BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440570.2.2
(905 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL750084.1|AL750084 AL750084 AS Pinus pinaster cDNA clon... 88 7e-016
gb|AL750085.1|AL750085 AL750085 AS Pinus pinaster cDNA clon... 88 7e-016
gb|BX249215.1|BX249215 BX249215 Pinus pinaster differenciat... 88 7e-016
gb|BX250831.1|BX250831 BX250831 Pinus pinaster differenciat... 88 7e-016
gb|BX252084.1|BX252084 BX252084 Pinus pinaster differenciat... 88 7e-016
gb|CF388419.1|CF388419 RTDR2_3_D12.b1_A021 Loblolly pine ro... 88 7e-016
gb|CF388513.1|CF388513 RTDR2_3_D12.g1_A021 Loblolly pine ro... 88 7e-016
gb|CF393767.1|CF393767 RTDS2_1_E10.b1_A021 Drought-stressed... 88 7e-016
gb|CF393809.1|CF393809 RTDS2_1_E10.g1_A021 Drought-stressed... 88 7e-016
gb|CF394007.1|CF394007 RTDS2_2_A02.g1_A021 Drought-stressed... 88 7e-016
gb|CF395802.1|CF395802 RTDS2_17_E07.g1_A021 Drought-stresse... 88 7e-016
gb|CF472571.1|CF472571 RTDS1_10_D04.g1_A015 Drought-stresse... 88 7e-016
gb|CF475880.1|CF475880 RTWW2_15_G08.g1_A021 Well-watered lo... 88 7e-016
gb|CF478632.1|CF478632 RTWW3_16_C09.b1_A022 Well-watered lo... 88 7e-016
gb|CF478720.1|CF478720 RTWW3_16_C09.g1_A022 Well-watered lo... 88 7e-016
gb|CO160859.1|CO160859 FLD1_25_C10.b1_A029 Root flooded Pin... 88 7e-016
gb|CO160940.1|CO160940 FLD1_25_C10.g1_A029 Root flooded Pin... 88 7e-016
gb|CO165196.1|CO165196 FLD1_53_A12.b1_A029 Root flooded Pin... 88 7e-016
gb|CO361121.1|CO361121 NDL2_2_H05.g1_A029 Needles control 2... 88 7e-016
gb|CO363208.1|CO363208 RTK1_8_G02.b1_A029 Roots minus potas... 88 7e-016
gb|CO363290.1|CO363290 RTK1_8_G02.g1_A029 Roots minus potas... 88 7e-016
gb|DR013447.1|DR013447 HEAT1_19_H07.b1_A029 Root at 37 C fo... 88 7e-016
gb|DR013532.1|DR013532 HEAT1_19_H07.g1_A029 Root at 37 C fo... 88 7e-016
gb|DR016444.1|DR016444 STRS1_10_D12.b1_A034 Shoot tip pitch... 88 7e-016
gb|DR022333.1|DR022333 STRS1_50_H06.b1_A034 Shoot tip pitch... 88 7e-016
gb|DR022411.1|DR022411 STRS1_50_H06.g1_A034 Shoot tip pitch... 88 7e-016
gb|DR058333.1|DR058333 RTNIT1_11_E05.b1_A029 Roots minus ni... 88 7e-016
gb|DR079965.1|DR079965 RTFEPL1_19_C10.b1_A029 Roots plus ad... 88 7e-016
gb|DR079988.1|DR079988 RTFEPL1_19_F12.b1_A029 Roots plus ad... 88 7e-016
gb|DR080021.1|DR080021 RTFEPL1_19_C10.g1_A029 Roots plus ad... 88 7e-016
gb|DR080048.1|DR080048 RTFEPL1_19_F12.g1_A029 Roots plus ad... 88 7e-016
gb|DR110601.1|DR110601 RTS1_11_G05.g1_A029 Roots minus sulf... 88 7e-016
gb|DR163171.1|DR163171 RTFE1_41_H01.b1_A029 Roots minus iro... 88 7e-016
gb|DR163259.1|DR163259 RTFE1_41_H01.g1_A029 Roots minus iro... 88 7e-016
gb|DR165796.1|DR165796 RTPHOS1_7_H07.b1_A029 Roots minus ph... 88 7e-016
gb|DR165877.1|DR165877 RTPHOS1_7_H07.g1_A029 Roots minus ph... 88 7e-016
gb|DR386266.1|DR386266 RTHG1_14_A12.b1_A029 Roots plus adde... 88 7e-016
gb|DR386939.1|DR386939 RTHG1_18_H01.b1_A029 Roots plus adde... 88 7e-016
gb|BE582355.1|BE582355 NXCI_032_D07_F NXCI (Nsf Xylem Compr... 86 3e-015
gb|CF472502.1|CF472502 RTDS1_10_D04.b1_A015 Drought-stresse... 86 3e-015
gb|CF664209.1|CF664209 RTCNT1_8_D12.b1_A029 Root control Pi... 86 3e-015
gb|BE123552.1|BE123552 NXNV_149_F03_F Nsf Xylem Normal wood... 84 1e-014
gb|BF169553.1|BF169553 NXCI_124_B02_F NXCI (Nsf Xylem Compr... 84 1e-014
gb|BF778329.1|BF778329 NXSI_083_A09_F NXSI (Nsf Xylem Side ... 84 1e-014
gb|BQ654765.1|BQ654765 NXRV085_D02_F NXRV (Nsf Xylem Root w... 84 1e-014
gb|BQ699933.1|BQ699933 NXRV131_F04_F NXRV (Nsf Xylem Root w... 84 1e-014
gb|BQ700700.1|BQ700700 NXRV110_B10_F NXRV (Nsf Xylem Root w... 84 1e-014
gb|CF664271.1|CF664271 RTCNT1_8_D12.g1_A029 Root control Pi... 84 1e-014
gb|CX647260.1|CX647260 COLD1_14_F06.g1_A029 Root cold Pinus... 84 1e-014
gb|DR112027.1|DR112027 RTS1_25_G12.b1_A029 Roots minus sulf... 82 5e-014
gb|DR112096.1|DR112096 RTS1_25_G12.g1_A029 Roots minus sulf... 82 5e-014
gb|CF394401.1|CF394401 RTDS2_5_B07.b1_A021 Drought-stressed... 80 2e-013
gb|CF394436.1|CF394436 RTDS2_5_B07.g1_A021 Drought-stressed... 80 2e-013
gb|CF478263.1|CF478263 RTWW3_18_D02.b1_A022 Well-watered lo... 80 2e-013
gb|CF478405.1|CF478405 RTWW3_18_D02.g1_A022 Well-watered lo... 80 2e-013
gb|CF664628.1|CF664628 RTCNT1_11_B08.b1_A029 Root control P... 80 2e-013
gb|CF664711.1|CF664711 RTCNT1_11_B08.g1_A029 Root control P... 80 2e-013
gb|CF666428.1|CF666428 RTCNT1_23_E09.b1_A029 Root control P... 80 2e-013
gb|CF666495.1|CF666495 RTCNT1_23_E09.g1_A029 Root control P... 80 2e-013
gb|CF669691.1|CF669691 RTCNT1_45_B02.g1_A029 Root control P... 80 2e-013
gb|CO162376.1|CO162376 FLD1_34_H10.g1_A029 Root flooded Pin... 80 2e-013
gb|CO162858.1|CO162858 FLD1_38_A04.b1_A029 Root flooded Pin... 80 2e-013
gb|CO165271.1|CO165271 FLD1_53_A12.g1_A029 Root flooded Pin... 80 2e-013
gb|CO166493.1|CO166493 FLD1_62_H08.b1_A029 Root flooded Pin... 80 2e-013
gb|CO166559.1|CO166559 FLD1_62_H08.g1_A029 Root flooded Pin... 80 2e-013
gb|CO170709.1|CO170709 NDL1_16_G09.b1_A029 Needles control ... 80 2e-013
gb|CO170779.1|CO170779 NDL1_16_G09.g1_A029 Needles control ... 80 2e-013
gb|CO172081.1|CO172081 NDL1_27_B07.b1_A029 Needles control ... 80 2e-013
gb|CO173560.1|CO173560 NDL1_37_D04.b1_A029 Needles control ... 80 2e-013
gb|CO175172.1|CO175172 NDL1_53_B03.b1_A029 Needles control ... 80 2e-013
gb|CO175248.1|CO175248 NDL1_53_B03.g1_A029 Needles control ... 80 2e-013
gb|CO176685.1|CO176685 NDL1_63_C05.g1_A029 Needles control ... 80 2e-013
gb|CO199598.1|CO199598 GEO2_2_G02.b1_A032 Root gravitropism... 80 2e-013
gb|CO199677.1|CO199677 GEO2_2_G02.g1_A032 Root gravitropism... 80 2e-013
gb|CO361021.1|CO361021 NDL2_2_D04.b1_A029 Needles control 2... 80 2e-013
gb|CO361031.1|CO361031 NDL2_2_E04.b1_A029 Needles control 2... 80 2e-013
gb|CO361092.1|CO361092 NDL2_2_E04.g1_A029 Needles control 2... 80 2e-013
gb|CO361376.1|CO361376 NDL2_4_B03.g1_A029 Needles control 2... 80 2e-013
gb|CO365003.1|CO365003 RTK1_23_C04.b1_A029 Roots minus pota... 80 2e-013
gb|CO365083.1|CO365083 RTK1_23_C04.g1_A029 Roots minus pota... 80 2e-013
gb|CV031901.1|CV031901 RTNACL1_4_B01.g1_A029 Roots plus add... 80 2e-013
gb|CV033739.1|CV033739 RTNACL1_36_G12.b1_A029 Roots plus ad... 80 2e-013
gb|CV033827.1|CV033827 RTNACL1_36_G12.g1_A029 Roots plus ad... 80 2e-013
gb|CX650012.1|CX650012 COLD1_43_A05.b1_A029 Root cold Pinus... 80 2e-013
gb|CX650063.1|CX650063 COLD1_43_G01.b1_A029 Root cold Pinus... 80 2e-013
gb|CX650148.1|CX650148 COLD1_43_G01.g1_A029 Root cold Pinus... 80 2e-013
gb|CX653206.1|CX653206 COLD1_64_C05.b1_A029 Root cold Pinus... 80 2e-013
gb|DN628839.1|DN628839 EST979655 Subtracted pine embryo lib... 80 2e-013
gb|DN634492.1|DN634492 EST985308 Subtracted pine embryo lib... 80 2e-013
gb|DR012263.1|DR012263 HEAT1_11_B02.g1_A029 Root at 37 C fo... 80 2e-013
gb|DR023648.1|DR023648 STRS1_59_D01.b1_A034 Shoot tip pitch... 80 2e-013
gb|DR049287.1|DR049287 RTBOR1_15_C06.b1_A029 Roots plus add... 80 2e-013
gb|DR059991.1|DR059991 RTNIT1_25_B06.b1_A029 Roots minus ni... 80 2e-013
gb|DR060070.1|DR060070 RTNIT1_25_B06.g1_A029 Roots minus ni... 80 2e-013
gb|DR072600.1|DR072600 RTDK1_27_H08.b1_A029 Roots, dark Pin... 80 2e-013
gb|DR072749.1|DR072749 RTDK1_28_G10.b1_A029 Roots, dark Pin... 80 2e-013
gb|DR072829.1|DR072829 RTDK1_28_G10.g1_A029 Roots, dark Pin... 80 2e-013
gb|DR100886.1|DR100886 STRR1_69_B12.b1_A033 Stem Response R... 80 2e-013
gb|DR100956.1|DR100956 STRR1_69_B12.g1_A033 Stem Response R... 80 2e-013
gb|DR101989.1|DR101989 STRR1_77_F09.b1_A033 Stem Response R... 80 2e-013
gb|DR102569.1|DR102569 STRR1_82_D04.b1_A033 Stem Response R... 80 2e-013
gb|DR102632.1|DR102632 STRR1_82_D04.g1_A033 Stem Response R... 80 2e-013
gb|DR112465.1|DR112465 RTS1_28_H07.b1_A029 Roots minus sulf... 80 2e-013
gb|DR117025.1|DR117025 RTMG1_4_F07.b1_A029 Roots minus magn... 80 2e-013
gb|DR117102.1|DR117102 RTMG1_4_F07.g1_A029 Roots minus magn... 80 2e-013
gb|DR118920.1|DR118920 RTMG1_20_B07.b1_A029 Roots minus mag... 80 2e-013
gb|DR160843.1|DR160843 RTFE1_8_H05.b1_A029 Roots minus iron... 80 2e-013
gb|DR160938.1|DR160938 RTFE1_8_H05.g1_A029 Roots minus iron... 80 2e-013
gb|DR163177.1|DR163177 RTFE1_41_H09.b1_A029 Roots minus iro... 80 2e-013
gb|DR163267.1|DR163267 RTFE1_41_H09.g1_A029 Roots minus iro... 80 2e-013
gb|DR179529.1|DR179529 RTMNUT1_22_E08.g2_A029 Roots minus m... 80 2e-013
gb|DR180569.1|DR180569 RTMNUT1_33_B02.g1_A029 Roots minus m... 80 2e-013
gb|DR384793.1|DR384793 RTHG1_4_D04.g1_A029 Roots plus added... 80 2e-013
gb|DR387653.1|DR387653 RTHG1_23_F09.b1_A029 Roots plus adde... 80 2e-013
gb|DR387733.1|DR387733 RTHG1_23_F09.g2_A029 Roots plus adde... 80 2e-013
gb|DT629977.1|DT629977 EST1154389 Subtracted pine embryo li... 80 2e-013
gb|BM902829.1|BM902829 NXLV_074_A02_F NXLV (Nsf Xylem Late ... 78 7e-013
gb|DR049334.1|DR049334 RTBOR1_15_C06.g1_A029 Roots plus add... 78 7e-013
gb|DR071949.1|DR071949 RTDK1_23_C09.b1_A029 Roots, dark Pin... 78 7e-013
gb|BF517876.1|BF517876 NXSI_029_B12_F NXSI (Nsf Xylem Side ... 76 3e-012
gb|BF517946.1|BF517946 NXSI_031_H10_F NXSI (Nsf Xylem Side ... 76 3e-012
gb|BG039777.1|BG039777 NXSI_103_G11_F NXSI (Nsf Xylem Side ... 76 3e-012
gb|BG040507.1|BG040507 NXSI_112_A02_F NXSI (Nsf Xylem Side ... 76 3e-012
gb|BQ697742.1|BQ697742 NXPV_052_C11_F NXPV (Nsf Xylem Plani... 76 3e-012
gb|BX677124.1|BX677124 BX677124 RN Pinus pinaster cDNA clon... 76 3e-012
gb|CO361298.1|CO361298 NDL2_4_B03.b1_A029 Needles control 2... 76 3e-012
gb|CX647195.1|CX647195 COLD1_14_F06.b1_A029 Root cold Pinus... 76 3e-012
gb|DR165348.1|DR165348 RTPHOS1_4_A03.g1_A029 Roots minus ph... 76 3e-012
gb|CD020287.1|CD020287 NXNV056D10 Nsf Xylem Normal wood Ver... 74 1e-011
gb|AW010654.1|AW010654 ST09E04 Pine TriplEx shoot tip libra... 72 4e-011
gb|DR100323.1|DR100323 STRR1_63_F10.b1_A033 Stem Response R... 72 4e-011
gb|CF393910.1|CF393910 RTDS2_2_C02.b1_A021 Drought-stressed... 70 2e-010
gb|BX677138.1|BX677138 BX677138 RN Pinus pinaster cDNA clon... 68 7e-010
gb|BX680410.1|BX680410 BX680410 RS Pinus pinaster cDNA clon... 68 7e-010
gb|AW290194.1|AW290194 NXNV015H04F Nsf Xylem Normal wood Ve... 64 1e-008
gb|BG275347.1|BG275347 NXSI_142_F11_F NXSI (Nsf Xylem Side ... 64 1e-008
gb|CD026885.1|CD026885 NXNV015H04 Nsf Xylem Normal wood Ver... 64 1e-008
gb|CO176608.1|CO176608 NDL1_63_C05.b1_A029 Needles control ... 64 1e-008
gb|CX652431.1|CX652431 COLD1_59_B09.b1_A029 Root cold Pinus... 64 1e-008
gb|DR102049.1|DR102049 STRR1_77_F09.g1_A033 Stem Response R... 64 1e-008
gb|CD017570.1|CD017570 NXCI_128_B11_F NXCI (Nsf Xylem Compr... 62 4e-008
gb|CF470845.1|CF470845 RTDS1_15_E06.b1_A015 Drought-stresse... 60 2e-007
gb|DN631836.1|DN631836 EST982652 Subtracted pine embryo lib... 60 2e-007
gb|DR100385.1|DR100385 STRR1_63_F10.g1_A033 Stem Response R... 60 2e-007
gb|CD023427.1|CD023427 NXPV_126_B07_F NXPV (Nsf Xylem Plani... 52 4e-005
gb|BQ696743.1|BQ696743 NXPV_044_G08_F NXPV (Nsf Xylem Plani... 50 2e-004
gb|DN629274.1|DN629274 EST980090 Subtracted pine embryo lib... 42 0.039
>gb|AL750084.1|AL750084 AL750084 AS Pinus pinaster cDNA clone AS05F01 similar to RP L18,
mRNA sequence
Length = 677
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 361 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 420
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 421 ttgttgcgtggccccaagagccatcgtgaggcggtcaagcactttggaagggcaccaggt 480
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || |||||||| ||||| || |||| ||||
Sbjct: 481 gttccacacagccacactaaaccatatgttcgatccaagggtaggaaatttgagatggct 540
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 541 cgtggtaggagaaacagtcgtggcttcaaggt 572
Score = 75.8 bits (38), Expect = 3e-012
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
|||||||||||||| |||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 85 tacctcaagctccttgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 144
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 145 aatgcagtgattttaaagaggctgttcatgagcaaaac 182
>gb|AL750085.1|AL750085 AL750085 AS Pinus pinaster cDNA clone AS05F02 similar to RP L18,
mRNA sequence
Length = 680
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 361 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 420
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 421 ttgttgcgtggccccaagagccatcgtgaggcggtcaagcactttggaagggcaccaggt 480
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || |||||||| ||||| || |||| ||||
Sbjct: 481 gttccacacagccacactaaaccatatgttcgatccaagggtaggaaatttgagatggct 540
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 541 cgtggtaggagaaacagtcgtggcttcaaggt 572
Score = 75.8 bits (38), Expect = 3e-012
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
|||||||||||||| |||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 85 tacctcaagctccttgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 144
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 145 aatgcagtgattttaaagaggctgttcatgagcaaaac 182
>gb|BX249215.1|BX249215 BX249215 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP021D02 similar to 60S RIBOSOMAL PROTEIN
L18, mRNA sequence
Length = 697
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 312 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 371
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 372 ttgttgcgtggccccaagagccatcgtgaggcggtcaagcactttggaagggcaccaggt 431
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || |||||||| ||||| || |||| ||||
Sbjct: 432 gttccacacagccacactaaaccatatgttcgatccaagggtaggaaatttgagatggct 491
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 492 cgtggtaggagaaacagtcgtggcttcaaggt 523
Score = 75.8 bits (38), Expect = 3e-012
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
|||||||||||||| |||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 36 tacctcaagctccttgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 95
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 96 aatgcagtgattttaaagaggctgttcatgagcaaaac 133
>gb|BX250831.1|BX250831 BX250831 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP041H07 similar to 60S RIBOSOMAL PROTEIN
L18, mRNA sequence
Length = 664
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 403 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 462
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 463 ttgttgcgtggccccaagagccatcgtgaggcggtcaagcactttggaagggcaccaggt 522
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || |||||||| ||||| || |||| ||||
Sbjct: 523 gttccacacagccacactaaaccatatgttcgatccaagggtaggaaatttgagatggct 582
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 583 cgtggtaggagaaacagtcgtggcttcaaggt 614
Score = 75.8 bits (38), Expect = 3e-012
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
|||||||||||||| |||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 127 tacctcaagctccttgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 186
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 187 aatgcagtgattttaaagaggctgttcatgagcaaaac 224
>gb|BX252084.1|BX252084 BX252084 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP059E04 similar to 60S RIBOSOMAL PROTEIN
L18, mRNA sequence
Length = 671
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 383 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 442
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 443 ttgttgcgtggccccaagagccatcgtgaggcggtcaagcactttggaagggcaccaggt 502
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || |||||||| ||||| || |||| ||||
Sbjct: 503 gttccacacagccacactaaaccatatgttcgatccaagggtaggaaatttgagatggct 562
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 563 cgtggtaggagaaacagtcgtggcttcaaggt 594
Score = 75.8 bits (38), Expect = 3e-012
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
|||||||||||||| |||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 107 tacctcaagctccttgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 166
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 167 aatgcagtgattttaaagaggctgttcatgagcaaaac 204
>gb|CF388419.1|CF388419 RTDR2_3_D12.b1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_3_D12_A021 3', mRNA
sequence
Length = 732
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 143 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 202
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 203 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 262
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 263 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 322
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 323 cgtggtaggagaaacagtcgtggcttcaaggt 354
>gb|CF388513.1|CF388513 RTDR2_3_D12.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_3_D12_A021 5', mRNA
sequence
Length = 740
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 384 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 443
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 444 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 503
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 504 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 563
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 564 cgtggtaggagaaacagtcgtggcttcaaggt 595
Score = 83.8 bits (42), Expect = 1e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 108 tacctcaagctcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 167
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 168 aatgcagtgattttaaagaggctgttcatgagcaaaac 205
>gb|CF393767.1|CF393767 RTDS2_1_E10.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_1_E10_A021 3', mRNA sequence
Length = 631
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 42 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 101
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 102 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 161
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 162 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 221
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 222 cgtggtaggagaaacagtcgtggcttcaaggt 253
>gb|CF393809.1|CF393809 RTDS2_1_E10.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_1_E10_A021 5', mRNA sequence
Length = 738
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 423 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 482
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 483 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 542
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 543 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 602
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 603 cgtggtaggagaaacagtcgtggcttcaaggt 634
Score = 83.8 bits (42), Expect = 1e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 147 tacctcaagctcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 206
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 207 aatgcagtgattttaaagaggctgttcatgagcaaaac 244
>gb|CF394007.1|CF394007 RTDS2_2_A02.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_2_A02_A021 5', mRNA sequence
Length = 642
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 267 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 326
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 327 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 386
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 387 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 446
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 447 cgtggtaggagaaacagtcgtggcttcaaggt 478
>gb|CF395802.1|CF395802 RTDS2_17_E07.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_17_E07_A021 5', mRNA sequence
Length = 746
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 369 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 428
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 429 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 488
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 489 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 548
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 549 cgtggtaggagaaacagtcgtggcttcaaggt 580
Score = 83.8 bits (42), Expect = 1e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 93 tacctcaagctcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 152
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 153 aatgcagtgattttaaagaggctgttcatgagcaaaac 190
>gb|CF472571.1|CF472571 RTDS1_10_D04.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_10_D04_A015 5', mRNA sequence
Length = 680
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 62 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 121
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 122 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 181
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 182 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 241
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 242 cgtggtaggagaaacagtcgtggcttcaaggt 273
>gb|CF475880.1|CF475880 RTWW2_15_G08.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_15_G08_A021 5', mRNA sequence
Length = 686
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 367 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 426
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 427 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 486
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 487 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 546
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 547 cgtggtaggagaaacagtcgtggcttcaaggt 578
Score = 83.8 bits (42), Expect = 1e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 91 tacctcaagctcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 150
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 151 aatgcagtgattttaaagaggctgttcatgagcaaaac 188
>gb|CF478632.1|CF478632 RTWW3_16_C09.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_16_C09_A022 3', mRNA sequence
Length = 631
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 42 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 101
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 102 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 161
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 162 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 221
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 222 cgtggtaggagaaacagtcgtggcttcaaggt 253
>gb|CF478720.1|CF478720 RTWW3_16_C09.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_16_C09_A022 5', mRNA sequence
Length = 724
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 346 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 405
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 406 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 465
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 466 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 525
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 526 cgtggtaggagaaacagtcgtggcttcaaggt 557
Score = 83.8 bits (42), Expect = 1e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 70 tacctcaagctcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 129
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 130 aatgcagtgattttaaagaggctgttcatgagcaaaac 167
>gb|CO160859.1|CO160859 FLD1_25_C10.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_25_C10_A029 3', mRNA sequence
Length = 842
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 254 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 313
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 314 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 373
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 374 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 433
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 434 cgtggtaggagaaacagtcgtggcttcaaggt 465
>gb|CO160940.1|CO160940 FLD1_25_C10.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_25_C10_A029 5', mRNA sequence
Length = 887
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 378 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 437
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 438 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 497
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 498 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 557
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 558 cgtggtaggagaaacagtcgtggcttcaaggt 589
Score = 83.8 bits (42), Expect = 1e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 102 tacctcaagctcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 161
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 162 aatgcagtgattttaaagaggctgttcatgagcaaaac 199
>gb|CO165196.1|CO165196 FLD1_53_A12.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_53_A12_A029 3', mRNA sequence
Length = 710
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 126 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 185
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 186 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 245
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 246 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 305
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 306 cgtggtaggagaaacagtcgtggcttcaaggt 337
>gb|CO361121.1|CO361121 NDL2_2_H05.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_2_H05_A029 5', mRNA sequence
Length = 831
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 425 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 484
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 485 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 544
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 545 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 604
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 605 cgtggtaggagaaacagtcgtggcttcaaggt 636
Score = 83.8 bits (42), Expect = 1e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 149 tacctcaagctcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 208
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 209 aatgcagtgattttaaagaggctgttcatgagcaaaac 246
>gb|CO363208.1|CO363208 RTK1_8_G02.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_8_G02_A029 3', mRNA sequence
Length = 736
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 148 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 207
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 208 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 267
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 268 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 327
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 328 cgtggtaggagaaacagtcgtggcttcaaggt 359
>gb|CO363290.1|CO363290 RTK1_8_G02.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_8_G02_A029 5', mRNA sequence
Length = 705
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 379 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 438
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 439 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 498
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 499 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 558
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 559 cgtggtaggagaaacagtcgtggcttcaaggt 590
Score = 83.8 bits (42), Expect = 1e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 103 tacctcaagctcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 162
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 163 aatgcagtgattttaaagaggctgttcatgagcaaaac 200
>gb|DR013447.1|DR013447 HEAT1_19_H07.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_19_H07_A029 3', mRNA sequence
Length = 740
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 148 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 207
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 208 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 267
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 268 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 327
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 328 cgtggtaggagaaacagtcgtggcttcaaggt 359
>gb|DR013532.1|DR013532 HEAT1_19_H07.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_19_H07_A029 5', mRNA sequence
Length = 677
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 360 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 419
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 420 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 479
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 480 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 539
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 540 cgtggtaggagaaacagtcgtggcttcaaggt 571
Score = 83.8 bits (42), Expect = 1e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 84 tacctcaagctcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 143
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 144 aatgcagtgattttaaagaggctgttcatgagcaaaac 181
>gb|DR016444.1|DR016444 STRS1_10_D12.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_10_D12_A034 3', mRNA sequence
Length = 798
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Minus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 418 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 359
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 358 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 299
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 298 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 239
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 238 cgtggtaggagaaacagtcgtggcttcaaggt 207
Score = 83.8 bits (42), Expect = 1e-014
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 694 tacctcaagctcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 635
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 634 aatgcagtgattttaaagaggctgttcatgagcaaaac 597
>gb|DR022333.1|DR022333 STRS1_50_H06.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_50_H06_A034 3', mRNA sequence
Length = 821
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 233 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 292
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 293 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 352
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 353 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 412
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 413 cgtggtaggagaaacagtcgtggcttcaaggt 444
>gb|DR022411.1|DR022411 STRS1_50_H06.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_50_H06_A034 5', mRNA sequence
Length = 744
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 373 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 432
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 433 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 492
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 493 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 552
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 553 cgtggtaggagaaacagtcgtggcttcaaggt 584
Score = 83.8 bits (42), Expect = 1e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 97 tacctcaagctcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 156
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 157 aatgcagtgattttaaagaggctgttcatgagcaaaac 194
>gb|DR058333.1|DR058333 RTNIT1_11_E05.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_11_E05_A029 3', mRNA sequence
Length = 655
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 70 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 129
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 130 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 189
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 190 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 249
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 250 cgtggtaggagaaacagtcgtggcttcaaggt 281
>gb|DR079965.1|DR079965 RTFEPL1_19_C10.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_19_C10_A029 3', mRNA sequence
Length = 799
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 240 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 299
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 300 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 359
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 360 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 419
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 420 cgtggtaggagaaacagtcgtggcttcaaggt 451
>gb|DR079988.1|DR079988 RTFEPL1_19_F12.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_19_F12_A029 3', mRNA sequence
Length = 855
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 267 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 326
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 327 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 386
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 387 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 446
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 447 cgtggtaggagaaacagtcgtggcttcaaggt 478
Score = 63.9 bits (32), Expect = 1e-008
Identities = 74/88 (84%)
Strand = Plus / Plus
Query: 168 tcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtca 227
||||||||||||| |||||||| ||||| ||||| ||||| |||| ||||| || || |
Sbjct: 1 tcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttcaatgcagtga 60
Query: 228 ttctcaagaggcttttcatgagtaaaac 255
|| | |||||||| |||||||| |||||
Sbjct: 61 ttttaaagaggctgttcatgagcaaaac 88
>gb|DR080021.1|DR080021 RTFEPL1_19_C10.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_19_C10_A029 5', mRNA sequence
Length = 671
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 360 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 419
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 420 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 479
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 480 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 539
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 540 cgtggtaggagaaacagtcgtggcttcaaggt 571
Score = 83.8 bits (42), Expect = 1e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 84 tacctcaagctcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 143
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 144 aatgcagtgattttaaagaggctgttcatgagcaaaac 181
>gb|DR080048.1|DR080048 RTFEPL1_19_F12.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_19_F12_A029 5', mRNA sequence
Length = 763
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 361 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 420
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 421 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 480
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 481 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 540
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 541 cgtggtaggagaaacagtcgtggcttcaaggt 572
Score = 83.8 bits (42), Expect = 1e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 85 tacctcaagctcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 144
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 145 aatgcagtgattttaaagaggctgttcatgagcaaaac 182
>gb|DR110601.1|DR110601 RTS1_11_G05.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_11_G05_A029 5', mRNA sequence
Length = 847
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 372 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 431
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 432 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 491
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 492 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 551
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 552 cgtggtaggagaaacagtcgtggcttcaaggt 583
Score = 83.8 bits (42), Expect = 1e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 96 tacctcaagctcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 155
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 156 aatgcagtgattttaaagaggctgttcatgagcaaaac 193
>gb|DR163171.1|DR163171 RTFE1_41_H01.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_41_H01_A029 3', mRNA sequence
Length = 824
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 236 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 295
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 296 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 355
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 356 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 415
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 416 cgtggtaggagaaacagtcgtggcttcaaggt 447
>gb|DR163259.1|DR163259 RTFE1_41_H01.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_41_H01_A029 5', mRNA sequence
Length = 888
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 378 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 437
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 438 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 497
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 498 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 557
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 558 cgtggtaggagaaacagtcgtggcttcaaggt 589
Score = 83.8 bits (42), Expect = 1e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 102 tacctcaagctcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 161
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 162 aatgcagtgattttaaagaggctgttcatgagcaaaac 199
>gb|DR165796.1|DR165796 RTPHOS1_7_H07.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_7_H07_A029 3', mRNA sequence
Length = 846
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 261 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 320
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 321 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 380
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 381 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 440
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 441 cgtggtaggagaaacagtcgtggcttcaaggt 472
>gb|DR165877.1|DR165877 RTPHOS1_7_H07.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_7_H07_A029 5', mRNA sequence
Length = 894
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 419 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 478
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 479 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 538
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 539 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 598
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 599 cgtggtaggagaaacagtcgtggcttcaaggt 630
Score = 83.8 bits (42), Expect = 1e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 143 tacctcaagctcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 202
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 203 aatgcagtgattttaaagaggctgttcatgagcaaaac 240
>gb|DR386266.1|DR386266 RTHG1_14_A12.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_14_A12_A029 3', mRNA sequence
Length = 815
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 226 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 285
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 286 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 345
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 346 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 405
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 406 cgtggtaggagaaacagtcgtggcttcaaggt 437
>gb|DR386939.1|DR386939 RTHG1_18_H01.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_18_H01_A029 3', mRNA sequence
Length = 782
Score = 87.7 bits (44), Expect = 7e-016
Identities = 170/212 (80%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 40 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 99
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| |||||||| || | ||||||||| | ||| || ||
Sbjct: 100 ctgttgcgtggccccaagagccatcgtgaggctgtcaagcactttggaagggcaccaggt 159
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
|| || ||||||||||| || || ||||| || || ||||| ||||| || |||| ||||
Sbjct: 160 gttccccacagccacactaaaccatatgttcgatctaagggtaggaaatttgagatggct 219
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||| ||||| ||||| ||||| ||||||||
Sbjct: 220 cgtggtaggagaaacagtcgtggcttcaaggt 251
>gb|BE582355.1|BE582355 NXCI_032_D07_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_032_D07 5' similar to Arabidopsis
thaliana sequence At3g05590 putative 60S ribosomal
protein L18 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 348
Score = 85.7 bits (43), Expect = 3e-015
Identities = 154/191 (80%)
Strand = Plus / Plus
Query: 455 cagcttgctcttcgtgctccacttggcgagaacacggtcctcttgaggggccccaagaat 514
|||||||| |||||||| |||||||| ||||||| ||||| ||| | ||||||||||
Sbjct: 14 cagcttgcacttcgtgcaccacttggacagaacacagtcctgttgcgtggccccaagagc 73
Query: 515 gcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcacagccacaccaag 574
|||||||| || | ||||||||| | ||| || || || || ||||||||||| ||
Sbjct: 74 catcgtgaggctgtcaagcactttggaagggcaccaggtgttccccacagccacactaaa 133
Query: 575 ccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcaggaggaacagccgt 634
|| ||||| || || ||||| ||||| || |||| ||||||||| ||||| ||||| |||
Sbjct: 134 ccatatgttcgatctaagggtaggaaatttgagatggctcgtggtaggagaaacagtcgt 193
Query: 635 ggattcaaggt 645
|| ||||||||
Sbjct: 194 ggcttcaaggt 204
>gb|CF472502.1|CF472502 RTDS1_10_D04.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_10_D04_A015 3', mRNA sequence
Length = 590
Score = 85.7 bits (43), Expect = 3e-015
Identities = 154/191 (80%)
Strand = Plus / Plus
Query: 455 cagcttgctcttcgtgctccacttggcgagaacacggtcctcttgaggggccccaagaat 514
|||||||| |||||||| |||||||| ||||||| ||||| ||| | ||||||||||
Sbjct: 6 cagcttgcacttcgtgcaccacttggacagaacacagtcctgttgcgtggccccaagagc 65
Query: 515 gcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcacagccacaccaag 574
|||||||| || | ||||||||| | ||| || || || || ||||||||||| ||
Sbjct: 66 catcgtgaggctgtcaagcactttggaagggcaccaggtgttccccacagccacactaaa 125
Query: 575 ccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcaggaggaacagccgt 634
|| ||||| || || ||||| ||||| || |||| ||||||||| ||||| ||||| |||
Sbjct: 126 ccatatgttcgatctaagggtaggaaatttgagatggctcgtggtaggagaaacagtcgt 185
Query: 635 ggattcaaggt 645
|| ||||||||
Sbjct: 186 ggcttcaaggt 196
>gb|CF664209.1|CF664209 RTCNT1_8_D12.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_8_D12_A029 3', mRNA sequence
Length = 582
Score = 85.7 bits (43), Expect = 3e-015
Identities = 154/191 (80%)
Strand = Plus / Plus
Query: 455 cagcttgctcttcgtgctccacttggcgagaacacggtcctcttgaggggccccaagaat 514
|||||||| |||||||| |||||||| ||||||| ||||| ||| | ||||||||||
Sbjct: 14 cagcttgcacttcgtgcaccacttggacagaacacagtcctgttgcgtggccccaagagc 73
Query: 515 gcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcacagccacaccaag 574
|||||||| || | ||||||||| | ||| || || || || ||||||||||| ||
Sbjct: 74 catcgtgaggctgtcaagcactttggaagggcaccaggtgttccccacagccacactaaa 133
Query: 575 ccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcaggaggaacagccgt 634
|| ||||| || || ||||| ||||| || |||| ||||||||| ||||| ||||| |||
Sbjct: 134 ccatatgttcgatctaagggtaggaaatttgagatggctcgtggtaggagaaacagtcgt 193
Query: 635 ggattcaaggt 645
|| ||||||||
Sbjct: 194 ggcttcaaggt 204
>gb|BE123552.1|BE123552 NXNV_149_F03_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_149_F03 5' similar to Arabidopsis thaliana
sequence At5g27850 60S ribosomal protein - like see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 310
Score = 83.8 bits (42), Expect = 1e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 39 tacctcaagctcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 98
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 99 aatgcagtgattttaaagaggctgttcatgagcaaaac 136
>gb|BF169553.1|BF169553 NXCI_124_B02_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_124_B02 5' similar to Arabidopsis
thaliana sequence At5g27850 60S ribosomal protein - like
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 378
Score = 83.8 bits (42), Expect = 1e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 107 tacctcaagctcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 166
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 167 aatgcagtgattttaaagaggctgttcatgagcaaaac 204
>gb|BF778329.1|BF778329 NXSI_083_A09_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_083_A09 5' similar to Arabidopsis thaliana
sequence At5g27850 60S ribosomal protein - like see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 423
Score = 83.8 bits (42), Expect = 1e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 107 tacctcaagctcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 166
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 167 aatgcagtgattttaaagaggctgttcatgagcaaaac 204
>gb|BQ654765.1|BQ654765 NXRV085_D02_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV085_D02 5' similar to Arabidopsis thaliana
sequence At5g27850 60S ribosomal protein - like see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 573
Score = 83.8 bits (42), Expect = 1e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 119 tacctcaagctcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 178
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 179 aatgcagtgattttaaagaggctgttcatgagcaaaac 216
>gb|BQ699933.1|BQ699933 NXRV131_F04_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV131_F04 5' similar to Arabidopsis thaliana
sequence At5g27850 60S ribosomal protein - like see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 543
Score = 83.8 bits (42), Expect = 1e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 100 tacctcaagctcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 159
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 160 aatgcagtgattttaaagaggctgttcatgagcaaaac 197
Score = 48.1 bits (24), Expect = 6e-004
Identities = 131/167 (78%)
Strand = Plus / Plus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
||||||||| | || || || |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 376 ggcgagtgcttaaccttcgatcagcttgcacttcgtgcaccacttggacagaacacagtc 435
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
|| ||| | |||||||||| ||||| || || | ||||||||| | ||| || ||
Sbjct: 436 ctgttgcgtggccccaagagccatcgtgangctgtcaagcactttggaagggcaccaggt 495
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaa 600
|| || ||||||||||| || || ||||| || || ||||| |||||
Sbjct: 496 gttccccacagccacactaaaccatatgttcgatctaagggtaggaa 542
>gb|BQ700700.1|BQ700700 NXRV110_B10_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV110_B10 5' similar to Arabidopsis thaliana
sequence At5g27850 60S ribosomal protein - like see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 559
Score = 83.8 bits (42), Expect = 1e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 121 tacctcaagctcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 180
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 181 aatgcagtgattttaaagaggctgttcatgagcaaaac 218
>gb|CF664271.1|CF664271 RTCNT1_8_D12.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_8_D12_A029 5', mRNA sequence
Length = 507
Score = 83.8 bits (42), Expect = 1e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 96 tacctcaagctcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 155
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 156 aatgcagtgattttaaagaggctgttcatgagcaaaac 193
>gb|CX647260.1|CX647260 COLD1_14_F06.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_14_F06_A029 5', mRNA sequence
Length = 468
Score = 83.8 bits (42), Expect = 1e-014
Identities = 84/98 (85%)
Strand = Plus / Plus
Query: 158 tacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaagagcaatttc 217
||||||||||||||||||||||| |||||||| ||||| ||||| ||||| |||| |||
Sbjct: 77 tacctcaagctcctcgtcaagctataccgttttttggtgaggagaaccaatagcagcttc 136
Query: 218 aacgctgtcattctcaagaggcttttcatgagtaaaac 255
|| || || ||| | |||||||| |||||||| |||||
Sbjct: 137 aatgcagtgattttaaagaggctgttcatgagcaaaac 174
>gb|DR112027.1|DR112027 RTS1_25_G12.b1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_25_G12_A029 3', mRNA sequence
Length = 587
Score = 81.8 bits (41), Expect = 5e-014
Identities = 152/189 (80%)
Strand = Plus / Plus
Query: 457 gcttgctcttcgtgctccacttggcgagaacacggtcctcttgaggggccccaagaatgc 516
|||||| |||||||| |||||||| ||||||| ||||| ||| | ||||||||||
Sbjct: 25 gcttgcacttcgtgcaccacttggacagaacacagtcctgttgcgtggccccaagagcca 84
Query: 517 ccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcacagccacaccaagcc 576
|||||||| || | ||||||||| | ||| || || || || ||||||||||| || ||
Sbjct: 85 tcgtgaggctgtcaagcactttggaagggcaccaggtgttccccacagccacactaaacc 144
Query: 577 gtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcaggaggaacagccgtgg 636
||||| || || ||||| ||||| || |||| ||||||||| ||||| ||||| |||||
Sbjct: 145 atatgttcgatctaagggtaggaaatttgagatggctcgtggtaggagaaacagtcgtgg 204
Query: 637 attcaaggt 645
||||||||
Sbjct: 205 cttcaaggt 213
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 99,609
Number of Sequences: 355925
Number of extensions: 99609
Number of successful extensions: 25779
Number of sequences better than 0.5: 147
Number of HSP's better than 0.5 without gapping: 145
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 25571
Number of HSP's gapped (non-prelim): 210
length of query: 905
length of database: 217,277,237
effective HSP length: 19
effective length of query: 886
effective length of database: 210,514,662
effective search space: 186515990532
effective search space used: 186515990532
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)