061 BX250061 Pinus pinaster differenciat... 186 1e-045
gb|BX251259.1|BX251259 BX251259 Pinus pinaster differenciat... 186 1e-045
gb|BX251421.1|BX251421 BX251421 Pinus pinaster differenciat... 186 1e-045
gb|BX251526.1|BX251526 BX251526 Pinus pinaster differenciat... 186 1e-045
gb|BX252481.1|BX252481 BX252481 Pinus pinaster differenciat... 186 1e-045
gb|BX253960.1|BX253960 BX253960 Pinus pinaster differenciat... 186 1e-045
gb|CX650948.1|CX650948 COLD1_49_D08.b1_A029 Root cold Pinus... 186 1e-045
gb|DR011263.1|DR011263 HEAT1_4_D06.g1_A029 Root at 37 C for... 186 1e-045
gb|BX253876.1|BX253876 BX253876 Pinus pinaster differenciat... 184 5e-045
gb|BX251679.1|BX251679 BX251679 Pinus pinaster differenciat... 180 7e-044
gb|AW065205.1|AW065205 ST40H09 Pine TriplEx shoot tip libra... 178 3e-043
gb|BF517174.1|BF517174 NXSI_011_C10_F NXSI (Nsf Xylem Side ... 174 4e-042
gb|CR393462.1|CR393462 CR393462 RN Pinus pinaster cDNA clon... 174 4e-042
gb|CR394070.1|CR394070 CR394070 RN Pinus pinaster cDNA clon... 174 4e-042
gb|AW985466.1|AW985466 NXNV_136_H11_F Nsf Xylem Normal wood... 172 2e-041
gb|CF663200.1|CF663200 RTCNT1_1_A01.g1_A029 Root control Pi... 172 2e-041
gb|BG040889.1|BG040889 NXSI_116_D02_F NXSI (Nsf Xylem Side ... 170 7e-041
gb|BQ634170.1|BQ634170 NXRV064_F04_F NXRV (Nsf Xylem Root w... 170 7e-041
gb|CF388337.1|CF388337 RTDR2_2_D05.g1_A021 Loblolly pine ro... 170 7e-041
gb|CF388776.1|CF388776 RTDR2_15_A07.g1_A021 Loblolly pine r... 170 7e-041
gb|CF389106.1|CF389106 RTDR2_13_F06.g1_A021 Loblolly pine r... 170 7e-041
gb|CF394808.1|CF394808 RTDS2_7_E03.g1_A021 Drought-stressed... 170 7e-041
gb|CF476118.1|CF476118 RTWW2_21_A01.b1_A021 Well-watered lo... 170 7e-041
gb|CF476152.1|CF476152 RTWW2_21_C01.g1_A021 Well-watered lo... 170 7e-041
gb|CF477402.1|CF477402 RTWW3_7_C02.g1_A022 Well-watered lob... 170 7e-041
gb|CF665067.1|CF665067 RTCNT1_13_E08.g1_A029 Root control P... 170 7e-041
gb|CO161351.1|CO161351 FLD1_28_F03.b1_A029 Root flooded Pin... 170 7e-041
gb|CO161429.1|CO161429 FLD1_28_F03.g1_A029 Root flooded Pin... 170 7e-041
gb|CO162304.1|CO162304 FLD1_34_A12.g1_A029 Root flooded Pin... 170 7e-041
gb|CO197802.1|CO197802 GEO1_9_E11.b1_A029 Root gravitropism... 170 7e-041
gb|CO199481.1|CO199481 GEO2_1_B02.g1_A032 Root gravitropism... 170 7e-041
gb|CO363531.1|CO363531 RTK1_10_G04.b1_A029 Roots minus pota... 170 7e-041
gb|CV032240.1|CV032240 RTNACL1_6_G06.g2_A029 Roots plus add... 170 7e-041
gb|CX645792.1|CX645792 COLD1_5_G10.b1_A029 Root cold Pinus ... 170 7e-041
gb|CX645880.1|CX645880 COLD1_5_G10.g1_A029 Root cold Pinus ... 170 7e-041
gb|CX647957.1|CX647957 COLD1_25_D04.g1_A029 Root cold Pinus... 170 7e-041
gb|CX651123.1|CX651123 COLD1_50_F10.b1_A029 Root cold Pinus... 170 7e-041
gb|CX714661.1|CX714661 RTPQ1_24_A11.g1_A032 Roots treated w... 170 7e-041
gb|DR011190.1|DR011190 HEAT1_4_D06.b1_A029 Root at 37 C for... 170 7e-041
gb|DR014279.1|DR014279 HEAT1_24_B08.g1_A029 Root at 37 C fo... 170 7e-041
gb|DR016851.1|DR016851 STRS1_12_C08.g1_A034 Shoot tip pitch... 170 7e-041
gb|DR020528.1|DR020528 STRS1_37_C12.g1_A034 Shoot tip pitch... 170 7e-041
gb|DR024997.1|DR024997 STRS1_69_A05.b1_A034 Shoot tip pitch... 170 7e-041
gb|DR048251.1|DR048251 RTBOR1_7_B11.g2_A029 Roots plus adde... 170 7e-041
gb|DR051544.1|DR051544 RTBOR1_30_G03.g1_A029 Roots plus add... 170 7e-041
gb|DR056138.1|DR056138 RTCA1_28_G06.b1_A029 Roots minus cal... 170 7e-041
gb|DR056217.1|DR056217 RTCA1_28_G06.g1_A029 Roots minus cal... 170 7e-041
gb|DR091600.1|DR091600 RTAL1_22_E09.g1_A029 Roots plus adde... 170 7e-041
gb|DR098411.1|DR098411 STRR1_45_G07.b1_A033 Stem Response R... 170 7e-041
gb|DR098488.1|DR098488 STRR1_45_G07.g1_A033 Stem Response R... 170 7e-041
gb|DR119007.1|DR119007 RTMG1_20_C05.g1_A029 Roots minus mag... 170 7e-041
gb|DR120818.1|DR120818 RTMG1_32_D11.b1_A029 Roots minus mag... 170 7e-041
gb|DR120899.1|DR120899 RTMG1_32_D11.g1_A029 Roots minus mag... 170 7e-041
gb|DR385561.1|DR385561 RTHG1_9_A05.g1_A029 Roots plus added... 170 7e-041
gb|DR386719.1|DR386719 RTHG1_17_B09.b1_A029 Roots plus adde... 170 7e-041
gb|DR386801.1|DR386801 RTHG1_17_B09.g1_A029 Roots plus adde... 170 7e-041
gb|DR388962.1|DR388962 RTHG1_31_C07.g1_A029 Roots plus adde... 170 7e-041
gb|DR742958.1|DR742958 RTCU1_8_C09.g2_A029 Roots plus added... 170 7e-041
gb|DR744123.1|DR744123 RTCU1_20_H04.b1_A029 Roots plus adde... 170 7e-041
gb|DR744206.1|DR744206 RTCU1_20_H04.g1_A029 Roots plus adde... 170 7e-041
gb|DR081528.1|DR081528 RTFEPL1_30_G07.b1_A029 Roots plus ad... 168 3e-040
gb|DR111200.1|DR111200 RTS1_16_B10.b1_A029 Roots minus sulf... 168 3e-040
gb|BQ655403.1|BQ655403 NXRV093_H11_F NXRV (Nsf Xylem Root w... 167 1e-039
gb|CX645375.1|CX645375 COLD1_2_G07.b1_A029 Root cold Pinus ... 167 1e-039
gb|CX648170.1|CX648170 COLD1_27_A07.b1_A029 Root cold Pinus... 167 1e-039
gb|BX254040.1|BX254040 BX254040 Pinus pinaster differenciat... 165 4e-039
gb|DR100148.1|DR100148 STRR1_62_C08.b1_A033 Stem Response R... 165 4e-039
gb|CF390749.1|CF390749 RTDR2_17_D07.g1_A021 Loblolly pine r... 163 2e-038
gb|DR744978.1|DR744978 RTCU1_26_D11.b1_A029 Roots plus adde... 163 2e-038
gb|BX252793.1|BX252793 BX252793 Pinus pinaster differenciat... 159 3e-037
gb|CX651776.1|CX651776 COLD1_54_E08.g1_A029 Root cold Pinus... 159 3e-037
gb|DR111640.1|DR111640 RTS1_19_F02.b1_A029 Roots minus sulf... 159 3e-037
gb|CR392450.1|CR392450 CR392450 RN Pinus pinaster cDNA clon... 157 1e-036
gb|AW981518.1|AW981518 PC13E05 Pine TriplEx pollen cone lib... 155 4e-036
gb|AW626628.1|AW626628 NXNV067F02 Nsf Xylem Normal wood Ver... 155 4e-036
gb|BQ699603.1|BQ699603 NXRV124_D08_F NXRV (Nsf Xylem Root w... 155 4e-036
gb|AW289693.1|AW289693 NXNV004E05F Nsf Xylem Normal wood Ve... 153 2e-035
gb|BE657147.1|BE657147 NXCI_064_E05_F NXCI (Nsf Xylem Compr... 153 2e-035
gb|BI203018.1|BI203018 NXPV_099_A05_F NXPV (Nsf Xylem Plani... 153 2e-035
gb|CD028255.1|CD028255 NXNV004E05 Nsf Xylem Normal wood Ver... 153 2e-035
gb|CF395753.1|CF395753 RTDS2_17_C02.b1_A021 Drought-stresse... 153 2e-035
gb|CF477842.1|CF477842 RTWW3_13_D06.b1_A022 Well-watered lo... 153 2e-035
gb|DR098226.1|DR098226 STRR1_40_A05.b1_A033 Stem Response R... 153 2e-035
gb|BQ701886.1|BQ701886 NXSI_121_G06_F NXSI (Nsf Xylem Side ... 151 6e-035
gb|CO199411.1|CO199411 GEO2_1_B02.b1_A032 Root gravitropism... 151 6e-035
gb|DR060941.1|DR060941 RTNIT1_31_B04.b1_A029 Roots minus ni... 151 6e-035
gb|AW056521.1|AW056521 ST51B09 Pine TriplEx shoot tip libra... 149 3e-034
gb|BQ699950.1|BQ699950 NXRV132_B10_F NXRV (Nsf Xylem Root w... 149 3e-034
gb|AI812648.1|AI812648 17D8 Pine Lambda Zap Xylem library P... 145 4e-033
gb|DR159710.1|DR159710 RTFE1_1_C01.b1_A029 Roots minus iron... 145 4e-033
gb|BX248902.1|BX248902 BX248902 Pinus pinaster differenciat... 141 6e-032
gb|BM428597.1|BM428597 NXRV_019_B01_F NXRV (Nsf Xylem Root ... 141 6e-032
gb|BQ635067.1|BQ635067 NXRV076_E11_F NXRV (Nsf Xylem Root w... 141 6e-032
gb|BQ701745.1|BQ701745 NXSI_120_B04_F NXSI (Nsf Xylem Side ... 141 6e-032
gb|BQ696979.1|BQ696979 NXPV_047_F08_F NXPV (Nsf Xylem Plani... 139 2e-031
gb|BQ699794.1|BQ699794 NXRV129_D08_F NXRV (Nsf Xylem Root w... 139 2e-031
gb|CF479247.1|CF479247 RTWW3_23_C02.b1_A022 Well-watered lo... 137 1e-030
gb|CV032165.1|CV032165 RTNACL1_6_G06.b1_A029 Roots plus add... 137 1e-030
gb|CX713808.1|CX713808 RTPQ1_13_H04.b1_A032 Roots treated w... 137 1e-030
gb|AW697643.1|AW697643 ST64H02 Pine TriplEx shoot tip libra... 135 4e-030
gb|BF610525.1|BF610525 NXSI_059_F03_F NXSI (Nsf Xylem Side ... 135 4e-030
gb|BG318496.1|BG318496 NXPV_014_D11_F NXPV (Nsf Xylem Plani... 135 4e-030
gb|BG526939.1|BG526939 NXPV_057_F05_F NXPV (Nsf Xylem Plani... 135 4e-030
gb|BQ701378.1|BQ701378 NXSI_063_E03_F NXSI (Nsf Xylem Side ... 135 4e-030
gb|CF388254.1|CF388254 RTDR2_2_D05.b1_A021 Loblolly pine ro... 135 4e-030
gb|CO162224.1|CO162224 FLD1_34_A12.b1_A029 Root flooded Pin... 135 4e-030
gb|CO197871.1|CO197871 GEO1_9_E11.g1_A029 Root gravitropism... 135 4e-030
gb|DR118929.1|DR118929 RTMG1_20_C05.b1_A029 Roots minus mag... 135 4e-030
gb|AI812862.1|AI812862 20H2 Pine Lambda Zap Xylem library P... 133 2e-029
gb|AW010319.1|AW010319 ST04F07 Pine TriplEx shoot tip libra... 133 2e-029
gb|AW043099.1|AW043099 ST29C12 Pine TriplEx shoot tip libra... 133 2e-029
gb|AW064974.1|AW064974 ST38B03 Pine TriplEx shoot tip libra... 133 2e-029
gb|BE496456.1|BE496456 NXCI_018_C11_F NXCI (Nsf Xylem Compr... 133 2e-029
gb|BF517149.1|BF517149 NXSI_011_A11_F NXSI (Nsf Xylem Side ... 133 2e-029
gb|BF517221.1|BF517221 NXSI_011_G12_F NXSI (Nsf Xylem Side ... 133 2e-029
gb|BG039292.1|BG039292 NXSI_097_D11_F NXSI (Nsf Xylem Side ... 133 2e-029
gb|BG039766.1|BG039766 NXSI_103_F10_F NXSI (Nsf Xylem Side ... 133 2e-029
gb|BG040976.1|BG040976 NXSI_117_C09_F NXSI (Nsf Xylem Side ... 133 2e-029
gb|BG040983.1|BG040983 NXSI_117_D08_F NXSI (Nsf Xylem Side ... 133 2e-029
gb|BM492325.1|BM492325 NXRV_024_F11_F NXRV (Nsf Xylem Root ... 133 2e-029
gb|BQ699874.1|BQ699874 NXRV122_G02_F NXRV (Nsf Xylem Root w... 133 2e-029
gb|BQ701614.1|BQ701614 NXSI_111_F05_F NXSI (Nsf Xylem Side ... 133 2e-029
gb|BQ701640.1|BQ701640 NXSI_111_H08_F NXSI (Nsf Xylem Side ... 133 2e-029
gb|BQ702192.1|BQ702192 NXSI_126_A03_F NXSI (Nsf Xylem Side ... 133 2e-029
gb|DR081598.1|DR081598 RTFEPL1_30_G07.g1_A029 Roots plus ad... 133 2e-029
gb|DR384506.1|DR384506 RTHG1_2_E03.g1_A029 Roots plus added... 133 2e-029
gb|DR385910.1|DR385910 RTHG1_11_D01.g1_A029 Roots plus adde... 133 2e-029
gb|BG040230.1|BG040230 NXSI_110_A01_F NXSI (Nsf Xylem Side ... 127 9e-028
gb|BG832455.1|BG832455 NXPV_073_A08_F NXPV (Nsf Xylem Plani... 127 9e-028
gb|DR101519.1|DR101519 STRR1_73_G10.g1_A033 Stem Response R... 127 9e-028
gb|BF220703.1|BF220703 NXCI_149_E10_F NXCI (Nsf Xylem Compr... 125 4e-027
gb|AW870059.1|AW870059 NXNV_123_F01_F Nsf Xylem Normal wood... 123 1e-026
gb|BE187378.1|BE187378 NXNV_163_C03_F Nsf Xylem Normal wood... 123 1e-026
gb|BQ654455.1|BQ654455 NXRV080_E07_F NXRV (Nsf Xylem Root w... 123 1e-026
gb|BQ654822.1|BQ654822 NXRV086_B08_F NXRV (Nsf Xylem Root w... 123 1e-026
gb|BQ700407.1|BQ700407 NXRV105_C06_F NXRV (Nsf Xylem Root w... 123 1e-026
gb|AW587849.1|AW587849 ST67G06 Pine TriplEx shoot tip libra... 121 6e-026
gb|AW888044.1|AW888044 NXNV_126_E10_F Nsf Xylem Normal wood... 121 6e-026
gb|AW065075.1|AW065075 ST39C11 Pine TriplEx shoot tip libra... 119 2e-025
gb|AW869948.1|AW869948 NXNV_120_C06_F Nsf Xylem Normal wood... 117 9e-025
gb|BQ700268.1|BQ700268 NXRV103_D07_F NXRV (Nsf Xylem Root w... 117 9e-025
gb|CO162628.1|CO162628 FLD1_36_B07.g1_A029 Root flooded Pin... 117 9e-025
gb|CX652859.1|CX652859 COLD1_62_A04.b1_A029 Root cold Pinus... 117 9e-025
gb|CX652939.1|CX652939 COLD1_62_A04.g1_A029 Root cold Pinus... 117 9e-025
gb|AW888064.1|AW888064 NXNV_126_H02_F Nsf Xylem Normal wood... 115 4e-024
gb|CF394676.1|CF394676 RTDS2_7_E03.b1_A021 Drought-stressed... 115 4e-024
gb|DR056453.1|DR056453 RTCA1_30_H10.b1_A029 Roots minus cal... 115 4e-024
gb|DR077950.1|DR077950 RTFEPL1_1_A10.b1_A029 Roots plus add... 113 1e-023
gb|AW056479.1|AW056479 ST52D01 Pine TriplEx shoot tip libra... 111 6e-023
gb|BQ198339.1|BQ198339 NXLV127_E02_F NXLV (Nsf Xylem Late w... 111 6e-023
gb|BE997137.1|BE997137 NXCI_104_D07_F NXCI (Nsf Xylem Compr... 107 9e-022
gb|BQ290550.1|BQ290550 NXRV045_F05_F NXRV (Nsf Xylem Root w... 107 9e-022
gb|BQ699967.1|BQ699967 NXRV132_D06_F NXRV (Nsf Xylem Root w... 107 9e-022
gb|CD028005.1|CD028005 NXNV_144_H02_F Nsf Xylem Normal wood... 107 9e-022
gb|DR014203.1|DR014203 HEAT1_24_B08.b1_A029 Root at 37 C fo... 105 3e-021
gb|AW226487.1|AW226487 ST82H08 Pine TriplEx shoot tip libra... 103 1e-020
gb|AW289513.1|AW289513 NXNV001D07F Nsf Xylem Normal wood Ve... 103 1e-020
gb|BG039439.1|BG039439 NXSI_099_A04_F NXSI (Nsf Xylem Side ... 103 1e-020
gb|CD028045.1|CD028045 NXNV001D07 Nsf Xylem Normal wood Ver... 103 1e-020
gb|CX651021.1|CX651021 COLD1_49_D08.g1_A029 Root cold Pinus... 103 1e-020
gb|U76689.1|PTU76689 Pinus taeda xylem calmodulin mRNA, par... 103 1e-020
gb|BQ697113.1|BQ697113 NXPV_049_F10_F NXPV (Nsf Xylem Plani... 101 5e-020
gb|BF010548.1|BF010548 NXCI_085_G07_F NXCI (Nsf Xylem Compr... 100 2e-019
gb|BF221269.1|BF221269 NXCI_156_G04_F NXCI (Nsf Xylem Compr... 100 2e-019
gb|BF778077.1|BF778077 NXSI_081_F10_F NXSI (Nsf Xylem Side ... 100 2e-019
gb|CX651193.1|CX651193 COLD1_50_F10.g1_A029 Root cold Pinus... 100 2e-019
gb|AW754785.1|AW754785 PC07H05 Pine TriplEx pollen cone lib... 98 8e-019
gb|AW888155.1|AW888155 NXNV_129_G12_F Nsf Xylem Normal wood... 98 8e-019
gb|BF517081.1|BF517081 NXSI_008_H10_F NXSI (Nsf Xylem Side ... 98 8e-019
gb|BF517409.1|BF517409 NXSI_021_B08_F NXSI (Nsf Xylem Side ... 98 8e-019
gb|BX249546.1|BX249546 BX249546 Pinus pinaster differenciat... 96 3e-018
gb|BF609152.1|BF609152 NXSI_040_H11_F NXSI (Nsf Xylem Side ... 96 3e-018
gb|AW736848.1|AW736848 NXNV_083_F09_F Nsf Xylem Normal wood... 94 1e-017
gb|BE186971.1|BE186971 NXNV_158_H06_F Nsf Xylem Normal wood... 92 5e-017
gb|BG275758.1|BG275758 NXSI_145_E09_F NXSI (Nsf Xylem Side ... 92 5e-017
gb|DN609633.1|DN609633 EST962683 Subtracted pine embryo lib... 92 5e-017
gb|DR056531.1|DR056531 RTCA1_30_H10.g1_A029 Roots minus cal... 92 5e-017
gb|DT627587.1|DT627587 EST1156336 Subtracted pine embryo li... 92 5e-017
gb|BQ197879.1|BQ197879 NXLV121_H09_F NXLV (Nsf Xylem Late w... 90 2e-016
gb|BQ107635.1|BQ107635 NXLV100_D06_F NXLV (Nsf Xylem Late w... 88 8e-016
gb|DR089071.1|DR089071 RTAL1_6_H05.b1_A029 Roots plus added... 88 8e-016
gb|AA739874.1|AA739874 639 PtIFG2 Pinus taeda cDNA clone 90... 86 3e-015
gb|BF609669.1|BF609669 NXSI_047_H06_F NXSI (Nsf Xylem Side ... 86 3e-015
gb|CF672640.1|CF672640 RTCNT1_73_B02.b1_A029 Root control P... 86 3e-015
gb|BG040069.1|BG040069 NXSI_106_B07_F NXSI (Nsf Xylem Side ... 82 5e-014
gb|AW697686.1|AW697686 ST65E01 Pine TriplEx shoot tip libra... 80 2e-013
gb|CO162550.1|CO162550 FLD1_36_B07.b1_A029 Root flooded Pin... 80 2e-013
gb|AW042778.1|AW042778 ST25C09 Pine TriplEx shoot tip libra... 78 8e-013
gb|AW065016.1|AW065016 ST38F03 Pine TriplEx shoot tip libra... 78 8e-013
gb|BQ699004.1|BQ699004 NXRV118_C03_F NXRV (Nsf Xylem Root w... 78 8e-013
gb|CD017933.1|CD017933 NXCI_150_F12_F NXCI (Nsf Xylem Compr... 78 8e-013
gb|DR098293.1|DR098293 STRR1_40_A05.g1_A033 Stem Response R... 78 8e-013
gb|AW784089.1|AW784089 NXNV_117_F08_F Nsf Xylem Normal wood... 76 3e-012
gb|DR384428.1|DR384428 RTHG1_2_E03.b1_A029 Roots plus added... 76 3e-012
gb|AW985078.1|AW985078 NXNV_130_F06_F Nsf Xylem Normal wood... 74 1e-011
gb|BF609652.1|BF609652 NXSI_047_F10_F NXSI (Nsf Xylem Side ... 74 1e-011
gb|BQ695817.1|BQ695817 NXPV_033_A06_F NXPV (Nsf Xylem Plani... 74 1e-011
gb|BE123511.1|BE123511 NXNV_149_A11_F Nsf Xylem Normal wood... 72 5e-011
gb|BI077136.1|BI077136 NXPV_089_B09_F NXPV (Nsf Xylem Plani... 72 5e-011
gb|BQ107559.1|BQ107559 NXLV099_B02_F NXLV (Nsf Xylem Late w... 70 2e-010
gb|AA556350.1|AA556350 205 Loblolly pine C Pinus taeda cDNA... 68 7e-010
gb|AW698157.1|AW698157 NXNV_073_H03_F Nsf Xylem Normal wood... 68 7e-010
gb|BF777347.1|BF777347 NXSI_068_E12_F NXSI (Nsf Xylem Side ... 68 7e-010
gb|BF778030.1|BF778030 NXSI_081_B03_F NXSI (Nsf Xylem Side ... 68 7e-010
gb|CD027906.1|CD027906 NXNV_073_H03 Nsf Xylem Normal wood V... 68 7e-010
gb|AW985443.1|AW985443 NXNV_136_F02_F Nsf Xylem Normal wood... 66 3e-009
gb|AW985450.1|AW985450 NXNV_136_G05_F Nsf Xylem Normal wood... 66 3e-009
gb|BE762058.1|BE762058 NXCI_076_E05_F NXCI (Nsf Xylem Compr... 66 3e-009
gb|BQ635200.1|BQ635200 NXRV079_C03_F NXRV (Nsf Xylem Root w... 66 3e-009
gb|CF388745.1|CF388745 RTDR2_15_A07.b1_A021 Loblolly pine r... 66 3e-009
gb|DR089157.1|DR089157 RTAL1_6_H05.g1_A029 Roots plus added... 66 3e-009
gb|DR101338.1|DR101338 STRR1_72_E07.b1_A033 Stem Response R... 66 3e-009
gb|AI919882.1|AI919882 1412 Pine Lambda Zap Xylem library P... 64 1e-008
gb|AW042839.1|AW042839 ST26A09 Pine TriplEx shoot tip libra... 64 1e-008
gb|BX252413.1|BX252413 BX252413 Pinus pinaster differenciat... 64 1e-008
gb|BQ654527.1|BQ654527 NXRV081_D11_F NXRV (Nsf Xylem Root w... 64 1e-008
gb|BQ655728.1|BQ655728 NXRV098_D10_F NXRV (Nsf Xylem Root w... 64 1e-008
gb|BX678793.1|BX678793 BX678793 RS Pinus pinaster cDNA clon... 64 1e-008
gb|AW010181.1|AW010181 ST03A09 Pine TriplEx shoot tip libra... 62 5e-008
gb|AW226049.1|AW226049 ST76G05 Pine TriplEx shoot tip libra... 62 5e-008
gb|BE761968.1|BE761968 NXCI_075_D06_F NXCI (Nsf Xylem Compr... 62 5e-008
gb|BM133719.1|BM133719 NXLV_011_C09_F NXLV (Nsf Xylem Late ... 62 5e-008
gb|BQ699512.1|BQ699512 NXRV123_C06_F NXRV (Nsf Xylem Root w... 62 5e-008
gb|CF396645.1|CF396645 RTDS2_23_G05.b1_A021 Drought-stresse... 62 5e-008
gb|CF477349.1|CF477349 RTWW3_7_C02.b1_A022 Well-watered lob... 62 5e-008
gb|BE996888.1|BE996888 NXCI_103_G03_F NXCI (Nsf Xylem Compr... 58 7e-007
gb|BQ702893.1|BQ702893 NXSI_133_H10_F NXSI (Nsf Xylem Side ... 58 7e-007
gb|BF010821.1|BF010821 NXCI_095_C05_F NXCI (Nsf Xylem Compr... 56 3e-006
gb|BF060643.1|BF060643 NXCI_118_G11_F NXCI (Nsf Xylem Compr... 56 3e-006
gb|BF778677.1|BF778677 NXSI_090_F02_F NXSI (Nsf Xylem Side ... 56 3e-006
gb|BG040645.1|BG040645 NXSI_113_E01_F NXSI (Nsf Xylem Side ... 56 3e-006
gb|AW011337.1|AW011337 ST19F01 Pine TriplEx shoot tip libra... 54 1e-005
gb|BE209349.1|BE209349 NXNV_166_F12_F Nsf Xylem Normal wood... 54 1e-005
gb|BG040814.1|BG040814 NXSI_115_D09_F NXSI (Nsf Xylem Side ... 54 1e-005
gb|BG275793.1|BG275793 NXSI_145_H11_F NXSI (Nsf Xylem Side ... 54 1e-005
gb|DR016773.1|DR016773 STRS1_12_C08.b1_A034 Shoot tip pitch... 54 1e-005
gb|BE187006.1|BE187006 NXNV_157_F10_F Nsf Xylem Normal wood... 52 4e-005
gb|BM492130.1|BM492130 NXRV_021_A07_F NXRV (Nsf Xylem Root ... 50 2e-004
gb|CD025600.1|CD025600 NXSI_065_C02_F NXSI (Nsf Xylem Side ... 50 2e-004
gb|CD021918.1|CD021918 NXNV_183_F10_F Nsf Xylem Normal wood... 48 7e-004
gb|BM158230.1|BM158230 NXLV_031_B07_F NXLV (Nsf Xylem Late ... 46 0.003
gb|CX647304.1|CX647304 COLD1_15_D12.b1_A029 Root cold Pinus... 46 0.003
gb|CX647364.1|CX647364 COLD1_15_D12.g1_A029 Root cold Pinus... 46 0.003
gb|CD016087.1|CD016087 NXCI_022_H08_F NXCI (Nsf Xylem Compr... 44 0.011
gb|CD021154.1|CD021154 NXNV_118_B07_F Nsf Xylem Normal wood... 44 0.011
gb|AA556326.1|AA556326 181 Loblolly pine C Pinus taeda cDNA... 42 0.043
gb|BM158177.1|BM158177 NXLV_030_E01_F NXLV (Nsf Xylem Late ... 42 0.043
gb|BX680549.1|BX680549 BX680549 RS Pinus pinaster cDNA clon... 42 0.043
gb|AA556283.1|AA556283 138 Loblolly pine N Pinus taeda cDNA... 40 0.17
gb|BF610047.1|BF610047 NXSI_054_B06_F NXSI (Nsf Xylem Side ... 40 0.17
gb|BQ290476.1|BQ290476 NXRV046_G01_F NXRV (Nsf Xylem Root w... 40 0.17
gb|CD020763.1|CD020763 NXNV_075_A10_F Nsf Xylem Normal wood... 40 0.17
gb|CD021314.1|CD021314 NXNV_069_C04_F Nsf Xylem Normal wood... 40 0.17
>gb|AI813042.1|AI813042 20B10 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 544
Score = 234 bits (118), Expect = 6e-060
Identities = 349/426 (81%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 116 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 175
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || ||||| |||||||| || |||
Sbjct: 176 acaacaaaagaactggggactgtaatgcgttctctaggtcaaaatcctacagaagcagag 235
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
||||| |||||||| ||||| || ||||| |||||||| || ||||| |||||||| |||
Sbjct: 236 ctccaagacatgataaatgaagttgatgcagatggcaatggtaccattgattttcctgag 295
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| ||||| ||||| || |||||||||||
Sbjct: 296 tttcttaatctcatggcaaggaagatgaaggataccgattctgaagaggagctcaaggaa 355
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || || || || || ||||| || |||
Sbjct: 356 gcattccgtgtttttgacaaggatcaaaatggttttatatctgctgctgagctacgtcat 415
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||||| || || || ||||| || |||
Sbjct: 416 gtcatgacaaacctcggagagaagcttactgatgaggaagtggatgaaatgattcgggag 475
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|||||||| ||||||||||| || || || || ||||| ||||| || || ||||||||
Sbjct: 476 gctgatgtggatggtgatggacaaatcaattatgaggaatttgtgaaagttatgatggca 535
Query: 654 aagtga 659
||||||
Sbjct: 536 aagtga 541
>gb|CF474268.1|CF474268 RTWW2_17_E05.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_17_E05_A021 5', mRNA sequence
Length = 728
Score = 234 bits (118), Expect = 6e-060
Identities = 349/426 (81%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 71 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 130
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || ||||| |||||||| || |||
Sbjct: 131 acaacaaaagaactggggactgtaatgcgttctctaggtcaaaatcctacagaagcagag 190
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
||||| |||||||| ||||| || ||||| |||||||| || ||||| |||||||| |||
Sbjct: 191 ctccaagacatgataaatgaagttgatgcagatggcaatggtaccattgattttcctgag 250
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| ||||| ||||| || |||||||||||
Sbjct: 251 tttcttaatctcatggcaaggaagatgaaggataccgattctgaagaggagctcaaggaa 310
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || || || || || ||||| || |||
Sbjct: 311 gcattccgtgtttttgacaaggatcaaaatggttttatatctgctgctgagctacgtcat 370
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||||| || || || ||||| || |||
Sbjct: 371 gtcatgacaaacctcggagagaagcttactgatgaggaagtggatgaaatgattcgggag 430
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|||||||| ||||||||||| || || || || ||||| ||||| || || ||||||||
Sbjct: 431 gctgatgtggatggtgatggacaaatcaattatgaggaatttgtgaaagttatgatggca 490
Query: 654 aagtga 659
||||||
Sbjct: 491 aagtga 496
>gb|CO158370.1|CO158370 FLD1_6_B04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_6_B04_A029 5', mRNA sequence
Length = 759
Score = 234 bits (118), Expect = 6e-060
Identities = 349/426 (81%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 101 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 160
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || ||||| |||||||| || |||
Sbjct: 161 acaacaaaagaactggggactgtaatgcgttctctaggtcaaaatcctacagaagcagag 220
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
||||| |||||||| ||||| || ||||| |||||||| || ||||| |||||||| |||
Sbjct: 221 ctccaagacatgataaatgaagttgatgcagatggcaatggtaccattgattttcctgag 280
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| ||||| ||||| || |||||||||||
Sbjct: 281 tttcttaatctcatggcaaggaagatgaaggataccgattctgaagaggagctcaaggaa 340
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || || || || || ||||| || |||
Sbjct: 341 gcattccgtgtttttgacaaggatcaaaatggttttatatctgctgctgagctacgtcat 400
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||||| || || || ||||| || |||
Sbjct: 401 gtcatgacaaacctcggagagaagcttactgatgaggaagtggatgaaatgattcgggag 460
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|||||||| ||||||||||| || || || || ||||| ||||| || || ||||||||
Sbjct: 461 gctgatgtggatggtgatggacaaatcaattatgaggaatttgtgaaagttatgatggca 520
Query: 654 aagtga 659
||||||
Sbjct: 521 aagtga 526
>gb|CO367313.1|CO367313 RTK1_33_C06.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_33_C06_A029 5', mRNA sequence
Length = 781
Score = 234 bits (118), Expect = 6e-060
Identities = 349/426 (81%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 79 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 138
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || ||||| |||||||| || |||
Sbjct: 139 acaacaaaagaactggggactgtaatgcgttctctaggtcaaaatcctacagaagcagag 198
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
||||| |||||||| ||||| || ||||| |||||||| || ||||| |||||||| |||
Sbjct: 199 ctccaagacatgataaatgaagttgatgcagatggcaatggtaccattgattttcctgag 258
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| ||||| ||||| || |||||||||||
Sbjct: 259 tttcttaatctcatggcaaggaagatgaaggataccgattctgaagaggagctcaaggaa 318
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || || || || || ||||| || |||
Sbjct: 319 gcattccgtgtttttgacaaggatcaaaatggttttatatctgctgctgagctacgtcat 378
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||||| || || || ||||| || |||
Sbjct: 379 gtcatgacaaacctcggagagaagcttactgatgaggaagtggatgaaatgattcgggag 438
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|||||||| ||||||||||| || || || || ||||| ||||| || || ||||||||
Sbjct: 439 gctgatgtggatggtgatggacaaatcaattatgaggaatttgtgaaagttatgatggca 498
Query: 654 aagtga 659
||||||
Sbjct: 499 aagtga 504
>gb|CX645910.1|CX645910 COLD1_6_B10.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_6_B10_A029 3', mRNA sequence
Length = 824
Score = 234 bits (118), Expect = 6e-060
Identities = 349/426 (81%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 99 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 158
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || ||||| |||||||| || |||
Sbjct: 159 acaacaaaagaactggggactgtaatgcgttctctaggtcaaaatcctacagaagcagag 218
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
||||| |||||||| ||||| || ||||| |||||||| || ||||| |||||||| |||
Sbjct: 219 ctccaagacatgataaatgaagttgatgcagatggcaatggtaccattgattttcctgag 278
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| ||||| ||||| || |||||||||||
Sbjct: 279 tttcttaatctcatggcaaggaagatgaaggataccgattctgaagaggagctcaaggaa 338
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || || || || || ||||| || |||
Sbjct: 339 gcattccgtgtttttgacaaggatcaaaatggttttatatctgctgctgagctacgtcat 398
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||||| || || || ||||| || |||
Sbjct: 399 gtcatgacaaacctcggagagaagcttactgatgaggaagtggatgaaatgattcgggag 458
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|||||||| ||||||||||| || || || || ||||| ||||| || || ||||||||
Sbjct: 459 gctgatgtggatggtgatggacaaatcaattatgaggaatttgtgaaagttatgatggca 518
Query: 654 aagtga 659
||||||
Sbjct: 519 aagtga 524
>gb|CX645983.1|CX645983 COLD1_6_B10.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_6_B10_A029 5', mRNA sequence
Length = 715
Score = 234 bits (118), Expect = 6e-060
Identities = 349/426 (81%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 95 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 154
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || ||||| |||||||| || |||
Sbjct: 155 acaacaaaagaactggggactgtaatgcgttctctaggtcaaaatcctacagaagcagag 214
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
||||| |||||||| ||||| || ||||| |||||||| || ||||| |||||||| |||
Sbjct: 215 ctccaagacatgataaatgaagttgatgcagatggcaatggtaccattgattttcctgag 274
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| ||||| ||||| || |||||||||||
Sbjct: 275 tttcttaatctcatggcaaggaagatgaaggataccgattctgaagaggagctcaaggaa 334
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || || || || || ||||| || |||
Sbjct: 335 gcattccgtgtttttgacaaggatcaaaatggttttatatctgctgctgagctacgtcat 394
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||||| || || || ||||| || |||
Sbjct: 395 gtcatgacaaacctcggagagaagcttactgatgaggaagtggatgaaatgattcgggag 454
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|||||||| ||||||||||| || || || || ||||| ||||| || || ||||||||
Sbjct: 455 gctgatgtggatggtgatggacaaatcaattatgaggaatttgtgaaagttatgatggca 514
Query: 654 aagtga 659
||||||
Sbjct: 515 aagtga 520
>gb|CX649008.1|CX649008 COLD1_32_H01.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_32_H01_A029 3', mRNA sequence
Length = 796
Score = 234 bits (118), Expect = 6e-060
Identities = 349/426 (81%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 78 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 137
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || ||||| |||||||| || |||
Sbjct: 138 acaacaaaagaactggggactgtaatgcgttctctaggtcaaaatcctacagaagcagag 197
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
||||| |||||||| ||||| || ||||| |||||||| || ||||| |||||||| |||
Sbjct: 198 ctccaagacatgataaatgaagttgatgcagatggcaatggtaccattgattttcctgag 257
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| ||||| ||||| || |||||||||||
Sbjct: 258 tttcttaatctcatggcaaggaagatgaaggataccgattctgaagaggagctcaaggaa 317
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || || || || || ||||| || |||
Sbjct: 318 gcattccgtgtttttgacaaggatcaaaatggttttatatctgctgctgagctacgtcat 377
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||||| || || || ||||| || |||
Sbjct: 378 gtcatgacaaacctcggagagaagcttactgatgaggaagtggatgaaatgattcgggag 437
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|||||||| ||||||||||| || || || || ||||| ||||| || || ||||||||
Sbjct: 438 gctgatgtggatggtgatggacaaatcaattatgaggaatttgtgaaagttatgatggca 497
Query: 654 aagtga 659
||||||
Sbjct: 498 aagtga 503
>gb|DR010916.1|DR010916 HEAT1_2_D02.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_2_D02_A029 3', mRNA sequence
Length = 765
Score = 234 bits (118), Expect = 6e-060
Identities = 349/426 (81%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 45 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 104
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || ||||| |||||||| || |||
Sbjct: 105 acaacaaaagaactggggactgtaatgcgttctctaggtcaaaatcctacagaagcagag 164
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
||||| |||||||| ||||| || ||||| |||||||| || ||||| |||||||| |||
Sbjct: 165 ctccaagacatgataaatgaagttgatgcagatggcaatggtaccattgattttcctgag 224
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| ||||| ||||| || |||||||||||
Sbjct: 225 tttcttaatctcatggcaaggaagatgaaggataccgattctgaagaggagctcaaggaa 284
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || || || || || ||||| || |||
Sbjct: 285 gcattccgtgtttttgacaaggatcaaaatggttttatatctgctgctgagctacgtcat 344
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||||| || || || ||||| || |||
Sbjct: 345 gtcatgacaaacctcggagagaagcttactgatgaggaagtggatgaaatgattcgggag 404
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|||||||| ||||||||||| || || || || ||||| ||||| || || ||||||||
Sbjct: 405 gctgatgtggatggtgatggacaaatcaattatgaggaatttgtgaaagttatgatggca 464
Query: 654 aagtga 659
||||||
Sbjct: 465 aagtga 470
>gb|DR011123.1|DR011123 HEAT1_3_D02.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_3_D02_A029 5', mRNA sequence
Length = 538
Score = 234 bits (118), Expect = 6e-060
Identities = 349/426 (81%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 62 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 121
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || ||||| |||||||| || |||
Sbjct: 122 acaacaaaagaactggggactgtaatgcgttctctaggtcaaaatcctacagaagcagag 181
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
||||| |||||||| ||||| || ||||| |||||||| || ||||| |||||||| |||
Sbjct: 182 ctccaagacatgataaatgaagttgatgcagatggcaatggtaccattgattttcctgag 241
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| ||||| ||||| || |||||||||||
Sbjct: 242 tttcttaatctcatggcaaggaagatgaaggataccgattctgaagaggagctcaaggaa 301
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || || || || || ||||| || |||
Sbjct: 302 gcattccgtgtttttgacaaggatcaaaatggttttatatctgctgctgagctacgtcat 361
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||||| || || || ||||| || |||
Sbjct: 362 gtcatgacaaacctcggagagaagcttactgatgaggaagtggatgaaatgattcgggag 421
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|||||||| ||||||||||| || || || || ||||| ||||| || || ||||||||
Sbjct: 422 gctgatgtggatggtgatggacaaatcaattatgaggaatttgtgaaagttatgatggca 481
Query: 654 aagtga 659
||||||
Sbjct: 482 aagtga 487
>gb|AW869909.1|AW869909 NXNV_122_H10_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_122_H10 5' similar to Arabidopsis thaliana
sequence At3g43810 calmodulin 7 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 604
Score = 222 bits (112), Expect = 2e-056
Identities = 313/380 (82%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 108 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 167
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || ||||| |||||||| || |||
Sbjct: 168 acaacaaaagaactggggactgtaatgcgttctctaggtcaaaatcctacagaagcagag 227
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
||||| |||||||| ||||| || ||||| |||||||| || ||||| |||||||| |||
Sbjct: 228 ctccaagacatgataaatgaagttgatgcagatggcaatggtaccattgattttcctgag 287
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| ||||| ||||| || |||||||||||
Sbjct: 288 tttcttaatctcatggcaaggaagatgaaggataccgattctgaagaggagctcaaggaa 347
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || || || || || ||||| || |||
Sbjct: 348 gcattccgtgtttttgacaaggatcaaaatggttttatatctgctgctgagctacgtcat 407
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||||| || || || ||||| || |||
Sbjct: 408 gtcatgacaaacctcggagagaagcttactgatgaggaagtggatgaaatgattcgggag 467
Query: 594 gctgatgtcgatggtgatgg 613
|||||||| |||||||||||
Sbjct: 468 gctgatgtggatggtgatgg 487
>gb|BX250558.1|BX250558 BX250558 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP038E04 similar to CALMODULIN, mRNA sequence
Length = 673
Score = 218 bits (110), Expect = 3e-055
Identities = 347/426 (81%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 77 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 136
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || ||||| |||||||| || |||
Sbjct: 137 acaacaaaagaactggggactgtaatgcgttctctaggtcaaaatcctacagaagcagag 196
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
||||| |||||||| ||||| || ||||| |||||||| || ||||| |||||||| |||
Sbjct: 197 ctccaagacatgataaatgaagttgatgcagatggcaatggtaccattgattttcctgag 256
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| || || ||||| || ||||| |||||
Sbjct: 257 tttcttaatctcatggcgaggaagatgaaggatactgattctgaagaggagctgaaggaa 316
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || ||||| || || ||||| || |||
Sbjct: 317 gcattccgtgtttttgacaaggatcaaaatggttttatctctgctgctgagctacgtcat 376
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||||| || || || ||||| || |||
Sbjct: 377 gtcatgacaaacctcggagagaagcttactgatgaggaagtggatgaaatgattcgggag 436
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|||||||| ||||| ||||| || || || || ||||| ||||| || || ||||||||
Sbjct: 437 gctgatgtggatggagatggacaaatcaattatgaggaatttgtgaaagttatgatggca 496
Query: 654 aagtga 659
||||||
Sbjct: 497 aagtga 502
>gb|BX251181.1|BX251181 BX251181 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP046D03 similar to CALMODULIN, mRNA sequence
Length = 676
Score = 218 bits (110), Expect = 3e-055
Identities = 347/426 (81%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 129 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 188
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || ||||| |||||||| || |||
Sbjct: 189 acaacaaaagaactggggactgtaatgcgttctctaggtcaaaatcctacagaagcagag 248
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
||||| |||||||| ||||| || ||||| |||||||| || ||||| |||||||| |||
Sbjct: 249 ctccaagacatgataaatgaagttgatgcagatggcaatggtaccattgattttcctgag 308
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| || || ||||| || ||||| |||||
Sbjct: 309 tttcttaatctcatggcgaggaagatgaaggatactgattctgaagaggagctgaaggaa 368
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || ||||| || || ||||| || |||
Sbjct: 369 gcattccgtgtttttgacaaggatcaaaatggttttatctctgctgctgagctacgtcat 428
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||||| || || || ||||| || |||
Sbjct: 429 gtcatgacaaacctcggagagaagcttactgatgaggaagtggatgaaatgattcgggag 488
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|||||||| ||||| ||||| || || || || ||||| ||||| || || ||||||||
Sbjct: 489 gctgatgtggatggagatggacaaatcaattatgaggaatttgtgaaagttatgatggca 548
Query: 654 aagtga 659
||||||
Sbjct: 549 aagtga 554
>gb|BX251352.1|BX251352 BX251352 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP048F01 similar to CALMODULIN, mRNA sequence
Length = 675
Score = 218 bits (110), Expect = 3e-055
Identities = 347/426 (81%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 117 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 176
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || ||||| |||||||| || |||
Sbjct: 177 acaacaaaagaactggggactgtaatgcgttctctaggtcaaaatcctacagaagcagag 236
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
||||| |||||||| ||||| || ||||| |||||||| || ||||| |||||||| |||
Sbjct: 237 ctccaagacatgataaatgaagttgatgcagatggcaatggtaccattgattttcctgag 296
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| || || ||||| || ||||| |||||
Sbjct: 297 tttcttaatctcatggcgaggaagatgaaggatactgattctgaagaggagctgaaggaa 356
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || ||||| || || ||||| || |||
Sbjct: 357 gcattccgtgtttttgacaaggatcaaaatggttttatctctgctgctgagctacgtcat 416
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||||| || || || ||||| || |||
Sbjct: 417 gtcatgacaaacctcggagagaagcttactgatgaggaagtggatgaaatgattcgggag 476
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|||||||| ||||| ||||| || || || || ||||| ||||| || || ||||||||
Sbjct: 477 gctgatgtggatggagatggacaaatcaattatgaggaatttgtgaaagttatgatggca 536
Query: 654 aagtga 659
||||||
Sbjct: 537 aagtga 542
>gb|BX252911.1|BX252911 BX252911 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP074G06 similar to CALMODULIN, mRNA sequence
Length = 552
Score = 218 bits (110), Expect = 3e-055
Identities = 347/426 (81%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 34 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 93
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || ||||| |||||||| || |||
Sbjct: 94 acaacaaaagaactggggactgtaatgcgttctctaggtcaaaatcctacagaagcagag 153
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
||||| |||||||| ||||| || ||||| |||||||| || ||||| |||||||| |||
Sbjct: 154 ctccaagacatgataaatgaagttgatgcagatggcaatggtaccattgattttcctgag 213
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| || || ||||| || ||||| |||||
Sbjct: 214 tttcttaatctcatggcgaggaagatgaaggatactgattctgaagaggagctgaaggaa 273
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || ||||| || || ||||| || |||
Sbjct: 274 gcattccgtgtttttgacaaggatcaaaatggttttatctctgctgctgagctacgtcat 333
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||||| || || || ||||| || |||
Sbjct: 334 gtcatgacaaacctcggagagaagcttactgatgaggaagtggatgaaatgattcgggag 393
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|||||||| ||||| ||||| || || || || ||||| ||||| || || ||||||||
Sbjct: 394 gctgatgtggatggagatggacaaatcaattatgaggaatttgtgaaagttatgatggca 453
Query: 654 aagtga 659
||||||
Sbjct: 454 aagtga 459
>gb|BQ633732.1|BQ633732 NXRV060_A09_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV060_A09 5' similar to Arabidopsis thaliana
sequence At3g43810 calmodulin 7 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 719
Score = 218 bits (110), Expect = 3e-055
Identities = 347/426 (81%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 116 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 175
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || ||||| |||||||| || |||
Sbjct: 176 acaacaaaagaactggggactgtaatgcgttctctaggtcaaaatcctacagaagcagag 235
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
||||| || ||||| ||||| || || || |||||||| || ||||| |||||||| |||
Sbjct: 236 ctccaagatatgataaatgaagttgacgcagatggcaatggtaccattgattttcctgag 295
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| || || ||||| || |||||||||||
Sbjct: 296 tttcttaatctcatggcaaggaagatgaaggatactgattctgaagaggagctcaaggaa 355
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || ||||| || || ||||| || |||
Sbjct: 356 gcattccgtgtttttgacaaggatcaaaatggttttatctctgctgctgagctacgtcat 415
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||||| || || || ||||| || |||
Sbjct: 416 gtcatgacaaacctcggagagaagcttactgatgaggaagtggatgaaatgattcgggag 475
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|||||||| ||||||||||| || || || || ||||| ||||| || || ||||||||
Sbjct: 476 gctgatgtggatggtgatggacaaatcaattatgaggaatttgtgaaagttatgatggca 535
Query: 654 aagtga 659
||||||
Sbjct: 536 aagtga 541
>gb|BX680125.1|BX680125 BX680125 RS Pinus pinaster cDNA clone RS39E10, mRNA sequence
Length = 600
Score = 218 bits (110), Expect = 3e-055
Identities = 347/426 (81%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 96 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 155
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || ||||| |||||||| || |||
Sbjct: 156 acaacaaaagaactggggactgtaatgcgttctctaggtcaaaatcctacagaagcagag 215
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
||||| |||||||| ||||| || ||||| |||||||| || ||||| |||||||| |||
Sbjct: 216 ctccaagacatgataaatgaagttgatgcagatggcaatggtaccattgattttcctgag 275
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| || || ||||| || ||||| |||||
Sbjct: 276 tttcttaatctcatggcgaggaagatgaaggatactgattctgaagaggagctgaaggaa 335
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || ||||| || || ||||| || |||
Sbjct: 336 gcattccgtgtttttgacaaggatcaaaatggttttatctctgctgctgagctacgtcat 395
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||||| || || || ||||| || |||
Sbjct: 396 gtcatgacaaacctcggagagaagcttactgatgaggaagtggatgaaatgattcgggag 455
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|||||||| ||||| ||||| || || || || ||||| ||||| || || ||||||||
Sbjct: 456 gctgatgtggatggagatggacaaatcaattatgaggaatttgtgaaagttatgatggca 515
Query: 654 aagtga 659
||||||
Sbjct: 516 aagtga 521
>gb|CX645322.1|CX645322 COLD1_2_A02.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_2_A02_A029 3', mRNA sequence
Length = 722
Score = 218 bits (110), Expect = 3e-055
Identities = 347/426 (81%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 36 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 95
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || ||||| |||||||| || |||
Sbjct: 96 acaacaaaagaactggggactgtaatgcgttctctaggtcaaaatcctacagaagcagag 155
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
||||| || ||||| ||||| || || || |||||||| || ||||| |||||||| |||
Sbjct: 156 ctccaagatatgataaatgaagttgacgcagatggcaatggtaccattgattttcctgag 215
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| || || ||||| || |||||||||||
Sbjct: 216 tttcttaatctcatggcaaggaagatgaaggatactgattctgaagaggagctcaaggaa 275
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || ||||| || || ||||| || |||
Sbjct: 276 gcattccgtgtttttgacaaggatcaaaatggttttatctctgctgctgagctacgtcat 335
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||||| || || || ||||| || |||
Sbjct: 336 gtcatgacaaacctcggagagaagcttactgatgaggaagtggatgaaatgattcgggag 395
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|||||||| ||||||||||| || || || || ||||| ||||| || || ||||||||
Sbjct: 396 gctgatgtggatggtgatggacaaatcaattatgaggaatttgtgaaagttatgatggca 455
Query: 654 aagtga 659
||||||
Sbjct: 456 aagtga 461
>gb|DR011059.1|DR011059 HEAT1_3_D02.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_3_D02_A029 3', mRNA sequence
Length = 714
Score = 218 bits (110), Expect = 3e-055
Identities = 338/414 (81%)
Strand = Plus / Plus
Query: 246 ttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatcacgaccaaggag 305
||||||||||| |||||| | || |||||||| ||| ||| || ||||| || || ||
Sbjct: 3 ttcaaggaggctttcagcttatttgacaaggatgggactggatgtatcacaacaaaagaa 62
Query: 306 ctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgagctccaggacatg 365
||||| ||||| |||||||| || || ||||| |||||||| || |||||||| ||||||
Sbjct: 63 ctggggactgtaatgcgttctctaggtcaaaatcctacagaagcagagctccaagacatg 122
Query: 366 atcaatgaggtcgatgccgatggcaacggcaccatcgattttccagagtttctgaacctt 425
|| ||||| || ||||| |||||||| || ||||| |||||||| |||||||| || ||
Sbjct: 123 ataaatgaagttgatgcagatggcaatggtaccattgattttcctgagtttcttaatctc 182
Query: 426 atggctcgcaagatgaaggacaccgactctgaggaagagctcaaggaggcctttcgtgtg 485
||||| | ||||||||||| ||||| ||||| || ||||||||||| || || |||||
Sbjct: 183 atggcaaggaagatgaaggataccgattctgaagaggagctcaaggaagcattccgtgtt 242
Query: 486 tttgacaaggaccagaacggcttcatctccgccgccgagctccgccatgtcatgacaaat 545
||||||||||| || || || || || || || || ||||| || ||||||||||||||
Sbjct: 243 tttgacaaggatcaaaatggttttatatctgctgctgagctacgtcatgtcatgacaaac 302
Query: 546 cttggggagaagctaactgatgaggaggtagacgagatgatccgtgaggctgatgtcgat 605
|| || |||||||| ||||||||||| || || || ||||| || ||||||||||| |||
Sbjct: 303 ctcggagagaagcttactgatgaggaagtggatgaaatgattcgggaggctgatgtggat 362
Query: 606 ggtgatggccagattaactacgaggagtttgttaaggtcatgatggccaagtga 659
|||||||| || || || || ||||| ||||| || || |||||||| ||||||
Sbjct: 363 ggtgatggacaaatcaattatgaggaatttgtgaaagttatgatggcaaagtga 416
>gb|DR056985.1|DR056985 RTNIT1_1_G06.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_1_G06_A029 5', mRNA sequence
Length = 773
Score = 218 bits (110), Expect = 3e-055
Identities = 347/426 (81%)
Strand = Plus / Minus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 674 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 615
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || ||||| |||||||| || |||
Sbjct: 614 acaacaaaagaactggggactgtaatgcgttctctaggtcaaaatcctacagaagcagag 555
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
||||| || ||||| ||||| || || || |||||||| || ||||| |||||||| |||
Sbjct: 554 ctccaagatatgataaatgaagttgacgcagatggcaatggtaccattgattttcctgag 495
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| || || ||||| || |||||||||||
Sbjct: 494 tttcttaatctcatggcaaggaagatgaaggatactgattctgaagaggagctcaaggaa 435
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || ||||| || || ||||| || |||
Sbjct: 434 gcattccgtgtttttgacaaggatcaaaatggttttatctctgctgctgagctacgtcat 375
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||||| || || || ||||| || |||
Sbjct: 374 gtcatgacaaacctcggagagaagcttactgatgaggaagtggatgaaatgattcgggag 315
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|||||||| ||||||||||| || || || || ||||| ||||| || || ||||||||
Sbjct: 314 gctgatgtggatggtgatggacaaatcaattatgaggaatttgtgaaagttatgatggca 255
Query: 654 aagtga 659
||||||
Sbjct: 254 aagtga 249
>gb|BQ699396.1|BQ699396 NXRV127_C09_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV127_C09 5' similar to Arabidopsis thaliana
sequence At3g43810 calmodulin 7 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 543
Score = 214 bits (108), Expect = 5e-054
Identities = 312/380 (82%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 117 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 176
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || ||||| |||||||| || |||
Sbjct: 177 acaacaaaagaactggggactgtaatgcgttctctaggtcaaaatcctacagaagcagag 236
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
||||| |||||||| ||||| || ||||| |||||||| || ||||| |||||||| |||
Sbjct: 237 ctccaagacatgataaatgaagttgatgcagatggcaatggtaccattgattttcctgag 296
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| ||||| ||||| || |||||||||||
Sbjct: 297 tttcttaatctcatggcaaggaagatgaaggataccgattctgaagaggagctcaaggaa 356
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || || || || || ||||| || |||
Sbjct: 357 gcattccgtgtttttgacaaggatcaaaatggttttatatctgctgctgagctacgtcat 416
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||||| || || || ||||| || |||
Sbjct: 417 gtcatgacaaacctcggagagaagcttactgatgaggaagtggatgaaatgattcgggag 476
Query: 594 gctgatgtcgatggtgatgg 613
|||||||| ||||| |||||
Sbjct: 477 gctgatgtggatggcgatgg 496
>gb|BQ701100.1|BQ701100 NXRV115_F02_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV115_F02 5' similar to Arabidopsis thaliana
sequence At3g43810 calmodulin 7 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 555
Score = 212 bits (107), Expect = 2e-053
Identities = 310/378 (82%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 127 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 186
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || ||||| |||||||| || |||
Sbjct: 187 acaacaaaagaactggggactgtaatgcgttctctaggtcaaaatcctacagaagcagag 246
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
||||| |||||||| ||||| || ||||| |||||||| || ||||| |||||||| |||
Sbjct: 247 ctccaagacatgataaatgaagttgatgcagatggcaatggtaccattgattttcctgag 306
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| ||||| ||||| || |||||||||||
Sbjct: 307 tttcttaatctcatggcaaggaagatgaaggataccgattctgaagaggagctcaaggaa 366
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || || || || || ||||| || |||
Sbjct: 367 gcattccgtgtttttgacaaggatcaaaatggttttatatctgctgctgagctacgtcat 426
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||||| || || || ||||| || | |
Sbjct: 427 gtcatgacaaacctcggagagaagcttactgatgaggaagtggatgaaatgattcgggng 486
Query: 594 gctgatgtcgatggtgat 611
|||||||| |||||||||
Sbjct: 487 gctgatgtggatggtgat 504
>gb|BG040535.1|BG040535 NXSI_112_C08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_112_C08 5' similar to Arabidopsis thaliana
sequence At3g43810 calmodulin 7 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 514
Score = 208 bits (105), Expect = 3e-052
Identities = 339/417 (81%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 98 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 157
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || ||||| |||||||| || |||
Sbjct: 158 acaacaaaagaactggggactgtaatgcgttctctaggtcaaaatcctacagaagcagag 217
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
||||| || ||||| ||||| || || || |||||||| || ||||| |||||||| |||
Sbjct: 218 ctccaagatatgataaatgaagttgacgcagatggcaatggtaccattgattttcctgag 277
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| || || ||||| || |||||||||||
Sbjct: 278 tttcttaatctcatggcaaggaagatgaaggatactgattctgaagaggagctcaaggaa 337
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || ||||| || || ||||| || |||
Sbjct: 338 gcattccgtgtttttgacaaggatcaaaatggttttatctctgctgctgagctacgtcat 397
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||||| || || || ||||| || |||
Sbjct: 398 gtcatgacaaacctcggagagaagcttactgatgaggaagtggatgaaatgattcgggag 457
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatg 650
|||||||| ||||||||||| || || || || ||||| ||||| || || ||||||
Sbjct: 458 gctgatgtggatggtgatggacaaatcaattatgaggaatttgtgaaagttatgatg 514
>gb|BQ696679.1|BQ696679 NXPV_044_A09_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_044_A09 5' similar to Arabidopsis
thaliana sequence At3g43810 calmodulin 7 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 564
Score = 206 bits (104), Expect = 1e-051
Identities = 311/380 (81%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 110 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 169
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || ||||| |||||||| || |||
Sbjct: 170 acaacaaaagaactggggactgtaatgcgttctctaggtcaaaatcctacagaagcagag 229
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
||||| || ||||| ||||| || || || |||||||| || ||||| |||||||| |||
Sbjct: 230 ctccaagatatgataaatgaagttgacgcagatggcaatggtaccattgattttcctgag 289
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| || || ||||| || |||||||||||
Sbjct: 290 tttcttaatctcatggcaaggaagatgaaggatactgattctgaagaggagctcaaggaa 349
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || ||||| || || ||||| || |||
Sbjct: 350 gcattccgtgtttttgacaaggatcaaaatggttttatctctgctgctgagctacgtcat 409
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||||| || || || ||||| || |||
Sbjct: 410 gtcatgacaaacctcggagagaagcttactgatgaggaagtggatgaaatgattcgggag 469
Query: 594 gctgatgtcgatggtgatgg 613
|||||||| |||||||||||
Sbjct: 470 gctgatgtggatggtgatgg 489
>gb|DR056905.1|DR056905 RTNIT1_1_G06.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_1_G06_A029 3', mRNA sequence
Length = 765
Score = 206 bits (104), Expect = 1e-051
Identities = 347/427 (81%), Gaps = 1/427 (0%)
Strand = Plus / Minus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 630 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 571
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || ||||| |||||||| || |||
Sbjct: 570 acaacaaaagaactggggactgtaatgcgttctctaggtcaaaatcctacagaagcagag 511
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
||||| || ||||| ||||| || || || |||||||| || ||||| |||||||| |||
Sbjct: 510 ctccaagatatgataaatgaagttgacgcagatggcaatggtaccattgattttcctgag 451
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| || || ||||| || |||||||||||
Sbjct: 450 tttcttaatctcatggcaaggaagatgaaggatactgattctgaagaggagctcaaggaa 391
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || ||||| || || ||||| || |||
Sbjct: 390 gcattccgtgtttttgacaaggatcaaaatggttttatctctgctgctgagctacgtcat 331
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||||| || || || ||||| || |||
Sbjct: 330 gtcatgacaaacctcggagagaagcttactgatgaggaagtggatgaaatgattcgggag 271
Query: 594 gctgatgtc-gatggtgatggccagattaactacgaggagtttgttaaggtcatgatggc 652
|||||||| ||||||||||| || || || || ||||| ||||| || || ||||||||
Sbjct: 270 gctgatgtnggatggtgatggacaaatcaattatgaggaatttgtgaaagttatgatggc 211
Query: 653 caagtga 659
||||||
Sbjct: 210 aaagtga 204
>gb|CO160684.1|CO160684 FLD1_23_F08.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_23_F08_A029 3', mRNA sequence
Length = 639
Score = 202 bits (102), Expect = 2e-050
Identities = 345/426 (80%)
Strand = Plus / Minus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 504 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 445
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || || || |||||||| || |||
Sbjct: 444 acaacaaaagaactggggactgtaatgcgttctctaggtcagaatcctacagaagcagag 385
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|||| || ||||| ||||| || || || |||||||| || ||||| |||||||| |||
Sbjct: 384 ctccgagatatgataaatgaagttgacgcagatggcaatggtaccattgattttcctgag 325
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| || || ||||| || |||||||||||
Sbjct: 324 tttcttaatctcatggcaaggaagatgaaggatactgattctgaagaggagctcaaggaa 265
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || ||||| || || ||||| || |||
Sbjct: 264 gcattccgtgtttttgacaaggatcaaaatggttttatctctgctgctgagctacgtcat 205
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||||| || || || ||||| || |||
Sbjct: 204 gtcatgacaaacctcggagagaagcttactgatgaggaagtggatgaaatgattcgggag 145
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|||||||| ||||||||||| || || || || ||||| ||||| || || ||||||||
Sbjct: 144 gctgatgtggatggtgatggacaaatcaattatgaggaatttgtgaaagttatgatggca 85
Query: 654 aagtga 659
||||||
Sbjct: 84 aagtga 79
>gb|AW225786.1|AW225786 ST71G06 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST71G06, mRNA sequence
Length = 501
Score = 194 bits (98), Expect = 5e-048
Identities = 309/380 (81%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| |||| ||||||||||| |||||| | || |||||||| ||||| || || |||
Sbjct: 23 cagatctccgaattcaaggaggctttcagcttatttgacaaggatggggacggatgtatc 82
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || || || ||||| ||||| |||||||| || || ||||| |||||||| || |||
Sbjct: 83 acaacaaaagaactggggactgtaatgcgttctctaggtcaaaatcctacagaagcagag 142
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
||||| || ||||| ||||| || || || |||||||| || ||||| |||||||| |||
Sbjct: 143 ctccaagatatgataaatgaagttgacgcagatggcaatggtaccattgattttcctgag 202
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
||||| || || ||||| | ||||||||||| || || ||||| || |||||||||||
Sbjct: 203 tttcttaatctcatggcaaggaagatgaaggatactgattctgaagaggagctcaaggaa 262
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || ||||| ||||||||||| || || || || ||||| || || ||||| || |||
Sbjct: 263 gcattccgtgtttttgacaaggatcaaaatggttttatctctgctgctgagctacgtcat 322
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
||||||||||| || || |||||||| ||||||||| | || || || ||||| | |||
Sbjct: 323 gtcatgacaaacctcggagagaagcttactgatgagnaagtggatgaaatgattcnggag 382
Query: 594 gctgatgtcgatggtgatgg 613
|||||||| |||||||||||
Sbjct: 383 gctgatgtggatggtgatgg 402
>gb|BX250427.1|BX250427 BX250427 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP036G06 similar to CALMODULIN, mRNA sequence
Length = 488
Score = 194 bits (98), Expect = 5e-048
Identities = 344/426 (80%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| | |||||||||||||| |||||| | || |||||||| || || || || |||
Sbjct: 17 cagatctctgagttcaaggaggctttcagcttgtttgacaaggatggagacggatgtatc 76
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || |||||||| || || || |||||||| |||| |||||||| || || || |||
Sbjct: 77 acaacaaaggagcttgggacagtaatgcgttctttgggtcaaaacccgactgaagcagag 136
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|| || || ||||| |||||||| || || ||||| || || ||||| || ||| | |||
Sbjct: 137 ctgcaagatatgataaatgaggttgacgcagatggtaatggtaccattgactttgccgag 196
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
|| || || || ||||| || || |||||||||| || ||||| |||||||| |||||
Sbjct: 197 ttcctaaatctcatggcacggaaagtgaaggacactgattctgaagaagagctgaaggaa 256
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| ||||| || || |||||||||||||| || ||||| || || |||||||| |||||
Sbjct: 257 gcatttcgggttttcgacaaggaccagaatggtttcatatctgctgccgagctacgccac 316
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
|||||||||||| | ||||| || || |||||||| || || || |||||||| || |||
Sbjct: 317 gtcatgacaaatttaggggaaaaactcactgatgacgaagttgatgagatgattcgggag 376
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|| ||||| ||||||||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct: 377 gccgatgtggatggtgatggacaaattaactatgaggaatttgtcaaagtaatgatggcc 436
Query: 654 aagtga 659
||||||
Sbjct: 437 aagtga 442
>gb|BX251632.1|BX251632 BX251632 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP053C09 similar to CALMODULIN, mRNA sequence
Length = 699
Score = 194 bits (98), Expect = 5e-048
Identities = 344/426 (80%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| | |||||||||||||| |||||| | || |||||||| || || || || |||
Sbjct: 159 cagatctctgagttcaaggaggctttcagcttgtttgacaaggatggagacggatgtatc 218
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || |||||||| || || || |||||||| |||| |||||||| || || || |||
Sbjct: 219 acaacaaaggagcttgggacagtaatgcgttctttgggtcaaaacccgactgaagcagag 278
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|| || || ||||| |||||||| || || ||||| || || ||||| || ||| | |||
Sbjct: 279 ctgcaagatatgataaatgaggttgacgcagatggtaatggtaccattgactttgccgag 338
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
|| || || || ||||| || || |||||||||| || ||||| |||||||| |||||
Sbjct: 339 ttcctaaatctcatggcacggaaagtgaaggacactgattctgaagaagagctgaaggaa 398
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| ||||| || || |||||||||||||| || ||||| || || |||||||| |||||
Sbjct: 399 gcatttcgggttttcgacaaggaccagaatggtttcatatctgctgccgagctacgccac 458
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
|||||||||||| | ||||| || || |||||||| || || || |||||||| || |||
Sbjct: 459 gtcatgacaaatttaggggaaaaactcactgatgacgaagttgatgagatgattcgggag 518
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|| ||||| ||||||||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct: 519 gccgatgtggatggtgatggacaaattaactatgaggaatttgtcaaagtaatgatggcc 578
Query: 654 aagtga 659
||||||
Sbjct: 579 aagtga 584
>gb|BX252969.1|BX252969 BX252969 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP075G11 similar to CALMODULIN, mRNA sequence
Length = 661
Score = 194 bits (98), Expect = 5e-048
Identities = 344/426 (80%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| | |||||||||||||| |||||| | || |||||||| || || || || |||
Sbjct: 103 cagatctctgagttcaaggaggctttcagcttgtttgacaaggatggagacggatgtatc 162
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || |||||||| || || || |||||||| |||| |||||||| || || || |||
Sbjct: 163 acaacaaaggagcttgggacagtaatgcgttctttgggtcaaaacccgactgaagcagag 222
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|| || || ||||| |||||||| || || ||||| || || ||||| || ||| | |||
Sbjct: 223 ctgcaagatatgataaatgaggttgacgcagatggtaatggtaccattgactttgccgag 282
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
|| || || || ||||| || || |||||||||| || ||||| |||||||| |||||
Sbjct: 283 ttcctaaatctcatggcacggaaagtgaaggacactgattctgaagaagagctgaaggaa 342
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| ||||| || || |||||||||||||| || ||||| || || |||||||| |||||
Sbjct: 343 gcatttcgggttttcgacaaggaccagaatggtttcatatctgctgccgagctacgccac 402
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
|||||||||||| | ||||| || || |||||||| || || || |||||||| || |||
Sbjct: 403 gtcatgacaaatttaggggaaaaactcactgatgacgaagttgatgagatgattcgggag 462
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|| ||||| ||||||||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct: 463 gccgatgtggatggtgatggacaaattaactatgaggaatttgtcaaagtaatgatggcc 522
Query: 654 aagtga 659
||||||
Sbjct: 523 aagtga 528
>gb|CF395792.1|CF395792 RTDS2_17_C02.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_17_C02_A021 5', mRNA sequence
Length = 784
Score = 194 bits (98), Expect = 5e-048
Identities = 344/426 (80%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| | |||||||||||||| |||||| | || |||||||| || || || || |||
Sbjct: 296 cagatctctgagttcaaggaggctttcagcttgtttgacaaggatggagacggatgtatc 355
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || |||||||| || || || |||||||| |||| |||||||| || || || |||
Sbjct: 356 acaacaaaggagcttgggacagtaatgcgttctttgggtcaaaacccaactgaagcagag 415
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|| || || ||||| |||||||| || || ||||| || || ||||| || ||| | |||
Sbjct: 416 ctgcaagatatgataaatgaggttgacgcagatggtaatggtaccattgactttgccgag 475
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
|| || || || ||||| || || |||||||||| || ||||| |||||||| |||||
Sbjct: 476 ttcctaaatctcatggcacggaaagtgaaggacactgattctgaagaagagctgaaggaa 535
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || || || || |||||||||||||| || ||||| || || |||||||| |||||
Sbjct: 536 gcattccgggttttcgacaaggaccagaatggtttcatatctgctgccgagctacgccac 595
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
|||||||||||| | ||||| || || ||||||||||| || || |||||||| || |||
Sbjct: 596 gtcatgacaaatttaggggaaaaactcactgatgaggaagttgatgagatgattcgggag 655
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|| ||||| ||||||||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct: 656 gccgatgtggatggtgatggacaaattaactatgaggaatttgtcaaagtaatgatggcc 715
Query: 654 aagtga 659
||||||
Sbjct: 716 aagtga 721
>gb|CF396165.1|CF396165 RTDS2_15_A03.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_15_A03_A021 5', mRNA sequence
Length = 716
Score = 194 bits (98), Expect = 5e-048
Identities = 344/426 (80%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| | |||||||||||||| |||||| | || |||||||| || || || || |||
Sbjct: 80 cagatctctgagttcaaggaggctttcagcttgtttgacaaggatggagacggatgtatc 139
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || |||||||| || || || |||||||| |||| |||||||| || || || |||
Sbjct: 140 acaacaaaggagcttgggacagtaatgcgttctttgggtcaaaacccaactgaagcagag 199
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|| || || ||||| |||||||| || || ||||| || || ||||| || ||| | |||
Sbjct: 200 ctgcaagatatgataaatgaggttgacgcagatggtaatggtaccattgactttgccgag 259
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
|| || || || ||||| || || |||||||||| || ||||| |||||||| |||||
Sbjct: 260 ttcctaaatctcatggcacggaaagtgaaggacactgattctgaagaagagctgaaggaa 319
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || || || || |||||||||||||| || ||||| || || |||||||| |||||
Sbjct: 320 gcattccgggttttcgacaaggaccagaatggtttcatatctgctgccgagctacgccac 379
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
|||||||||||| | ||||| || || ||||||||||| || || |||||||| || |||
Sbjct: 380 gtcatgacaaatttaggggaaaaactcactgatgaggaagttgatgagatgattcgggag 439
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|| ||||| ||||||||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct: 440 gccgatgtggatggtgatggacaaattaactatgaggaatttgtcaaagtaatgatggcc 499
Query: 654 aagtga 659
||||||
Sbjct: 500 aagtga 505
>gb|CF477915.1|CF477915 RTWW3_13_D06.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_13_D06_A022 5', mRNA sequence
Length = 717
Score = 194 bits (98), Expect = 5e-048
Identities = 344/426 (80%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| | |||||||||||||| |||||| | || |||||||| || || || || |||
Sbjct: 226 cagatctctgagttcaaggaggctttcagcttgtttgacaaggatggagacggatgtatc 285
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || |||||||| || || || |||||||| |||| |||||||| || || || |||
Sbjct: 286 acaacaaaggagcttgggacagtaatgcgttctttgggtcaaaacccaactgaagcagag 345
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|| || || ||||| |||||||| || || ||||| || || ||||| || ||| | |||
Sbjct: 346 ctgcaagatatgataaatgaggttgacgcagatggtaatggtaccattgactttgccgag 405
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
|| || || || ||||| || || |||||||||| || ||||| |||||||| |||||
Sbjct: 406 ttcctaaatctcatggcacggaaagtgaaggacactgattctgaagaagagctgaaggaa 465
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || || || || |||||||||||||| || ||||| || || |||||||| |||||
Sbjct: 466 gcattccgggttttcgacaaggaccagaatggtttcatatctgctgccgagctacgccac 525
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
|||||||||||| | ||||| || || ||||||||||| || || |||||||| || |||
Sbjct: 526 gtcatgacaaatttaggggaaaaactcactgatgaggaagttgatgagatgattcgggag 585
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|| ||||| ||||||||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct: 586 gccgatgtggatggtgatggacaaattaactatgaggaatttgtcaaagtaatgatggcc 645
Query: 654 aagtga 659
||||||
Sbjct: 646 aagtga 651
>gb|CF479332.1|CF479332 RTWW3_23_E02.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_23_E02_A022 5', mRNA sequence
Length = 736
Score = 194 bits (98), Expect = 5e-048
Identities = 344/426 (80%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| | |||||||||||||| |||||| | || |||||||| || || || || |||
Sbjct: 148 cagatctctgagttcaaggaggctttcagcttgtttgacaaggatggagacggatgtatc 207
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || |||||||| || || || |||||||| |||| |||||||| || || || |||
Sbjct: 208 acaacaaaggagcttgggacagtaatgcgttctttgggtcaaaacccaactgaagcagag 267
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|| || || ||||| |||||||| || || ||||| || || ||||| || ||| | |||
Sbjct: 268 ctgcaagatatgataaatgaggttgacgcagatggtaatggtaccattgactttgccgag 327
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
|| || || || ||||| || || |||||||||| || ||||| |||||||| |||||
Sbjct: 328 ttcctaaatctcatggcacggaaagtgaaggacactgattctgaagaagagctgaaggaa 387
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || || || || |||||||||||||| || ||||| || || |||||||| |||||
Sbjct: 388 gcattccgggttttcgacaaggaccagaatggtttcatatctgctgccgagctacgccac 447
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
|||||||||||| | ||||| || || ||||||||||| || || |||||||| || |||
Sbjct: 448 gtcatgacaaatttaggggaaaaactcactgatgaggaagttgatgagatgattcgggag 507
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|| ||||| ||||||||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct: 508 gccgatgtggatggtgatggacaaattaactatgaggaatttgtcaaagtaatgatggcc 567
Query: 654 aagtga 659
||||||
Sbjct: 568 aagtga 573
>gb|CO165204.1|CO165204 FLD1_53_B08.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_53_B08_A029 3', mRNA sequence
Length = 796
Score = 194 bits (98), Expect = 5e-048
Identities = 344/426 (80%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| | |||||||||||||| |||||| | || |||||||| || || || || |||
Sbjct: 51 cagatctctgagttcaaggaggctttcagcttgtttgacaaggatggagacggatgtatc 110
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || |||||||| || || || |||||||| |||| |||||||| || || || |||
Sbjct: 111 acaacaaaggagcttgggacagtaatgcgttctttgggtcaaaacccaactgaagcagag 170
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|| || || ||||| |||||||| || || ||||| || || ||||| || ||| | |||
Sbjct: 171 ctgcaagatatgataaatgaggttgacgcagatggtaatggtaccattgactttgccgag 230
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
|| || || || ||||| || || |||||||||| || ||||| |||||||| |||||
Sbjct: 231 ttcctaaatctcatggcacggaaagtgaaggacactgattctgaagaagagctgaaggaa 290
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || || || || |||||||||||||| || ||||| || || |||||||| |||||
Sbjct: 291 gcattccgggttttcgacaaggaccagaatggtttcatatctgctgccgagctacgccac 350
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
|||||||||||| | ||||| || || ||||||||||| || || |||||||| || |||
Sbjct: 351 gtcatgacaaatttaggggaaaaactcactgatgaggaagttgatgagatgattcgggag 410
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|| ||||| ||||||||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct: 411 gccgatgtggatggtgatggacaaattaactatgaggaatttgtcaaagtaatgatggcc 470
Query: 654 aagtga 659
||||||
Sbjct: 471 aagtga 476
>gb|CO165279.1|CO165279 FLD1_53_B08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_53_B08_A029 5', mRNA sequence
Length = 885
Score = 194 bits (98), Expect = 5e-048
Identities = 344/426 (80%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| | |||||||||||||| |||||| | || |||||||| || || || || |||
Sbjct: 141 cagatctctgagttcaaggaggctttcagcttgtttgacaaggatggagacggatgtatc 200
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || |||||||| || || || |||||||| |||| |||||||| || || || |||
Sbjct: 201 acaacaaaggagcttgggacagtaatgcgttctttgggtcaaaacccaactgaagcagag 260
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|| || || ||||| |||||||| || || ||||| || || ||||| || ||| | |||
Sbjct: 261 ctgcaagatatgataaatgaggttgacgcagatggtaatggtaccattgactttgccgag 320
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
|| || || || ||||| || || |||||||||| || ||||| |||||||| |||||
Sbjct: 321 ttcctaaatctcatggcacggaaagtgaaggacactgattctgaagaagagctgaaggaa 380
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || || || || |||||||||||||| || ||||| || || |||||||| |||||
Sbjct: 381 gcattccgggttttcgacaaggaccagaatggtttcatatctgctgccgagctacgccac 440
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
|||||||||||| | ||||| || || ||||||||||| || || |||||||| || |||
Sbjct: 441 gtcatgacaaatttaggggaaaaactcactgatgaggaagttgatgagatgattcgggag 500
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|| ||||| ||||||||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct: 501 gccgatgtggatggtgatggacaaattaactatgaggaatttgtcaaagtaatgatggcc 560
Query: 654 aagtga 659
||||||
Sbjct: 561 aagtga 566
>gb|CO363484.1|CO363484 RTK1_10_B03.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_10_B03_A029 3', mRNA sequence
Length = 865
Score = 194 bits (98), Expect = 5e-048
Identities = 344/426 (80%)
Strand = Plus / Minus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| | |||||||||||||| |||||| | || |||||||| || || || || |||
Sbjct: 635 cagatctctgagttcaaggaggctttcagcttgtttgacaaggatggagacggatgtatc 576
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || |||||||| || || || |||||||| |||| |||||||| || || || |||
Sbjct: 575 acaacaaaggagcttgggacagtaatgcgttctttgggtcaaaacccaactgaagcagag 516
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|| || || ||||| |||||||| || || ||||| || || ||||| || ||| | |||
Sbjct: 515 ctgcaagatatgataaatgaggttgacgcagatggtaatggtaccattgactttgccgag 456
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
|| || || || ||||| || || |||||||||| || ||||| |||||||| |||||
Sbjct: 455 ttcctaaatctcatggcacggaaagtgaaggacactgattctgaagaagagctgaaggaa 396
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || || || || |||||||||||||| || ||||| || || |||||||| |||||
Sbjct: 395 gcattccgggttttcgacaaggaccagaatggtttcatatctgctgccgagctacgccac 336
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
|||||||||||| | ||||| || || ||||||||||| || || |||||||| || |||
Sbjct: 335 gtcatgacaaatttaggggaaaaactcactgatgaggaagttgatgagatgattcgggag 276
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|| ||||| ||||||||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct: 275 gccgatgtggatggtgatggacaaattaactatgaggaatttgtcaaagtaatgatggcc 216
Query: 654 aagtga 659
||||||
Sbjct: 215 aagtga 210
>gb|CO363699.1|CO363699 RTK1_11_G04.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_11_G04_A029 3', mRNA sequence
Length = 783
Score = 194 bits (98), Expect = 5e-048
Identities = 344/426 (80%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| | |||||||||||||| |||||| | || |||||||| || || || || |||
Sbjct: 34 cagatctctgagttcaaggaggctttcagcttgtttgacaaggatggagacggatgtatc 93
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || |||||||| || || || |||||||| |||| |||||||| || || || |||
Sbjct: 94 acaacaaaggagcttgggacagtaatgcgttctttgggtcaaaacccaactgaagcagag 153
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|| || || ||||| |||||||| || || ||||| || || ||||| || ||| | |||
Sbjct: 154 ctgcaagatatgataaatgaggttgacgcagatggtaatggtaccattgactttgccgag 213
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
|| || || || ||||| || || |||||||||| || ||||| |||||||| |||||
Sbjct: 214 ttcctaaatctcatggcacggaaagtgaaggacactgattctgaagaagagctgaaggaa 273
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || || || || |||||||||||||| || ||||| || || |||||||| |||||
Sbjct: 274 gcattccgggttttcgacaaggaccagaatggtttcatatctgctgccgagctacgccac 333
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
|||||||||||| | ||||| || || ||||||||||| || || |||||||| || |||
Sbjct: 334 gtcatgacaaatttaggggaaaaactcactgatgaggaagttgatgagatgattcgggag 393
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|| ||||| ||||||||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct: 394 gccgatgtggatggtgatggacaaattaactatgaggaatttgtcaaagtaatgatggcc 453
Query: 654 aagtga 659
||||||
Sbjct: 454 aagtga 459
>gb|CO363789.1|CO363789 RTK1_11_G04.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_11_G04_A029 5', mRNA sequence
Length = 825
Score = 194 bits (98), Expect = 5e-048
Identities = 344/426 (80%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| | |||||||||||||| |||||| | || |||||||| || || || || |||
Sbjct: 154 cagatctctgagttcaaggaggctttcagcttgtttgacaaggatggagacggatgtatc 213
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || |||||||| || || || |||||||| |||| |||||||| || || || |||
Sbjct: 214 acaacaaaggagcttgggacagtaatgcgttctttgggtcaaaacccaactgaagcagag 273
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|| || || ||||| |||||||| || || ||||| || || ||||| || ||| | |||
Sbjct: 274 ctgcaagatatgataaatgaggttgacgcagatggtaatggtaccattgactttgccgag 333
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
|| || || || ||||| || || |||||||||| || ||||| |||||||| |||||
Sbjct: 334 ttcctaaatctcatggcacggaaagtgaaggacactgattctgaagaagagctgaaggaa 393
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || || || || |||||||||||||| || ||||| || || |||||||| |||||
Sbjct: 394 gcattccgggttttcgacaaggaccagaatggtttcatatctgctgccgagctacgccac 453
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
|||||||||||| | ||||| || || ||||||||||| || || |||||||| || |||
Sbjct: 454 gtcatgacaaatttaggggaaaaactcactgatgaggaagttgatgagatgattcgggag 513
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|| ||||| ||||||||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct: 514 gccgatgtggatggtgatggacaaattaactatgaggaatttgtcaaagtaatgatggcc 573
Query: 654 aagtga 659
||||||
Sbjct: 574 aagtga 579
>gb|CV033412.1|CV033412 RTNACL1_34_H07.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_34_H07_A029 3', mRNA sequence
Length = 790
Score = 194 bits (98), Expect = 5e-048
Identities = 344/426 (80%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| | |||||||||||||| |||||| | || |||||||| || || || || |||
Sbjct: 45 cagatctctgagttcaaggaggctttcagcttgtttgacaaggatggagacggatgtatc 104
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || |||||||| || || || |||||||| |||| |||||||| || || || |||
Sbjct: 105 acaacaaaggagcttgggacagtaatgcgttctttgggtcaaaacccaactgaagcagag 164
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|| || || ||||| |||||||| || || ||||| || || ||||| || ||| | |||
Sbjct: 165 ctgcaagatatgataaatgaggttgacgcagatggtaatggtaccattgactttgccgag 224
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
|| || || || ||||| || || |||||||||| || ||||| |||||||| |||||
Sbjct: 225 ttcctaaatctcatggcacggaaagtgaaggacactgattctgaagaagagctgaaggaa 284
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || || || || |||||||||||||| || ||||| || || |||||||| |||||
Sbjct: 285 gcattccgggttttcgacaaggaccagaatggtttcatatctgctgccgagctacgccac 344
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
|||||||||||| | ||||| || || ||||||||||| || || |||||||| || |||
Sbjct: 345 gtcatgacaaatttaggggaaaaactcactgatgaggaagttgatgagatgattcgggag 404
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|| ||||| ||||||||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct: 405 gccgatgtggatggtgatggacaaattaactatgaggaatttgtcaaagtaatgatggcc 464
Query: 654 aagtga 659
||||||
Sbjct: 465 aagtga 470
>gb|CV033499.1|CV033499 RTNACL1_34_H07.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_34_H07_A029 5', mRNA sequence
Length = 743
Score = 194 bits (98), Expect = 5e-048
Identities = 344/426 (80%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| | |||||||||||||| |||||| | || |||||||| || || || || |||
Sbjct: 163 cagatctctgagttcaaggaggctttcagcttgtttgacaaggatggagacggatgtatc 222
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || |||||||| || || || |||||||| |||| |||||||| || || || |||
Sbjct: 223 acaacaaaggagcttgggacagtaatgcgttctttgggtcaaaacccaactgaagcagag 282
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|| || || ||||| |||||||| || || ||||| || || ||||| || ||| | |||
Sbjct: 283 ctgcaagatatgataaatgaggttgacgcagatggtaatggtaccattgactttgccgag 342
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
|| || || || ||||| || || |||||||||| || ||||| |||||||| |||||
Sbjct: 343 ttcctaaatctcatggcacggaaagtgaaggacactgattctgaagaagagctgaaggaa 402
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || || || || |||||||||||||| || ||||| || || |||||||| |||||
Sbjct: 403 gcattccgggttttcgacaaggaccagaatggtttcatatctgctgccgagctacgccac 462
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
|||||||||||| | ||||| || || ||||||||||| || || |||||||| || |||
Sbjct: 463 gtcatgacaaatttaggggaaaaactcactgatgaggaagttgatgagatgattcgggag 522
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|| ||||| ||||||||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct: 523 gccgatgtggatggtgatggacaaattaactatgaggaatttgtcaaagtaatgatggcc 582
Query: 654 aagtga 659
||||||
Sbjct: 583 aagtga 588
>gb|CV036354.1|CV036354 RTNACL1_58_D09.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_58_D09_A029 5', mRNA sequence
Length = 798
Score = 194 bits (98), Expect = 5e-048
Identities = 344/426 (80%)
Strand = Plus / Minus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| | |||||||||||||| |||||| | || |||||||| || || || || |||
Sbjct: 747 cagatctctgagttcaaggaggctttcagcttgtttgacaaggatggagacggatgtatc 688
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || |||||||| || || || |||||||| |||| |||||||| || || || |||
Sbjct: 687 acaacaaaggagcttgggacagtaatgcgttctttgggtcaaaacccaactgaagcagag 628
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|| || || ||||| |||||||| || || ||||| || || ||||| || ||| | |||
Sbjct: 627 ctgcaagatatgataaatgaggttgacgcagatggtaatggtaccattgactttgccgag 568
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
|| || || || ||||| || || |||||||||| || ||||| |||||||| |||||
Sbjct: 567 ttcctaaatctcatggcacggaaagtgaaggacactgattctgaagaagagctgaaggaa 508
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || || || || |||||||||||||| || ||||| || || |||||||| |||||
Sbjct: 507 gcattccgggttttcgacaaggaccagaatggtttcatatctgctgccgagctacgccac 448
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
|||||||||||| | ||||| || || ||||||||||| || || |||||||| || |||
Sbjct: 447 gtcatgacaaatttaggggaaaaactcactgatgaggaagttgatgagatgattcgggag 388
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|| ||||| ||||||||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct: 387 gccgatgtggatggtgatggacaaattaactatgaggaatttgtcaaagtaatgatggcc 328
Query: 654 aagtga 659
||||||
Sbjct: 327 aagtga 322
>gb|CX645441.1|CX645441 COLD1_2_G07.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_2_G07_A029 5', mRNA sequence
Length = 712
Score = 194 bits (98), Expect = 5e-048
Identities = 344/426 (80%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| | |||||||||||||| |||||| | || |||||||| || || || || |||
Sbjct: 120 cagatctctgagttcaaggaggctttcagcttgtttgacaaggatggagacggatgtatc 179
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || |||||||| || || || |||||||| |||| |||||||| || || || |||
Sbjct: 180 acaacaaaggagcttgggacagtaatgcgttctttgggtcaaaacccaactgaagcagag 239
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|| || || ||||| |||||||| || || ||||| || || ||||| || ||| | |||
Sbjct: 240 ctgcaagatatgataaatgaggttgacgcagatggtaatggtaccattgactttgccgag 299
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
|| || || || ||||| || || |||||||||| || ||||| |||||||| |||||
Sbjct: 300 ttcctaaatctcatggcacggaaagtgaaggacactgattctgaagaagagctgaaggaa 359
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || || || || |||||||||||||| || ||||| || || |||||||| |||||
Sbjct: 360 gcattccgggttttcgacaaggaccagaatggtttcatatctgctgccgagctacgccac 419
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
|||||||||||| | ||||| || || ||||||||||| || || |||||||| || |||
Sbjct: 420 gtcatgacaaatttaggggaaaaactcactgatgaggaagttgatgagatgattcgggag 479
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|| ||||| ||||||||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct: 480 gccgatgtggatggtgatggacaaattaactatgaggaatttgtcaaagtaatgatggcc 539
Query: 654 aagtga 659
||||||
Sbjct: 540 aagtga 545
>gb|CX648246.1|CX648246 COLD1_27_A07.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_27_A07_A029 5', mRNA sequence
Length = 801
Score = 194 bits (98), Expect = 5e-048
Identities = 344/426 (80%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| | |||||||||||||| |||||| | || |||||||| || || || || |||
Sbjct: 167 cagatctctgagttcaaggaggctttcagcttgtttgacaaggatggagacggatgtatc 226
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || |||||||| || || || |||||||| |||| |||||||| || || || |||
Sbjct: 227 acaacaaaggagcttgggacagtaatgcgttctttgggtcaaaacccaactgaagcagag 286
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|| || || ||||| |||||||| || || ||||| || || ||||| || ||| | |||
Sbjct: 287 ctgcaagatatgataaatgaggttgacgcagatggtaatggtaccattgactttgccgag 346
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
|| || || || ||||| || || |||||||||| || ||||| |||||||| |||||
Sbjct: 347 ttcctaaatctcatggcacggaaagtgaaggacactgattctgaagaagagctgaaggaa 406
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || || || || |||||||||||||| || ||||| || || |||||||| |||||
Sbjct: 407 gcattccgggttttcgacaaggaccagaatggtttcatatctgctgccgagctacgccac 466
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
|||||||||||| | ||||| || || ||||||||||| || || |||||||| || |||
Sbjct: 467 gtcatgacaaatttaggggaaaaactcactgatgaggaagttgatgagatgattcgggag 526
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|| ||||| ||||||||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct: 527 gccgatgtggatggtgatggacaaattaactatgaggaatttgtcaaagtaatgatggcc 586
Query: 654 aagtga 659
||||||
Sbjct: 587 aagtga 592
>gb|CX712509.1|CX712509 RTPQ1_3_A06.b2_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_3_A06_A032 3', mRNA sequence
Length = 826
Score = 194 bits (98), Expect = 5e-048
Identities = 344/426 (80%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| | |||||||||||||| |||||| | || |||||||| || || || || |||
Sbjct: 58 cagatctctgagttcaaggaggctttcagcttgtttgacaaggatggagacggatgtatc 117
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || |||||||| || || || |||||||| |||| |||||||| || || || |||
Sbjct: 118 acaacaaaggagcttgggacagtaatgcgttctttgggtcaaaacccaactgaagcagag 177
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|| || || ||||| |||||||| || || ||||| || || ||||| || ||| | |||
Sbjct: 178 ctgcaagatatgataaatgaggttgacgcagatggtaatggtaccattgactttgccgag 237
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
|| || || || ||||| || || |||||||||| || ||||| |||||||| |||||
Sbjct: 238 ttcctaaatctcatggcacggaaagtgaaggacactgattctgaagaagagctgaaggaa 297
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || || || || |||||||||||||| || ||||| || || |||||||| |||||
Sbjct: 298 gcattccgggttttcgacaaggaccagaatggtttcatatctgctgccgagctacgccac 357
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
|||||||||||| | ||||| || || ||||||||||| || || |||||||| || |||
Sbjct: 358 gtcatgacaaatttaggggaaaaactcactgatgaggaagttgatgagatgattcgggag 417
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|| ||||| ||||||||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct: 418 gccgatgtggatggtgatggacaaattaactatgaggaatttgtcaaagtaatgatggcc 477
Query: 654 aagtga 659
||||||
Sbjct: 478 aagtga 483
>gb|CX712587.1|CX712587 RTPQ1_3_A06.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_3_A06_A032 5', mRNA sequence
Length = 864
Score = 194 bits (98), Expect = 5e-048
Identities = 344/426 (80%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| | |||||||||||||| |||||| | || |||||||| || || || || |||
Sbjct: 229 cagatctctgagttcaaggaggctttcagcttgtttgacaaggatggagacggatgtatc 288
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || |||||||| || || || |||||||| |||| |||||||| || || || |||
Sbjct: 289 acaacaaaggagcttgggacagtaatgcgttctttgggtcaaaacccaactgaagcagag 348
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|| || || ||||| |||||||| || || ||||| || || ||||| || ||| | |||
Sbjct: 349 ctgcaagatatgataaatgaggttgacgcagatggtaatggtaccattgactttgccgag 408
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
|| || || || ||||| || || |||||||||| || ||||| |||||||| |||||
Sbjct: 409 ttcctaaatctcatggcacggaaagtgaaggacactgattctgaagaagagctgaaggaa 468
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || || || || |||||||||||||| || ||||| || || |||||||| |||||
Sbjct: 469 gcattccgggttttcgacaaggaccagaatggtttcatatctgctgccgagctacgccac 528
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
|||||||||||| | ||||| || || ||||||||||| || || |||||||| || |||
Sbjct: 529 gtcatgacaaatttaggggaaaaactcactgatgaggaagttgatgagatgattcgggag 588
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|| ||||| ||||||||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct: 589 gccgatgtggatggtgatggacaaattaactatgaggaatttgtcaaagtaatgatggcc 648
Query: 654 aagtga 659
||||||
Sbjct: 649 aagtga 654
>gb|CX712846.1|CX712846 RTPQ1_5_E04.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_5_E04_A032 3', mRNA sequence
Length = 880
Score = 194 bits (98), Expect = 5e-048
Identities = 344/426 (80%)
Strand = Plus / Minus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| | |||||||||||||| |||||| | || |||||||| || || || || |||
Sbjct: 730 cagatctctgagttcaaggaggctttcagcttgtttgacaaggatggagacggatgtatc 671
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || |||||||| || || || |||||||| |||| |||||||| || || || |||
Sbjct: 670 acaacaaaggagcttgggacagtaatgcgttctttgggtcaaaacccaactgaagcagag 611
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|| || || ||||| |||||||| || || ||||| || || ||||| || ||| | |||
Sbjct: 610 ctgcaagatatgataaatgaggttgacgcagatggtaatggtaccattgactttgccgag 551
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
|| || || || ||||| || || |||||||||| || ||||| |||||||| |||||
Sbjct: 550 ttcctaaatctcatggcacggaaagtgaaggacactgattctgaagaagagctgaaggaa 491
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || || || || |||||||||||||| || ||||| || || |||||||| |||||
Sbjct: 490 gcattccgggttttcgacaaggaccagaatggtttcatatctgctgccgagctacgccac 431
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
|||||||||||| | ||||| || || ||||||||||| || || |||||||| || |||
Sbjct: 430 gtcatgacaaatttaggggaaaaactcactgatgaggaagttgatgagatgattcgggag 371
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|| ||||| ||||||||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct: 370 gccgatgtggatggtgatggacaaattaactatgaggaatttgtcaaagtaatgatggcc 311
Query: 654 aagtga 659
||||||
Sbjct: 310 aagtga 305
>gb|CX712915.1|CX712915 RTPQ1_5_E04.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_5_E04_A032 5', mRNA sequence
Length = 809
Score = 194 bits (98), Expect = 5e-048
Identities = 344/426 (80%)
Strand = Plus / Minus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| | |||||||||||||| |||||| | || |||||||| || || || || |||
Sbjct: 768 cagatctctgagttcaaggaggctttcagcttgtttgacaaggatggagacggatgtatc 709
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || |||||||| || || || |||||||| |||| |||||||| || || || |||
Sbjct: 708 acaacaaaggagcttgggacagtaatgcgttctttgggtcaaaacccaactgaagcagag 649
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|| || || ||||| |||||||| || || ||||| || || ||||| || ||| | |||
Sbjct: 648 ctgcaagatatgataaatgaggttgacgcagatggtaatggtaccattgactttgccgag 589
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
|| || || || ||||| || || |||||||||| || ||||| |||||||| |||||
Sbjct: 588 ttcctaaatctcatggcacggaaagtgaaggacactgattctgaagaagagctgaaggaa 529
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || || || || |||||||||||||| || ||||| || || |||||||| |||||
Sbjct: 528 gcattccgggttttcgacaaggaccagaatggtttcatatctgctgccgagctacgccac 469
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
|||||||||||| | ||||| || || ||||||||||| || || |||||||| || |||
Sbjct: 468 gtcatgacaaatttaggggaaaaactcactgatgaggaagttgatgagatgattcgggag 409
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|| ||||| ||||||||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct: 408 gccgatgtggatggtgatggacaaattaactatgaggaatttgtcaaagtaatgatggcc 349
Query: 654 aagtga 659
||||||
Sbjct: 348 aagtga 343
>gb|DR012949.1|DR012949 HEAT1_16_B12.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_16_B12_A029 3', mRNA sequence
Length = 889
Score = 194 bits (98), Expect = 5e-048
Identities = 344/426 (80%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| | |||||||||||||| |||||| | || |||||||| || || || || |||
Sbjct: 137 cagatctctgagttcaaggaggctttcagcttgtttgacaaggatggagacggatgtatc 196
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || |||||||| || || || |||||||| |||| |||||||| || || || |||
Sbjct: 197 acaacaaaggagcttgggacagtaatgcgttctttgggtcaaaacccaactgaagcagag 256
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|| || || ||||| |||||||| || || ||||| || || ||||| || ||| | |||
Sbjct: 257 ctgcaagatatgataaatgaggttgacgcagatggtaatggtaccattgactttgccgag 316
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
|| || || || ||||| || || |||||||||| || ||||| |||||||| |||||
Sbjct: 317 ttcctaaatctcatggcacggaaagtgaaggacactgattctgaagaagagctgaaggaa 376
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || || || || |||||||||||||| || ||||| || || |||||||| |||||
Sbjct: 377 gcattccgggttttcgacaaggaccagaatggtttcatatctgctgccgagctacgccac 436
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
|||||||||||| | ||||| || || ||||||||||| || || |||||||| || |||
Sbjct: 437 gtcatgacaaatttaggggaaaaactcactgatgaggaagttgatgagatgattcgggag 496
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|| ||||| ||||||||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct: 497 gccgatgtggatggtgatggacaaattaactatgaggaatttgtcaaagtaatgatggcc 556
Query: 654 aagtga 659
||||||
Sbjct: 557 aagtga 562
>gb|DR013028.1|DR013028 HEAT1_16_B12.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_16_B12_A029 5', mRNA sequence
Length = 812
Score = 194 bits (98), Expect = 5e-048
Identities = 344/426 (80%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| | |||||||||||||| |||||| | || |||||||| || || || || |||
Sbjct: 160 cagatctctgagttcaaggaggctttcagcttgtttgacaaggatggagacggatgtatc 219
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || |||||||| || || || |||||||| |||| |||||||| || || || |||
Sbjct: 220 acaacaaaggagcttgggacagtaatgcgttctttgggtcaaaacccaactgaagcagag 279
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|| || || ||||| |||||||| || || ||||| || || ||||| || ||| | |||
Sbjct: 280 ctgcaagatatgataaatgaggttgacgcagatggtaatggtaccattgactttgccgag 339
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
|| || || || ||||| || || |||||||||| || ||||| |||||||| |||||
Sbjct: 340 ttcctaaatctcatggcacggaaagtgaaggacactgattctgaagaagagctgaaggaa 399
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || || || || |||||||||||||| || ||||| || || |||||||| |||||
Sbjct: 400 gcattccgggttttcgacaaggaccagaatggtttcatatctgctgccgagctacgccac 459
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
|||||||||||| | ||||| || || ||||||||||| || || |||||||| || |||
Sbjct: 460 gtcatgacaaatttaggggaaaaactcactgatgaggaagttgatgagatgattcgggag 519
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|| ||||| ||||||||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct: 520 gccgatgtggatggtgatggacaaattaactatgaggaatttgtcaaagtaatgatggcc 579
Query: 654 aagtga 659
||||||
Sbjct: 580 aagtga 585
>gb|DR013246.1|DR013246 HEAT1_18_D03.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_18_D03_A029 3', mRNA sequence
Length = 852
Score = 194 bits (98), Expect = 5e-048
Identities = 344/426 (80%)
Strand = Plus / Plus
Query: 234 cagatcgccgagttcaaggaggccttcagcctcttcgacaaggacggggatggttgcatc 293
|||||| | |||||||||||||| |||||| | || |||||||| || || || || |||
Sbjct: 166 cagatctctgagttcaaggaggctttcagcttgtttgacaaggatggagacggatgtatc 225
Query: 294 acgaccaaggagctgggaactgtcatgcgttcactggggcaaaaccctacagaggctgag 353
|| || |||||||| || || || |||||||| |||| |||||||| || || || |||
Sbjct: 226 acaacaaaggagcttgggacagtaatgcgttctttgggtcaaaacccaactgaagcagag 285
Query: 354 ctccaggacatgatcaatgaggtcgatgccgatggcaacggcaccatcgattttccagag 413
|| || || ||||| |||||||| || || ||||| || || ||||| || ||| | |||
Sbjct: 286 ctgcaagatatgataaatgaggttgacgcagatggtaatggtaccattgactttgccgag 345
Query: 414 tttctgaaccttatggctcgcaagatgaaggacaccgactctgaggaagagctcaaggag 473
|| || || || ||||| || || |||||||||| || ||||| |||||||| |||||
Sbjct: 346 ttcctaaatctcatggcacggaaagtgaaggacactgattctgaagaagagctgaaggaa 405
Query: 474 gcctttcgtgtgtttgacaaggaccagaacggcttcatctccgccgccgagctccgccat 533
|| || || || || |||||||||||||| || ||||| || || |||||||| |||||
Sbjct: 406 gcattccgggttttcgacaaggaccagaatggtttcatatctgctgccgagctacgccac 465
Query: 534 gtcatgacaaatcttggggagaagctaactgatgaggaggtagacgagatgatccgtgag 593
|||||||||||| | ||||| || || ||||||||||| || || |||||||| || |||
Sbjct: 466 gtcatgacaaatttaggggaaaaactcactgatgaggaagttgatgagatgattcgggag 525
Query: 594 gctgatgtcgatggtgatggccagattaactacgaggagtttgttaaggtcatgatggcc 653
|| ||||| ||||||||||| || |||||||| ||||| ||||| || || |||||||||
Sbjct: 526 gccgatgtggatggtgatggacaaattaactatgaggaatttgtcaaagtaatgatggcc 585
Query: 654 aagtga 659
||||||
Sbjct: 586 aagtga 591
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 116,999
Number of Sequences: 355925
Number of extensions: 116999
Number of successful extensions: 32498
Number of sequences better than 0.5: 317
Number of HSP's better than 0.5 without gapping: 316
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 31835
Number of HSP's gapped (non-prelim): 433
length of query: 986
length of database: 217,277,237
effective HSP length: 19
effective length of query: 967
effective length of database: 210,514,662
effective search space: 203567678154
effective search space used: 203567678154
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)