BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2192958.2.3
(1681 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF395787.1|CF395787 RTDS2_17_A05.g1_A021 Drought-stresse... 80 3e-013
gb|CF473569.1|CF473569 RTWW2_3_F06.g1_A021 Well-watered lob... 80 3e-013
gb|CF475049.1|CF475049 RTWW2_5_F07.g1_A021 Well-watered lob... 80 3e-013
gb|CF667373.1|CF667373 RTCNT1_29_G06.g1_A029 Root control P... 80 3e-013
gb|CO364302.1|CO364302 RTK1_14_H10.g1_A029 Roots minus pota... 80 3e-013
gb|CO364533.1|CO364533 RTK1_16_F09.b1_A029 Roots minus pota... 80 3e-013
gb|CO365638.1|CO365638 RTK1_18_G01.b1_A029 Roots minus pota... 80 3e-013
gb|CO366611.1|CO366611 RTK1_28_H11.g1_A029 Roots minus pota... 80 3e-013
gb|CO366806.1|CO366806 RTK1_30_F01.b1_A029 Roots minus pota... 80 3e-013
gb|CV032615.1|CV032615 RTNACL1_17_G06.b1_A029 Roots plus ad... 80 3e-013
gb|CX713080.1|CX713080 RTPQ1_6_H02.g1_A032 Roots treated wi... 80 3e-013
gb|DR048975.1|DR048975 RTBOR1_12_A06.g1_A029 Roots plus add... 80 3e-013
gb|DR060019.1|DR060019 RTNIT1_25_E05.b1_A029 Roots minus ni... 80 3e-013
gb|DR079275.1|DR079275 RTFEPL1_10_F02.b1_A029 Roots plus ad... 80 3e-013
gb|DR168806.1|DR168806 RTPHOS1_28_A08.b1_A029 Roots minus p... 80 3e-013
gb|DR388710.1|DR388710 RTHG1_30_B09.b1_A029 Roots plus adde... 80 3e-013
gb|DR688764.1|DR688764 EST1078849 Normalized pine embryo li... 80 3e-013
gb|DR695054.1|DR695054 EST1085147 Normalized pine embryo li... 80 3e-013
gb|CF389500.1|CF389500 RTDR2_7_F04.g1_A021 Loblolly pine ro... 78 1e-012
gb|CO200960.1|CO200960 RTCNT2_2_E08.g1_A029 Root control 2 ... 78 1e-012
gb|CX715248.1|CX715248 RTPQ1_32_H07.g1_A032 Roots treated w... 78 1e-012
gb|DR161623.1|DR161623 RTFE1_12_H10.g1_A029 Roots minus iro... 74 2e-011
gb|CO165319.1|CO165319 FLD1_53_F10.g1_A029 Root flooded Pin... 72 8e-011
gb|DR682449.1|DR682449 EST1072524 Normalized pine embryo li... 72 8e-011
gb|BX249446.1|BX249446 BX249446 Pinus pinaster differenciat... 70 3e-010
gb|BX252596.1|BX252596 BX252596 Pinus pinaster differenciat... 70 3e-010
gb|CF390139.1|CF390139 RTDR2_12_E04.g1_A021 Loblolly pine r... 70 3e-010
gb|CF473550.1|CF473550 RTWW2_3_H01.g1_A021 Well-watered lob... 70 3e-010
gb|CF669350.1|CF669350 RTCNT1_42_F05.g1_A029 Root control P... 70 3e-010
gb|CO176666.1|CO176666 NDL1_63_A09.g1_A029 Needles control ... 70 3e-010
gb|CO364076.1|CO364076 RTK1_13_C01.g1_A029 Roots minus pota... 70 3e-010
gb|CO368425.1|CO368425 RTK1_40_C07.g1_A029 Roots minus pota... 70 3e-010
gb|CV033965.1|CV033965 RTNACL1_37_E07.g1_A029 Roots plus ad... 70 3e-010
gb|CV034654.1|CV034654 RTNACL1_10_E02.g1_A029 Roots plus ad... 70 3e-010
gb|CX646771.1|CX646771 COLD1_11_A08.g1_A029 Root cold Pinus... 70 3e-010
gb|CX651299.1|CX651299 COLD1_51_A08.g1_A029 Root cold Pinus... 70 3e-010
gb|DR060009.1|DR060009 RTNIT1_25_D07.b1_A029 Roots minus ni... 70 3e-010
gb|DR089543.1|DR089543 RTAL1_9_H03.b1_A029 Roots plus added... 70 3e-010
gb|DR117184.1|DR117184 RTMG1_5_G03.b1_A029 Roots minus magn... 70 3e-010
gb|DR117389.1|DR117389 RTMG1_6_E04.g1_A029 Roots minus magn... 70 3e-010
gb|DR163547.1|DR163547 RTFE1_43_C01.g1_A029 Roots minus iro... 70 3e-010
gb|DR182342.1|DR182342 RTMNUT1_44_A01.g1_A029 Roots minus m... 70 3e-010
gb|DR387999.1|DR387999 RTHG1_25_C04.g1_A029 Roots plus adde... 70 3e-010
gb|AA556894.1|AA556894 736 Loblolly pine C Pinus taeda cDNA... 68 1e-009
gb|DR047440.1|DR047440 RTBOR1_1_C05.b1_A029 Roots plus adde... 68 1e-009
gb|BE123609.1|BE123609 NXNV_146_C11_F Nsf Xylem Normal wood... 66 5e-009
gb|CF479400.1|CF479400 RTWW3_23_B10.g1_A022 Well-watered lo... 66 5e-009
gb|CV033295.1|CV033295 RTNACL1_33_D06.g1_A029 Roots plus ad... 66 5e-009
gb|DN633740.1|DN633740 EST984556 Subtracted pine embryo lib... 64 2e-008
gb|DN633945.1|DN633945 EST984761 Subtracted pine embryo lib... 64 2e-008
gb|DN634184.1|DN634184 EST985000 Subtracted pine embryo lib... 64 2e-008
gb|DT630485.1|DT630485 EST1154897 Subtracted pine embryo li... 64 2e-008
gb|BX252900.1|BX252900 BX252900 Pinus pinaster differenciat... 62 8e-008
gb|DR109755.1|DR109755 RTS1_4_B05.g1_A029 Roots minus sulfu... 62 8e-008
gb|CO172429.1|CO172429 NDL1_29_E03.g1_A029 Needles control ... 60 3e-007
gb|CO174583.1|CO174583 NDL1_44_H05.g1_A029 Needles control ... 60 3e-007
gb|CO362352.1|CO362352 RTK1_3_B12.b1_A029 Roots minus potas... 60 3e-007
gb|CX713959.1|CX713959 RTPQ1_15_C12.g1_A032 Roots treated w... 60 3e-007
gb|DN626434.1|DN626434 EST977250 Subtracted pine embryo lib... 60 3e-007
gb|DN627235.1|DN627235 EST978051 Subtracted pine embryo lib... 60 3e-007
gb|DN629909.1|DN629909 EST980725 Subtracted pine embryo lib... 60 3e-007
gb|DN630200.1|DN630200 EST981016 Subtracted pine embryo lib... 60 3e-007
gb|DN631439.1|DN631439 EST982255 Subtracted pine embryo lib... 60 3e-007
gb|DN631879.1|DN631879 EST982695 Subtracted pine embryo lib... 60 3e-007
gb|DN632035.1|DN632035 EST982851 Subtracted pine embryo lib... 60 3e-007
gb|DN632324.1|DN632324 EST983140 Subtracted pine embryo lib... 60 3e-007
gb|DN633318.1|DN633318 EST984134 Subtracted pine embryo lib... 60 3e-007
gb|DR177127.1|DR177127 RTMNUT1_3_G04.b1_A029 Roots minus mi... 60 3e-007
gb|BI397729.1|BI397729 NXPV_104_F04_F NXPV (Nsf Xylem Plani... 58 1e-006
gb|DN632290.1|DN632290 EST983106 Subtracted pine embryo lib... 58 1e-006
gb|DT630232.1|DT630232 EST1154644 Subtracted pine embryo li... 58 1e-006
gb|AW754622.1|AW754622 PC04D07 Pine TriplEx pollen cone lib... 56 5e-006
gb|BF517796.1|BF517796 NXSI_031_C12_F NXSI (Nsf Xylem Side ... 56 5e-006
gb|BQ696482.1|BQ696482 NXPV_041_G09_F NXPV (Nsf Xylem Plani... 56 5e-006
gb|CO165239.1|CO165239 FLD1_53_F10.b1_A029 Root flooded Pin... 56 5e-006
gb|CO165967.1|CO165967 FLD1_58_H07.b1_A029 Root flooded Pin... 56 5e-006
gb|CO174494.1|CO174494 NDL1_44_H05.b1_A029 Needles control ... 56 5e-006
gb|CO365720.1|CO365720 RTK1_18_G01.g1_A029 Roots minus pota... 56 5e-006
gb|CO366239.1|CO366239 RTK1_26_E05.g1_A029 Roots minus pota... 56 5e-006
gb|CO366526.1|CO366526 RTK1_28_H11.b1_A029 Roots minus pota... 56 5e-006
gb|CO366880.1|CO366880 RTK1_30_F01.g1_A029 Roots minus pota... 56 5e-006
gb|CV032482.1|CV032482 RTNACL1_8_B01.g1_A029 Roots plus add... 56 5e-006
gb|CV035015.1|CV035015 RTNACL1_13_C12.b1_A029 Roots plus ad... 56 5e-006
gb|CV036339.1|CV036339 RTNACL1_58_C04.g1_A029 Roots plus ad... 56 5e-006
gb|CX715196.1|CX715196 RTPQ1_32_H07.b1_A032 Roots treated w... 56 5e-006
gb|DN627012.1|DN627012 EST977828 Subtracted pine embryo lib... 56 5e-006
gb|DN627586.1|DN627586 EST978402 Subtracted pine embryo lib... 56 5e-006
gb|DN629335.1|DN629335 EST980151 Subtracted pine embryo lib... 56 5e-006
gb|DN629372.1|DN629372 EST980188 Subtracted pine embryo lib... 56 5e-006
gb|DN629853.1|DN629853 EST980669 Subtracted pine embryo lib... 56 5e-006
gb|DN632951.1|DN632951 EST983767 Subtracted pine embryo lib... 56 5e-006
gb|DN633510.1|DN633510 EST984326 Subtracted pine embryo lib... 56 5e-006
gb|DR014382.1|DR014382 HEAT1_49_D08.b1_A029 Root at 37 C fo... 56 5e-006
gb|DR014461.1|DR014461 HEAT1_49_D08.g1_A029 Root at 37 C fo... 56 5e-006
gb|DR014726.1|DR014726 HEAT1_51_F07.b1_A029 Root at 37 C fo... 56 5e-006
gb|DR014810.1|DR014810 HEAT1_51_F07.g1_A029 Root at 37 C fo... 56 5e-006
gb|DR048804.1|DR048804 RTBOR1_11_H04.b1_A029 Roots plus add... 56 5e-006
gb|DR048894.1|DR048894 RTBOR1_12_A06.b1_A029 Roots plus add... 56 5e-006
gb|DR060098.1|DR060098 RTNIT1_25_E05.g1_A029 Roots minus ni... 56 5e-006
gb|DR116528.1|DR116528 RTMG1_1_C01.b1_A029 Roots minus magn... 56 5e-006
gb|DR116965.1|DR116965 RTMG1_3_H01.g1_A029 Roots minus magn... 56 5e-006
gb|DR117253.1|DR117253 RTMG1_5_G03.g1_A029 Roots minus magn... 56 5e-006
gb|DR119412.1|DR119412 RTMG1_23_C12.b1_A029 Roots minus mag... 56 5e-006
gb|DR119493.1|DR119493 RTMG1_23_C12.g1_A029 Roots minus mag... 56 5e-006
gb|DR119658.1|DR119658 RTMG1_24_D08.g1_A029 Roots minus mag... 56 5e-006
gb|DR120523.1|DR120523 RTMG1_30_F12.b1_A029 Roots minus mag... 56 5e-006
gb|DR120647.1|DR120647 RTMG1_31_C05.b1_A029 Roots minus mag... 56 5e-006
gb|DR120732.1|DR120732 RTMG1_31_C05.g1_A029 Roots minus mag... 56 5e-006
gb|DR160254.1|DR160254 RTFE1_5_A04.b1_A029 Roots minus iron... 56 5e-006
gb|DR164012.1|DR164012 RTFE1_46_G06.b1_A029 Roots minus iro... 56 5e-006
gb|DR164102.1|DR164102 RTFE1_46_G06.g1_A029 Roots minus iro... 56 5e-006
gb|DR167506.1|DR167506 RTPHOS1_19_F09.b1_A029 Roots minus p... 56 5e-006
gb|DR168006.1|DR168006 RTPHOS1_22_C09.g1_A029 Roots minus p... 56 5e-006
gb|DR168878.1|DR168878 RTPHOS1_28_A08.g1_A029 Roots minus p... 56 5e-006
gb|DR177160.1|DR177160 RTMNUT1_3_B06.g1_A029 Roots minus mi... 56 5e-006
gb|DR179639.1|DR179639 RTMNUT1_23_H08.b2_A029 Roots minus m... 56 5e-006
gb|DR181777.1|DR181777 RTMNUT1_41_A08.b1_A029 Roots minus m... 56 5e-006
gb|DR181859.1|DR181859 RTMNUT1_41_A08.g1_A029 Roots minus m... 56 5e-006
gb|DR386746.1|DR386746 RTHG1_17_E09.b1_A029 Roots plus adde... 56 5e-006
gb|DR388505.1|DR388505 RTHG1_28_E04.g1_A029 Roots plus adde... 56 5e-006
gb|DR742208.1|DR742208 RTCU1_2_B07.g1_A029 Roots plus added... 56 5e-006
gb|AW064596.1|AW064596 ST33D09 Pine TriplEx shoot tip libra... 54 2e-005
gb|AW290522.1|AW290522 NXNV025B05F Nsf Xylem Normal wood Ve... 54 2e-005
gb|AL750379.1|AL750379 AL750379 RN Pinus pinaster cDNA clon... 54 2e-005
gb|BE187292.1|BE187292 NXNV_162_B07_F Nsf Xylem Normal wood... 54 2e-005
gb|BF010499.1|BF010499 NXCI_084_G05_F NXCI (Nsf Xylem Compr... 54 2e-005
gb|BQ655596.1|BQ655596 NXRV096_F06_F NXRV (Nsf Xylem Root w... 54 2e-005
gb|BQ703111.1|BQ703111 NXSI_136_F02_F NXSI (Nsf Xylem Side ... 54 2e-005
gb|CD027181.1|CD027181 NXNV025B05 Nsf Xylem Normal wood Ver... 54 2e-005
gb|CF391391.1|CF391391 RTDR3_1_C05.g1_A022 Loblolly pine ro... 54 2e-005
gb|CF394822.1|CF394822 RTDS2_7_D02.g1_A021 Drought-stressed... 54 2e-005
gb|CF473787.1|CF473787 RTWW2_4_C01.g1_A021 Well-watered lob... 54 2e-005
gb|CF666231.1|CF666231 RTCNT1_21_G03.g1_A029 Root control P... 54 2e-005
gb|CF669306.1|CF669306 RTCNT1_42_F05.b1_A029 Root control P... 54 2e-005
gb|BX679813.1|BX679813 BX679813 RS Pinus pinaster cDNA clon... 54 2e-005
gb|BX680731.1|BX680731 BX680731 RS Pinus pinaster cDNA clon... 54 2e-005
gb|BX682860.1|BX682860 BX682860 Pinus pinaster differenciat... 54 2e-005
gb|CO160604.1|CO160604 FLD1_22_E10.b1_A029 Root flooded Pin... 54 2e-005
gb|CO164513.1|CO164513 FLD1_48_B06.g1_A029 Root flooded Pin... 54 2e-005
gb|CO199803.1|CO199803 GEO2_3_C10.g1_A032 Root gravitropism... 54 2e-005
gb|CO200173.1|CO200173 GEO2_5_G10.g1_A032 Root gravitropism... 54 2e-005
gb|CO200386.1|CO200386 GEO2_7_D06.b1_A032 Root gravitropism... 54 2e-005
gb|CO200466.1|CO200466 GEO2_7_D06.g1_A032 Root gravitropism... 54 2e-005
gb|CO368344.1|CO368344 RTK1_40_C07.b1_A029 Roots minus pota... 54 2e-005
gb|CO369749.1|CO369749 RTK1_53_A10.g1_A029 Roots minus pota... 54 2e-005
gb|CV031546.1|CV031546 RTNACL1_2_F04.b1_A029 Roots plus add... 54 2e-005
gb|CV034587.1|CV034587 RTNACL1_10_E02.b1_A029 Roots plus ad... 54 2e-005
gb|CX646699.1|CX646699 COLD1_11_A08.b1_A029 Root cold Pinus... 54 2e-005
gb|DR015705.1|DR015705 STRS1_5_D07.b1_A034 Shoot tip pitch ... 54 2e-005
gb|DR015708.1|DR015708 STRS1_5_D10.b1_A034 Shoot tip pitch ... 54 2e-005
gb|DR021043.1|DR021043 STRS1_42_A09.b1_A034 Shoot tip pitch... 54 2e-005
gb|DR021115.1|DR021115 STRS1_42_A09.g1_A034 Shoot tip pitch... 54 2e-005
gb|DR022907.1|DR022907 STRS1_54_F08.b1_A034 Shoot tip pitch... 54 2e-005
gb|DR052867.1|DR052867 RTCA1_7_A02.g1_A029 Roots minus calc... 54 2e-005
gb|DR053629.1|DR053629 RTCA1_12_H03.b1_A029 Roots minus cal... 54 2e-005
gb|DR054962.1|DR054962 RTCA1_20_E04.g1_A029 Roots minus cal... 54 2e-005
gb|DR057637.1|DR057637 RTNIT1_7_A05.b1_A029 Roots minus nit... 54 2e-005
gb|DR060091.1|DR060091 RTNIT1_25_D07.g1_A029 Roots minus ni... 54 2e-005
gb|DR090668.1|DR090668 RTAL1_16_D08.g1_A029 Roots plus adde... 54 2e-005
gb|DR100578.1|DR100578 STRR1_65_E10.b1_A033 Stem Response R... 54 2e-005
gb|DR109404.1|DR109404 RTS1_1_F11.g1_A029 Roots minus sulfu... 54 2e-005
gb|DR163460.1|DR163460 RTFE1_43_C01.b1_A029 Roots minus iro... 54 2e-005
gb|DR179282.1|DR179282 RTMNUT1_21_D06.b2_A029 Roots minus m... 54 2e-005
gb|DR388534.1|DR388534 RTHG1_28_G10.g1_A029 Roots plus adde... 54 2e-005
gb|BG275137.1|BG275137 NXSI_140_C06_F NXSI (Nsf Xylem Side ... 52 8e-005
gb|BG833034.1|BG833034 NXPV_088_C02_F NXPV (Nsf Xylem Plani... 52 8e-005
gb|BQ702053.1|BQ702053 NXSI_123_G11_F NXSI (Nsf Xylem Side ... 52 8e-005
gb|BQ702261.1|BQ702261 NXSI_126_E12_F NXSI (Nsf Xylem Side ... 52 8e-005
gb|BQ702345.1|BQ702345 NXSI_127_F04_F NXSI (Nsf Xylem Side ... 52 8e-005
gb|BX681362.1|BX681362 BX681362 RS Pinus pinaster cDNA clon... 52 8e-005
gb|CO172351.1|CO172351 NDL1_29_E03.b1_A029 Needles control ... 52 8e-005
gb|CV036284.1|CV036284 RTNACL1_58_C04.b1_A029 Roots plus ad... 52 8e-005
gb|DR049935.1|DR049935 RTBOR1_20_C11.b1_A029 Roots plus add... 52 8e-005
gb|DR116882.1|DR116882 RTMG1_3_H01.b1_A029 Roots minus magn... 52 8e-005
gb|DR160339.1|DR160339 RTFE1_5_A04.g1_A029 Roots minus iron... 52 8e-005
gb|AW984855.1|AW984855 NXNV_119_D12_F Nsf Xylem Normal wood... 50 3e-004
gb|BG318920.1|BG318920 NXPV_021_E01_F NXPV (Nsf Xylem Plani... 50 3e-004
gb|BG318962.1|BG318962 NXPV_021_H11_F NXPV (Nsf Xylem Plani... 50 3e-004
gb|BI643932.1|BI643932 NXPV_129_E11_F NXPV (Nsf Xylem Plani... 50 3e-004
gb|BM157616.1|BM157616 NXLV_023_C12_F NXLV (Nsf Xylem Late ... 50 3e-004
gb|BQ696007.1|BQ696007 NXPV_035_D01_F NXPV (Nsf Xylem Plani... 50 3e-004
gb|BQ696579.1|BQ696579 NXPV_042_H06_F NXPV (Nsf Xylem Plani... 50 3e-004
gb|BQ696893.1|BQ696893 NXPV_046_F01_F NXPV (Nsf Xylem Plani... 50 3e-004
gb|BQ697630.1|BQ697630 NXPV_059_A01_F NXPV (Nsf Xylem Plani... 50 3e-004
gb|BQ697854.1|BQ697854 NXPV_061_F10_F NXPV (Nsf Xylem Plani... 50 3e-004
gb|BQ698557.1|BQ698557 NXPV_071_D05_F NXPV (Nsf Xylem Plani... 50 3e-004
gb|CF389385.1|CF389385 RTDR2_7_F04.b1_A021 Loblolly pine ro... 50 3e-004
gb|CF473526.1|CF473526 RTWW2_3_F06.b2_A021 Well-watered lob... 50 3e-004
gb|CF475025.1|CF475025 RTWW2_5_F07.b1_A021 Well-watered lob... 50 3e-004
gb|CF667296.1|CF667296 RTCNT1_29_G06.b1_A029 Root control P... 50 3e-004
gb|BX678604.1|BX678604 BX678604 RS Pinus pinaster cDNA clon... 50 3e-004
gb|BX681192.1|BX681192 BX681192 RS Pinus pinaster cDNA clon... 50 3e-004
gb|CO364214.1|CO364214 RTK1_14_H10.b1_A029 Roots minus pota... 50 3e-004
gb|CO364617.1|CO364617 RTK1_16_F09.g1_A029 Roots minus pota... 50 3e-004
gb|CO366945.1|CO366945 RTK1_31_E03.b1_A029 Roots minus pota... 50 3e-004
gb|CV032418.1|CV032418 RTNACL1_8_B01.b1_A029 Roots plus add... 50 3e-004
gb|CV034642.1|CV034642 RTNACL1_10_C11.g1_A029 Roots plus ad... 50 3e-004
gb|CX713004.1|CX713004 RTPQ1_6_H02.b1_A032 Roots treated wi... 50 3e-004
gb|CX714743.1|CX714743 RTPQ1_26_F01.b1_A032 Roots treated w... 50 3e-004
gb|DR089187.1|DR089187 RTAL1_7_C08.b1_A029 Roots plus added... 50 3e-004
gb|DR089261.1|DR089261 RTAL1_7_C08.g1_A029 Roots plus added... 50 3e-004
gb|DR118098.1|DR118098 RTMG1_11_D01.b1_A029 Roots minus mag... 50 3e-004
gb|DR161713.1|DR161713 RTFE1_13_B03.g1_A029 Roots minus iro... 50 3e-004
gb|DR161884.1|DR161884 RTFE1_14_B03.g1_A029 Roots minus iro... 50 3e-004
gb|DR167936.1|DR167936 RTPHOS1_22_C09.b1_A029 Roots minus p... 50 3e-004
gb|DR177087.1|DR177087 RTMNUT1_3_B06.b1_A029 Roots minus mi... 50 3e-004
gb|DR177206.1|DR177206 RTMNUT1_3_G04.g1_A029 Roots minus mi... 50 3e-004
gb|DR742143.1|DR742143 RTCU1_2_B07.b1_A029 Roots plus added... 50 3e-004
gb|AW981550.1|AW981550 PC13H10 Pine TriplEx pollen cone lib... 48 0.001
gb|DR386756.1|DR386756 RTHG1_17_F07.b1_A029 Roots plus adde... 48 0.001
gb|BM427813.1|BM427813 NXRV_003_F06_F NXRV (Nsf Xylem Root ... 46 0.005
gb|CX649579.1|CX649579 COLD1_36_D11.b1_A029 Root cold Pinus... 46 0.005
gb|CX714077.1|CX714077 RTPQ1_17_G07.b1_A032 Roots treated w... 46 0.005
gb|AL751172.1|AL751172 AL751172 RS Pinus pinaster cDNA clon... 44 0.018
gb|CD016396.1|CD016396 NXCI_043_A05_F NXCI (Nsf Xylem Compr... 44 0.018
gb|CO164553.1|CO164553 FLD1_48_F11.g1_A029 Root flooded Pin... 44 0.018
gb|DR161800.1|DR161800 RTFE1_14_B03.b1_A029 Roots minus iro... 44 0.018
gb|AW290737.1|AW290737 NXNV046D06F Nsf Xylem Normal wood Ve... 42 0.073
gb|BF186264.1|BF186264 NXCI_135_C06_F NXCI (Nsf Xylem Compr... 42 0.073
gb|BM367324.1|BM367324 NXLV_047_G03_F NXLV (Nsf Xylem Late ... 42 0.073
gb|BQ290662.1|BQ290662 NXRV048_A07_F NXRV (Nsf Xylem Root w... 42 0.073
gb|CD027403.1|CD027403 NXNV046D06 Nsf Xylem Normal wood Ver... 42 0.073
gb|CO200086.1|CO200086 GEO2_5_G10.b1_A032 Root gravitropism... 42 0.073
gb|DR049412.1|DR049412 RTBOR1_16_G03.b1_A029 Roots plus add... 42 0.073
gb|DR161633.1|DR161633 RTFE1_13_B03.b1_A029 Roots minus iro... 42 0.073
gb|BI077381.1|BI077381 NXPV_096_F05_F NXPV (Nsf Xylem Plani... 40 0.29
gb|CX715802.1|CX715802 RTPQ1_36_D03.g1_A032 Roots treated w... 40 0.29
>gb|CF395787.1|CF395787 RTDS2_17_A05.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_17_A05_A021 5', mRNA sequence
Length = 708
Score = 79.8 bits (40), Expect = 3e-013
Identities = 322/414 (77%), Gaps = 9/414 (2%)
Strand = Plus / Minus
Query: 1146 tgaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacag 1205
|||||| ||||||||||| || || || ||||| || ||||| || ||| | || || ||
Sbjct: 511 tgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgagatag 452
Query: 1206 agagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaac 1265
|| | |||||||||||| |||||||| | || |||| || ||||||| || |||||
Sbjct: 451 tgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggtgaac 392
Query: 1266 cacatcatctccccgccgttgccttctg---cccctactgctgccacctccaaaagggct 1322
||||| || || | || |||||||| | ||||| ||||| |||||||||||||| |
Sbjct: 391 aacatcttcgcctctcctttgccttcgggttcccctgctgctaccacctccaaaaggatt 332
Query: 1323 tccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcc 1382
||||||| ||||| ||||||||||| ||||| |||||||| || || ||||| ||
Sbjct: 331 tccacca---aagaacgactggaatatatcaaatggatcatg---accgccgccgccacc 278
Query: 1383 cattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtc 1442
|||||| || ||||| |||||||| || || || ||||| || ||||| || ||||| ||
Sbjct: 277 cattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctcaggatc 218
Query: 1443 gctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtc 1502
|| || ||||| || ||||||| || ||||| ||||| || || || || ||||||||
Sbjct: 217 actaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccacccttgtc 158
Query: 1503 ggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtga 1556
|| ||||| ||||| || ||||| | ||| || ||||| | |||||||||||
Sbjct: 157 cggatggtttttgatagcagcctttctgtaagctttcttcaattcatcctgtga 104
Score = 42.1 bits (21), Expect = 0.073
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 985 actttatcacccttgcactgtgggcatct 1013
||||| ||||||||||| |||||||||||
Sbjct: 672 actttttcacccttgcattgtgggcatct 644
>gb|CF473569.1|CF473569 RTWW2_3_F06.g1_A021 Well-watered loblolly pine roots WW2 Pinus taeda
cDNA clone RTWW2_3_F06_A021 5', mRNA sequence
Length = 683
Score = 79.8 bits (40), Expect = 3e-013
Identities = 322/414 (77%), Gaps = 9/414 (2%)
Strand = Plus / Minus
Query: 1146 tgaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacag 1205
|||||| ||||||||||| || || || ||||| || ||||| || ||| | || || ||
Sbjct: 453 tgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgagatag 394
Query: 1206 agagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaac 1265
|| | |||||||||||| |||||||| | || |||| || ||||||| || |||||
Sbjct: 393 tgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggtgaac 334
Query: 1266 cacatcatctccccgccgttgccttctg---cccctactgctgccacctccaaaagggct 1322
||||| || || | || |||||||| | ||||| ||||| |||||||||||||| |
Sbjct: 333 aacatcttcgcctctcctttgccttcgggttcccctgctgctaccacctccaaaaggatt 274
Query: 1323 tccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcc 1382
||||||| ||||| ||||||||||| ||||| |||||||| || || ||||| ||
Sbjct: 273 tccacca---aagaacgactggaatatatcaaatggatcatg---accgccgccgccacc 220
Query: 1383 cattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtc 1442
|||||| || ||||| |||||||| || || || ||||| || ||||| || ||||| ||
Sbjct: 219 cattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctcaggatc 160
Query: 1443 gctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtc 1502
|| || ||||| || ||||||| || ||||| ||||| || || || || ||||||||
Sbjct: 159 actaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccacccttgtc 100
Query: 1503 ggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtga 1556
|| ||||| ||||| || ||||| | ||| || ||||| | |||||||||||
Sbjct: 99 cggatggtttttgatagcagcctttctgtaagctttcttcaattcatcctgtga 46
Score = 42.1 bits (21), Expect = 0.073
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 985 actttatcacccttgcactgtgggcatct 1013
||||| ||||||||||| |||||||||||
Sbjct: 614 actttttcacccttgcattgtgggcatct 586
>gb|CF475049.1|CF475049 RTWW2_5_F07.g1_A021 Well-watered loblolly pine roots WW2 Pinus taeda
cDNA clone RTWW2_5_F07_A021 5', mRNA sequence
Length = 724
Score = 79.8 bits (40), Expect = 3e-013
Identities = 322/414 (77%), Gaps = 9/414 (2%)
Strand = Plus / Minus
Query: 1146 tgaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacag 1205
|||||| ||||||||||| || || || ||||| || ||||| || ||| | || || ||
Sbjct: 606 tgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgagatag 547
Query: 1206 agagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaac 1265
|| | |||||||||||| |||||||| | || |||| || ||||||| || |||||
Sbjct: 546 tgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggtgaac 487
Query: 1266 cacatcatctccccgccgttgccttctg---cccctactgctgccacctccaaaagggct 1322
||||| || || | || |||||||| | ||||| ||||| |||||||||||||| |
Sbjct: 486 aacatcttcgcctctcctttgccttcgggttcccctgctgctaccacctccaaaaggatt 427
Query: 1323 tccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcc 1382
||||||| ||||| ||||||||||| ||||| |||||||| || || ||||| ||
Sbjct: 426 tccacca---aagaacgactggaatatatcaaatggatcatg---accgccgccgccacc 373
Query: 1383 cattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtc 1442
|||||| || ||||| |||||||| || || || ||||| || ||||| || ||||| ||
Sbjct: 372 cattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctcaggatc 313
Query: 1443 gctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtc 1502
|| || ||||| || ||||||| || ||||| ||||| || || || || ||||||||
Sbjct: 312 actaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccacccttgtc 253
Query: 1503 ggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtga 1556
|| ||||| ||||| || ||||| | ||| || ||||| | |||||||||||
Sbjct: 252 cggatggtttttgatagcagcctttctgtaagctttcttcaattcatcctgtga 199
>gb|CF667373.1|CF667373 RTCNT1_29_G06.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_29_G06_A029 5', mRNA sequence
Length = 649
Score = 79.8 bits (40), Expect = 3e-013
Identities = 322/414 (77%), Gaps = 9/414 (2%)
Strand = Plus / Minus
Query: 1146 tgaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacag 1205
|||||| ||||||||||| || || || ||||| || ||||| || ||| | || || ||
Sbjct: 453 tgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgagatag 394
Query: 1206 agagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaac 1265
|| | |||||||||||| |||||||| | || |||| || ||||||| || |||||
Sbjct: 393 tgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggtgaac 334
Query: 1266 cacatcatctccccgccgttgccttctg---cccctactgctgccacctccaaaagggct 1322
||||| || || | || |||||||| | ||||| ||||| |||||||||||||| |
Sbjct: 333 aacatcttcgcctctcctttgccttcgggttcccctgctgctaccacctccaaaaggatt 274
Query: 1323 tccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcc 1382
||||||| ||||| ||||||||||| ||||| |||||||| || || ||||| ||
Sbjct: 273 tccacca---aagaacgactggaatatatcaaatggatcatg---accgccgccgccacc 220
Query: 1383 cattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtc 1442
|||||| || ||||| |||||||| || || || ||||| || ||||| || ||||| ||
Sbjct: 219 cattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctcaggatc 160
Query: 1443 gctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtc 1502
|| || ||||| || ||||||| || ||||| ||||| || || || || ||||||||
Sbjct: 159 actaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccacccttgtc 100
Query: 1503 ggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtga 1556
|| ||||| ||||| || ||||| | ||| || ||||| | |||||||||||
Sbjct: 99 cggatggtttttgatagcagcctttctgtaagctttcttcaattcatcctgtga 46
Score = 42.1 bits (21), Expect = 0.073
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 985 actttatcacccttgcactgtgggcatct 1013
||||| ||||||||||| |||||||||||
Sbjct: 614 actttttcacccttgcattgtgggcatct 586
>gb|CO364302.1|CO364302 RTK1_14_H10.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_14_H10_A029 5', mRNA sequence
Length = 865
Score = 79.8 bits (40), Expect = 3e-013
Identities = 322/414 (77%), Gaps = 9/414 (2%)
Strand = Plus / Minus
Query: 1146 tgaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacag 1205
|||||| ||||||||||| || || || ||||| || ||||| || ||| | || || ||
Sbjct: 487 tgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgagatag 428
Query: 1206 agagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaac 1265
|| | |||||||||||| |||||||| | || |||| || ||||||| || |||||
Sbjct: 427 tgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggtgaac 368
Query: 1266 cacatcatctccccgccgttgccttctg---cccctactgctgccacctccaaaagggct 1322
||||| || || | || |||||||| | ||||| ||||| |||||||||||||| |
Sbjct: 367 aacatcttcgcctctcctttgccttcgggttcccctgctgctaccacctccaaaaggatt 308
Query: 1323 tccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcc 1382
||||||| ||||| ||||||||||| ||||| |||||||| || || ||||| ||
Sbjct: 307 tccacca---aagaacgactggaatatatcaaatggatcatg---accgccgccgccacc 254
Query: 1383 cattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtc 1442
|||||| || ||||| |||||||| || || || ||||| || ||||| || ||||| ||
Sbjct: 253 cattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctcaggatc 194
Query: 1443 gctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtc 1502
|| || ||||| || ||||||| || ||||| ||||| || || || || ||||||||
Sbjct: 193 actaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccacccttgtc 134
Query: 1503 ggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtga 1556
|| ||||| ||||| || ||||| | ||| || ||||| | |||||||||||
Sbjct: 133 cggatggtttttgatagcagcctttctgtaagctttcttcaattcatcctgtga 80
Score = 56.0 bits (28), Expect = 5e-006
Identities = 103/128 (80%)
Strand = Plus / Minus
Query: 823 ccctttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtg 882
|||||||||||||| |||||||||||||| || || | ||||| | || || |||||
Sbjct: 810 ccctttctcttgaatttgggatgctccttttgttgaaccacaaatacaatgtcaccagta 751
Query: 883 acagtgtcaggcgcttcatcagcttcaccagggaatgtgatcttctgcccattctgcatg 942
|| ||||| ||||||||||| ||||| || ||| |||||| |||| ||||| |||||
Sbjct: 750 actgtgtcgggcgcttcatctgcttccccttcgaaagtgatcctctgaccattttgcatt 691
Query: 943 cctttctc 950
|| |||||
Sbjct: 690 cccttctc 683
Score = 42.1 bits (21), Expect = 0.073
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 985 actttatcacccttgcactgtgggcatct 1013
||||| ||||||||||| |||||||||||
Sbjct: 648 actttttcacccttgcattgtgggcatct 620
>gb|CO364533.1|CO364533 RTK1_16_F09.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_16_F09_A029 3', mRNA sequence
Length = 833
Score = 79.8 bits (40), Expect = 3e-013
Identities = 322/414 (77%), Gaps = 9/414 (2%)
Strand = Plus / Plus
Query: 1146 tgaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacag 1205
|||||| ||||||||||| || || || ||||| || ||||| || ||| | || || ||
Sbjct: 290 tgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgagatag 349
Query: 1206 agagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaac 1265
|| | |||||||||||| |||||||| | || |||| || ||||||| || |||||
Sbjct: 350 tgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggtgaac 409
Query: 1266 cacatcatctccccgccgttgccttctg---cccctactgctgccacctccaaaagggct 1322
||||| || || | || |||||||| | ||||| ||||| |||||||||||||| |
Sbjct: 410 aacatcttcgcctctcctttgccttcgggttcccctgctgctaccacctccaaaaggatt 469
Query: 1323 tccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcc 1382
||||||| ||||| ||||||||||| ||||| |||||||| || || ||||| ||
Sbjct: 470 tccacca---aagaacgactggaatatatcaaatggatcatg---accgccgccgccacc 523
Query: 1383 cattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtc 1442
|||||| || ||||| |||||||| || || || ||||| || ||||| || ||||| ||
Sbjct: 524 cattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctcaggatc 583
Query: 1443 gctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtc 1502
|| || ||||| || ||||||| || ||||| ||||| || || || || ||||||||
Sbjct: 584 actaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccacccttgtc 643
Query: 1503 ggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtga 1556
|| ||||| ||||| || ||||| | ||| || ||||| | |||||||||||
Sbjct: 644 cggatggtttttgatagcagcctttctgtaagctttcttcaattcatcctgtga 697
Score = 42.1 bits (21), Expect = 0.073
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 985 actttatcacccttgcactgtgggcatct 1013
||||| ||||||||||| |||||||||||
Sbjct: 129 actttttcacccttgcattgtgggcatct 157
>gb|CO365638.1|CO365638 RTK1_18_G01.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_18_G01_A029 3', mRNA sequence
Length = 806
Score = 79.8 bits (40), Expect = 3e-013
Identities = 322/414 (77%), Gaps = 9/414 (2%)
Strand = Plus / Plus
Query: 1146 tgaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacag 1205
|||||| ||||||||||| || || || ||||| || ||||| || ||| | || || ||
Sbjct: 60 tgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgagatag 119
Query: 1206 agagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaac 1265
|| | |||||||||||| |||||||| | || |||| || ||||||| || |||||
Sbjct: 120 tgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggtgaac 179
Query: 1266 cacatcatctccccgccgttgccttctg---cccctactgctgccacctccaaaagggct 1322
||||| || || | || |||||||| | ||||| ||||| |||||||||||||| |
Sbjct: 180 aacatcttcgcctctcctttgccttcgggttcccctgctgctaccacctccaaaaggatt 239
Query: 1323 tccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcc 1382
||||| ||||||| ||||||||||| ||||| |||||||| || || ||||| ||
Sbjct: 240 tccac---caaagaacgactggaatatatcaaatggatcatg---accgccgccgccacc 293
Query: 1383 cattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtc 1442
|||||| || ||||| |||||||| || || || ||||| || ||||| || ||||| ||
Sbjct: 294 cattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctcaggatc 353
Query: 1443 gctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtc 1502
|| || ||||| || ||||||| || ||||| ||||| || || || || ||||||||
Sbjct: 354 actaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccacccttgtc 413
Query: 1503 ggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtga 1556
|| ||||| ||||| || ||||| | ||| || ||||| | |||||||||||
Sbjct: 414 cggatggtttttgatagcagcctttctgtaagctttcttcaattcatcctgtga 467
>gb|CO366611.1|CO366611 RTK1_28_H11.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_28_H11_A029 5', mRNA sequence
Length = 782
Score = 79.8 bits (40), Expect = 3e-013
Identities = 322/414 (77%), Gaps = 9/414 (2%)
Strand = Plus / Minus
Query: 1146 tgaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacag 1205
|||||| ||||||||||| || || || ||||| || ||||| || ||| | || || ||
Sbjct: 750 tgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgagatag 691
Query: 1206 agagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaac 1265
|| | |||||||||||| |||||||| | || |||| || ||||||| || |||||
Sbjct: 690 tgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggtgaac 631
Query: 1266 cacatcatctccccgccgttgccttctg---cccctactgctgccacctccaaaagggct 1322
||||| || || | || |||||||| | ||||| ||||| |||||||||||||| |
Sbjct: 630 aacatcttcgcctctcctttgccttcgggttcccctgctgctaccacctccaaaaggatt 571
Query: 1323 tccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcc 1382
||||||| ||||| ||||||||||| ||||| |||||||| || || ||||| ||
Sbjct: 570 tccacca---aagaacgactggaatatatcaaatggatcatg---accgccgccgccacc 517
Query: 1383 cattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtc 1442
|||||| || ||||| |||||||| || || || ||||| || ||||| || ||||| ||
Sbjct: 516 cattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctcaggatc 457
Query: 1443 gctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtc 1502
|| || ||||| || ||||||| || ||||| ||||| || || || || ||||||||
Sbjct: 456 actaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccacccttgtc 397
Query: 1503 ggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtga 1556
|| ||||| ||||| || ||||| | ||| || ||||| | |||||||||||
Sbjct: 396 cggatggtttttgatagcagcctttctgtaagctttcttcaattcatcctgtga 343
>gb|CO366806.1|CO366806 RTK1_30_F01.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_30_F01_A029 3', mRNA sequence
Length = 794
Score = 79.8 bits (40), Expect = 3e-013
Identities = 322/414 (77%), Gaps = 9/414 (2%)
Strand = Plus / Plus
Query: 1146 tgaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacag 1205
|||||| ||||||||||| || || || ||||| || ||||| || ||| | || || ||
Sbjct: 34 tgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgagatag 93
Query: 1206 agagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaac 1265
|| | |||||||||||| |||||||| | || |||| || ||||||| || |||||
Sbjct: 94 tgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggtgaac 153
Query: 1266 cacatcatctccccgccgttgccttctg---cccctactgctgccacctccaaaagggct 1322
||||| || || | || |||||||| | ||||| ||||| |||||||||||||| |
Sbjct: 154 aacatcttcgcctctcctttgccttcgggttcccctgctgctaccacctccaaaaggatt 213
Query: 1323 tccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcc 1382
||||||| ||||| ||||||||||| ||||| |||||||| || || ||||| ||
Sbjct: 214 tccacca---aagaacgactggaatatatcaaatggatcatg---accgccgccgccacc 267
Query: 1383 cattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtc 1442
|||||| || ||||| |||||||| || || || ||||| || ||||| || ||||| ||
Sbjct: 268 cattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctcaggatc 327
Query: 1443 gctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtc 1502
|| || ||||| || ||||||| || ||||| ||||| || || || || ||||||||
Sbjct: 328 actaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccacccttgtc 387
Query: 1503 ggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtga 1556
|| ||||| ||||| || ||||| | ||| || ||||| | |||||||||||
Sbjct: 388 cggatggtttttgatagcagcctttctgtaagctttcttcaattcatcctgtga 441
>gb|CV032615.1|CV032615 RTNACL1_17_G06.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_17_G06_A029 3', mRNA sequence
Length = 753
Score = 79.8 bits (40), Expect = 3e-013
Identities = 322/414 (77%), Gaps = 9/414 (2%)
Strand = Plus / Plus
Query: 1146 tgaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacag 1205
|||||| ||||||||||| || || || ||||| || ||||| || ||| | || || ||
Sbjct: 90 tgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgagatag 149
Query: 1206 agagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaac 1265
|| | |||||||||||| |||||||| | || |||| || ||||||| || |||||
Sbjct: 150 tgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggtgaac 209
Query: 1266 cacatcatctccccgccgttgccttctg---cccctactgctgccacctccaaaagggct 1322
||||| || || | || |||||||| | ||||| ||||| |||||||||||||| |
Sbjct: 210 aacatcttcgcctctcctttgccttcgggttcccctgctgctaccacctccaaaaggatt 269
Query: 1323 tccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcc 1382
||||||| ||||| ||||||||||| ||||| |||||||| || || ||||| ||
Sbjct: 270 tccacca---aagaacgactggaatatatcaaatggatcatg---accgccgccgccacc 323
Query: 1383 cattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtc 1442
|||||| || ||||| |||||||| || || || ||||| || ||||| || ||||| ||
Sbjct: 324 cattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctcaggatc 383
Query: 1443 gctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtc 1502
|| || ||||| || ||||||| || ||||| ||||| || || || || ||||||||
Sbjct: 384 actaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccacccttgtc 443
Query: 1503 ggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtga 1556
|| ||||| ||||| || ||||| | ||| || ||||| | |||||||||||
Sbjct: 444 cggatggtttttgatagcagcctttctgtaagctttcttcaattcatcctgtga 497
>gb|CX713080.1|CX713080 RTPQ1_6_H02.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_6_H02_A032 5', mRNA sequence
Length = 653
Score = 79.8 bits (40), Expect = 3e-013
Identities = 322/414 (77%), Gaps = 9/414 (2%)
Strand = Plus / Minus
Query: 1146 tgaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacag 1205
|||||| ||||||||||| || || || ||||| || ||||| || ||| | || || ||
Sbjct: 626 tgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgagatag 567
Query: 1206 agagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaac 1265
|| | |||||||||||| |||||||| | || |||| || ||||||| || |||||
Sbjct: 566 tgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggtgaac 507
Query: 1266 cacatcatctccccgccgttgccttctg---cccctactgctgccacctccaaaagggct 1322
||||| || || | || |||||||| | ||||| ||||| |||||||||||||| |
Sbjct: 506 aacatcttcgcctctcctttgccttcgggttcccctgctgctaccacctccaaaaggatt 447
Query: 1323 tccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcc 1382
||||||| ||||| ||||||||||| ||||| |||||||| || || ||||| ||
Sbjct: 446 tccacca---aagaacgactggaatatatcaaatggatcatg---accgccgccgccacc 393
Query: 1383 cattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtc 1442
|||||| || ||||| |||||||| || || || ||||| || ||||| || ||||| ||
Sbjct: 392 cattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctcaggatc 333
Query: 1443 gctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtc 1502
|| || ||||| || ||||||| || ||||| ||||| || || || || ||||||||
Sbjct: 332 actaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccacccttgtc 273
Query: 1503 ggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtga 1556
|| ||||| ||||| || ||||| | ||| || ||||| | |||||||||||
Sbjct: 272 cggatggtttttgatagcagcctttctgtaagctttcttcaattcatcctgtga 219
>gb|DR048975.1|DR048975 RTBOR1_12_A06.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_12_A06_A029 5', mRNA sequence
Length = 806
Score = 79.8 bits (40), Expect = 3e-013
Identities = 322/414 (77%), Gaps = 9/414 (2%)
Strand = Plus / Minus
Query: 1146 tgaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacag 1205
|||||| ||||||||||| || || || ||||| || ||||| || ||| | || || ||
Sbjct: 701 tgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgagatag 642
Query: 1206 agagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaac 1265
|| | |||||||||||| |||||||| | || |||| || ||||||| || |||||
Sbjct: 641 tgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggtgaac 582
Query: 1266 cacatcatctccccgccgttgccttctg---cccctactgctgccacctccaaaagggct 1322
||||| || || | || |||||||| | ||||| ||||| |||||||||||||| |
Sbjct: 581 aacatcttcgcctctcctttgccttcgggttcccctgctgctaccacctccaaaaggatt 522
Query: 1323 tccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcc 1382
||||||| ||||| ||||||||||| ||||| |||||||| || || ||||| ||
Sbjct: 521 tccacca---aagaacgactggaatatatcaaatggatcatg---accgccgccgccacc 468
Query: 1383 cattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtc 1442
|||||| || ||||| |||||||| || || || ||||| || ||||| || ||||| ||
Sbjct: 467 cattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctcaggatc 408
Query: 1443 gctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtc 1502
|| || ||||| || ||||||| || ||||| ||||| || || || || ||||||||
Sbjct: 407 actaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccacccttgtc 348
Query: 1503 ggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtga 1556
|| ||||| ||||| || ||||| | ||| || ||||| | |||||||||||
Sbjct: 347 cggatggtttttgatagcagcctttctgtaagctttcttcaattcatcctgtga 294
>gb|DR060019.1|DR060019 RTNIT1_25_E05.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_25_E05_A029 3', mRNA sequence
Length = 754
Score = 79.8 bits (40), Expect = 3e-013
Identities = 322/414 (77%), Gaps = 9/414 (2%)
Strand = Plus / Plus
Query: 1146 tgaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacag 1205
|||||| ||||||||||| || || || ||||| || ||||| || ||| | || || ||
Sbjct: 98 tgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgagatag 157
Query: 1206 agagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaac 1265
|| | |||||||||||| |||||||| | || |||| || ||||||| || |||||
Sbjct: 158 tgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggtgaac 217
Query: 1266 cacatcatctccccgccgttgccttctg---cccctactgctgccacctccaaaagggct 1322
||||| || || | || |||||||| | ||||| ||||| |||||||||||||| |
Sbjct: 218 aacatcttcgcctctcctttgccttcgggttcccctgctgctaccacctccaaaaggatt 277
Query: 1323 tccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcc 1382
||||||| ||||| ||||||||||| ||||| |||||||| || || ||||| ||
Sbjct: 278 tccacca---aagaacgactggaatatatcaaatggatcatg---accgccgccgccacc 331
Query: 1383 cattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtc 1442
|||||| || ||||| |||||||| || || || ||||| || ||||| || ||||| ||
Sbjct: 332 cattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctcaggatc 391
Query: 1443 gctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtc 1502
|| || ||||| || ||||||| || ||||| ||||| || || || || ||||||||
Sbjct: 392 actaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccacccttgtc 451
Query: 1503 ggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtga 1556
|| ||||| ||||| || ||||| | ||| || ||||| | |||||||||||
Sbjct: 452 cggatggtttttgatagcagcctttctgtaagctttcttcaattcatcctgtga 505
>gb|DR079275.1|DR079275 RTFEPL1_10_F02.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_10_F02_A029 3', mRNA sequence
Length = 847
Score = 79.8 bits (40), Expect = 3e-013
Identities = 322/414 (77%), Gaps = 9/414 (2%)
Strand = Plus / Minus
Query: 1146 tgaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacag 1205
|||||| ||||||||||| || || || ||||| || ||||| || ||| | || || ||
Sbjct: 657 tgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgagatag 598
Query: 1206 agagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaac 1265
|| | |||||||||||| |||||||| | || |||| || ||||||| || |||||
Sbjct: 597 tgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggtgaac 538
Query: 1266 cacatcatctccccgccgttgccttctg---cccctactgctgccacctccaaaagggct 1322
||||| || || | || |||||||| | ||||| ||||| |||||||||||||| |
Sbjct: 537 aacatcttcgcctctcctttgccttcgggttcccctgctgctaccacctccaaaaggatt 478
Query: 1323 tccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcc 1382
||||||| ||||| ||||||||||| ||||| |||||||| || || ||||| ||
Sbjct: 477 tccacca---aagaacgactggaatatatcaaatggatcatg---accgccgccgccacc 424
Query: 1383 cattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtc 1442
|||||| || ||||| |||||||| || || || ||||| || ||||| || ||||| ||
Sbjct: 423 cattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctcaggatc 364
Query: 1443 gctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtc 1502
|| || ||||| || ||||||| || ||||| ||||| || || || || ||||||||
Sbjct: 363 actaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccacccttgtc 304
Query: 1503 ggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtga 1556
|| ||||| ||||| || ||||| | ||| || ||||| | |||||||||||
Sbjct: 303 cggatggtttttgatagcagcctttctgtaagctttcttcaattcatcctgtga 250
Score = 42.1 bits (21), Expect = 0.073
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 985 actttatcacccttgcactgtgggcatct 1013
||||| ||||||||||| |||||||||||
Sbjct: 818 actttttcacccttgcattgtgggcatct 790
>gb|DR168806.1|DR168806 RTPHOS1_28_A08.b1_A029 Roots minus phosphorous Pinus taeda cDNA clone
RTPHOS1_28_A08_A029 3', mRNA sequence
Length = 784
Score = 79.8 bits (40), Expect = 3e-013
Identities = 322/414 (77%), Gaps = 9/414 (2%)
Strand = Plus / Plus
Query: 1146 tgaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacag 1205
|||||| ||||||||||| || || || ||||| || ||||| || ||| | || || ||
Sbjct: 35 tgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgagatag 94
Query: 1206 agagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaac 1265
|| | |||||||||||| |||||||| | || |||| || ||||||| || |||||
Sbjct: 95 tgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggtgaac 154
Query: 1266 cacatcatctccccgccgttgccttctg---cccctactgctgccacctccaaaagggct 1322
||||| || || | || |||||||| | ||||| ||||| |||||||||||||| |
Sbjct: 155 aacatcttcgcctctcctttgccttcgggttcccctgctgctaccacctccaaaaggatt 214
Query: 1323 tccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcc 1382
|||||| |||||| ||||||||||| ||||| |||||||| || || ||||| ||
Sbjct: 215 tccacc---aaagaacgactggaatatatcaaatggatcatg---accgccgccgccacc 268
Query: 1383 cattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtc 1442
|||||| || ||||| |||||||| || || || ||||| || ||||| || ||||| ||
Sbjct: 269 cattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctcaggatc 328
Query: 1443 gctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtc 1502
|| || ||||| || ||||||| || ||||| ||||| || || || || ||||||||
Sbjct: 329 actaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccacccttgtc 388
Query: 1503 ggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtga 1556
|| ||||| ||||| || ||||| | ||| || ||||| | |||||||||||
Sbjct: 389 cggatggtttttgatagcagcctttctgtaagctttcttcaattcatcctgtga 442
>gb|DR388710.1|DR388710 RTHG1_30_B09.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_30_B09_A029 3', mRNA sequence
Length = 799
Score = 79.8 bits (40), Expect = 3e-013
Identities = 322/414 (77%), Gaps = 9/414 (2%)
Strand = Plus / Plus
Query: 1146 tgaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacag 1205
|||||| ||||||||||| || || || ||||| || ||||| || ||| | || || ||
Sbjct: 310 tgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgagatag 369
Query: 1206 agagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaac 1265
|| | |||||||||||| |||||||| | || |||| || ||||||| || |||||
Sbjct: 370 tgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggtgaac 429
Query: 1266 cacatcatctccccgccgttgccttctg---cccctactgctgccacctccaaaagggct 1322
||||| || || | || |||||||| | ||||| ||||| |||||||||||||| |
Sbjct: 430 aacatcttcgcctctcctttgccttcgggttcccctgctgctaccacctccaaaaggatt 489
Query: 1323 tccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcc 1382
||||||| ||||| ||||||||||| ||||| |||||||| || || ||||| ||
Sbjct: 490 tccacca---aagaacgactggaatatatcaaatggatcatg---accgccgccgccacc 543
Query: 1383 cattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtc 1442
|||||| || ||||| |||||||| || || || ||||| || ||||| || ||||| ||
Sbjct: 544 cattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctcaggatc 603
Query: 1443 gctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtc 1502
|| || ||||| || ||||||| || ||||| ||||| || || || || ||||||||
Sbjct: 604 actaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccacccttgtc 663
Query: 1503 ggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtga 1556
|| ||||| ||||| || ||||| | ||| || ||||| | |||||||||||
Sbjct: 664 cggatggtttttgatagcagcctttctgtaagctttcttcaattcatcctgtga 717
Score = 42.1 bits (21), Expect = 0.073
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 985 actttatcacccttgcactgtgggcatct 1013
||||| ||||||||||| |||||||||||
Sbjct: 149 actttttcacccttgcattgtgggcatct 177
>gb|DR688764.1|DR688764 EST1078849 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACA31 3' end, mRNA sequence
Length = 662
Score = 79.8 bits (40), Expect = 3e-013
Identities = 322/414 (77%), Gaps = 9/414 (2%)
Strand = Plus / Minus
Query: 1146 tgaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacag 1205
|||||| ||||||||||| || || || ||||| || ||||| || ||| | || || ||
Sbjct: 565 tgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgagatag 506
Query: 1206 agagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaac 1265
|| | |||||||||||| |||||||| | || |||| || ||||||| || |||||
Sbjct: 505 tgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggtgaac 446
Query: 1266 cacatcatctccccgccgttgccttctg---cccctactgctgccacctccaaaagggct 1322
||||| || || | || |||||||| | ||||| ||||| |||||||||||||| |
Sbjct: 445 aacatcttcgcctctcctttgccttcgggttcccctgctgctaccacctccaaaaggatt 386
Query: 1323 tccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcc 1382
||||||| ||||| ||||||||||| ||||| |||||||| || || ||||| ||
Sbjct: 385 tccacca---aagaacgactggaatatatcaaatggatcatg---accgccgccgccacc 332
Query: 1383 cattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtc 1442
|||||| || ||||| |||||||| || || || ||||| || ||||| || ||||| ||
Sbjct: 331 cattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctcaggatc 272
Query: 1443 gctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtc 1502
|| || ||||| || ||||||| || ||||| ||||| || || || || ||||||||
Sbjct: 271 actaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccacccttgtc 212
Query: 1503 ggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtga 1556
|| ||||| ||||| || ||||| | ||| || ||||| | |||||||||||
Sbjct: 211 cggatggtttttgatagcagcctttctgtaagctttcttcaattcatcctgtga 158
>gb|DR695054.1|DR695054 EST1085147 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEJ90 3' end, mRNA sequence
Length = 814
Score = 79.8 bits (40), Expect = 3e-013
Identities = 322/414 (77%), Gaps = 9/414 (2%)
Strand = Plus / Minus
Query: 1146 tgaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacag 1205
|||||| ||||||||||| || || || ||||| || ||||| || ||| | || || ||
Sbjct: 674 tgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgagatag 615
Query: 1206 agagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaac 1265
|| | |||||||||||| |||||||| | || |||| || ||||||| || |||||
Sbjct: 614 tgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggtgaac 555
Query: 1266 cacatcatctccccgccgttgccttctg---cccctactgctgccacctccaaaagggct 1322
||||| || || | || |||||||| | ||||| ||||| |||||||||||||| |
Sbjct: 554 aacatcttcgcctctcctttgccttcgggttcccctgctgctaccacctccaaaaggatt 495
Query: 1323 tccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcc 1382
||||||| ||||| ||||||||||| ||||| |||||||| || || ||||| ||
Sbjct: 494 tccacca---aagaacgactggaatatatcaaatggatcatg---accgccgccgccacc 441
Query: 1383 cattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtc 1442
|||||| || ||||| |||||||| || || || ||||| || ||||| || ||||| ||
Sbjct: 440 cattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctcaggatc 381
Query: 1443 gctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtc 1502
|| || ||||| || ||||||| || ||||| ||||| || || || || ||||||||
Sbjct: 380 actaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccacccttgtc 321
Query: 1503 ggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtga 1556
|| ||||| ||||| || ||||| | ||| || ||||| | |||||||||||
Sbjct: 320 cggatggtttttgatagcagcctttctgtaagctttcttcaattcatcctgtga 267
>gb|CF389500.1|CF389500 RTDR2_7_F04.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_7_F04_A021 5', mRNA sequence
Length = 756
Score = 77.8 bits (39), Expect = 1e-012
Identities = 208/263 (79%), Gaps = 6/263 (2%)
Strand = Plus / Minus
Query: 1294 cccctactgctgccacctccaaaagggcttccaccaccaaagaatgactggaatatgtca 1353
||||| ||||| |||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 496 cccctgctgctaccacctccaaaaggatttccacca---aagaacgactggaatatatca 440
Query: 1354 aagggatcatgcatcccaccaccgcctcccattccctccttgagggcatcctcaccatat 1413
|| |||||||| || || ||||| |||||||| || ||||| |||||||| || ||
Sbjct: 439 aatggatcatg---accgccgccgccacccattccttctttgagtgcatcctccccgtac 383
Query: 1414 tggtcatagatctctctcttttcagggtcgctgaggacctcataaccctgagctagctcc 1473
|| ||||| || ||||| || ||||| || || || ||||| || ||||||| || |||
Sbjct: 382 tgatcataaatgtctcttttctcaggatcactaagtacctcgtaggcctgagcaagttcc 323
Query: 1474 ttgaacttctcggggtcgccgcccttgtcggggtggttcttgatggcggccttgcggtag 1533
|| ||||| || || || || |||||||| || ||||| ||||| || ||||| | |||
Sbjct: 322 ttaaacttttctggatctccacccttgtccggatggtttttgatagcagcctttctgtaa 263
Query: 1534 gccttcttgaggtcatcctgtga 1556
|| ||||| | |||||||||||
Sbjct: 262 gctttcttcaattcatcctgtga 240
>gb|CO200960.1|CO200960 RTCNT2_2_E08.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_2_E08_A029 5', mRNA sequence
Length = 713
Score = 77.8 bits (39), Expect = 1e-012
Identities = 208/263 (79%), Gaps = 6/263 (2%)
Strand = Plus / Minus
Query: 1294 cccctactgctgccacctccaaaagggcttccaccaccaaagaatgactggaatatgtca 1353
||||| ||||| |||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 600 cccctgctgctaccacctccaaaaggatttccacca---aagaacgactggaatatatca 544
Query: 1354 aagggatcatgcatcccaccaccgcctcccattccctccttgagggcatcctcaccatat 1413
|| |||||||| || || ||||| |||||||| || ||||| |||||||| || ||
Sbjct: 543 aatggatcatg---accgccgccgccacccattccttctttgagtgcatcctccccgtac 487
Query: 1414 tggtcatagatctctctcttttcagggtcgctgaggacctcataaccctgagctagctcc 1473
|| ||||| || ||||| || ||||| || || || ||||| || ||||||| || |||
Sbjct: 486 tgatcataaatgtctcttttctcaggatcactaagtacctcgtaggcctgagcaagttcc 427
Query: 1474 ttgaacttctcggggtcgccgcccttgtcggggtggttcttgatggcggccttgcggtag 1533
|| ||||| || || || || |||||||| || ||||| ||||| || ||||| | |||
Sbjct: 426 ttaaacttttctggatctccacccttgtccggatggtttttgatagcagcctttctgtaa 367
Query: 1534 gccttcttgaggtcatcctgtga 1556
|| ||||| | |||||||||||
Sbjct: 366 gctttcttcaattcatcctgtga 344
>gb|CX715248.1|CX715248 RTPQ1_32_H07.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_32_H07_A032 5', mRNA sequence
Length = 708
Score = 77.8 bits (39), Expect = 1e-012
Identities = 208/263 (79%), Gaps = 6/263 (2%)
Strand = Plus / Minus
Query: 1294 cccctactgctgccacctccaaaagggcttccaccaccaaagaatgactggaatatgtca 1353
||||| ||||| |||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 475 cccctgctgctaccacctccaaaaggatttccacca---aagaacgactggaatatatca 419
Query: 1354 aagggatcatgcatcccaccaccgcctcccattccctccttgagggcatcctcaccatat 1413
|| |||||||| || || ||||| |||||||| || ||||| |||||||| || ||
Sbjct: 418 aatggatcatg---accgccgccgccacccattccttctttgagtgcatcctccccgtac 362
Query: 1414 tggtcatagatctctctcttttcagggtcgctgaggacctcataaccctgagctagctcc 1473
|| ||||| || ||||| || ||||| || || || ||||| || ||||||| || |||
Sbjct: 361 tgatcataaatgtctcttttctcaggatcactaagtacctcgtaggcctgagcaagttcc 302
Query: 1474 ttgaacttctcggggtcgccgcccttgtcggggtggttcttgatggcggccttgcggtag 1533
|| ||||| || || || || |||||||| || ||||| ||||| || ||||| | |||
Sbjct: 301 ttaaacttttctggatctccacccttgtccggatggtttttgatagcagcctttctgtaa 242
Query: 1534 gccttcttgaggtcatcctgtga 1556
|| ||||| | |||||||||||
Sbjct: 241 gctttcttcaattcatcctgtga 219
>gb|DR161623.1|DR161623 RTFE1_12_H10.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_12_H10_A029 5', mRNA sequence
Length = 570
Score = 73.8 bits (37), Expect = 2e-011
Identities = 203/257 (78%), Gaps = 6/257 (2%)
Strand = Plus / Minus
Query: 1300 ctgctgccacctccaaaagggcttccaccaccaaagaatgactggaatatgtcaaaggga 1359
||||| |||||||||||||| |||||||| ||||| ||||||||||| ||||| |||
Sbjct: 569 ctgctaccacctccaaaaggatttccacca---aagaacgactggaatatatcaaatgga 513
Query: 1360 tcatgcatcccaccaccgcctcccattccctccttgagggcatcctcaccatattggtca 1419
||||| || || ||||| |||||||| || ||||| |||||||| || || || |||
Sbjct: 512 tcatg---accgccgccgccacccattccttctttgagtgcatcctccccgtactgatca 456
Query: 1420 tagatctctctcttttcagggtcgctgaggacctcataaccctgagctagctccttgaac 1479
|| || ||||| || ||||| || || || ||||| || ||||||| || ||||| |||
Sbjct: 455 taaatgtctcttttctcaggatcactaagtacctcgtaggcctgagcaagttccttaaac 396
Query: 1480 ttctcggggtcgccgcccttgtcggggtggttcttgatggcggccttgcggtaggccttc 1539
|| || || || || |||||||| || ||||| ||||| || ||||| | ||| || |||
Sbjct: 395 ttttctggatctccacccttgtccggatggtttttgatagcagcctttctgtaagctttc 336
Query: 1540 ttgaggtcatcctgtga 1556
|| | |||||||||||
Sbjct: 335 ttcaattcatcctgtga 319
>gb|CO165319.1|CO165319 FLD1_53_F10.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_53_F10_A029 5', mRNA sequence
Length = 836
Score = 71.9 bits (36), Expect = 8e-011
Identities = 321/414 (77%), Gaps = 9/414 (2%)
Strand = Plus / Minus
Query: 1146 tgaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacag 1205
|||||| ||||||||||| || || || ||||| || ||||| || ||| | || || ||
Sbjct: 647 tgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgagatag 588
Query: 1206 agagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaac 1265
|| | |||||||||||| |||||||| | || |||| || ||||||| || |||||
Sbjct: 587 tgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggtgaac 528
Query: 1266 cacatcatctccccgccgttgccttctg---cccctactgctgccacctccaaaagggct 1322
||||| || || | || |||||||| | ||||| ||||| |||||||||||||| |
Sbjct: 527 aacatcttcgcctctcctttgccttcgggttcccctgctgctaccacctccaaaaggatt 468
Query: 1323 tccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcc 1382
||||||| ||||| ||||||||||| ||||| |||||||| || || ||||| ||
Sbjct: 467 tccacca---aagaacgactggaatatatcaaatggatcatg---accgccgccgccacc 414
Query: 1383 cattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtc 1442
|||||| || ||||| |||||||| || || | ||||| || ||||| || ||||| ||
Sbjct: 413 cattccttctttgagtgcatcctccccgtactcatcataaatgtctcttttctcaggatc 354
Query: 1443 gctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtc 1502
|| || ||||| || ||||||| || ||||| ||||| || || || || ||||||||
Sbjct: 353 actaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccacccttgtc 294
Query: 1503 ggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtga 1556
|| ||||| ||||| || ||||| | ||| || ||||| | |||||||||||
Sbjct: 293 cggatggtttttgatagcagcctttctgtaagctttcttcaattcatcctgtga 240
Score = 42.1 bits (21), Expect = 0.073
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 985 actttatcacccttgcactgtgggcatct 1013
||||| ||||||||||| |||||||||||
Sbjct: 808 actttttcacccttgcattgtgggcatct 780
>gb|DR682449.1|DR682449 EST1072524 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA990 3' end, mRNA sequence
Length = 791
Score = 71.9 bits (36), Expect = 8e-011
Identities = 321/414 (77%), Gaps = 9/414 (2%)
Strand = Plus / Minus
Query: 1146 tgaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacag 1205
|||||| ||||||||||| || || || ||||| || ||||| || ||| | || || ||
Sbjct: 456 tgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgagatag 397
Query: 1206 agagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaac 1265
|| | |||||||||||| |||||||| | || |||| || ||||||| || |||||
Sbjct: 396 tgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggtgaac 337
Query: 1266 cacatcatctccccgccgttgccttctg---cccctactgctgccacctccaaaagggct 1322
||||| || || | || |||||||| | ||||| ||||| |||||||||||||| |
Sbjct: 336 aacatcttcgcctctcctttgccttcgggttcccctgctgctaccacctccaaaaggatt 277
Query: 1323 tccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcc 1382
||||||| ||||| ||||||||||| ||||| |||||||| || || ||||| ||
Sbjct: 276 tccacca---aagaacgactggaatatatcaaatggatcatg---accgccgccgccacc 223
Query: 1383 cattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtc 1442
|||||| || ||||| |||||||| || || || ||||| || ||||| || ||||| ||
Sbjct: 222 cattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctcaggatc 163
Query: 1443 gctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtc 1502
|| || ||||| || ||||||| || |||| ||||| || || || || ||||||||
Sbjct: 162 actaagtacctcgtaggcctgagcaagttcctcaaacttttctggatctccacccttgtc 103
Query: 1503 ggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtga 1556
|| ||||| ||||| || ||||| | ||| || ||||| | |||||||||||
Sbjct: 102 cggatggtttttgatagcagcctttctgtaagctttcttcaattcatcctgtga 49
Score = 44.1 bits (22), Expect = 0.018
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 823 ccctttctcttgaacttgggatgctc 848
|||||||||||||| |||||||||||
Sbjct: 778 ccctttctcttgaatttgggatgctc 753
Score = 42.1 bits (21), Expect = 0.073
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 985 actttatcacccttgcactgtgggcatct 1013
||||| ||||||||||| |||||||||||
Sbjct: 617 actttttcacccttgcattgtgggcatct 589
>gb|BX249446.1|BX249446 BX249446 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP024B04, mRNA sequence
Length = 669
Score = 69.9 bits (35), Expect = 3e-010
Identities = 207/263 (78%), Gaps = 6/263 (2%)
Strand = Plus / Minus
Query: 1294 cccctactgctgccacctccaaaagggcttccaccaccaaagaatgactggaatatgtca 1353
||||| ||||| |||||||||||||| ||||||| ||||| ||||||||||| |||
Sbjct: 414 cccctgctgctaccacctccaaaaggatttccaccg---aagaacgactggaatatatca 358
Query: 1354 aagggatcatgcatcccaccaccgcctcccattccctccttgagggcatcctcaccatat 1413
|| |||||||| || || ||||| |||||||| || ||||| |||||||| || ||
Sbjct: 357 aatggatcatga---ccgccgccgccacccattccttctttgagtgcatcctccccgtac 301
Query: 1414 tggtcatagatctctctcttttcagggtcgctgaggacctcataaccctgagctagctcc 1473
|| ||||| || ||||| || ||||| || || || |||||||| ||||||| || |||
Sbjct: 300 tgatcataaatgtctcttttctcaggatcactaagtacctcataggcctgagcaagttcc 241
Query: 1474 ttgaacttctcggggtcgccgcccttgtcggggtggttcttgatggcggccttgcggtag 1533
|| ||||| || || || || ||||| || || ||||| ||||| || ||||| | |||
Sbjct: 240 ttaaacttttctggatctccacccttatccggatggtttttgatagcagcctttctgtaa 181
Query: 1534 gccttcttgaggtcatcctgtga 1556
|| ||||| | |||||||||||
Sbjct: 180 gctttcttcaattcatcctgtga 158
>gb|BX252596.1|BX252596 BX252596 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP067C06 similar to DNAJ PROTEIN, mRNA
sequence
Length = 659
Score = 69.9 bits (35), Expect = 3e-010
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 1219 gatgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccacatcatctccc 1278
||||| |||||||||| |||||||||||||||||||||||||| || ||||| || ||
Sbjct: 557 gatgttccattgtacaggtcctccagagaaaccttcagaggatgtacaacatcttcacct 498
Query: 1279 cgccgttgccttctgcccctactgctgccacctccaaaa 1317
|| |||||||| |||||| ||| ||||||||||||
Sbjct: 497 tgcttttgccttcggccccttgagctaccacctccaaaa 459
Score = 61.9 bits (31), Expect = 8e-008
Identities = 151/191 (79%)
Strand = Plus / Minus
Query: 1330 ccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcccattccc 1389
|||||||| |||| |||||||||||||||| ||| ||||||| |||||||| |||
Sbjct: 437 ccaaagaaagactcaaatatgtcaaagggattatgggaagcaccacctcctcccatcccc 378
Query: 1390 tccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtcgctgagg 1449
|| || |||||||| || ||||| || ||||| ||||| || ||||| || || || | |
Sbjct: 377 tctttcagggcatcttctccatactgatcatatatctcccttttttctggatcactcaag 318
Query: 1450 acctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtcggggtgg 1509
|| |||||| ||||||| | || ||||| || || || || || |||||||| |||||
Sbjct: 317 acttcataagcctgagccaattctttgaatttttctggatccccacccttgtcagggtga 258
Query: 1510 ttcttgatggc 1520
|| ||||||||
Sbjct: 257 tttttgatggc 247
>gb|CF390139.1|CF390139 RTDR2_12_E04.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_12_E04_A021 5', mRNA
sequence
Length = 674
Score = 69.9 bits (35), Expect = 3e-010
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 1219 gatgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccacatcatctccc 1278
||||| |||||||||| |||||||||||||||||||||||||| || ||||| || ||
Sbjct: 502 gatgttccattgtacaggtcctccagagaaaccttcagaggatgtacaacatcttcacct 443
Query: 1279 cgccgttgccttctgcccctactgctgccacctccaaaa 1317
|| |||||||| |||||| |||||| |||||||||
Sbjct: 442 tgcttttgccttcggccccttgagctgccgcctccaaaa 404
Score = 65.9 bits (33), Expect = 5e-009
Identities = 111/137 (81%)
Strand = Plus / Minus
Query: 1330 ccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcccattccc 1389
|||||||| |||| |||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 382 ccaaagaaagactcaaatatgtcaaagggattatgggaagcaccacctcctcccattccc 323
Query: 1390 tccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtcgctgagg 1449
|| || |||||||| || ||||| || ||||| ||||| || ||||| || || || | |
Sbjct: 322 tctttcagggcatcttctccatactgatcatatatctcccttttttctggatcactcaag 263
Query: 1450 acctcataaccctgagc 1466
|| |||||| |||||||
Sbjct: 262 acttcataagcctgagc 246
>gb|CF473550.1|CF473550 RTWW2_3_H01.g1_A021 Well-watered loblolly pine roots WW2 Pinus taeda
cDNA clone RTWW2_3_H01_A021 5', mRNA sequence
Length = 702
Score = 69.9 bits (35), Expect = 3e-010
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 1219 gatgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccacatcatctccc 1278
||||| |||||||||| |||||||||||||||||||||||||| || ||||| || ||
Sbjct: 532 gatgttccattgtacaggtcctccagagaaaccttcagaggatgtacaacatcttcacct 473
Query: 1279 cgccgttgccttctgcccctactgctgccacctccaaaa 1317
|| |||||||| |||||| |||||| |||||||||
Sbjct: 472 tgcttttgccttcggccccttgagctgccgcctccaaaa 434
Score = 65.9 bits (33), Expect = 5e-009
Identities = 111/137 (81%)
Strand = Plus / Minus
Query: 1330 ccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcccattccc 1389
|||||||| |||| |||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 412 ccaaagaaagactcaaatatgtcaaagggattatgggaagcaccacctcctcccattccc 353
Query: 1390 tccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtcgctgagg 1449
|| || |||||||| || ||||| || ||||| ||||| || ||||| || || || | |
Sbjct: 352 tctttcagggcatcttctccatactgatcatatatctcccttttttctggatcactcaag 293
Query: 1450 acctcataaccctgagc 1466
|| |||||| |||||||
Sbjct: 292 acttcataagcctgagc 276
>gb|CF669350.1|CF669350 RTCNT1_42_F05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_42_F05_A029 5', mRNA sequence
Length = 656
Score = 69.9 bits (35), Expect = 3e-010
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 1219 gatgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccacatcatctccc 1278
||||| |||||||||| |||||||||||||||||||||||||| || ||||| || ||
Sbjct: 567 gatgttccattgtacaggtcctccagagaaaccttcagaggatgtacaacatcttcacct 508
Query: 1279 cgccgttgccttctgcccctactgctgccacctccaaaa 1317
|| |||||||| |||||| |||||| |||||||||
Sbjct: 507 tgcttttgccttcggccccttgagctgccgcctccaaaa 469
Score = 65.9 bits (33), Expect = 5e-009
Identities = 111/137 (81%)
Strand = Plus / Minus
Query: 1330 ccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcccattccc 1389
|||||||| |||| |||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 447 ccaaagaaagactcaaatatgtcaaagggattatgggaagcaccacctcctcccattccc 388
Query: 1390 tccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtcgctgagg 1449
|| || |||||||| || ||||| || ||||| ||||| || ||||| || || || | |
Sbjct: 387 tctttcagggcatcttctccatactgatcatatatctcccttttttctggatcactcaag 328
Query: 1450 acctcataaccctgagc 1466
|| |||||| |||||||
Sbjct: 327 acttcataagcctgagc 311
>gb|CO176666.1|CO176666 NDL1_63_A09.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_63_A09_A029 5', mRNA sequence
Length = 787
Score = 69.9 bits (35), Expect = 3e-010
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 1219 gatgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccacatcatctccc 1278
||||| |||||||||| |||||||||||||||||||||||||| || ||||| || ||
Sbjct: 176 gatgttccattgtacaggtcctccagagaaaccttcagaggatgtacaacatcttcacct 117
Query: 1279 cgccgttgccttctgcccctactgctgccacctccaaaa 1317
|| |||||||| |||||| |||||| |||||||||
Sbjct: 116 tgcttttgccttcggccccttgagctgccgcctccaaaa 78
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 877 ccagtgacagtgtcaggcgcttcatcagcttcacc 911
||||| |||||||| ||||||||||||||||||||
Sbjct: 518 ccagttacagtgtccggcgcttcatcagcttcacc 484
>gb|CO364076.1|CO364076 RTK1_13_C01.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_13_C01_A029 5', mRNA sequence
Length = 902
Score = 69.9 bits (35), Expect = 3e-010
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 1219 gatgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccacatcatctccc 1278
||||| |||||||||| |||||||||||||||||||||||||| || ||||| || ||
Sbjct: 294 gatgttccattgtacaggtcctccagagaaaccttcagaggatgtacaacatcttcacct 235
Query: 1279 cgccgttgccttctgcccctactgctgccacctccaaaa 1317
|| |||||||| |||||| |||||| |||||||||
Sbjct: 234 tgcttttgccttcggccccttgagctgccgcctccaaaa 196
Score = 61.9 bits (31), Expect = 8e-008
Identities = 88/107 (82%)
Strand = Plus / Minus
Query: 1330 ccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcccattccc 1389
|||||||| |||| |||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 174 ccaaagaaagactcaaatatgtcaaagggattatgggaagcaccacctcctcccattccc 115
Query: 1390 tccttgagggcatcctcaccatattggtcatagatctctctcttttc 1436
|| || |||||||| || ||||| || ||||| ||||| || |||||
Sbjct: 114 tctttcagggcatcttctccatactgatcatatatctcccttttttc 68
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 877 ccagtgacagtgtcaggcgcttcatcagcttcacc 911
||||| |||||||| ||||||||||||||||||||
Sbjct: 636 ccagttacagtgtccggcgcttcatcagcttcacc 602
>gb|CO368425.1|CO368425 RTK1_40_C07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_40_C07_A029 5', mRNA sequence
Length = 813
Score = 69.9 bits (35), Expect = 3e-010
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 1219 gatgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccacatcatctccc 1278
||||| |||||||||| |||||||||||||||||||||||||| || ||||| || ||
Sbjct: 544 gatgttccattgtacaggtcctccagagaaaccttcagaggatgtacaacatcttcacct 485
Query: 1279 cgccgttgccttctgcccctactgctgccacctccaaaa 1317
|| |||||||| |||||| |||||| |||||||||
Sbjct: 484 tgcttttgccttcggccccttgagctgccgcctccaaaa 446
Score = 65.9 bits (33), Expect = 5e-009
Identities = 111/137 (81%)
Strand = Plus / Minus
Query: 1330 ccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcccattccc 1389
|||||||| |||| |||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 424 ccaaagaaagactcaaatatgtcaaagggattatgggaagcaccacctcctcccattccc 365
Query: 1390 tccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtcgctgagg 1449
|| || |||||||| || ||||| || ||||| ||||| || ||||| || || || | |
Sbjct: 364 tctttcagggcatcttctccatactgatcatatatctcccttttttctggatcactcaag 305
Query: 1450 acctcataaccctgagc 1466
|| |||||| |||||||
Sbjct: 304 acttcataagcctgagc 288
>gb|CV033965.1|CV033965 RTNACL1_37_E07.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_37_E07_A029 5', mRNA sequence
Length = 702
Score = 69.9 bits (35), Expect = 3e-010
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 1219 gatgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccacatcatctccc 1278
||||| |||||||||| |||||||||||||||||||||||||| || ||||| || ||
Sbjct: 208 gatgttccattgtacaggtcctccagagaaaccttcagaggatgtacaacatcttcacct 149
Query: 1279 cgccgttgccttctgcccctactgctgccacctccaaaa 1317
|| |||||||| |||||| |||||| |||||||||
Sbjct: 148 tgcttttgccttcggccccttgagctgccgcctccaaaa 110
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 877 ccagtgacagtgtcaggcgcttcatcagcttcacc 911
||||| |||||||| ||||||||||||||||||||
Sbjct: 550 ccagttacagtgtccggcgcttcatcagcttcacc 516
Score = 54.0 bits (27), Expect = 2e-005
Identities = 69/83 (83%)
Strand = Plus / Minus
Query: 1330 ccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcccattccc 1389
|||||||| |||| |||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 88 ccaaagaaagactcaaatatgtcaaagggattatgggaagcaccacctcctcccattccc 29
Query: 1390 tccttgagggcatcctcaccata 1412
|| || |||||||| || |||||
Sbjct: 28 tctttcagggcatcttctccata 6
>gb|CV034654.1|CV034654 RTNACL1_10_E02.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_10_E02_A029 5', mRNA sequence
Length = 726
Score = 69.9 bits (35), Expect = 3e-010
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 1219 gatgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccacatcatctccc 1278
||||| |||||||||| |||||||||||||||||||||||||| || ||||| || ||
Sbjct: 117 gatgttccattgtacaggtcctccagagaaaccttcagaggatgtacaacatcttcacct 58
Query: 1279 cgccgttgccttctgcccctactgctgccacctccaaaa 1317
|| |||||||| |||||| |||||| |||||||||
Sbjct: 57 tgcttttgccttcggccccttgagctgccgcctccaaaa 19
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 877 ccagtgacagtgtcaggcgcttcatcagcttcacc 911
||||| |||||||| ||||||||||||||||||||
Sbjct: 459 ccagttacagtgtccggcgcttcatcagcttcacc 425
>gb|CX646771.1|CX646771 COLD1_11_A08.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_11_A08_A029 5', mRNA sequence
Length = 866
Score = 69.9 bits (35), Expect = 3e-010
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 1219 gatgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccacatcatctccc 1278
||||| |||||||||| |||||||||||||||||||||||||| || ||||| || ||
Sbjct: 191 gatgttccattgtacaggtcctccagagaaaccttcagaggatgtacaacatcttcacct 132
Query: 1279 cgccgttgccttctgcccctactgctgccacctccaaaa 1317
|| |||||||| |||||| |||||| |||||||||
Sbjct: 131 tgcttttgccttcggccccttgagctgccgcctccaaaa 93
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 877 ccagtgacagtgtcaggcgcttcatcagcttcacc 911
||||| |||||||| ||||||||||||||||||||
Sbjct: 533 ccagttacagtgtccggcgcttcatcagcttcacc 499
Score = 48.1 bits (24), Expect = 0.001
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 1330 ccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcccattccc 1389
|||||||| |||| |||||||||||||||| ||| | | |||||| ||||||||||||
Sbjct: 71 ccaaagaaagactcaaatatgtcaaagggattatgaaaac-accacctcctcccattccc 13
Query: 1390 tccttgagggca 1401
|| || ||||||
Sbjct: 12 tctttcagggca 1
>gb|CX651299.1|CX651299 COLD1_51_A08.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_51_A08_A029 5', mRNA sequence
Length = 516
Score = 69.9 bits (35), Expect = 3e-010
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 1219 gatgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccacatcatctccc 1278
||||| |||||||||| |||||||||||||||||||||||||| || ||||| || ||
Sbjct: 514 gatgttccattgtacaggtcctccagagaaaccttcagaggatgtacaacatcttcacct 455
Query: 1279 cgccgttgccttctgcccctactgctgccacctccaaaa 1317
|| |||||||| |||||| |||||| |||||||||
Sbjct: 454 tgcttttgccttcggccccttgagctgccgcctccaaaa 416
Score = 65.9 bits (33), Expect = 5e-009
Identities = 111/137 (81%)
Strand = Plus / Minus
Query: 1330 ccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcccattccc 1389
|||||||| |||| |||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 394 ccaaagaaagactcaaatatgtcaaagggattatgggaagcaccacctcctcccattccc 335
Query: 1390 tccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtcgctgagg 1449
|| || |||||||| || ||||| || ||||| ||||| || ||||| || || || | |
Sbjct: 334 tctttcagggcatcttctccatactgatcatatatctcccttttttctggatcactcaag 275
Query: 1450 acctcataaccctgagc 1466
|| |||||| |||||||
Sbjct: 274 acttcataagcctgagc 258
>gb|DR060009.1|DR060009 RTNIT1_25_D07.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_25_D07_A029 3', mRNA sequence
Length = 802
Score = 69.9 bits (35), Expect = 3e-010
Identities = 83/99 (83%)
Strand = Plus / Plus
Query: 1219 gatgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccacatcatctccc 1278
||||| |||||||||| |||||||||||||||||||||||||| || ||||| || ||
Sbjct: 270 gatgttccattgtacaggtcctccagagaaaccttcagaggatgtacaacatcttcacct 329
Query: 1279 cgccgttgccttctgcccctactgctgccacctccaaaa 1317
|| |||||||| |||||| |||||| |||||||||
Sbjct: 330 tgcttttgccttcggccccttgagctgccgcctccaaaa 368
Score = 65.9 bits (33), Expect = 5e-009
Identities = 111/137 (81%)
Strand = Plus / Plus
Query: 1330 ccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcccattccc 1389
|||||||| |||| |||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 390 ccaaagaaagactcaaatatgtcaaagggattatgggaagcaccacctcctcccattccc 449
Query: 1390 tccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtcgctgagg 1449
|| || |||||||| || ||||| || ||||| ||||| || ||||| || || || | |
Sbjct: 450 tctttcagggcatcttctccatactgatcatatatctcccttttttctggatcactcaag 509
Query: 1450 acctcataaccctgagc 1466
|| |||||| |||||||
Sbjct: 510 acttcataagcctgagc 526
>gb|DR089543.1|DR089543 RTAL1_9_H03.b1_A029 Roots plus added aluminum Pinus taeda cDNA clone
RTAL1_9_H03_A029 3', mRNA sequence
Length = 768
Score = 69.9 bits (35), Expect = 3e-010
Identities = 83/99 (83%)
Strand = Plus / Plus
Query: 1219 gatgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccacatcatctccc 1278
||||| |||||||||| |||||||||||||||||||||||||| || ||||| || ||
Sbjct: 220 gatgttccattgtacaggtcctccagagaaaccttcagaggatgtacaacatcttcacct 279
Query: 1279 cgccgttgccttctgcccctactgctgccacctccaaaa 1317
|| |||||||| |||||| |||||| |||||||||
Sbjct: 280 tgcttttgccttcggccccttgagctgccgcctccaaaa 318
Score = 65.9 bits (33), Expect = 5e-009
Identities = 111/137 (81%)
Strand = Plus / Plus
Query: 1330 ccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcccattccc 1389
|||||||| |||| |||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 340 ccaaagaaagactcaaatatgtcaaagggattatgggaagcaccacctcctcccattccc 399
Query: 1390 tccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtcgctgagg 1449
|| || |||||||| || ||||| || ||||| ||||| || ||||| || || || | |
Sbjct: 400 tctttcagggcatcttctccatactgatcatatatctcccttttttctggatcactcaag 459
Query: 1450 acctcataaccctgagc 1466
|| |||||| |||||||
Sbjct: 460 acttcataagcctgagc 476
>gb|DR117184.1|DR117184 RTMG1_5_G03.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_5_G03_A029 3', mRNA sequence
Length = 896
Score = 69.9 bits (35), Expect = 3e-010
Identities = 322/414 (77%), Gaps = 9/414 (2%)
Strand = Plus / Plus
Query: 1146 tgaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacag 1205
|||||| ||||||||||| || || || ||||| || ||||| || ||| | || || ||
Sbjct: 314 tgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgagatag 373
Query: 1206 agagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaac 1265
|| | |||||||||||| |||||||| | || |||| || ||||||| || |||||
Sbjct: 374 tgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggtgaac 433
Query: 1266 cacatcatctccccgccgttgccttctg---cccctactgctgccacctccaaaagggct 1322
||||| || || | || |||||||| | ||||| ||||| |||||||||||||| |
Sbjct: 434 aacatcttcgcctctcctttgccttcgggttcccctgctgctaccacctccaaaagga-t 492
Query: 1323 tccaccaccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcc 1382
||| |||||||||| ||||||||||| ||||| ||||| || || || ||||| ||
Sbjct: 493 tcc--caccaaagaacgactggaatatatcaaatggatcgtga---ccgccgccgccacc 547
Query: 1383 cattccctccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtc 1442
|||||| || ||||| |||||||| || || || ||||| || ||||| || ||||| ||
Sbjct: 548 cattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctcaggatc 607
Query: 1443 gctgaggacctcataaccctgagctagctccttgaacttctcggggtcgccgcccttgtc 1502
|| || ||||| || ||||||| || ||||| ||||| || || || || ||||||||
Sbjct: 608 actaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccacccttgtc 667
Query: 1503 ggggtggttcttgatggcggccttgcggtaggccttcttgaggtcatcctgtga 1556
|| ||||| ||||| || ||||| | ||| || ||||| | |||||||||||
Sbjct: 668 cggatggtttttgatagcagcctttctgtaagctttcttcaattcatcctgtga 721
Score = 42.1 bits (21), Expect = 0.073
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 985 actttatcacccttgcactgtgggcatct 1013
||||| ||||||||||| |||||||||||
Sbjct: 153 actttttcacccttgcattgtgggcatct 181
>gb|DR117389.1|DR117389 RTMG1_6_E04.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_6_E04_A029 5', mRNA sequence
Length = 848
Score = 69.9 bits (35), Expect = 3e-010
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 1219 gatgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccacatcatctccc 1278
||||| |||||||||| |||||||||||||||||||||||||| || ||||| || ||
Sbjct: 829 gatgttccattgtacaggtcctccagagaaaccttcagaggatgtacaacatcttcacct 770
Query: 1279 cgccgttgccttctgcccctactgctgccacctccaaaa 1317
|| |||||||| |||||| |||||| |||||||||
Sbjct: 769 tgcttttgccttcggccccttgagctgccgcctccaaaa 731
Score = 44.1 bits (22), Expect = 0.018
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 1330 ccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcccattccc 1389
|||||||| |||| |||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 709 ccaaagaaagactcaaatatgtcaaagggattatgggaagcaccacctcctcccattccc 650
Query: 1390 tc 1391
||
Sbjct: 649 tc 648
>gb|DR163547.1|DR163547 RTFE1_43_C01.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_43_C01_A029 5', mRNA sequence
Length = 821
Score = 69.9 bits (35), Expect = 3e-010
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 1219 gatgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccacatcatctccc 1278
||||| |||||||||| |||||||||||||||||||||||||| || ||||| || ||
Sbjct: 531 gatgttccattgtacaggtcctccagagaaaccttcagaggatgtacaacatcttcacct 472
Query: 1279 cgccgttgccttctgcccctactgctgccacctccaaaa 1317
|| |||||||| |||||| |||||| |||||||||
Sbjct: 471 tgcttttgccttcggccccttgagctgccgcctccaaaa 433
Score = 65.9 bits (33), Expect = 5e-009
Identities = 111/137 (81%)
Strand = Plus / Minus
Query: 1330 ccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcccattccc 1389
|||||||| |||| |||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 411 ccaaagaaagactcaaatatgtcaaagggattatgggaagcaccacctcctcccattccc 352
Query: 1390 tccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtcgctgagg 1449
|| || |||||||| || ||||| || ||||| ||||| || ||||| || || || | |
Sbjct: 351 tctttcagggcatcttctccatactgatcatatatctcccttttttctggatcactcaag 292
Query: 1450 acctcataaccctgagc 1466
|| |||||| |||||||
Sbjct: 291 acttcataagcctgagc 275
>gb|DR182342.1|DR182342 RTMNUT1_44_A01.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_44_A01_A029 5', mRNA sequence
Length = 695
Score = 69.9 bits (35), Expect = 3e-010
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 1219 gatgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccacatcatctccc 1278
||||| |||||||||| |||||||||||||||||||||||||| || ||||| || ||
Sbjct: 522 gatgttccattgtacaggtcctccagagaaaccttcagaggatgtacaacatcttcacct 463
Query: 1279 cgccgttgccttctgcccctactgctgccacctccaaaa 1317
|| |||||||| |||||| |||||| |||||||||
Sbjct: 462 tgcttttgccttcggccccttgagctgccgcctccaaaa 424
Score = 65.9 bits (33), Expect = 5e-009
Identities = 111/137 (81%)
Strand = Plus / Minus
Query: 1330 ccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcccattccc 1389
|||||||| |||| |||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 402 ccaaagaaagactcaaatatgtcaaagggattatgggaagcaccacctcctcccattccc 343
Query: 1390 tccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtcgctgagg 1449
|| || |||||||| || ||||| || ||||| ||||| || ||||| || || || | |
Sbjct: 342 tctttcagggcatcttctccatactgatcatatatctcccttttttctggatcactcaag 283
Query: 1450 acctcataaccctgagc 1466
|| |||||| |||||||
Sbjct: 282 acttcataagcctgagc 266
>gb|DR387999.1|DR387999 RTHG1_25_C04.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_25_C04_A029 5', mRNA sequence
Length = 734
Score = 69.9 bits (35), Expect = 3e-010
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 1219 gatgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccacatcatctccc 1278
||||| |||||||||| |||||||||||||||||||||||||| || ||||| || ||
Sbjct: 243 gatgttccattgtacaggtcctccagagaaaccttcagaggatgtacaacatcttcacct 184
Query: 1279 cgccgttgccttctgcccctactgctgccacctccaaaa 1317
|| |||||||| |||||| |||||| |||||||||
Sbjct: 183 tgcttttgccttcggccccttgagctgccgcctccaaaa 145
Score = 61.9 bits (31), Expect = 8e-008
Identities = 88/107 (82%)
Strand = Plus / Minus
Query: 1330 ccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcccattccc 1389
|||||||| |||| |||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 123 ccaaagaaagactcaaatatgtcaaagggattatgggaagcaccacctcctcccattccc 64
Query: 1390 tccttgagggcatcctcaccatattggtcatagatctctctcttttc 1436
|| || |||||||| || ||||| || ||||| ||||| || |||||
Sbjct: 63 tctttcagggcatcttctccatactgatcatatatctcccttttttc 17
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 877 ccagtgacagtgtcaggcgcttcatcagcttcacc 911
||||| |||||||| ||||||||||||||||||||
Sbjct: 585 ccagttacagtgtccggcgcttcatcagcttcacc 551
>gb|AA556894.1|AA556894 736 Loblolly pine C Pinus taeda cDNA clone 7C12B, mRNA sequence
Length = 605
Score = 67.9 bits (34), Expect = 1e-009
Identities = 206/263 (78%), Gaps = 6/263 (2%)
Strand = Plus / Minus
Query: 1294 cccctactgctgccacctccaaaagggcttccaccaccaaagaatgactggaatatgtca 1353
||||| ||||| |||||||||||||| |||||||| ||||| ||||||||||| |||
Sbjct: 434 cccctgctgctaccacctccaaaaggatttccacca---aagaacgactggaatatatca 378
Query: 1354 aagggatcatgcatcccaccaccgcctcccattccctccttgagggcatcctcaccatat 1413
|| |||||||| || || ||||| ||||||| || ||||| |||||||| || ||
Sbjct: 377 aatggatcatg---accgccgccgccacccattcnttctttgagtgcatcctccccgtac 321
Query: 1414 tggtcatagatctctctcttttcagggtcgctgaggacctcataaccctgagctagctcc 1473
|| ||||| || ||||| || ||||| || || || || || || ||||||| || |||
Sbjct: 320 tgatcataaatgtctcttttntcaggatcactaagtacntcgtaggcctgagcaagttcc 261
Query: 1474 ttgaacttctcggggtcgccgcccttgtcggggtggttcttgatggcggccttgcggtag 1533
|| ||||| || || || || |||||||| || ||||| ||||| || ||||| | |||
Sbjct: 260 ttaaacttttctggatctccacccttgtccggatggtttttgatagcagcctttctgtaa 201
Query: 1534 gccttcttgaggtcatcctgtga 1556
|| ||||| | |||||||||||
Sbjct: 200 gctttcttcaattcatcctgtga 178
>gb|DR047440.1|DR047440 RTBOR1_1_C05.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_1_C05_A029 3', mRNA sequence
Length = 793
Score = 67.9 bits (34), Expect = 1e-009
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 1219 gatgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccacatcatctccc 1278
||||| |||||||||| |||||||||||||||||||||||||| || ||||| || ||
Sbjct: 696 gatgttccattgtacaggtcctccagagaaaccttcagaggatgtacaacatcttcacct 755
Query: 1279 cgccgttgccttctgcccctactgctgccacctccaaa 1316
|| |||||||| |||||| |||||| ||||||||
Sbjct: 756 tgcttttgccttcggccccttgagctgccgcctccaaa 793
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 877 ccagtgacagtgtcaggcgcttcatcagcttcacc 911
||||| |||||||| ||||||||||||||||||||
Sbjct: 354 ccagttacagtgtccggcgcttcatcagcttcacc 388
>gb|BE123609.1|BE123609 NXNV_146_C11_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV_146_C11 5' similar to Arabidopsis thaliana sequence
At5g22060 DNAJ PROTEIN HOMOLOG ATJ see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 306
Score = 65.9 bits (33), Expect = 5e-009
Identities = 111/137 (81%)
Strand = Plus / Minus
Query: 1330 ccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcccattccc 1389
|||||||| |||| |||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 220 ccaaagaaagactcaaatatgtcaaagggattatgggaagcaccacctcctcccattccc 161
Query: 1390 tccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtcgctgagg 1449
|| || |||||||| || ||||| || ||||| ||||| || ||||| || || || | |
Sbjct: 160 tctttcagggcatcttctccatactgatcatatatctcccttttttctggatcactcaag 101
Query: 1450 acctcataaccctgagc 1466
|| |||||| |||||||
Sbjct: 100 acttcataagcctgagc 84
>gb|CF479400.1|CF479400 RTWW3_23_B10.g1_A022 Well-watered loblolly pine roots WW3 Pinus taeda
cDNA clone RTWW3_23_B10_A022 5', mRNA sequence
Length = 775
Score = 65.9 bits (33), Expect = 5e-009
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 1219 gatgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccacatc 1271
||||| |||||||||| |||||||||||||||||||||||||| || |||||
Sbjct: 101 gatgttccattgtacaggtcctccagagaaaccttcagaggatgtacaacatc 49
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 877 ccagtgacagtgtcaggcgcttcatcagcttcacc 911
||||| |||||||| ||||||||||||||||||||
Sbjct: 443 ccagttacagtgtccggcgcttcatcagcttcacc 409
>gb|CV033295.1|CV033295 RTNACL1_33_D06.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_33_D06_A029 5', mRNA sequence
Length = 600
Score = 65.9 bits (33), Expect = 5e-009
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 1219 gatgtgccattgtacaaatcctccagagaaaccttcagaggatgaaccacatc 1271
||||| |||||||||| |||||||||||||||||||||||||| || |||||
Sbjct: 571 gatgttccattgtacaggtcctccagagaaaccttcagaggatgtacaacatc 519
Score = 65.9 bits (33), Expect = 5e-009
Identities = 111/137 (81%)
Strand = Plus / Minus
Query: 1330 ccaaagaatgactggaatatgtcaaagggatcatgcatcccaccaccgcctcccattccc 1389
|||||||| |||| |||||||||||||||| ||| ||||||| ||||||||||||
Sbjct: 451 ccaaagaaagactcaaatatgtcaaagggattatgggaagcaccacctcctcccattccc 392
Query: 1390 tccttgagggcatcctcaccatattggtcatagatctctctcttttcagggtcgctgagg 1449
|| || |||||||| || ||||| || ||||| ||||| || ||||| || || || | |
Sbjct: 391 tctttcagggcatcttctccatactgatcatatatctcccttttttctggatcactcaag 332
Query: 1450 acctcataaccctgagc 1466
|| |||||| |||||||
Sbjct: 331 acttcataagcctgagc 315
>gb|DN633740.1|DN633740 EST984556 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTADB22, mRNA sequence
Length = 781
Score = 63.9 bits (32), Expect = 2e-008
Identities = 104/128 (81%)
Strand = Plus / Minus
Query: 823 ccctttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtg 882
|||||||||||||| |||||||||||||| || || | ||||| | || || |||||
Sbjct: 586 ccctttctcttgaatttgggatgctccttttgttgaaccacaaatacaatgtcaccagta 527
Query: 883 acagtgtcaggcgcttcatcagcttcaccagggaatgtgatcttctgcccattctgcatg 942
|| ||||||||||||||||| ||||| || ||| |||||| |||| ||||| |||||
Sbjct: 526 actgtgtcaggcgcttcatctgcttccccttcgaaagtgatcctctgaccattttgcatt 467
Query: 943 cctttctc 950
|| |||||
Sbjct: 466 cccttctc 459
Score = 60.0 bits (30), Expect = 3e-007
Identities = 175/222 (78%), Gaps = 6/222 (2%)
Strand = Plus / Minus
Query: 1146 tgaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacag 1205
|||||| ||||||||||| || || || ||||| || ||||| || ||| | || || ||
Sbjct: 263 tgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgagatag 204
Query: 1206 agagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaac 1265
|| | |||||||||||| |||||||| | || |||| || ||||||| || |||||
Sbjct: 203 tgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggtgaac 144
Query: 1266 cacatcatctccccgccgttgccttctg---cccctactgctgccacctccaaaagggct 1322
||||| || || | || |||||||| | ||||| ||||| |||||||||||||| |
Sbjct: 143 aacatcttcgcctctcctttgccttcgggttcccctgctgctaccacctccaaaaggatt 84
Query: 1323 tccaccaccaaagaatgactggaatatgtcaaagggatcatg 1364
||||||| ||||| ||||||||||| ||||| ||||||||
Sbjct: 83 tccacca---aagaacgactggaatatatcaaatggatcatg 45
Score = 42.1 bits (21), Expect = 0.073
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 985 actttatcacccttgcactgtgggcatct 1013
||||| ||||||||||| |||||||||||
Sbjct: 424 actttttcacccttgcattgtgggcatct 396
>gb|DN633945.1|DN633945 EST984761 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTADE53, mRNA sequence
Length = 767
Score = 63.9 bits (32), Expect = 2e-008
Identities = 104/128 (81%)
Strand = Plus / Minus
Query: 823 ccctttctcttgaacttgggatgctccttctgctggagaacaaagatgatatctccagtg 882
|||||||||||||| |||||||||||||| || || | ||||| | || || |||||
Sbjct: 586 ccctttctcttgaatttgggatgctccttttgttgaaccacaaatacaatgtcaccagta 527
Query: 883 acagtgtcaggcgcttcatcagcttcaccagggaatgtgatcttctgcccattctgcatg 942
|| ||||| ||||||||||| ||||| || ||| |||||| |||| |||||||||||
Sbjct: 526 actgtgtcgggcgcttcatctgcttccccttcgaaagtgatcctctgaccattctgcatt 467
Query: 943 cctttctc 950
|| |||||
Sbjct: 466 cccttctc 459
Score = 60.0 bits (30), Expect = 3e-007
Identities = 175/222 (78%), Gaps = 6/222 (2%)
Strand = Plus / Minus
Query: 1146 tgaagctccagactttgaacccttaccattgcacttggagcagaggacactgcgggacag 1205
|||||| ||||||||||| || || || ||||| || ||||| || ||| | || || ||
Sbjct: 263 tgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgagatag 204
Query: 1206 agagagcttctttgatgtgccattgtacaaatcctccagagaaaccttcagaggatgaac 1265
|| | |||||||||||| |||||||| | || |||| || ||||||| || |||||
Sbjct: 203 tgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggtgaac 144
Query: 1266 cacatcatctccccgccgttgccttctg---cccctactgctgccacctccaaaagggct 1322
||||| || || | || |||||||| | ||||| ||||| |||||||||||||| |
Sbjct: 143 aacatcttcgcctctcctttgccttcgggttcccctgctgctaccacctccaaaaggatt 84
Query: 1323 tccaccaccaaagaatgactggaatatgtcaaagggatcatg 1364
||||||| ||||| ||||||||||| ||||| ||||||||
Sbjct: 83 tccacca---aagaacgactggaatatatcaaatggatcatg 45
Score = 42.1 bits (21), Expect = 0.073
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 985 actttatcacccttgcactgtgggcatct 1013
||||| ||||||||||| |||||||||||
Sbjct: 424 actttttcacccttgcattgtgggcatct 396
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 212,104
Number of Sequences: 355925
Number of extensions: 212104
Number of successful extensions: 67703
Number of sequences better than 0.5: 227
Number of HSP's better than 0.5 without gapping: 226
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 66598
Number of HSP's gapped (non-prelim): 896
length of query: 1681
length of database: 217,277,237
effective HSP length: 20
effective length of query: 1661
effective length of database: 210,158,737
effective search space: 349073662157
effective search space used: 349073662157
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)