BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2192958.2.2
(1723 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF389500.1|CF389500 RTDR2_7_F04.g1_A021 Loblolly pine ro... 82 9e-014
gb|DN633740.1|DN633740 EST984556 Subtracted pine embryo lib... 82 9e-014
gb|AW064596.1|AW064596 ST33D09 Pine TriplEx shoot tip libra... 78 1e-012
gb|BI397729.1|BI397729 NXPV_104_F04_F NXPV (Nsf Xylem Plani... 78 1e-012
gb|BE123609.1|BE123609 NXNV_146_C11_F Nsf Xylem Normal wood... 76 5e-012
gb|CF390139.1|CF390139 RTDR2_12_E04.g1_A021 Loblolly pine r... 76 5e-012
gb|CF473550.1|CF473550 RTWW2_3_H01.g1_A021 Well-watered lob... 76 5e-012
gb|CF669350.1|CF669350 RTCNT1_42_F05.g1_A029 Root control P... 76 5e-012
gb|CO364076.1|CO364076 RTK1_13_C01.g1_A029 Roots minus pota... 76 5e-012
gb|CO368425.1|CO368425 RTK1_40_C07.g1_A029 Roots minus pota... 76 5e-012
gb|CV033295.1|CV033295 RTNACL1_33_D06.g1_A029 Roots plus ad... 76 5e-012
gb|CX651299.1|CX651299 COLD1_51_A08.g1_A029 Root cold Pinus... 76 5e-012
gb|DR060009.1|DR060009 RTNIT1_25_D07.b1_A029 Roots minus ni... 76 5e-012
gb|DR089543.1|DR089543 RTAL1_9_H03.b1_A029 Roots plus added... 76 5e-012
gb|DR163547.1|DR163547 RTFE1_43_C01.g1_A029 Roots minus iro... 76 5e-012
gb|DR182342.1|DR182342 RTMNUT1_44_A01.g1_A029 Roots minus m... 76 5e-012
gb|AW754622.1|AW754622 PC04D07 Pine TriplEx pollen cone lib... 74 2e-011
gb|BX249446.1|BX249446 BX249446 Pinus pinaster differenciat... 74 2e-011
gb|BF186264.1|BF186264 NXCI_135_C06_F NXCI (Nsf Xylem Compr... 74 2e-011
gb|BG318920.1|BG318920 NXPV_021_E01_F NXPV (Nsf Xylem Plani... 74 2e-011
gb|BG318962.1|BG318962 NXPV_021_H11_F NXPV (Nsf Xylem Plani... 74 2e-011
gb|BI643932.1|BI643932 NXPV_129_E11_F NXPV (Nsf Xylem Plani... 74 2e-011
gb|BM157616.1|BM157616 NXLV_023_C12_F NXLV (Nsf Xylem Late ... 74 2e-011
gb|BQ290662.1|BQ290662 NXRV048_A07_F NXRV (Nsf Xylem Root w... 74 2e-011
gb|BQ290752.1|BQ290752 NXRV049_C01_F NXRV (Nsf Xylem Root w... 74 2e-011
gb|BQ696007.1|BQ696007 NXPV_035_D01_F NXPV (Nsf Xylem Plani... 74 2e-011
gb|BQ696579.1|BQ696579 NXPV_042_H06_F NXPV (Nsf Xylem Plani... 74 2e-011
gb|BQ696893.1|BQ696893 NXPV_046_F01_F NXPV (Nsf Xylem Plani... 74 2e-011
gb|BQ697630.1|BQ697630 NXPV_059_A01_F NXPV (Nsf Xylem Plani... 74 2e-011
gb|BQ697854.1|BQ697854 NXPV_061_F10_F NXPV (Nsf Xylem Plani... 74 2e-011
gb|BQ698557.1|BQ698557 NXPV_071_D05_F NXPV (Nsf Xylem Plani... 74 2e-011
gb|BQ702053.1|BQ702053 NXSI_123_G11_F NXSI (Nsf Xylem Side ... 74 2e-011
gb|CF389385.1|CF389385 RTDR2_7_F04.b1_A021 Loblolly pine ro... 74 2e-011
gb|CF391391.1|CF391391 RTDR3_1_C05.g1_A022 Loblolly pine ro... 74 2e-011
gb|CF395787.1|CF395787 RTDS2_17_A05.g1_A021 Drought-stresse... 74 2e-011
gb|CF473526.1|CF473526 RTWW2_3_F06.b2_A021 Well-watered lob... 74 2e-011
gb|CF473569.1|CF473569 RTWW2_3_F06.g1_A021 Well-watered lob... 74 2e-011
gb|CF475025.1|CF475025 RTWW2_5_F07.b1_A021 Well-watered lob... 74 2e-011
gb|CF475049.1|CF475049 RTWW2_5_F07.g1_A021 Well-watered lob... 74 2e-011
gb|CF667296.1|CF667296 RTCNT1_29_G06.b1_A029 Root control P... 74 2e-011
gb|CF667373.1|CF667373 RTCNT1_29_G06.g1_A029 Root control P... 74 2e-011
gb|BX678604.1|BX678604 BX678604 RS Pinus pinaster cDNA clon... 74 2e-011
gb|CO165239.1|CO165239 FLD1_53_F10.b1_A029 Root flooded Pin... 74 2e-011
gb|CO165319.1|CO165319 FLD1_53_F10.g1_A029 Root flooded Pin... 74 2e-011
gb|CO165967.1|CO165967 FLD1_58_H07.b1_A029 Root flooded Pin... 74 2e-011
gb|CO172351.1|CO172351 NDL1_29_E03.b1_A029 Needles control ... 74 2e-011
gb|CO172429.1|CO172429 NDL1_29_E03.g1_A029 Needles control ... 74 2e-011
gb|CO174494.1|CO174494 NDL1_44_H05.b1_A029 Needles control ... 74 2e-011
gb|CO174583.1|CO174583 NDL1_44_H05.g1_A029 Needles control ... 74 2e-011
gb|CO200960.1|CO200960 RTCNT2_2_E08.g1_A029 Root control 2 ... 74 2e-011
gb|CO362352.1|CO362352 RTK1_3_B12.b1_A029 Roots minus potas... 74 2e-011
gb|CO364214.1|CO364214 RTK1_14_H10.b1_A029 Roots minus pota... 74 2e-011
gb|CO364302.1|CO364302 RTK1_14_H10.g1_A029 Roots minus pota... 74 2e-011
gb|CO364533.1|CO364533 RTK1_16_F09.b1_A029 Roots minus pota... 74 2e-011
gb|CO364617.1|CO364617 RTK1_16_F09.g1_A029 Roots minus pota... 74 2e-011
gb|CO365638.1|CO365638 RTK1_18_G01.b1_A029 Roots minus pota... 74 2e-011
gb|CO365720.1|CO365720 RTK1_18_G01.g1_A029 Roots minus pota... 74 2e-011
gb|CO366239.1|CO366239 RTK1_26_E05.g1_A029 Roots minus pota... 74 2e-011
gb|CO366526.1|CO366526 RTK1_28_H11.b1_A029 Roots minus pota... 74 2e-011
gb|CO366611.1|CO366611 RTK1_28_H11.g1_A029 Roots minus pota... 74 2e-011
gb|CO366806.1|CO366806 RTK1_30_F01.b1_A029 Roots minus pota... 74 2e-011
gb|CO366880.1|CO366880 RTK1_30_F01.g1_A029 Roots minus pota... 74 2e-011
gb|CO366945.1|CO366945 RTK1_31_E03.b1_A029 Roots minus pota... 74 2e-011
gb|CV032418.1|CV032418 RTNACL1_8_B01.b1_A029 Roots plus add... 74 2e-011
gb|CV032482.1|CV032482 RTNACL1_8_B01.g1_A029 Roots plus add... 74 2e-011
gb|CV032615.1|CV032615 RTNACL1_17_G06.b1_A029 Roots plus ad... 74 2e-011
gb|CV034642.1|CV034642 RTNACL1_10_C11.g1_A029 Roots plus ad... 74 2e-011
gb|CV035015.1|CV035015 RTNACL1_13_C12.b1_A029 Roots plus ad... 74 2e-011
gb|CV036284.1|CV036284 RTNACL1_58_C04.b1_A029 Roots plus ad... 74 2e-011
gb|CX713004.1|CX713004 RTPQ1_6_H02.b1_A032 Roots treated wi... 74 2e-011
gb|CX713080.1|CX713080 RTPQ1_6_H02.g1_A032 Roots treated wi... 74 2e-011
gb|CX713959.1|CX713959 RTPQ1_15_C12.g1_A032 Roots treated w... 74 2e-011
gb|CX714743.1|CX714743 RTPQ1_26_F01.b1_A032 Roots treated w... 74 2e-011
gb|CX715196.1|CX715196 RTPQ1_32_H07.b1_A032 Roots treated w... 74 2e-011
gb|CX715248.1|CX715248 RTPQ1_32_H07.g1_A032 Roots treated w... 74 2e-011
gb|DN626434.1|DN626434 EST977250 Subtracted pine embryo lib... 74 2e-011
gb|DN627012.1|DN627012 EST977828 Subtracted pine embryo lib... 74 2e-011
gb|DN627235.1|DN627235 EST978051 Subtracted pine embryo lib... 74 2e-011
gb|DN627586.1|DN627586 EST978402 Subtracted pine embryo lib... 74 2e-011
gb|DN629372.1|DN629372 EST980188 Subtracted pine embryo lib... 74 2e-011
gb|DN629853.1|DN629853 EST980669 Subtracted pine embryo lib... 74 2e-011
gb|DN629909.1|DN629909 EST980725 Subtracted pine embryo lib... 74 2e-011
gb|DN630200.1|DN630200 EST981016 Subtracted pine embryo lib... 74 2e-011
gb|DN631439.1|DN631439 EST982255 Subtracted pine embryo lib... 74 2e-011
gb|DN631879.1|DN631879 EST982695 Subtracted pine embryo lib... 74 2e-011
gb|DN632035.1|DN632035 EST982851 Subtracted pine embryo lib... 74 2e-011
gb|DN632324.1|DN632324 EST983140 Subtracted pine embryo lib... 74 2e-011
gb|DN632951.1|DN632951 EST983767 Subtracted pine embryo lib... 74 2e-011
gb|DN633318.1|DN633318 EST984134 Subtracted pine embryo lib... 74 2e-011
gb|DN633510.1|DN633510 EST984326 Subtracted pine embryo lib... 74 2e-011
gb|DN633945.1|DN633945 EST984761 Subtracted pine embryo lib... 74 2e-011
gb|DN634184.1|DN634184 EST985000 Subtracted pine embryo lib... 74 2e-011
gb|DR014382.1|DR014382 HEAT1_49_D08.b1_A029 Root at 37 C fo... 74 2e-011
gb|DR014461.1|DR014461 HEAT1_49_D08.g1_A029 Root at 37 C fo... 74 2e-011
gb|DR014726.1|DR014726 HEAT1_51_F07.b1_A029 Root at 37 C fo... 74 2e-011
gb|DR014810.1|DR014810 HEAT1_51_F07.g1_A029 Root at 37 C fo... 74 2e-011
gb|DR048804.1|DR048804 RTBOR1_11_H04.b1_A029 Roots plus add... 74 2e-011
gb|DR048894.1|DR048894 RTBOR1_12_A06.b1_A029 Roots plus add... 74 2e-011
gb|DR048975.1|DR048975 RTBOR1_12_A06.g1_A029 Roots plus add... 74 2e-011
gb|DR049935.1|DR049935 RTBOR1_20_C11.b1_A029 Roots plus add... 74 2e-011
gb|DR060019.1|DR060019 RTNIT1_25_E05.b1_A029 Roots minus ni... 74 2e-011
gb|DR060098.1|DR060098 RTNIT1_25_E05.g1_A029 Roots minus ni... 74 2e-011
gb|DR079275.1|DR079275 RTFEPL1_10_F02.b1_A029 Roots plus ad... 74 2e-011
gb|DR089187.1|DR089187 RTAL1_7_C08.b1_A029 Roots plus added... 74 2e-011
gb|DR089261.1|DR089261 RTAL1_7_C08.g1_A029 Roots plus added... 74 2e-011
gb|DR109755.1|DR109755 RTS1_4_B05.g1_A029 Roots minus sulfu... 74 2e-011
gb|DR116528.1|DR116528 RTMG1_1_C01.b1_A029 Roots minus magn... 74 2e-011
gb|DR116882.1|DR116882 RTMG1_3_H01.b1_A029 Roots minus magn... 74 2e-011
gb|DR117184.1|DR117184 RTMG1_5_G03.b1_A029 Roots minus magn... 74 2e-011
gb|DR117253.1|DR117253 RTMG1_5_G03.g1_A029 Roots minus magn... 74 2e-011
gb|DR118098.1|DR118098 RTMG1_11_D01.b1_A029 Roots minus mag... 74 2e-011
gb|DR119412.1|DR119412 RTMG1_23_C12.b1_A029 Roots minus mag... 74 2e-011
gb|DR119493.1|DR119493 RTMG1_23_C12.g1_A029 Roots minus mag... 74 2e-011
gb|DR119658.1|DR119658 RTMG1_24_D08.g1_A029 Roots minus mag... 74 2e-011
gb|DR120523.1|DR120523 RTMG1_30_F12.b1_A029 Roots minus mag... 74 2e-011
gb|DR120647.1|DR120647 RTMG1_31_C05.b1_A029 Roots minus mag... 74 2e-011
gb|DR120732.1|DR120732 RTMG1_31_C05.g1_A029 Roots minus mag... 74 2e-011
gb|DR160254.1|DR160254 RTFE1_5_A04.b1_A029 Roots minus iron... 74 2e-011
gb|DR160339.1|DR160339 RTFE1_5_A04.g1_A029 Roots minus iron... 74 2e-011
gb|DR161623.1|DR161623 RTFE1_12_H10.g1_A029 Roots minus iro... 74 2e-011
gb|DR161713.1|DR161713 RTFE1_13_B03.g1_A029 Roots minus iro... 74 2e-011
gb|DR161800.1|DR161800 RTFE1_14_B03.b1_A029 Roots minus iro... 74 2e-011
gb|DR161884.1|DR161884 RTFE1_14_B03.g1_A029 Roots minus iro... 74 2e-011
gb|DR164012.1|DR164012 RTFE1_46_G06.b1_A029 Roots minus iro... 74 2e-011
gb|DR164102.1|DR164102 RTFE1_46_G06.g1_A029 Roots minus iro... 74 2e-011
gb|DR167506.1|DR167506 RTPHOS1_19_F09.b1_A029 Roots minus p... 74 2e-011
gb|DR167936.1|DR167936 RTPHOS1_22_C09.b1_A029 Roots minus p... 74 2e-011
gb|DR168806.1|DR168806 RTPHOS1_28_A08.b1_A029 Roots minus p... 74 2e-011
gb|DR168878.1|DR168878 RTPHOS1_28_A08.g1_A029 Roots minus p... 74 2e-011
gb|DR177087.1|DR177087 RTMNUT1_3_B06.b1_A029 Roots minus mi... 74 2e-011
gb|DR177160.1|DR177160 RTMNUT1_3_B06.g1_A029 Roots minus mi... 74 2e-011
gb|DR177206.1|DR177206 RTMNUT1_3_G04.g1_A029 Roots minus mi... 74 2e-011
gb|DR179639.1|DR179639 RTMNUT1_23_H08.b2_A029 Roots minus m... 74 2e-011
gb|DR181777.1|DR181777 RTMNUT1_41_A08.b1_A029 Roots minus m... 74 2e-011
gb|DR181859.1|DR181859 RTMNUT1_41_A08.g1_A029 Roots minus m... 74 2e-011
gb|DR386746.1|DR386746 RTHG1_17_E09.b1_A029 Roots plus adde... 74 2e-011
gb|DR387999.1|DR387999 RTHG1_25_C04.g1_A029 Roots plus adde... 74 2e-011
gb|DR388505.1|DR388505 RTHG1_28_E04.g1_A029 Roots plus adde... 74 2e-011
gb|DR388710.1|DR388710 RTHG1_30_B09.b1_A029 Roots plus adde... 74 2e-011
gb|DR682449.1|DR682449 EST1072524 Normalized pine embryo li... 74 2e-011
gb|DR688764.1|DR688764 EST1078849 Normalized pine embryo li... 74 2e-011
gb|DR695054.1|DR695054 EST1085147 Normalized pine embryo li... 74 2e-011
gb|DR742143.1|DR742143 RTCU1_2_B07.b1_A029 Roots plus added... 74 2e-011
gb|DR742208.1|DR742208 RTCU1_2_B07.g1_A029 Roots plus added... 74 2e-011
gb|BM367324.1|BM367324 NXLV_047_G03_F NXLV (Nsf Xylem Late ... 72 8e-011
gb|DR168006.1|DR168006 RTPHOS1_22_C09.g1_A029 Roots minus p... 70 3e-010
gb|AW290737.1|AW290737 NXNV046D06F Nsf Xylem Normal wood Ve... 68 1e-009
gb|BX252596.1|BX252596 BX252596 Pinus pinaster differenciat... 68 1e-009
gb|BX252900.1|BX252900 BX252900 Pinus pinaster differenciat... 68 1e-009
gb|CD027403.1|CD027403 NXNV046D06 Nsf Xylem Normal wood Ver... 68 1e-009
gb|BX681362.1|BX681362 BX681362 RS Pinus pinaster cDNA clon... 66 5e-009
gb|DN629335.1|DN629335 EST980151 Subtracted pine embryo lib... 66 5e-009
gb|DN632290.1|DN632290 EST983106 Subtracted pine embryo lib... 66 5e-009
gb|DR116965.1|DR116965 RTMG1_3_H01.g1_A029 Roots minus magn... 66 5e-009
gb|DR388422.1|DR388422 RTHG1_28_E04.b1_A029 Roots plus adde... 66 5e-009
gb|DT630232.1|DT630232 EST1154644 Subtracted pine embryo li... 66 5e-009
gb|DT630485.1|DT630485 EST1154897 Subtracted pine embryo li... 66 5e-009
gb|AW290522.1|AW290522 NXNV025B05F Nsf Xylem Normal wood Ve... 64 2e-008
gb|BE187292.1|BE187292 NXNV_162_B07_F Nsf Xylem Normal wood... 64 2e-008
gb|BF010499.1|BF010499 NXCI_084_G05_F NXCI (Nsf Xylem Compr... 64 2e-008
gb|BI077381.1|BI077381 NXPV_096_F05_F NXPV (Nsf Xylem Plani... 64 2e-008
gb|BM427813.1|BM427813 NXRV_003_F06_F NXRV (Nsf Xylem Root ... 64 2e-008
gb|BQ655596.1|BQ655596 NXRV096_F06_F NXRV (Nsf Xylem Root w... 64 2e-008
gb|BQ703111.1|BQ703111 NXSI_136_F02_F NXSI (Nsf Xylem Side ... 64 2e-008
gb|CD027181.1|CD027181 NXNV025B05 Nsf Xylem Normal wood Ver... 64 2e-008
gb|CF394822.1|CF394822 RTDS2_7_D02.g1_A021 Drought-stressed... 64 2e-008
gb|CF473787.1|CF473787 RTWW2_4_C01.g1_A021 Well-watered lob... 64 2e-008
gb|CF479400.1|CF479400 RTWW3_23_B10.g1_A022 Well-watered lo... 64 2e-008
gb|CF666231.1|CF666231 RTCNT1_21_G03.g1_A029 Root control P... 64 2e-008
gb|CF669306.1|CF669306 RTCNT1_42_F05.b1_A029 Root control P... 64 2e-008
gb|BX679813.1|BX679813 BX679813 RS Pinus pinaster cDNA clon... 64 2e-008
gb|BX680731.1|BX680731 BX680731 RS Pinus pinaster cDNA clon... 64 2e-008
gb|CO160604.1|CO160604 FLD1_22_E10.b1_A029 Root flooded Pin... 64 2e-008
gb|CO164513.1|CO164513 FLD1_48_B06.g1_A029 Root flooded Pin... 64 2e-008
gb|CO176666.1|CO176666 NDL1_63_A09.g1_A029 Needles control ... 64 2e-008
gb|CO199803.1|CO199803 GEO2_3_C10.g1_A032 Root gravitropism... 64 2e-008
gb|CO200173.1|CO200173 GEO2_5_G10.g1_A032 Root gravitropism... 64 2e-008
gb|CO200386.1|CO200386 GEO2_7_D06.b1_A032 Root gravitropism... 64 2e-008
gb|CO200466.1|CO200466 GEO2_7_D06.g1_A032 Root gravitropism... 64 2e-008
gb|CO368344.1|CO368344 RTK1_40_C07.b1_A029 Roots minus pota... 64 2e-008
gb|CO369749.1|CO369749 RTK1_53_A10.g1_A029 Roots minus pota... 64 2e-008
gb|CV031546.1|CV031546 RTNACL1_2_F04.b1_A029 Roots plus add... 64 2e-008
gb|CV033965.1|CV033965 RTNACL1_37_E07.g1_A029 Roots plus ad... 64 2e-008
gb|CV034654.1|CV034654 RTNACL1_10_E02.g1_A029 Roots plus ad... 64 2e-008
gb|CX646699.1|CX646699 COLD1_11_A08.b1_A029 Root cold Pinus... 64 2e-008
gb|CX646771.1|CX646771 COLD1_11_A08.g1_A029 Root cold Pinus... 64 2e-008
gb|DR015705.1|DR015705 STRS1_5_D07.b1_A034 Shoot tip pitch ... 64 2e-008
gb|DR015708.1|DR015708 STRS1_5_D10.b1_A034 Shoot tip pitch ... 64 2e-008
gb|DR021043.1|DR021043 STRS1_42_A09.b1_A034 Shoot tip pitch... 64 2e-008
gb|DR021115.1|DR021115 STRS1_42_A09.g1_A034 Shoot tip pitch... 64 2e-008
gb|DR022907.1|DR022907 STRS1_54_F08.b1_A034 Shoot tip pitch... 64 2e-008
gb|DR047440.1|DR047440 RTBOR1_1_C05.b1_A029 Roots plus adde... 64 2e-008
gb|DR052867.1|DR052867 RTCA1_7_A02.g1_A029 Roots minus calc... 64 2e-008
gb|DR053629.1|DR053629 RTCA1_12_H03.b1_A029 Roots minus cal... 64 2e-008
gb|DR054962.1|DR054962 RTCA1_20_E04.g1_A029 Roots minus cal... 64 2e-008
gb|DR057637.1|DR057637 RTNIT1_7_A05.b1_A029 Roots minus nit... 64 2e-008
gb|DR060091.1|DR060091 RTNIT1_25_D07.g1_A029 Roots minus ni... 64 2e-008
gb|DR090668.1|DR090668 RTAL1_16_D08.g1_A029 Roots plus adde... 64 2e-008
gb|DR100578.1|DR100578 STRR1_65_E10.b1_A033 Stem Response R... 64 2e-008
gb|DR109404.1|DR109404 RTS1_1_F11.g1_A029 Roots minus sulfu... 64 2e-008
gb|DR163460.1|DR163460 RTFE1_43_C01.b1_A029 Roots minus iro... 64 2e-008
gb|DR179282.1|DR179282 RTMNUT1_21_D06.b2_A029 Roots minus m... 64 2e-008
gb|DR388534.1|DR388534 RTHG1_28_G10.g1_A029 Roots plus adde... 64 2e-008
gb|CV036339.1|CV036339 RTNACL1_58_C04.g1_A029 Roots plus ad... 62 8e-008
gb|AW981550.1|AW981550 PC13H10 Pine TriplEx pollen cone lib... 60 3e-007
gb|BF517796.1|BF517796 NXSI_031_C12_F NXSI (Nsf Xylem Side ... 60 3e-007
gb|BX681192.1|BX681192 BX681192 RS Pinus pinaster cDNA clon... 60 3e-007
gb|DR161633.1|DR161633 RTFE1_13_B03.b1_A029 Roots minus iro... 60 3e-007
gb|DR177127.1|DR177127 RTMNUT1_3_G04.b1_A029 Roots minus mi... 60 3e-007
gb|DR386756.1|DR386756 RTHG1_17_F07.b1_A029 Roots plus adde... 60 3e-007
gb|BQ696482.1|BQ696482 NXPV_041_G09_F NXPV (Nsf Xylem Plani... 58 1e-006
gb|AA556894.1|AA556894 736 Loblolly pine C Pinus taeda cDNA... 56 5e-006
gb|BX682860.1|BX682860 BX682860 Pinus pinaster differenciat... 56 5e-006
gb|CV034587.1|CV034587 RTNACL1_10_E02.b1_A029 Roots plus ad... 56 5e-006
gb|CX649579.1|CX649579 COLD1_36_D11.b1_A029 Root cold Pinus... 56 5e-006
gb|CX714077.1|CX714077 RTPQ1_17_G07.b1_A032 Roots treated w... 56 5e-006
gb|DR682448.1|DR682448 EST1072523 Normalized pine embryo li... 56 5e-006
gb|AL751172.1|AL751172 AL751172 RS Pinus pinaster cDNA clon... 54 2e-005
gb|CO164553.1|CO164553 FLD1_48_F11.g1_A029 Root flooded Pin... 54 2e-005
gb|CO164480.1|CO164480 FLD1_48_F11.b1_A029 Root flooded Pin... 52 8e-005
gb|CO200086.1|CO200086 GEO2_5_G10.b1_A032 Root gravitropism... 52 8e-005
gb|CV033223.1|CV033223 RTNACL1_33_D06.b1_A029 Roots plus ad... 52 8e-005
gb|CV033690.1|CV033690 RTNACL1_36_C01.b1_A029 Roots plus ad... 52 8e-005
gb|CX649655.1|CX649655 COLD1_36_D11.g1_A029 Root cold Pinus... 52 8e-005
gb|DR015877.1|DR015877 STRS1_6_F05.b1_A034 Shoot tip pitch ... 52 8e-005
gb|DR054888.1|DR054888 RTCA1_20_E04.b1_A029 Roots minus cal... 52 8e-005
gb|DR090593.1|DR090593 RTAL1_16_D08.b1_A029 Roots plus adde... 52 8e-005
gb|DR098216.1|DR098216 STRR1_39_H06.g1_A033 Stem Response R... 52 8e-005
gb|BF221030.1|BF221030 NXCI_162_C03_F NXCI (Nsf Xylem Compr... 50 3e-004
gb|CD016396.1|CD016396 NXCI_043_A05_F NXCI (Nsf Xylem Compr... 50 3e-004
gb|CF394028.1|CF394028 RTDS2_2_H10.g1_A021 Drought-stressed... 50 3e-004
gb|CF395103.1|CF395103 RTDS2_9_A08.g1_A021 Drought-stressed... 50 3e-004
gb|CF398945.1|CF398945 RTDS3_11_D06.g1_A022 Drought-stresse... 50 3e-004
gb|CF471100.1|CF471100 RTDS1_16_F09.g1_A015 Drought-stresse... 50 3e-004
gb|CF668011.1|CF668011 RTCNT1_33_G11.g1_A029 Root control P... 50 3e-004
gb|CO364952.1|CO364952 RTK1_22_F08.g1_A029 Roots minus pota... 50 3e-004
gb|DR049412.1|DR049412 RTBOR1_16_G03.b1_A029 Roots plus add... 50 3e-004
gb|DR056041.1|DR056041 RTCA1_27_E07.g1_A029 Roots minus cal... 50 3e-004
gb|DR079033.1|DR079033 RTFEPL1_8_C01.g1_A029 Roots plus add... 50 3e-004
gb|DR181532.1|DR181532 RTMNUT1_39_B03.g2_A029 Roots minus m... 50 3e-004
gb|DR685405.1|DR685405 EST1075482 Normalized pine embryo li... 50 3e-004
gb|DR692360.1|DR692360 EST1082448 Normalized pine embryo li... 50 3e-004
gb|DT632629.1|DT632629 EST1147560 Normalized pine embryo li... 50 3e-004
gb|AL750379.1|AL750379 AL750379 RN Pinus pinaster cDNA clon... 48 0.001
gb|BG833034.1|BG833034 NXPV_088_C02_F NXPV (Nsf Xylem Plani... 48 0.001
gb|CF667193.1|CF667193 RTCNT1_28_E12.g1_A029 Root control P... 46 0.005
gb|CF669704.1|CF669704 RTCNT1_45_C04.g1_A029 Root control P... 46 0.005
gb|DR180466.1|DR180466 RTMNUT1_28_G01.g1_A029 Roots minus m... 46 0.005
gb|AA739575.1|AA739575 340 PtIFG2 Pinus taeda cDNA clone 85... 42 0.075
gb|AI813068.1|AI813068 20D12 Pine Lambda Zap Xylem library ... 42 0.075
gb|AW888166.1|AW888166 NXNV_126_E08_F Nsf Xylem Normal wood... 42 0.075
gb|BF517268.1|BF517268 NXSI_012_D07_F NXSI (Nsf Xylem Side ... 42 0.075
gb|BF517695.1|BF517695 NXSI_027_A12_F NXSI (Nsf Xylem Side ... 42 0.075
gb|BQ701659.1|BQ701659 NXSI_118_B04_F NXSI (Nsf Xylem Side ... 42 0.075
gb|CD020665.1|CD020665 NXNV_082_F03_F Nsf Xylem Normal wood... 42 0.075
gb|CF390033.1|CF390033 RTDR2_12_E04.b1_A021 Loblolly pine r... 42 0.075
gb|CF394698.1|CF394698 RTDS2_7_D02.b1_A021 Drought-stressed... 42 0.075
gb|CF479310.1|CF479310 RTWW3_23_B10.b1_A022 Well-watered lo... 42 0.075
gb|BX677750.1|BX677750 BX677750 RN Pinus pinaster cDNA clon... 42 0.075
gb|BX678456.1|BX678456 BX678456 RS Pinus pinaster cDNA clon... 42 0.075
gb|BX682653.1|BX682653 BX682653 Pinus pinaster differenciat... 42 0.075
gb|BX784134.1|BX784134 BX784134 Pinus pinaster differenciat... 42 0.075
gb|CO176595.1|CO176595 NDL1_63_A09.b1_A029 Needles control ... 42 0.075
gb|CV031630.1|CV031630 RTNACL1_2_F04.g1_A029 Roots plus add... 42 0.075
gb|CV033348.1|CV033348 RTNACL1_34_A10.b1_A029 Roots plus ad... 42 0.075
gb|CX651223.1|CX651223 COLD1_51_A08.b1_A029 Root cold Pinus... 42 0.075
gb|CX714111.1|CX714111 RTPQ1_17_G07.g1_A032 Roots treated w... 42 0.075
gb|CX715322.1|CX715322 RTPQ1_33_H12.b1_A032 Roots treated w... 42 0.075
gb|DR015957.1|DR015957 STRS1_6_F05.g1_A034 Shoot tip pitch ... 42 0.075
gb|DR053717.1|DR053717 RTCA1_12_H03.g1_A029 Roots minus cal... 42 0.075
gb|DR089625.1|DR089625 RTAL1_9_H03.g1_A029 Roots plus added... 42 0.075
gb|DR110002.1|DR110002 RTS1_1_F11.b1_A029 Roots minus sulfu... 42 0.075
gb|DR388449.1|DR388449 RTHG1_28_G10.b1_A029 Roots plus adde... 42 0.075
gb|CD018811.1|CD018811 NXLV_051_F01_F NXLV (Nsf Xylem Late ... 40 0.30
gb|CF666166.1|CF666166 RTCNT1_21_G03.b1_A029 Root control P... 40 0.30
gb|AW290475.1|AW290475 NXNV027C12F Nsf Xylem Normal wood Ve... 38 1.2
gb|BE657129.1|BE657129 NXCI_064_C01_F NXCI (Nsf Xylem Compr... 38 1.2
gb|BQ635052.1|BQ635052 NXRV076_D04_F NXRV (Nsf Xylem Root w... 38 1.2
gb|CD027133.1|CD027133 NXNV027C12 Nsf Xylem Normal wood Ver... 38 1.2
gb|CF476796.1|CF476796 RTWW3_3_A09.g1_A022 Well-watered lob... 38 1.2
gb|CF664620.1|CF664620 RTCNT1_11_A09.b1_A029 Root control P... 38 1.2
gb|CF670311.1|CF670311 RTCNT1_49_A04.g1_A029 Root control P... 38 1.2
gb|BX677154.1|BX677154 BX677154 RN Pinus pinaster cDNA clon... 38 1.2
gb|BX683059.1|BX683059 BX683059 Pinus pinaster differenciat... 38 1.2
gb|CO162956.1|CO162956 FLD1_38_C03.g1_A029 Root flooded Pin... 38 1.2
gb|CO174563.1|CO174563 NDL1_44_F09.g1_A029 Needles control ... 38 1.2
gb|CO175443.1|CO175443 NDL1_54_F08.g1_A029 Needles control ... 38 1.2
gb|CO368406.1|CO368406 RTK1_40_A09.g1_A029 Roots minus pota... 38 1.2
gb|CX715346.1|CX715346 RTPQ1_33_C07.g1_A032 Roots treated w... 38 1.2
gb|DN461808.1|DN461808 EST957607 Sequencing ESTs from loblo... 38 1.2
gb|DR022890.1|DR022890 STRS1_54_D12.b1_A034 Shoot tip pitch... 38 1.2
gb|DR022968.1|DR022968 STRS1_54_D12.g1_A034 Shoot tip pitch... 38 1.2
gb|DR024221.1|DR024221 STRS1_63_E12.b1_A034 Shoot tip pitch... 38 1.2
gb|DR024271.1|DR024271 STRS1_63_E12.g1_A034 Shoot tip pitch... 38 1.2
gb|DR162032.1|DR162032 RTFE1_15_H01.b1_A029 Roots minus iro... 38 1.2
gb|DR165694.1|DR165694 RTPHOS1_6_F04.g1_A029 Roots minus ph... 38 1.2
gb|DR169380.1|DR169380 RTPHOS1_32_B08.b1_A029 Roots minus p... 38 1.2
gb|DR683192.1|DR683192 EST1073268 Normalized pine embryo li... 38 1.2
gb|DR744075.1|DR744075 RTCU1_20_C05.b1_A029 Roots plus adde... 38 1.2
gb|DR744157.1|DR744157 RTCU1_20_C05.g1_A029 Roots plus adde... 38 1.2
gb|DT627069.1|DT627069 EST1160145 Sequencing ESTs from lobl... 38 1.2
dbj|BD236368.1| Materials and method for modification of pl... 38 1.2
gb|BE582346.1|BE582346 NXCI_032_C10_F NXCI (Nsf Xylem Compr... 36 4.6
gb|BF186253.1|BF186253 NXCI_135_B06_F NXCI (Nsf Xylem Compr... 36 4.6
gb|CO164438.1|CO164438 FLD1_48_B06.b1_A029 Root flooded Pin... 36 4.6
gb|CO362851.1|CO362851 RTK1_6_D07.b1_A029 Roots minus potas... 36 4.6
gb|CO363722.1|CO363722 RTK1_11_A04.g1_A029 Roots minus pota... 36 4.6
gb|CO368773.1|CO368773 RTK1_42_E12.g1_A029 Roots minus pota... 36 4.6
gb|DR176900.1|DR176900 RTMNUT1_1_E09.g1_A029 Roots minus mi... 36 4.6
gb|DR388115.1|DR388115 RTHG1_26_F06.b1_A029 Roots plus adde... 36 4.6
>gb|CF389500.1|CF389500 RTDR2_7_F04.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_7_F04_A021 5', mRNA sequence
Length = 756
Score = 81.8 bits (41), Expect = 9e-014
Identities = 199/251 (79%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||||||||| || ||
Sbjct: 730 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagactttcatgccagac 671
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 670 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 611
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 610 gagcacaaaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 551
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 550 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 491
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 490 ctgctaccacc 480
Score = 73.8 bits (37), Expect = 2e-011
Identities = 121/149 (81%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 418 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 359
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || |||
Sbjct: 358 ggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccc 299
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 298 ttgtccggatggtttttgatagcagcctt 270
>gb|DN633740.1|DN633740 EST984556 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTADB22, mRNA sequence
Length = 781
Score = 81.8 bits (41), Expect = 9e-014
Identities = 199/251 (79%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| |||||||| ||
Sbjct: 346 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcataccagac 287
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 286 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 227
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 226 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 167
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 166 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 107
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 106 ctgctaccacc 96
Score = 65.9 bits (33), Expect = 5e-009
Identities = 75/89 (84%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || |||||||||||||| ||||| || ||| ||||||
Sbjct: 544 aatacaatgtcaccagtaactgtgtcaggcgcttcatctgcttccccttcgaaagtgatc 485
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 484 ctctgaccattttgcattcccttctcaac 456
Score = 48.1 bits (24), Expect = 0.001
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 675 cccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttgaattgg 734
||||||||||| |||| |||||||| ||||| || ||||| || || |||||||| ||
Sbjct: 775 cccttcatgaatggccgctggtaaacaggcattccttcatcattaatagccttgaactga 716
Query: 735 tcaggtttaacaacttcacc 754
| || ||||||||||||||
Sbjct: 715 cctggcttaacaacttcacc 696
>gb|AW064596.1|AW064596 ST33D09 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST33D09, mRNA sequence
Length = 591
Score = 77.8 bits (39), Expect = 1e-012
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 1413 ccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgt 1472
||||| || |||||||| || || ||||||||||| |||||||||||||| ||||| | |
Sbjct: 422 ccacctcctcccattccntctttcagggcatcttctccatactgatcatatatctccctt 363
Query: 1473 ttctctggatcactcaaaacctcata 1498
|| |||||||||||||| || |||||
Sbjct: 362 ttttctggatcactcaagacttcata 337
>gb|BI397729.1|BI397729 NXPV_104_F04_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_104_F04 5' similar to Arabidopsis
thaliana sequence At3g44110 dnaJ protein homolog atj3 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 478
Score = 77.8 bits (39), Expect = 1e-012
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 1413 ccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgt 1472
||||| || |||||||| || || ||||||||||| |||||||||||||| ||||| | |
Sbjct: 391 ccacctcctcccattccctctttcagggcatcttctccatactgatcatatatctcccnt 332
Query: 1473 ttctctggatcactcaaaacctcata 1498
|| |||||||||||||| || |||||
Sbjct: 331 ttttctggatcactcaagacttcata 306
>gb|BE123609.1|BE123609 NXNV_146_C11_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV_146_C11 5' similar to Arabidopsis thaliana sequence
At5g22060 DNAJ PROTEIN HOMOLOG ATJ see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 306
Score = 75.8 bits (38), Expect = 5e-012
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 1413 ccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgt 1472
||||| || |||||||| || || ||||||||||| |||||||||||||| ||||| | |
Sbjct: 178 ccacctcctcccattccctctttcagggcatcttctccatactgatcatatatctccctt 119
Query: 1473 ttctctggatcactcaaaacctcata 1498
|| |||||||||||||| || |||||
Sbjct: 118 ttttctggatcactcaagacttcata 93
>gb|CF390139.1|CF390139 RTDR2_12_E04.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_12_E04_A021 5', mRNA
sequence
Length = 674
Score = 75.8 bits (38), Expect = 5e-012
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 1413 ccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgt 1472
||||| || |||||||| || || ||||||||||| |||||||||||||| ||||| | |
Sbjct: 340 ccacctcctcccattccctctttcagggcatcttctccatactgatcatatatctccctt 281
Query: 1473 ttctctggatcactcaaaacctcata 1498
|| |||||||||||||| || |||||
Sbjct: 280 ttttctggatcactcaagacttcata 255
>gb|CF473550.1|CF473550 RTWW2_3_H01.g1_A021 Well-watered loblolly pine roots WW2 Pinus taeda
cDNA clone RTWW2_3_H01_A021 5', mRNA sequence
Length = 702
Score = 75.8 bits (38), Expect = 5e-012
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 1413 ccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgt 1472
||||| || |||||||| || || ||||||||||| |||||||||||||| ||||| | |
Sbjct: 370 ccacctcctcccattccctctttcagggcatcttctccatactgatcatatatctccctt 311
Query: 1473 ttctctggatcactcaaaacctcata 1498
|| |||||||||||||| || |||||
Sbjct: 310 ttttctggatcactcaagacttcata 285
>gb|CF669350.1|CF669350 RTCNT1_42_F05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_42_F05_A029 5', mRNA sequence
Length = 656
Score = 75.8 bits (38), Expect = 5e-012
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 1413 ccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgt 1472
||||| || |||||||| || || ||||||||||| |||||||||||||| ||||| | |
Sbjct: 405 ccacctcctcccattccctctttcagggcatcttctccatactgatcatatatctccctt 346
Query: 1473 ttctctggatcactcaaaacctcata 1498
|| |||||||||||||| || |||||
Sbjct: 345 ttttctggatcactcaagacttcata 320
>gb|CO364076.1|CO364076 RTK1_13_C01.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_13_C01_A029 5', mRNA sequence
Length = 902
Score = 75.8 bits (38), Expect = 5e-012
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 1413 ccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgt 1472
||||| || |||||||| || || ||||||||||| |||||||||||||| ||||| | |
Sbjct: 132 ccacctcctcccattccctctttcagggcatcttctccatactgatcatatatctccctt 73
Query: 1473 ttctctggatcactcaaaacctcata 1498
|| |||||||||||||| || |||||
Sbjct: 72 ttttctggatcactcaagacttcata 47
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 701 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 642
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 641 tgtccccagttacagtgtccggcgcttcatcagcttcacc 602
>gb|CO368425.1|CO368425 RTK1_40_C07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_40_C07_A029 5', mRNA sequence
Length = 813
Score = 75.8 bits (38), Expect = 5e-012
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 1413 ccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgt 1472
||||| || |||||||| || || ||||||||||| |||||||||||||| ||||| | |
Sbjct: 382 ccacctcctcccattccctctttcagggcatcttctccatactgatcatatatctccctt 323
Query: 1473 ttctctggatcactcaaaacctcata 1498
|| |||||||||||||| || |||||
Sbjct: 322 ttttctggatcactcaagacttcata 297
>gb|CV033295.1|CV033295 RTNACL1_33_D06.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_33_D06_A029 5', mRNA sequence
Length = 600
Score = 75.8 bits (38), Expect = 5e-012
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 1413 ccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgt 1472
||||| || |||||||| || || ||||||||||| |||||||||||||| ||||| | |
Sbjct: 409 ccacctcctcccattccctctttcagggcatcttctccatactgatcatatatctccctt 350
Query: 1473 ttctctggatcactcaaaacctcata 1498
|| |||||||||||||| || |||||
Sbjct: 349 ttttctggatcactcaagacttcata 324
>gb|CX651299.1|CX651299 COLD1_51_A08.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_51_A08_A029 5', mRNA sequence
Length = 516
Score = 75.8 bits (38), Expect = 5e-012
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 1413 ccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgt 1472
||||| || |||||||| || || ||||||||||| |||||||||||||| ||||| | |
Sbjct: 352 ccacctcctcccattccctctttcagggcatcttctccatactgatcatatatctccctt 293
Query: 1473 ttctctggatcactcaaaacctcata 1498
|| |||||||||||||| || |||||
Sbjct: 292 ttttctggatcactcaagacttcata 267
>gb|DR060009.1|DR060009 RTNIT1_25_D07.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_25_D07_A029 3', mRNA sequence
Length = 802
Score = 75.8 bits (38), Expect = 5e-012
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 1413 ccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgt 1472
||||| || |||||||| || || ||||||||||| |||||||||||||| ||||| | |
Sbjct: 432 ccacctcctcccattccctctttcagggcatcttctccatactgatcatatatctccctt 491
Query: 1473 ttctctggatcactcaaaacctcata 1498
|| |||||||||||||| || |||||
Sbjct: 492 ttttctggatcactcaagacttcata 517
>gb|DR089543.1|DR089543 RTAL1_9_H03.b1_A029 Roots plus added aluminum Pinus taeda cDNA clone
RTAL1_9_H03_A029 3', mRNA sequence
Length = 768
Score = 75.8 bits (38), Expect = 5e-012
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 1413 ccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgt 1472
||||| || |||||||| || || ||||||||||| |||||||||||||| ||||| | |
Sbjct: 382 ccacctcctcccattccctctttcagggcatcttctccatactgatcatatatctccctt 441
Query: 1473 ttctctggatcactcaaaacctcata 1498
|| |||||||||||||| || |||||
Sbjct: 442 ttttctggatcactcaagacttcata 467
>gb|DR163547.1|DR163547 RTFE1_43_C01.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_43_C01_A029 5', mRNA sequence
Length = 821
Score = 75.8 bits (38), Expect = 5e-012
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 1413 ccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgt 1472
||||| || |||||||| || || ||||||||||| |||||||||||||| ||||| | |
Sbjct: 369 ccacctcctcccattccctctttcagggcatcttctccatactgatcatatatctccctt 310
Query: 1473 ttctctggatcactcaaaacctcata 1498
|| |||||||||||||| || |||||
Sbjct: 309 ttttctggatcactcaagacttcata 284
>gb|DR182342.1|DR182342 RTMNUT1_44_A01.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_44_A01_A029 5', mRNA sequence
Length = 695
Score = 75.8 bits (38), Expect = 5e-012
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 1413 ccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgt 1472
||||| || |||||||| || || ||||||||||| |||||||||||||| ||||| | |
Sbjct: 360 ccacctcctcccattccctctttcagggcatcttctccatactgatcatatatctccctt 301
Query: 1473 ttctctggatcactcaaaacctcata 1498
|| |||||||||||||| || |||||
Sbjct: 300 ttttctggatcactcaagacttcata 275
>gb|AW754622.1|AW754622 PC04D07 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC04D07, mRNA sequence
Length = 540
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 419 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 360
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 359 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 307
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 155 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 96
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 95 ctctgaccattttgcattcccttctcaac 67
>gb|BX249446.1|BX249446 BX249446 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP024B04, mRNA sequence
Length = 669
Score = 73.8 bits (37), Expect = 2e-011
Identities = 121/149 (81%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 336 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 277
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||||||||| || || || ||||| ||||| || || || || |||
Sbjct: 276 ggatcactaagtacctcataggcctgagcaagttccttaaacttttctggatctccaccc 217
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
|| || || ||||| |||||||| |||||
Sbjct: 216 ttatccggatggtttttgatagcagcctt 188
Score = 54.0 bits (27), Expect = 2e-005
Identities = 193/248 (77%), Gaps = 3/248 (1%)
Strand = Plus / Minus
Query: 1107 tgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgagccc 1166
||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || || ||
Sbjct: 645 tgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagaccct 586
Query: 1167 tggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttggag 1226
||||||||| ||| ||||||| || |||||||| || || || |||||||| | |||
Sbjct: 585 tggcacccactgcatttcattgatgcgccagactttgaccctttccccttgcatntagag 526
Query: 1227 cagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttccaga 1286
|| | ||||| || || || || | ||||||||| ||||||||||||| |||||||
Sbjct: 525 cacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttccaat 466
Query: 1287 gaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctgctg 1343
|| || || | | ||| || |||||||| || ||||||||||||| |||||||||||
Sbjct: 465 gataccttcaaggggtgaacaacatcttcgcctctcctttgccttcgggttcccctgctg 406
Query: 1344 cttccacc 1351
|| |||||
Sbjct: 405 ctaccacc 398
>gb|BF186264.1|BF186264 NXCI_135_C06_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_135_C06 5' similar to Arabidopsis
thaliana sequence At3g44110 dnaJ protein homolog atj3 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 373
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 263 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 204
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 203 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 144
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 143 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 84
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 83 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 24
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 23 ctgctaccacc 13
>gb|BG318920.1|BG318920 NXPV_021_E01_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_021_E01 5' similar to Arabidopsis
thaliana sequence At3g44110 dnaJ protein homolog atj3
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 514
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 219 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 160
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 159 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 107
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 318 tcctcacactcatctaactccatgtctgttagct 285
>gb|BG318962.1|BG318962 NXPV_021_H11_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_021_H11 5' similar to Arabidopsis
thaliana sequence At3g44110 dnaJ protein homolog atj3
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 425
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 132 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 73
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 72 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 20
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 231 tcctcacactcatctaactccatgtctgttagct 198
>gb|BI643932.1|BI643932 NXPV_129_E11_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_129_E11 5' similar to Arabidopsis
thaliana sequence At3g44110 dnaJ protein homolog atj3
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 355
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 132 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 73
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 72 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 20
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 231 tcctcacactcatctaactccatgtctgttagct 198
>gb|BM157616.1|BM157616 NXLV_023_C12_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_023_C12 5' similar to Arabidopsis thaliana
sequence At3g44110 dnaJ protein homolog atj3 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 504
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 276 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 217
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 216 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 164
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 375 tcctcacactcatctaactccatgtctgttagct 342
>gb|BQ290662.1|BQ290662 NXRV048_A07_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV048_A07 5' similar to Arabidopsis thaliana
sequence At3g44110 dnaJ protein homolog atj3 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 626
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 268 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 209
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 208 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 149
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 148 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 89
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 88 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 29
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 28 ctgctaccacc 18
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 466 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 407
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 406 ctctgaccattttgcattcccttctcaac 378
>gb|BQ290752.1|BQ290752 NXRV049_C01_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV049_C01 5' similar to Arabidopsis thaliana
sequence At3g44110 dnaJ protein homolog atj3 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 412
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 268 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 209
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 208 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 149
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 148 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 89
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 88 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 29
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 28 ctgctaccacc 18
>gb|BQ696007.1|BQ696007 NXPV_035_D01_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_035_D01 5' similar to Arabidopsis
thaliana sequence At3g44110 dnaJ protein homolog atj3
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 519
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 132 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 73
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 72 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 20
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 231 tcctcacactcatctaactccatgtctgttagct 198
>gb|BQ696579.1|BQ696579 NXPV_042_H06_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_042_H06 5' similar to Arabidopsis
thaliana sequence At3g44110 dnaJ protein homolog atj3
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 521
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 132 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 73
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 72 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 20
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 231 tcctcacactcatctaactccatgtctgttagct 198
>gb|BQ696893.1|BQ696893 NXPV_046_F01_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_046_F01 5' similar to Arabidopsis
thaliana sequence At3g44110 dnaJ protein homolog atj3
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 585
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 132 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 73
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 72 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 20
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 231 tcctcacactcatctaactccatgtctgttagct 198
>gb|BQ697630.1|BQ697630 NXPV_059_A01_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_059_A01 5' similar to Arabidopsis
thaliana sequence At3g44110 dnaJ protein homolog atj3
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 299
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 132 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 73
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 72 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 20
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 231 tcctcacactcatctaactccatgtctgttagct 198
>gb|BQ697854.1|BQ697854 NXPV_061_F10_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_061_F10 5' similar to Arabidopsis
thaliana sequence At3g44110 dnaJ protein homolog atj3
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 507
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 132 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 73
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 72 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 20
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 231 tcctcacactcatctaactccatgtctgttagct 198
>gb|BQ698557.1|BQ698557 NXPV_071_D05_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_071_D05 5' similar to Arabidopsis
thaliana sequence At3g44110 dnaJ protein homolog atj3
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 528
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 132 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 73
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 72 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 20
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 231 tcctcacactcatctaactccatgtctgttagct 198
>gb|BQ702053.1|BQ702053 NXSI_123_G11_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_123_G11 5' similar to Arabidopsis thaliana
sequence At3g44110 dnaJ protein homolog atj3 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 398
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 298 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 239
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 238 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 179
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 178 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 119
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 118 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 59
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 58 ctgctaccacc 48
>gb|CF389385.1|CF389385 RTDR2_7_F04.b1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_7_F04_A021 3', mRNA
sequence
Length = 646
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 259 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 200
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 199 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 147
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 358 tcctcacactcatctaactccatgtctgttagct 325
>gb|CF391391.1|CF391391 RTDR3_1_C05.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_1_C05_A022 5', mRNA
sequence
Length = 698
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 352 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 411
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 412 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 464
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttc 949
||||||||||| |||||||| || || ||||||||||| |||||
Sbjct: 616 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttc 659
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Plus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 253 tcctcacactcatctaactccatgtctgttagct 286
>gb|CF395787.1|CF395787 RTDS2_17_A05.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_17_A05_A021 5', mRNA sequence
Length = 708
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 594 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 535
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 534 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 475
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 474 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 415
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 414 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 355
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 354 ctgctaccacc 344
Score = 73.8 bits (37), Expect = 2e-011
Identities = 121/149 (81%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 282 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 223
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || |||
Sbjct: 222 ggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccc 163
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 162 ttgtccggatggtttttgatagcagcctt 134
>gb|CF473526.1|CF473526 RTWW2_3_F06.b2_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_3_F06_A021 3', mRNA sequence
Length = 640
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 253 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 194
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 193 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 141
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 352 tcctcacactcatctaactccatgtctgttagct 319
>gb|CF473569.1|CF473569 RTWW2_3_F06.g1_A021 Well-watered loblolly pine roots WW2 Pinus taeda
cDNA clone RTWW2_3_F06_A021 5', mRNA sequence
Length = 683
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 536 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 477
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 476 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 417
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 416 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 357
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 356 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 297
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 296 ctgctaccacc 286
Score = 73.8 bits (37), Expect = 2e-011
Identities = 121/149 (81%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 224 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 165
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || |||
Sbjct: 164 ggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccc 105
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 104 ttgtccggatggtttttgatagcagcctt 76
Score = 36.2 bits (18), Expect = 4.6
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 977 ttgcattcccttctcaac 994
||||||||||||||||||
Sbjct: 663 ttgcattcccttctcaac 646
>gb|CF475025.1|CF475025 RTWW2_5_F07.b1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_5_F07_A021 3', mRNA sequence
Length = 609
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 187 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 128
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 127 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 75
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 286 tcctcacactcatctaactccatgtctgttagct 253
>gb|CF475049.1|CF475049 RTWW2_5_F07.g1_A021 Well-watered loblolly pine roots WW2 Pinus taeda
cDNA clone RTWW2_5_F07_A021 5', mRNA sequence
Length = 724
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 689 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 630
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 629 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 570
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 569 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 510
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 509 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 450
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 449 ctgctaccacc 439
Score = 73.8 bits (37), Expect = 2e-011
Identities = 121/149 (81%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 377 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 318
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || |||
Sbjct: 317 ggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccc 258
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 257 ttgtccggatggtttttgatagcagcctt 229
>gb|CF667296.1|CF667296 RTCNT1_29_G06.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_29_G06_A029 3', mRNA sequence
Length = 604
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 234 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 175
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 174 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 122
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 333 tcctcacactcatctaactccatgtctgttagct 300
>gb|CF667373.1|CF667373 RTCNT1_29_G06.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_29_G06_A029 5', mRNA sequence
Length = 649
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 536 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 477
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 476 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 417
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 416 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 357
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 356 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 297
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 296 ctgctaccacc 286
Score = 73.8 bits (37), Expect = 2e-011
Identities = 121/149 (81%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 224 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 165
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || |||
Sbjct: 164 ggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccc 105
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 104 ttgtccggatggtttttgatagcagcctt 76
>gb|BX678604.1|BX678604 BX678604 RS Pinus pinaster cDNA clone RS11H02, mRNA sequence
Length = 592
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 292 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 233
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 232 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 180
Score = 44.1 bits (22), Expect = 0.019
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
|||||||| ||||||| |||||||||||| ||||
Sbjct: 391 tcctcgcactcatctaactccatgtctgttagct 358
>gb|CO165239.1|CO165239 FLD1_53_F10.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_53_F10_A029 3', mRNA sequence
Length = 869
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 484 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 425
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 424 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 372
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 220 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 161
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 160 ctctgaccattttgcattcccttctcaac 132
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 583 tcctcacactcatctaactccatgtctgttagct 550
>gb|CO165319.1|CO165319 FLD1_53_F10.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_53_F10_A029 5', mRNA sequence
Length = 836
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 730 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 671
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 670 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 611
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 610 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 551
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 550 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 491
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 490 ctgctaccacc 480
Score = 65.9 bits (33), Expect = 5e-009
Identities = 120/149 (80%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||| ||||||||| || | ||||||
Sbjct: 418 ccacccattccttctttgagtgcatcctccccgtactcatcataaatgtctcttttctca 359
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || |||
Sbjct: 358 ggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccc 299
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 298 ttgtccggatggtttttgatagcagcctt 270
>gb|CO165967.1|CO165967 FLD1_58_H07.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_58_H07_A029 3', mRNA sequence
Length = 772
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 377 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 318
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 317 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 265
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 113 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 54
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 53 ctctgaccattttgcattcccttctcaac 25
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 476 tcctcacactcatctaactccatgtctgttagct 443
>gb|CO172351.1|CO172351 NDL1_29_E03.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_29_E03_A029 3', mRNA sequence
Length = 723
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 336 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 277
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 276 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 224
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttc 949
||||||||||| |||||||| || || ||||||||||| |||||
Sbjct: 72 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttc 29
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 435 tcctcacactcatctaactccatgtctgttagct 402
>gb|CO172429.1|CO172429 NDL1_29_E03.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_29_E03_A029 5', mRNA sequence
Length = 750
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 358 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 299
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 298 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 239
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 238 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 179
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 178 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 119
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 118 ctgctaccacc 108
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 556 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 497
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 496 ctctgaccattttgcattcccttctcaac 468
Score = 44.1 bits (22), Expect = 0.019
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaa 1464
|||||||||||||| || || ||||| || || |||||||||||||
Sbjct: 46 ccacccattccttctttgagtgcatcctccccgtactgatcataaa 1
>gb|CO174494.1|CO174494 NDL1_44_H05.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_44_H05_A029 3', mRNA sequence
Length = 794
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 407 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 348
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 347 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 295
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 143 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 84
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 83 ctctgaccattttgcattcccttctcaac 55
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 506 tcctcacactcatctaactccatgtctgttagct 473
>gb|CO174583.1|CO174583 NDL1_44_H05.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_44_H05_A029 5', mRNA sequence
Length = 778
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 765 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 706
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 705 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 653
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 303 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 244
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 243 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 184
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 183 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 124
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 123 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 64
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 63 ctgctaccacc 53
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 501 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 442
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 441 ctctgaccattttgcattcccttctcaac 413
>gb|CO200960.1|CO200960 RTCNT2_2_E08.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_2_E08_A029 5', mRNA sequence
Length = 713
Score = 73.8 bits (37), Expect = 2e-011
Identities = 121/149 (81%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 522 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 463
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || |||
Sbjct: 462 ggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccc 403
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 402 ttgtccggatggtttttgatagcagcctt 374
Score = 48.1 bits (24), Expect = 0.001
Identities = 83/102 (81%), Gaps = 3/102 (2%)
Strand = Plus / Minus
Query: 1253 cttctttgagattccattgtaaagatcttccagagaaactttaagtgagtggactacatc 1312
||||||||| ||||||||||||| ||||||| || || || | | ||| || |||||
Sbjct: 685 cttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggtgaacaacatc 626
Query: 1313 ttctcccctcctttgccttc---ttcccctgctgcttccacc 1351
||| || ||||||||||||| ||||||||||||| |||||
Sbjct: 625 ttcgcctctcctttgccttcgggttcccctgctgctaccacc 584
>gb|CO362352.1|CO362352 RTK1_3_B12.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_3_B12_A029 3', mRNA sequence
Length = 674
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Plus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 345 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 404
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 405 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 464
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 465 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 524
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 525 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 584
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 585 ctgctaccacc 595
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 147 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 206
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 207 ctctgaccattttgcattcccttctcaac 235
>gb|CO364214.1|CO364214 RTK1_14_H10.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_14_H10_A029 3', mRNA sequence
Length = 702
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 213 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 154
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 153 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 101
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 312 tcctcacactcatctaactccatgtctgttagct 279
>gb|CO364302.1|CO364302 RTK1_14_H10.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_14_H10_A029 5', mRNA sequence
Length = 865
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 570 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 511
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 510 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 451
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 450 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 391
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 390 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 331
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 330 ctgctaccacc 320
Score = 73.8 bits (37), Expect = 2e-011
Identities = 121/149 (81%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 258 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 199
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || |||
Sbjct: 198 ggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccc 139
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 138 ttgtccggatggtttttgatagcagcctt 110
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 768 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 709
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 708 ctctgaccattttgcattcccttctcaac 680
>gb|CO364533.1|CO364533 RTK1_16_F09.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_16_F09_A029 3', mRNA sequence
Length = 833
Score = 73.8 bits (37), Expect = 2e-011
Identities = 121/149 (81%)
Strand = Plus / Plus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 519 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 578
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || |||
Sbjct: 579 ggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccc 638
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 639 ttgtccggatggtttttgatagcagcctt 667
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Plus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 207 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 266
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 267 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 326
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 327 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 386
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 387 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 446
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 447 ctgctaccacc 457
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 9 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 68
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 69 ctctgaccattttgcattcccttctcaac 97
>gb|CO364617.1|CO364617 RTK1_16_F09.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_16_F09_A029 5', mRNA sequence
Length = 795
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 587 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 646
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 647 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 699
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Plus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 488 tcctcacactcatctaactccatgtctgttagct 521
>gb|CO365638.1|CO365638 RTK1_18_G01.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_18_G01_A029 3', mRNA sequence
Length = 806
Score = 73.8 bits (37), Expect = 2e-011
Identities = 121/149 (81%)
Strand = Plus / Plus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 289 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 348
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || |||
Sbjct: 349 ggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccc 408
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 409 ttgtccggatggtttttgatagcagcctt 437
Score = 60.0 bits (30), Expect = 3e-007
Identities = 137/172 (79%), Gaps = 3/172 (1%)
Strand = Plus / Plus
Query: 1183 tcattgaagcaccagacttcgagcccttgcccttgcacttggagcagatgacattgcgcg 1242
|||||||||| |||||||| || || || |||||||| || ||||| | ||||| || |
Sbjct: 56 tcattgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgag 115
Query: 1243 aaagagagagcttctttgagattccattgtaaagatcttccagagaaactttaagtgagt 1302
| || || | ||||||||| ||||||||||||| ||||||| || || || | | ||
Sbjct: 116 atagtgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggt 175
Query: 1303 ggactacatcttctcccctcctttgccttc---ttcccctgctgcttccacc 1351
| || |||||||| || ||||||||||||| ||||||||||||| |||||
Sbjct: 176 gaacaacatcttcgcctctcctttgccttcgggttcccctgctgctaccacc 227
>gb|CO365720.1|CO365720 RTK1_18_G01.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_18_G01_A029 5', mRNA sequence
Length = 802
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 325 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 384
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 385 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 437
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 589 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 648
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 649 ctctgaccattttgcattcccttctcaac 677
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Plus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 226 tcctcacactcatctaactccatgtctgttagct 259
>gb|CO366239.1|CO366239 RTK1_26_E05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_26_E05_A029 5', mRNA sequence
Length = 844
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 494 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 435
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 434 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 382
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 230 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 171
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 170 ctctgaccattttgcattcccttctcaac 142
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 593 tcctcacactcatctaactccatgtctgttagct 560
Score = 36.2 bits (18), Expect = 4.6
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaagg 1129
|||||||||||||| ||||| |||||
Sbjct: 32 tgctgcatctgctggatcatcgaagg 7
>gb|CO366526.1|CO366526 RTK1_28_H11.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_28_H11_A029 3', mRNA sequence
Length = 859
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 484 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 425
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 424 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 372
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 220 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 161
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 160 ctctgaccattttgcattcccttctcaac 132
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 583 tcctcacactcatctaactccatgtctgttagct 550
>gb|CO366611.1|CO366611 RTK1_28_H11.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_28_H11_A029 5', mRNA sequence
Length = 782
Score = 73.8 bits (37), Expect = 2e-011
Identities = 121/149 (81%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 521 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 462
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || |||
Sbjct: 461 ggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccc 402
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 401 ttgtccggatggtttttgatagcagcctt 373
Score = 60.0 bits (30), Expect = 3e-007
Identities = 137/172 (79%), Gaps = 3/172 (1%)
Strand = Plus / Minus
Query: 1183 tcattgaagcaccagacttcgagcccttgcccttgcacttggagcagatgacattgcgcg 1242
|||||||||| |||||||| || || || |||||||| || ||||| | ||||| || |
Sbjct: 754 tcattgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgag 695
Query: 1243 aaagagagagcttctttgagattccattgtaaagatcttccagagaaactttaagtgagt 1302
| || || | ||||||||| ||||||||||||| ||||||| || || || | | ||
Sbjct: 694 atagtgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggt 635
Query: 1303 ggactacatcttctcccctcctttgccttc---ttcccctgctgcttccacc 1351
| || |||||||| || ||||||||||||| ||||||||||||| |||||
Sbjct: 634 gaacaacatcttcgcctctcctttgccttcgggttcccctgctgctaccacc 583
>gb|CO366806.1|CO366806 RTK1_30_F01.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_30_F01_A029 3', mRNA sequence
Length = 794
Score = 73.8 bits (37), Expect = 2e-011
Identities = 121/149 (81%)
Strand = Plus / Plus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 263 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 322
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || |||
Sbjct: 323 ggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccc 382
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 383 ttgtccggatggtttttgatagcagcctt 411
Score = 60.0 bits (30), Expect = 3e-007
Identities = 137/172 (79%), Gaps = 3/172 (1%)
Strand = Plus / Plus
Query: 1183 tcattgaagcaccagacttcgagcccttgcccttgcacttggagcagatgacattgcgcg 1242
|||||||||| |||||||| || || || |||||||| || ||||| | ||||| || |
Sbjct: 30 tcattgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgag 89
Query: 1243 aaagagagagcttctttgagattccattgtaaagatcttccagagaaactttaagtgagt 1302
| || || | ||||||||| ||||||||||||| ||||||| || || || | | ||
Sbjct: 90 atagtgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggt 149
Query: 1303 ggactacatcttctcccctcctttgccttc---ttcccctgctgcttccacc 1351
| || |||||||| || ||||||||||||| ||||||||||||| |||||
Sbjct: 150 gaacaacatcttcgcctctcctttgccttcgggttcccctgctgctaccacc 201
>gb|CO366880.1|CO366880 RTK1_30_F01.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_30_F01_A029 5', mRNA sequence
Length = 766
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 326 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 385
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 386 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 438
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 590 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 649
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 650 ctctgaccattttgcattcccttctcaac 678
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Plus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 227 tcctcacactcatctaactccatgtctgttagct 260
>gb|CO366945.1|CO366945 RTK1_31_E03.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_31_E03_A029 3', mRNA sequence
Length = 619
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 260 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 201
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 200 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 148
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 359 tcctcacactcatctaactccatgtctgttagct 326
>gb|CV032418.1|CV032418 RTNACL1_8_B01.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_8_B01_A029 3', mRNA sequence
Length = 642
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 272 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 213
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 212 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 160
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 371 tcctcacactcatctaactccatgtctgttagct 338
>gb|CV032482.1|CV032482 RTNACL1_8_B01.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_8_B01_A029 5', mRNA sequence
Length = 639
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 540 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 481
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 480 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 428
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 276 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 217
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 216 ctctgaccattttgcattcccttctcaac 188
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 639 tcctcacactcatctaactccatgtctgttagct 606
Score = 36.2 bits (18), Expect = 4.6
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaagg 1129
|||||||||||||| ||||| |||||
Sbjct: 78 tgctgcatctgctggatcatcgaagg 53
>gb|CV032615.1|CV032615 RTNACL1_17_G06.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_17_G06_A029 3', mRNA sequence
Length = 753
Score = 73.8 bits (37), Expect = 2e-011
Identities = 121/149 (81%)
Strand = Plus / Plus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 319 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 378
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || |||
Sbjct: 379 ggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccc 438
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 439 ttgtccggatggtttttgatagcagcctt 467
Score = 65.9 bits (33), Expect = 5e-009
Identities = 197/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Plus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 7 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 66
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 67 cgttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 126
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 127 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 186
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 187 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 246
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 247 ctgctaccacc 257
>gb|CV034642.1|CV034642 RTNACL1_10_C11.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_10_C11_A029 5', mRNA sequence
Length = 722
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 498 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 557
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 558 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 610
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Plus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 399 tcctcacactcatctaactccatgtctgttagct 432
>gb|CV035015.1|CV035015 RTNACL1_13_C12.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_13_C12_A029 3', mRNA sequence
Length = 838
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 444 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 385
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 384 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 332
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 180 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 121
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 120 ctctgaccattttgcattcccttctcaac 92
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 543 tcctcacactcatctaactccatgtctgttagct 510
>gb|CV036284.1|CV036284 RTNACL1_58_C04.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_58_C04_A029 3', mRNA sequence
Length = 699
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 312 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 253
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 252 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 200
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttc 949
||||||||||| |||||||| || || ||||||||||| |||||
Sbjct: 48 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttc 5
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 411 tcctcacactcatctaactccatgtctgttagct 378
>gb|CX713004.1|CX713004 RTPQ1_6_H02.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_6_H02_A032 3', mRNA sequence
Length = 657
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 346 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 287
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 286 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 234
Score = 40.1 bits (20), Expect = 0.30
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttc 949
||||||||||| |||||||| || || || |||||||| |||||
Sbjct: 82 aatacaatgtcaccagtaactgtgtcgggggcttcatctgcttc 39
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 445 tcctcacactcatctaactccatgtctgttagct 412
>gb|CX713080.1|CX713080 RTPQ1_6_H02.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_6_H02_A032 5', mRNA sequence
Length = 653
Score = 73.8 bits (37), Expect = 2e-011
Identities = 121/149 (81%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 397 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 338
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || |||
Sbjct: 337 ggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccc 278
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 277 ttgtccggatggtttttgatagcagcctt 249
Score = 60.0 bits (30), Expect = 3e-007
Identities = 137/172 (79%), Gaps = 3/172 (1%)
Strand = Plus / Minus
Query: 1183 tcattgaagcaccagacttcgagcccttgcccttgcacttggagcagatgacattgcgcg 1242
|||||||||| |||||||| || || || |||||||| || ||||| | ||||| || |
Sbjct: 630 tcattgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgag 571
Query: 1243 aaagagagagcttctttgagattccattgtaaagatcttccagagaaactttaagtgagt 1302
| || || | ||||||||| ||||||||||||| ||||||| || || || | | ||
Sbjct: 570 atagtgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggt 511
Query: 1303 ggactacatcttctcccctcctttgccttc---ttcccctgctgcttccacc 1351
| || |||||||| || ||||||||||||| ||||||||||||| |||||
Sbjct: 510 gaacaacatcttcgcctctcctttgccttcgggttcccctgctgctaccacc 459
>gb|CX713959.1|CX713959 RTPQ1_15_C12.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_15_C12_A032 5', mRNA sequence
Length = 772
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Plus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 403 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 462
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 463 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 522
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 523 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 582
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 583 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 642
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 643 ctgctaccacc 653
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 205 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 264
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 265 ctctgaccattttgcattcccttctcaac 293
Score = 46.1 bits (23), Expect = 0.005
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaat 1465
|||||||||||||| || || ||||| || || ||||||||||||||
Sbjct: 715 ccacccattccttctttgagtgcatcctccccgtactgatcataaat 761
>gb|CX714743.1|CX714743 RTPQ1_26_F01.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_26_F01_A032 3', mRNA sequence
Length = 662
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 275 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 216
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 215 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 163
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 374 tcctcacactcatctaactccatgtctgttagct 341
>gb|CX715196.1|CX715196 RTPQ1_32_H07.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_32_H07_A032 3', mRNA sequence
Length = 754
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 368 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 309
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 308 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 256
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 104 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 45
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 44 ctctgaccattttgcattcccttctcaac 16
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 467 tcctcacactcatctaactccatgtctgttagct 434
>gb|CX715248.1|CX715248 RTPQ1_32_H07.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_32_H07_A032 5', mRNA sequence
Length = 708
Score = 73.8 bits (37), Expect = 2e-011
Identities = 121/149 (81%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 397 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 338
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || |||
Sbjct: 337 ggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccc 278
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 277 ttgtccggatggtttttgatagcagcctt 249
Score = 63.9 bits (32), Expect = 2e-008
Identities = 196/250 (78%), Gaps = 3/250 (1%)
Strand = Plus / Minus
Query: 1105 gctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgagc 1164
||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || || |
Sbjct: 708 gctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagacc 649
Query: 1165 cctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttgg 1224
| ||||||||| ||| |||||||||| |||||||| || || || |||||||| || |
Sbjct: 648 cttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcatttag 589
Query: 1225 agcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcca 1284
|||| | ||||| || || | || | ||||||||| ||||||||||||| |||||||
Sbjct: 588 agcacagaacatttcgagataatgacaacttctttgatgttccattgtaaaggtcttcca 529
Query: 1285 gagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctgc 1341
|| || || | | ||| || |||||||| || ||||||||||||| |||||||||
Sbjct: 528 atgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctgc 469
Query: 1342 tgcttccacc 1351
|||| |||||
Sbjct: 468 tgctaccacc 459
>gb|DN626434.1|DN626434 EST977250 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAA242, mRNA sequence
Length = 783
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Plus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 438 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 497
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 498 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 557
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 558 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 617
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 618 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 677
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 678 ctgctaccacc 688
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 240 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 299
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 300 ctctgaccattttgcattcccttctcaac 328
Score = 48.1 bits (24), Expect = 0.001
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 675 cccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttgaattgg 734
||||||||||| |||| |||||||| ||||| || ||||| || || |||||||| ||
Sbjct: 9 cccttcatgaatggccgctggtaaacaggcattccttcatcattaatagccttgaactga 68
Query: 735 tcaggtttaacaacttcacc 754
| || ||||||||||||||
Sbjct: 69 cctggcttaacaacttcacc 88
>gb|DN627012.1|DN627012 EST977828 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAAC96, mRNA sequence
Length = 686
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 202 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 261
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 262 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 314
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 466 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 525
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 526 ctctgaccattttgcattcccttctcaac 554
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Plus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 103 tcctcacactcatctaactccatgtctgttagct 136
>gb|DN627235.1|DN627235 EST978051 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAAG33, mRNA sequence
Length = 770
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 346 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 287
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 286 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 227
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 226 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 167
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 166 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 107
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 106 ctgctaccacc 96
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 544 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 485
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 484 ctctgaccattttgcattcccttctcaac 456
Score = 38.2 bits (19), Expect = 1.2
Identities = 61/75 (81%)
Strand = Plus / Minus
Query: 680 catgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttgaattggtcagg 739
|||||| |||| |||||||| ||||| || ||||| || || |||||||| || | ||
Sbjct: 770 catgaatggccgctggtaaacaggcattccttcatcattaatagccttgaactgacctgg 711
Query: 740 tttaacaacttcacc 754
||||||||||||||
Sbjct: 710 cttaacaacttcacc 696
>gb|DN627586.1|DN627586 EST978402 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAAM34, mRNA sequence
Length = 917
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 202 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 261
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 262 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 314
Score = 71.9 bits (36), Expect = 8e-011
Identities = 199/251 (79%), Gaps = 3/251 (1%)
Strand = Plus / Plus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 664 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 723
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 724 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 783
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 784 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 843
Query: 1284 agaga-aactttaagtgagtggactacatcttctcccctcctttgccttc--ttcccctg 1340
| || | |||| | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 844 aatgatacctttcaacgggtgaacaacatcttcgcctctcctttgccttcggttcccctg 903
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 904 ctgctaccacc 914
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 466 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 525
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 526 ctctgaccattttgcattcccttctcaac 554
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Plus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 103 tcctcacactcatctaactccatgtctgttagct 136
>gb|DN629372.1|DN629372 EST980188 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTABD75, mRNA sequence
Length = 898
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 202 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 261
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 262 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 314
Score = 58.0 bits (29), Expect = 1e-006
Identities = 143/181 (79%)
Strand = Plus / Plus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 664 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 723
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 724 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 783
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| |||||||||||| ||||||
Sbjct: 784 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaacgtcttcc 843
Query: 1284 a 1284
|
Sbjct: 844 a 844
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 466 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 525
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 526 ctctgaccattttgcattcccttctcaac 554
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Plus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 103 tcctcacactcatctaactccatgtctgttagct 136
>gb|DN629853.1|DN629853 EST980669 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTABL35, mRNA sequence
Length = 783
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Plus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 438 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 497
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 498 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 557
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 558 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 617
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 618 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 677
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 678 ctgctaccacc 688
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 240 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 299
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 300 ctctgaccattttgcattcccttctcaac 328
Score = 48.1 bits (24), Expect = 0.001
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 675 cccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttgaattgg 734
||||||||||| |||| |||||||| ||||| || ||||| || || |||||||| ||
Sbjct: 9 cccttcatgaatggccgctggtaaacaggcattccttcatcattaatagccttgaactga 68
Query: 735 tcaggtttaacaacttcacc 754
| || ||||||||||||||
Sbjct: 69 cctggcttaacaacttcacc 88
>gb|DN629909.1|DN629909 EST980725 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTABM22, mRNA sequence
Length = 862
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 808 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 749
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 748 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 696
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 346 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 287
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 286 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 227
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 226 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 167
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 166 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 107
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 106 ctgctaccacc 96
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 544 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 485
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 484 ctctgaccattttgcattcccttctcaac 456
>gb|DN630200.1|DN630200 EST981016 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTABQ65, mRNA sequence
Length = 769
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 346 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 287
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 286 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 227
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 226 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 167
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 166 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 107
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 106 ctgctaccacc 96
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 544 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 485
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 484 ctctgaccattttgcattcccttctcaac 456
Score = 36.2 bits (18), Expect = 4.6
Identities = 60/74 (81%)
Strand = Plus / Minus
Query: 681 atgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggt 740
||||| |||| |||||||| ||||| || ||||| || || |||||||| || | ||
Sbjct: 769 atgaatggccgctggtaaacaggcattccttcatcattaatagccttgaactgacctggc 710
Query: 741 ttaacaacttcacc 754
||||||||||||||
Sbjct: 709 ttaacaacttcacc 696
>gb|DN631439.1|DN631439 EST982255 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAC965, mRNA sequence
Length = 769
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 346 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 287
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 286 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 227
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 226 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 167
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 166 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 107
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 106 ctgctaccacc 96
Score = 56.0 bits (28), Expect = 5e-006
Identities = 112/140 (80%)
Strand = Plus / Minus
Query: 855 agatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaatg 914
||||| || |||||||| ||||| |||| || ||||| ||||| | || |||||||||
Sbjct: 595 agatcgtctccctttctcttgaatttgggatgctccttttgctgaaccacaaatacaatg 536
Query: 915 tctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctggctg 974
|| |||||||| | || ||||||||||| ||||| || ||| |||||| |||| |
Sbjct: 535 tcaccagtaactgcgtcgggcgcttcatctgcttccccttcgaaagtgatcctctgacca 476
Query: 975 tgttgcattcccttctcaac 994
| ||||||||||||||||||
Sbjct: 475 ttttgcattcccttctcaac 456
Score = 36.2 bits (18), Expect = 4.6
Identities = 60/74 (81%)
Strand = Plus / Minus
Query: 681 atgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttgaattggtcaggt 740
||||| |||| |||||||| ||||| || ||||| || || |||||||| || | ||
Sbjct: 769 atgaatggccgctggtaaacaggcattccttcatcattaatagccttgaactgacctggc 710
Query: 741 ttaacaacttcacc 754
||||||||||||||
Sbjct: 709 ttaacaacttcacc 696
>gb|DN631879.1|DN631879 EST982695 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTACG58, mRNA sequence
Length = 782
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 346 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 287
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 286 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 227
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 226 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 167
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 166 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 107
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 106 ctgctaccacc 96
Score = 50.1 bits (25), Expect = 3e-004
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||| | |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 544 aatacaatgccaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 485
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 484 ctctgaccattttgcattcccttctcaac 456
Score = 48.1 bits (24), Expect = 0.001
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 675 cccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttgaattgg 734
||||||||||| |||| |||||||| ||||| || ||||| || || |||||||| ||
Sbjct: 777 cccttcatgaatggccgctggtaaacaggcattccttcatcattaatagccttgaactga 718
Query: 735 tcaggtttaacaacttcacc 754
| || ||||||||||||||
Sbjct: 717 cctggcttaacaacttcacc 698
>gb|DN632035.1|DN632035 EST982851 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTACI71, mRNA sequence
Length = 783
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Plus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 438 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 497
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 498 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 557
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 558 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 617
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 618 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 677
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 678 ctgctaccacc 688
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 240 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 299
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 300 ctctgaccattttgcattcccttctcaac 328
Score = 48.1 bits (24), Expect = 0.001
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 675 cccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttgaattgg 734
||||||||||| |||| |||||||| ||||| || ||||| || || |||||||| ||
Sbjct: 9 cccttcatgaatggccgctggtaaacaggcattccttcatcattaatagccttgaactga 68
Query: 735 tcaggtttaacaacttcacc 754
| || ||||||||||||||
Sbjct: 69 cctggcttaacaacttcacc 88
>gb|DN632324.1|DN632324 EST983140 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTACN22, mRNA sequence
Length = 823
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 346 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 287
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 286 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 227
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 226 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 167
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 166 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 107
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 106 ctgctaccacc 96
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 544 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 485
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 484 ctctgaccattttgcattcccttctcaac 456
Score = 52.0 bits (26), Expect = 8e-005
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaa 699
|||||||| || | ||||||||||||||| || ||||||||||| |||| | ||||||
Sbjct: 807 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgccggtaaa 750
>gb|DN632951.1|DN632951 EST983767 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTACX65, mRNA sequence
Length = 891
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 202 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 261
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 262 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 314
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 466 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 525
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 526 ctctgaccattttgcattcccttctcaac 554
Score = 52.0 bits (26), Expect = 8e-005
Identities = 83/102 (81%)
Strand = Plus / Plus
Query: 1183 tcattgaagcaccagacttcgagcccttgcccttgcacttggagcagatgacattgcgcg 1242
|||||||||| |||||||| || || || |||||||| || ||||| | ||||| || |
Sbjct: 743 tcattgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgag 802
Query: 1243 aaagagagagcttctttgagattccattgtaaagatcttcca 1284
| || || | ||||||||| ||||||||||||| |||||||
Sbjct: 803 atagtgacaacttctttgatgttccattgtaaaggtcttcca 844
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Plus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 103 tcctcacactcatctaactccatgtctgttagct 136
>gb|DN633318.1|DN633318 EST984134 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAD333, mRNA sequence
Length = 771
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 346 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 287
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 286 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 227
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 226 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 167
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 166 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 107
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 106 ctgctaccacc 96
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 544 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 485
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 484 ctctgaccattttgcattcccttctcaac 456
Score = 40.1 bits (20), Expect = 0.30
Identities = 62/76 (81%)
Strand = Plus / Minus
Query: 679 tcatgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttgaattggtcag 738
||||||| |||| |||||||| ||||| || ||||| || || |||||||| || | |
Sbjct: 771 tcatgaatggccgctggtaaacaggcattccttcatcattaatagccttgaactgacctg 712
Query: 739 gtttaacaacttcacc 754
| ||||||||||||||
Sbjct: 711 gcttaacaacttcacc 696
>gb|DN633510.1|DN633510 EST984326 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTAD752, mRNA sequence
Length = 837
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 144 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 203
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 204 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 256
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 408 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 467
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 468 ctctgaccattttgcattcccttctcaac 496
Score = 52.0 bits (26), Expect = 8e-005
Identities = 144/182 (79%), Gaps = 1/182 (0%)
Strand = Plus / Plus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 606 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 665
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 666 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 725
Query: 1224 gagcagatgacattgcgcgaaagagagagc-ttctttgagattccattgtaaagatcttc 1282
||||| | ||||| || || || || | | |||||||| ||||||||||||| |||||
Sbjct: 726 gagcacagaacatttcgagatagtgacaactttctttgatgttccattgtaaaggtcttc 785
Query: 1283 ca 1284
||
Sbjct: 786 ca 787
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Plus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 45 tcctcacactcatctaactccatgtctgttagct 78
>gb|DN633945.1|DN633945 EST984761 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTADE53, mRNA sequence
Length = 767
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 346 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 287
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 286 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 227
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 226 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 167
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 166 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 107
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 106 ctgctaccacc 96
Score = 50.1 bits (25), Expect = 3e-004
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 544 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 485
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | |||||||||||||||||
Sbjct: 484 ctctgaccattctgcattcccttctcaac 456
>gb|DN634184.1|DN634184 EST985000 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTADI31, mRNA sequence
Length = 771
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 346 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 287
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 286 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 227
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 226 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 167
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 166 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 107
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 106 ctgctaccacc 96
Score = 50.1 bits (25), Expect = 3e-004
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 544 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 485
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | |||||||||||||||||
Sbjct: 484 ctctgaccattctgcattcccttctcaac 456
Score = 40.1 bits (20), Expect = 0.30
Identities = 62/76 (81%)
Strand = Plus / Minus
Query: 679 tcatgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttgaattggtcag 738
||||||| |||| |||||||| ||||| || ||||| || || |||||||| || | |
Sbjct: 771 tcatgaatggccgctggtaaacaggcattccttcatcattaatagccttgaactgacctg 712
Query: 739 gtttaacaacttcacc 754
| ||||||||||||||
Sbjct: 711 gcttaacaacttcacc 696
>gb|DR014382.1|DR014382 HEAT1_49_D08.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_49_D08_A029 3', mRNA sequence
Length = 870
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 484 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 425
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 424 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 372
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 220 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 161
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 160 ctctgaccattttgcattcccttctcaac 132
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 583 tcctcacactcatctaactccatgtctgttagct 550
>gb|DR014461.1|DR014461 HEAT1_49_D08.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_49_D08_A029 5', mRNA sequence
Length = 890
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 558 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 499
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 498 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 446
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 294 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 235
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 234 ctctgaccattttgcattcccttctcaac 206
Score = 40.1 bits (20), Expect = 0.30
Identities = 77/96 (80%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 96 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 37
Query: 1164 ccctggcacccagggcacctcattgaagcaccagac 1199
|| ||||||||| ||| |||||||||| ||||||
Sbjct: 36 ccttggcacccattgcatttcattgaagcgccagac 1
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 657 tcctcacactcatctaactccatgtctgttagct 624
>gb|DR014726.1|DR014726 HEAT1_51_F07.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_51_F07_A029 3', mRNA sequence
Length = 865
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 251 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 310
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 311 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 363
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 515 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 574
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 575 ctctgaccattttgcattcccttctcaac 603
Score = 50.1 bits (25), Expect = 3e-004
Identities = 100/125 (80%)
Strand = Plus / Plus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 713 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 772
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 773 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 832
Query: 1224 gagca 1228
|||||
Sbjct: 833 gagca 837
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Plus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 152 tcctcacactcatctaactccatgtctgttagct 185
>gb|DR014810.1|DR014810 HEAT1_51_F07.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_51_F07_A029 5', mRNA sequence
Length = 897
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 353 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 412
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 413 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 465
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 617 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 676
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 677 ctctgaccattttgcattcccttctcaac 705
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Plus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 254 tcctcacactcatctaactccatgtctgttagct 287
>gb|DR048804.1|DR048804 RTBOR1_11_H04.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_11_H04_A029 3', mRNA sequence
Length = 834
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 262 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 321
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 322 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 374
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 526 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 585
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 586 ctctgaccattttgcattcccttctcaac 614
Score = 36.2 bits (18), Expect = 4.6
Identities = 24/26 (92%)
Strand = Plus / Plus
Query: 1104 tgctgcatctgctgtatcatggaagg 1129
|||||||||||||| ||||| |||||
Sbjct: 724 tgctgcatctgctggatcatcgaagg 749
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Plus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 163 tcctcacactcatctaactccatgtctgttagct 196
>gb|DR048894.1|DR048894 RTBOR1_12_A06.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_12_A06_A029 3', mRNA sequence
Length = 831
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 446 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 387
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 386 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 334
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 182 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 123
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 122 ctctgaccattttgcattcccttctcaac 94
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 545 tcctcacactcatctaactccatgtctgttagct 512
>gb|DR048975.1|DR048975 RTBOR1_12_A06.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_12_A06_A029 5', mRNA sequence
Length = 806
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 784 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 725
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 724 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 665
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 664 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 605
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 604 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 545
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 544 ctgctaccacc 534
Score = 73.8 bits (37), Expect = 2e-011
Identities = 121/149 (81%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 472 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 413
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || |||
Sbjct: 412 ggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccc 353
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 352 ttgtccggatggtttttgatagcagcctt 324
>gb|DR049935.1|DR049935 RTBOR1_20_C11.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_20_C11_A029 3', mRNA sequence
Length = 426
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 67 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 126
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 127 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 179
Score = 50.1 bits (25), Expect = 3e-004
Identities = 74/89 (83%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 331 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 390
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 391 ctctgaccat-ttgcattcccttctcaac 418
>gb|DR060019.1|DR060019 RTNIT1_25_E05.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_25_E05_A029 3', mRNA sequence
Length = 754
Score = 73.8 bits (37), Expect = 2e-011
Identities = 121/149 (81%)
Strand = Plus / Plus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 327 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 386
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || |||
Sbjct: 387 ggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccc 446
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 447 ttgtccggatggtttttgatagcagcctt 475
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Plus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 15 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 74
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 75 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 134
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 135 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 194
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 195 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 254
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 255 ctgctaccacc 265
>gb|DR060098.1|DR060098 RTNIT1_25_E05.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_25_E05_A029 5', mRNA sequence
Length = 697
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 318 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 377
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 378 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 430
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 582 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 641
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 642 ctctgaccattttgcattcccttctcaac 670
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Plus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 219 tcctcacactcatctaactccatgtctgttagct 252
>gb|DR079275.1|DR079275 RTFEPL1_10_F02.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_10_F02_A029 3', mRNA sequence
Length = 847
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 740 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 681
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 680 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 621
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 620 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 561
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 560 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 501
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 500 ctgctaccacc 490
Score = 73.8 bits (37), Expect = 2e-011
Identities = 121/149 (81%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 428 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 369
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || |||
Sbjct: 368 ggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccc 309
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 308 ttgtccggatggtttttgatagcagcctt 280
>gb|DR089187.1|DR089187 RTAL1_7_C08.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_7_C08_A029 3', mRNA sequence
Length = 800
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 242 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 183
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 182 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 130
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 341 tcctcacactcatctaactccatgtctgttagct 308
>gb|DR089261.1|DR089261 RTAL1_7_C08.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_7_C08_A029 5', mRNA sequence
Length = 657
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 275 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 216
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 215 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 163
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 374 tcctcacactcatctaactccatgtctgttagct 341
>gb|DR109755.1|DR109755 RTS1_4_B05.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_4_B05_A029 5', mRNA sequence
Length = 755
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 379 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 320
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 319 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 260
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 259 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 200
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 199 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 140
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 139 ctgctaccacc 129
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 577 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 518
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 517 ctctgaccattttgcattcccttctcaac 489
Score = 54.0 bits (27), Expect = 2e-005
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 67 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 8
Query: 1479 ggatcac 1485
|||||||
Sbjct: 7 ggatcac 1
>gb|DR116528.1|DR116528 RTMG1_1_C01.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_1_C01_A029 3', mRNA sequence
Length = 751
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 374 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 315
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 314 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 262
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 110 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 51
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 50 ctctgaccattttgcattcccttctcaac 22
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 473 tcctcacactcatctaactccatgtctgttagct 440
>gb|DR116882.1|DR116882 RTMG1_3_H01.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_3_H01_A029 3', mRNA sequence
Length = 700
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 320 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 261
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 260 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 208
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttc 949
||||||||||| |||||||| || || ||||||||||| |||||
Sbjct: 56 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttc 13
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 419 tcctcacactcatctaactccatgtctgttagct 386
>gb|DR117184.1|DR117184 RTMG1_5_G03.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_5_G03_A029 3', mRNA sequence
Length = 896
Score = 73.8 bits (37), Expect = 2e-011
Identities = 121/149 (81%)
Strand = Plus / Plus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 543 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 602
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || |||
Sbjct: 603 ggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccc 662
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 663 ttgtccggatggtttttgatagcagcctt 691
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Plus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 231 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 290
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 291 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 350
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 351 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 410
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 411 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 470
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 471 ctgctaccacc 481
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 33 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 92
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 93 ctctgaccattttgcattcccttctcaac 121
>gb|DR117253.1|DR117253 RTMG1_5_G03.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_5_G03_A029 5', mRNA sequence
Length = 919
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 379 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 438
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 439 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 491
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 643 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 702
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 703 ctctgaccattttgcattcccttctcaac 731
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Plus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 280 tcctcacactcatctaactccatgtctgttagct 313
>gb|DR118098.1|DR118098 RTMG1_11_D01.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_11_D01_A029 3', mRNA sequence
Length = 861
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 484 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 425
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 424 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 372
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 220 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 161
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 160 ctctgaccattttgcattcccttctcaac 132
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 583 tcctcacactcatctaactccatgtctgttagct 550
>gb|DR119412.1|DR119412 RTMG1_23_C12.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_23_C12_A029 3', mRNA sequence
Length = 740
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 352 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 293
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 292 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 240
Score = 56.0 bits (28), Expect = 5e-006
Identities = 73/88 (82%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 88 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 29
Query: 966 ttctggctgtgttgcattcccttctcaa 993
|||| | | |||||||||||||||||
Sbjct: 28 ctctgaccattttgcattcccttctcaa 1
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 451 tcctcacactcatctaactccatgtctgttagct 418
>gb|DR119493.1|DR119493 RTMG1_23_C12.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_23_C12_A029 5', mRNA sequence
Length = 896
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 534 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 475
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 474 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 422
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 270 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 211
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 210 ctctgaccattttgcattcccttctcaac 182
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 633 tcctcacactcatctaactccatgtctgttagct 600
Score = 36.2 bits (18), Expect = 4.6
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaagg 1129
|||||||||||||| ||||| |||||
Sbjct: 72 tgctgcatctgctggatcatcgaagg 47
>gb|DR119658.1|DR119658 RTMG1_24_D08.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_24_D08_A029 5', mRNA sequence
Length = 667
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 649 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 590
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 589 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 537
Score = 65.9 bits (33), Expect = 5e-009
Identities = 144/181 (79%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 187 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 128
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 127 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 68
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 67 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 8
Query: 1284 a 1284
|
Sbjct: 7 a 7
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 385 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 326
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 325 ctctgaccattttgcattcccttctcaac 297
>gb|DR120523.1|DR120523 RTMG1_30_F12.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_30_F12_A029 3', mRNA sequence
Length = 808
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 423 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 364
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 363 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 311
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 159 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 100
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 99 ctctgaccattttgcattcccttctcaac 71
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 522 tcctcacactcatctaactccatgtctgttagct 489
>gb|DR120647.1|DR120647 RTMG1_31_C05.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_31_C05_A029 3', mRNA sequence
Length = 739
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 352 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 293
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 292 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 240
Score = 56.0 bits (28), Expect = 5e-006
Identities = 73/88 (82%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 88 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 29
Query: 966 ttctggctgtgttgcattcccttctcaa 993
|||| | | |||||||||||||||||
Sbjct: 28 ctctgaccattttgcattcccttctcaa 1
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 451 tcctcacactcatctaactccatgtctgttagct 418
>gb|DR120732.1|DR120732 RTMG1_31_C05.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_31_C05_A029 5', mRNA sequence
Length = 790
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 701 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 642
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 641 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 589
Score = 65.9 bits (33), Expect = 5e-009
Identities = 144/181 (79%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 239 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 180
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 179 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 120
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 119 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 60
Query: 1284 a 1284
|
Sbjct: 59 a 59
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 437 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 378
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 377 ctctgaccattttgcattcccttctcaac 349
>gb|DR160254.1|DR160254 RTFE1_5_A04.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_5_A04_A029 3', mRNA sequence
Length = 869
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 329 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 388
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 389 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 441
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 593 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 652
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 653 ctctgaccattttgcattcccttctcaac 681
Score = 36.2 bits (18), Expect = 4.6
Identities = 24/26 (92%)
Strand = Plus / Plus
Query: 1104 tgctgcatctgctgtatcatggaagg 1129
|||||||||||||| ||||| |||||
Sbjct: 791 tgctgcatctgctggatcatcgaagg 816
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Plus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 230 tcctcacactcatctaactccatgtctgttagct 263
>gb|DR160339.1|DR160339 RTFE1_5_A04.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_5_A04_A029 5', mRNA sequence
Length = 829
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 518 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 577
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 578 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 630
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttc 949
||||||||||| |||||||| || || ||||||||||| |||||
Sbjct: 782 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttc 825
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Plus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 419 tcctcacactcatctaactccatgtctgttagct 452
>gb|DR161623.1|DR161623 RTFE1_12_H10.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_12_H10_A029 5', mRNA sequence
Length = 570
Score = 73.8 bits (37), Expect = 2e-011
Identities = 121/149 (81%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 497 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 438
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || |||
Sbjct: 437 ggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccc 378
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 377 ttgtccggatggtttttgatagcagcctt 349
>gb|DR161713.1|DR161713 RTFE1_13_B03.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_13_B03_A029 5', mRNA sequence
Length = 475
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 328 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 387
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 388 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 440
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Plus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 229 tcctcacactcatctaactccatgtctgttagct 262
>gb|DR161800.1|DR161800 RTFE1_14_B03.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_14_B03_A029 3', mRNA sequence
Length = 538
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Plus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 225 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 284
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 285 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 344
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 345 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 404
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 405 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 464
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 465 ctgctaccacc 475
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 27 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 86
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 87 ctctgaccattttgcattcccttctcaac 115
>gb|DR161884.1|DR161884 RTFE1_14_B03.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_14_B03_A029 5', mRNA sequence
Length = 578
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 327 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 386
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 387 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 439
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Plus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 228 tcctcacactcatctaactccatgtctgttagct 261
>gb|DR164012.1|DR164012 RTFE1_46_G06.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_46_G06_A029 3', mRNA sequence
Length = 941
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 427 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 368
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 367 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 315
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 163 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 104
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 103 ctctgaccattttgcattcccttctcaac 75
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 526 tcctcacactcatctaactccatgtctgttagct 493
>gb|DR164102.1|DR164102 RTFE1_46_G06.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_46_G06_A029 5', mRNA sequence
Length = 893
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 449 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 390
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 389 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 337
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 185 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 126
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 125 ctctgaccattttgcattcccttctcaac 97
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 548 tcctcacactcatctaactccatgtctgttagct 515
>gb|DR167506.1|DR167506 RTPHOS1_19_F09.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_19_F09_A029 3', mRNA sequence
Length = 886
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 435 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 376
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 375 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 323
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 171 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 112
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 111 ctctgaccattttgcattcccttctcaac 83
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 534 tcctcacactcatctaactccatgtctgttagct 501
>gb|DR167936.1|DR167936 RTPHOS1_22_C09.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_22_C09_A029 3', mRNA sequence
Length = 602
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 228 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 169
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 168 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 116
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 327 tcctcacactcatctaactccatgtctgttagct 294
>gb|DR168806.1|DR168806 RTPHOS1_28_A08.b1_A029 Roots minus phosphorous Pinus taeda cDNA clone
RTPHOS1_28_A08_A029 3', mRNA sequence
Length = 784
Score = 73.8 bits (37), Expect = 2e-011
Identities = 121/149 (81%)
Strand = Plus / Plus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 264 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 323
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || |||
Sbjct: 324 ggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccc 383
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 384 ttgtccggatggtttttgatagcagcctt 412
Score = 60.0 bits (30), Expect = 3e-007
Identities = 137/172 (79%), Gaps = 3/172 (1%)
Strand = Plus / Plus
Query: 1183 tcattgaagcaccagacttcgagcccttgcccttgcacttggagcagatgacattgcgcg 1242
|||||||||| |||||||| || || || |||||||| || ||||| | ||||| || |
Sbjct: 31 tcattgaagcgccagactttgaccctttccccttgcatttagagcacagaacatttcgag 90
Query: 1243 aaagagagagcttctttgagattccattgtaaagatcttccagagaaactttaagtgagt 1302
| || || | ||||||||| ||||||||||||| ||||||| || || || | | ||
Sbjct: 91 atagtgacaacttctttgatgttccattgtaaaggtcttccaatgataccttcaacgggt 150
Query: 1303 ggactacatcttctcccctcctttgccttc---ttcccctgctgcttccacc 1351
| || |||||||| || ||||||||||||| ||||||||||||| |||||
Sbjct: 151 gaacaacatcttcgcctctcctttgccttcgggttcccctgctgctaccacc 202
>gb|DR168878.1|DR168878 RTPHOS1_28_A08.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_28_A08_A029 5', mRNA sequence
Length = 691
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 331 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 390
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 391 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 443
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 595 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 654
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 655 ctctgaccattttgcattcccttctcaac 683
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Plus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 232 tcctcacactcatctaactccatgtctgttagct 265
>gb|DR177087.1|DR177087 RTMNUT1_3_B06.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_3_B06_A029 3', mRNA sequence
Length = 725
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 267 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 208
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 207 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 155
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 366 tcctcacactcatctaactccatgtctgttagct 333
>gb|DR177160.1|DR177160 RTMNUT1_3_B06.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_3_B06_A029 5', mRNA sequence
Length = 693
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 302 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 243
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 242 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 183
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 182 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 123
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 122 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 63
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 62 ctgctaccacc 52
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 500 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 441
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 440 ctctgaccattttgcattcccttctcaac 412
>gb|DR177206.1|DR177206 RTMNUT1_3_G04.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_3_G04_A029 5', mRNA sequence
Length = 773
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Plus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 565 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 624
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 625 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 677
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Plus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 466 tcctcacactcatctaactccatgtctgttagct 499
>gb|DR179639.1|DR179639 RTMNUT1_23_H08.b2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_23_H08_A029 3', mRNA sequence
Length = 762
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 367 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 308
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 307 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 255
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 103 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 44
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 43 ctctgaccattttgcattcccttctcaac 15
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 466 tcctcacactcatctaactccatgtctgttagct 433
>gb|DR181777.1|DR181777 RTMNUT1_41_A08.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_41_A08_A029 3', mRNA sequence
Length = 762
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 407 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 348
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 347 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 295
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 143 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 84
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 83 ctctgaccattttgcattcccttctcaac 55
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 506 tcctcacactcatctaactccatgtctgttagct 473
>gb|DR181859.1|DR181859 RTMNUT1_41_A08.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_41_A08_A029 5', mRNA sequence
Length = 739
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 593 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 534
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 533 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 481
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 329 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 270
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 269 ctctgaccattttgcattcccttctcaac 241
Score = 50.1 bits (25), Expect = 3e-004
Identities = 100/125 (80%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 131 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 72
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 71 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 12
Query: 1224 gagca 1228
|||||
Sbjct: 11 gagca 7
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 692 tcctcacactcatctaactccatgtctgttagct 659
>gb|DR386746.1|DR386746 RTHG1_17_E09.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_17_E09_A029 3', mRNA sequence
Length = 814
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 444 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 385
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 384 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 332
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 180 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 121
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 120 ctctgaccattttgcattcccttctcaac 92
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 543 tcctcacactcatctaactccatgtctgttagct 510
>gb|DR387999.1|DR387999 RTHG1_25_C04.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_25_C04_A029 5', mRNA sequence
Length = 734
Score = 73.8 bits (37), Expect = 2e-011
Identities = 67/77 (87%)
Strand = Plus / Minus
Query: 1413 ccaccaccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgt 1472
||||| || |||||||| || || ||||||||||| |||||||||||||| ||||| | |
Sbjct: 81 ccacctcctcccattccctctttcagggcatcttctccatactgatcatatatctccctt 22
Query: 1473 ttctctggatcactcaa 1489
|| ||||||||||||||
Sbjct: 21 ttttctggatcactcaa 5
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 650 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 591
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 590 tgtccccagttacagtgtccggcgcttcatcagcttcacc 551
>gb|DR388505.1|DR388505 RTHG1_28_E04.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_28_E04_A029 5', mRNA sequence
Length = 781
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 641 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 582
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 581 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 529
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 377 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 318
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 317 ctctgaccattttgcattcccttctcaac 289
Score = 50.1 bits (25), Expect = 3e-004
Identities = 100/125 (80%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 179 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 120
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 119 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 60
Query: 1224 gagca 1228
|||||
Sbjct: 59 gagca 55
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 740 tcctcacactcatctaactccatgtctgttagct 707
>gb|DR388710.1|DR388710 RTHG1_30_B09.b1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_30_B09_A029 3', mRNA sequence
Length = 799
Score = 73.8 bits (37), Expect = 2e-011
Identities = 121/149 (81%)
Strand = Plus / Plus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 539 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 598
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || |||
Sbjct: 599 ggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccc 658
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 659 ttgtccggatggtttttgatagcagcctt 687
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Plus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 227 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 286
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 287 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 346
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 347 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 406
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 407 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 466
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 467 ctgctaccacc 477
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 29 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 88
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 89 ctctgaccattttgcattcccttctcaac 117
>gb|DR682449.1|DR682449 EST1072524 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA990 3' end, mRNA sequence
Length = 791
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 539 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 480
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 479 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 420
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 419 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 360
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 359 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 300
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 299 ctgctaccacc 289
Score = 65.9 bits (33), Expect = 5e-009
Identities = 120/149 (80%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 227 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 168
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || |||| ||||| || || || || |||
Sbjct: 167 ggatcactaagtacctcgtaggcctgagcaagttcctcaaacttttctggatctccaccc 108
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 107 ttgtccggatggtttttgatagcagcctt 79
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 737 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 678
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 677 ctctgaccattttgcattcccttctcaac 649
>gb|DR688764.1|DR688764 EST1078849 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACA31 3' end, mRNA sequence
Length = 662
Score = 73.8 bits (37), Expect = 2e-011
Identities = 198/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 648 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 589
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 588 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 529
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 528 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 469
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 468 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 409
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 408 ctgctaccacc 398
Score = 73.8 bits (37), Expect = 2e-011
Identities = 121/149 (81%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 336 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 277
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || |||
Sbjct: 276 ggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccc 217
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 216 ttgtccggatggtttttgatagcagcctt 188
>gb|DR695054.1|DR695054 EST1085147 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAEJ90 3' end, mRNA sequence
Length = 814
Score = 73.8 bits (37), Expect = 2e-011
Identities = 121/149 (81%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 445 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 386
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || |||
Sbjct: 385 ggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccc 326
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 325 ttgtccggatggtttttgatagcagcctt 297
Score = 65.9 bits (33), Expect = 5e-009
Identities = 198/251 (78%), Gaps = 4/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||||| ||| || ||
Sbjct: 756 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagactt-catgccagac 698
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 697 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 638
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 637 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 578
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 577 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 518
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 517 ctgctaccacc 507
>gb|DR742143.1|DR742143 RTCU1_2_B07.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_2_B07_A029 3', mRNA sequence
Length = 689
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 308 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 249
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 248 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 196
Score = 46.1 bits (23), Expect = 0.005
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagctt 948
||||||||||| |||||||| || || ||||||||||| ||||
Sbjct: 43 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgctt 1
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 407 tcctcacactcatctaactccatgtctgttagct 374
>gb|DR742208.1|DR742208 RTCU1_2_B07.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_2_B07_A029 5', mRNA sequence
Length = 833
Score = 73.8 bits (37), Expect = 2e-011
Identities = 94/113 (83%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 449 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 390
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 389 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 337
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 185 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 126
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 125 ctctgaccattttgcattcccttctcaac 97
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 548 tcctcacactcatctaactccatgtctgttagct 515
>gb|BM367324.1|BM367324 NXLV_047_G03_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_047_G03 5' similar to Arabidopsis thaliana
sequence At3g44110 dnaJ protein homolog atj3 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 399
Score = 71.9 bits (36), Expect = 8e-011
Identities = 144/180 (80%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 188 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 129
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 128 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 69
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||||||||||
Sbjct: 68 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaagatcttcc 9
>gb|DR168006.1|DR168006 RTPHOS1_22_C09.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_22_C09_A029 5', mRNA sequence
Length = 696
Score = 69.9 bits (35), Expect = 3e-010
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 656 gaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatcggcatcccctcatc 715
||||||||||||||| || ||||||||||| |||| |||||||| ||||| || |||||
Sbjct: 691 gaaatgaatgtacagattacccttcatgaatggccgctggtaaacaggcattccttcatc 632
Query: 716 gtttattgccttgaattggtcaggtttaacaacttcacc 754
|| || |||||||| || | || ||||||||||||||
Sbjct: 631 attaatagccttgaactgacctggcttaacaacttcacc 593
Score = 65.9 bits (33), Expect = 5e-009
Identities = 144/181 (79%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 243 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 184
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 183 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 124
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 123 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 64
Query: 1284 a 1284
|
Sbjct: 63 a 63
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 441 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 382
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 381 ctctgaccattttgcattcccttctcaac 353
>gb|AW290737.1|AW290737 NXNV046D06F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV046D06 5', mRNA sequence
Length = 385
Score = 67.9 bits (34), Expect = 1e-009
Identities = 144/181 (79%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 184 tgctgcatctgctgnatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 125
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 124 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 65
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 64 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 5
Query: 1284 a 1284
|
Sbjct: 4 a 4
>gb|BX252596.1|BX252596 BX252596 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP067C06 similar to DNAJ PROTEIN, mRNA
sequence
Length = 659
Score = 67.9 bits (34), Expect = 1e-009
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 1437 agggcatcttcaccatactgatcataaatctcacgtttctctggatcactcaaaacctca 1496
||||||||||| |||||||||||||| ||||| | ||| |||||||||||||| || |||
Sbjct: 371 agggcatcttctccatactgatcatatatctcccttttttctggatcactcaagacttca 312
Query: 1497 ta 1498
||
Sbjct: 311 ta 310
Score = 40.1 bits (20), Expect = 0.30
Identities = 83/104 (79%)
Strand = Plus / Minus
Query: 1188 gaagcaccagacttcgagcccttgcccttgcacttggagcagatgacattgcgcgaaaga 1247
||||||||||| || ||||| || ||||| ||||| || || || ||||| | ||| |||
Sbjct: 629 gaagcaccagatttggagcctttccccttacacttcgaacatataacatttctcgagaga 570
Query: 1248 gagagcttctttgagattccattgtaaagatcttccagagaaac 1291
|| ||||| | || |||||||||| || || |||||||||||
Sbjct: 569 gatagctttctggatgttccattgtacaggtcctccagagaaac 526
>gb|BX252900.1|BX252900 BX252900 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP074F04 similar to DNAJ PROTEIN, mRNA
sequence
Length = 443
Score = 67.9 bits (34), Expect = 1e-009
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 1437 agggcatcttcaccatactgatcataaatctcacgtttctctggatcactcaaaacctca 1496
||||||||||| |||||||||||||| ||||| | ||| |||||||||||||| || |||
Sbjct: 370 agggcatcttctccatactgatcatatatctcccttttttctggatcactcaagacttca 311
Query: 1497 ta 1498
||
Sbjct: 310 ta 309
>gb|CD027403.1|CD027403 NXNV046D06 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV046D06 5' similar to Arabidopsis thaliana sequence
At3g44110 dnaJ protein homolog atj3 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 385
Score = 67.9 bits (34), Expect = 1e-009
Identities = 144/181 (79%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 184 tgctgcatctgctgnatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 125
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 124 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 65
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 64 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 5
Query: 1284 a 1284
|
Sbjct: 4 a 4
>gb|BX681362.1|BX681362 BX681362 RS Pinus pinaster cDNA clone RS57F06, mRNA sequence
Length = 611
Score = 65.9 bits (33), Expect = 5e-009
Identities = 75/89 (84%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || |||| ||||||
Sbjct: 607 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttggaaagtgatc 548
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 547 ctctgaccattttgcattcccttctcaac 519
Score = 61.9 bits (31), Expect = 8e-008
Identities = 71/83 (85%), Gaps = 1/83 (1%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||||||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 97 ccacccattccttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 38
Query: 1479 ggatcactcaaaacctcataggc 1501
|||||||| || |||||||||||
Sbjct: 37 ggatcact-aagacctcataggc 16
Score = 60.0 bits (30), Expect = 3e-007
Identities = 194/248 (78%), Gaps = 3/248 (1%)
Strand = Plus / Minus
Query: 1107 tgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgagccc 1166
||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || || ||
Sbjct: 406 tgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagaccct 347
Query: 1167 tggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttggag 1226
||||||||| ||| ||||||| || |||||||| || || || |||||||| || |||
Sbjct: 346 tggcacccactgcatttcattgatgcgccagactttgaccctttccccttgcatttagag 287
Query: 1227 cagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttccaga 1286
|| | ||||| || || || || | ||||||||| ||||||||||||| |||||||
Sbjct: 286 cacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttccaat 227
Query: 1287 gaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctgctg 1343
|| || || | | ||| || |||||||| || ||||||||||||| |||||||||||
Sbjct: 226 gataccttcaaggggtgaacaacatcttcgcctctcctttgccttcgggttcccctgctg 167
Query: 1344 cttccacc 1351
|| |||||
Sbjct: 166 ctaccacc 159
>gb|DN629335.1|DN629335 EST980151 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTABD23, mRNA sequence
Length = 784
Score = 65.9 bits (33), Expect = 5e-009
Identities = 197/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Plus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | || ||||| || ||
Sbjct: 438 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaacttcatgccagac 497
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 498 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 557
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 558 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 617
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 618 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 677
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 678 ctgctaccacc 688
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 240 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 299
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 300 ctctgaccattttgcattcccttctcaac 328
Score = 48.1 bits (24), Expect = 0.001
Identities = 66/80 (82%)
Strand = Plus / Plus
Query: 675 cccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttgaattgg 734
||||||||||| |||| |||||||| ||||| || ||||| || || |||||||| ||
Sbjct: 9 cccttcatgaatggccgctggtaaacaggcattccttcatcattaatagccttgaactga 68
Query: 735 tcaggtttaacaacttcacc 754
| || ||||||||||||||
Sbjct: 69 cctggcttaacaacttcacc 88
>gb|DN632290.1|DN632290 EST983106 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTACM69, mRNA sequence
Length = 783
Score = 65.9 bits (33), Expect = 5e-009
Identities = 197/251 (78%), Gaps = 3/251 (1%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 346 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 287
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 286 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 227
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
| ||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 226 gggcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 167
Query: 1284 agagaaactttaagtgagtggactacatcttctcccctcctttgccttc---ttcccctg 1340
| || || || | | ||| || |||||||| || ||||||||||||| ||||||||
Sbjct: 166 aatgataccttcaacgggtgaacaacatcttcgcctctcctttgccttcgggttcccctg 107
Query: 1341 ctgcttccacc 1351
||||| |||||
Sbjct: 106 ctgctaccacc 96
Score = 50.1 bits (25), Expect = 3e-004
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| ||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 544 aatacaatgtcatcagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 485
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 484 ctctgaccattttgcattcccttctcaac 456
Score = 48.1 bits (24), Expect = 0.001
Identities = 66/80 (82%)
Strand = Plus / Minus
Query: 675 cccttcatgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttgaattgg 734
||||||||||| |||| |||||||| ||||| || ||||| || || |||||||| ||
Sbjct: 775 cccttcatgaatggccgctggtaaacaggcattccttcatcattaatagccttgaactga 716
Query: 735 tcaggtttaacaacttcacc 754
| || ||||||||||||||
Sbjct: 715 cctggcttaacaacttcacc 696
>gb|DR116965.1|DR116965 RTMG1_3_H01.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_3_H01_A029 5', mRNA sequence
Length = 680
Score = 65.9 bits (33), Expect = 5e-009
Identities = 93/113 (82%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 544 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaaca 485
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| | ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 484 ggcattcgttcatcattaatagccttgaactgacctggcttaacaacttcacc 432
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 280 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 221
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 220 ctctgaccattttgcattcccttctcaac 192
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 643 tcctcacactcatctaactccatgtctgttagct 610
Score = 36.2 bits (18), Expect = 4.6
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaagg 1129
|||||||||||||| ||||| |||||
Sbjct: 82 tgctgcatctgctggatcatcgaagg 57
>gb|DR388422.1|DR388422 RTHG1_28_E04.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_28_E04_A029 3', mRNA sequence
Length = 581
Score = 65.9 bits (33), Expect = 5e-009
Identities = 93/113 (82%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||| ||| |||| ||||||||
Sbjct: 176 gggaactctacagagaaatgaatgtacagattacccttcaagaatggccgctggtaaaca 117
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| || ||||| || || |||||||| || | || ||||||||||||||
Sbjct: 116 ggcattccttcatcattaatagccttgaactgacctggcttaacaacttcacc 64
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 275 tcctcacactcatctaactccatgtctgttagct 242
>gb|DT630232.1|DT630232 EST1154644 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PIME648, mRNA sequence
Length = 790
Score = 65.9 bits (33), Expect = 5e-009
Identities = 144/181 (79%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 366 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 307
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 306 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 247
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 246 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 187
Query: 1284 a 1284
|
Sbjct: 186 a 186
Score = 56.0 bits (28), Expect = 5e-006
Identities = 112/140 (80%)
Strand = Plus / Minus
Query: 855 agatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaatg 914
||||| || |||||||| ||||| |||| || ||||| ||||| | || |||||||||
Sbjct: 615 agatcgtctccctttctcttgaatttgggatgctccttttgctgaaccacaaatacaatg 556
Query: 915 tctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatcttctggctg 974
|| |||||||| | || ||||||||||| ||||| || ||| |||||| |||| |
Sbjct: 555 tcaccagtaactgcgtcgggcgcttcatctgcttccccttcgaaagtgatcctctgacca 496
Query: 975 tgttgcattcccttctcaac 994
| ||||||||||||||||||
Sbjct: 495 ttttgcattcccttctcaac 476
Score = 38.2 bits (19), Expect = 1.2
Identities = 61/75 (81%)
Strand = Plus / Minus
Query: 680 catgaaaggcctctggtaaatcggcatcccctcatcgtttattgccttgaattggtcagg 739
|||||| |||| |||||||| ||||| || ||||| || || |||||||| || | ||
Sbjct: 790 catgaatggccgctggtaaacaggcattccttcatcattaatagccttgaactgacctgg 731
Query: 740 tttaacaacttcacc 754
||||||||||||||
Sbjct: 730 cttaacaacttcacc 716
>gb|DT630485.1|DT630485 EST1154897 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PIME947, mRNA sequence
Length = 787
Score = 65.9 bits (33), Expect = 5e-009
Identities = 144/181 (79%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 366 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 307
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 306 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 247
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| ||||||||||||| ||||||
Sbjct: 246 gagcacagaacatttcgagatagtgacaacttctttgatgttccattgtaaaggtcttcc 187
Query: 1284 a 1284
|
Sbjct: 186 a 186
Score = 50.1 bits (25), Expect = 3e-004
Identities = 73/89 (82%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 564 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 505
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | |||||||||||||||||
Sbjct: 504 ctctgaccattctgcattcccttctcaac 476
>gb|AW290522.1|AW290522 NXNV025B05F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV025B05 5', mRNA sequence
Length = 452
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 250 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 191
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 190 tgtccccagttacagtgtccggcgcttcatcagcttcacc 151
>gb|BE187292.1|BE187292 NXNV_162_B07_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_162_B07 5' similar to Arabidopsis thaliana
sequence At3g44110 dnaJ protein homolog atj3 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 429
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 195 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 136
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 135 tgtccccagttacagtgtccggcgcttcatcagcttcacc 96
>gb|BF010499.1|BF010499 NXCI_084_G05_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_084_G05 5' similar to Arabidopsis
thaliana sequence At3g44110 dnaJ protein homolog atj3
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 391
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 104 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 45
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 44 tgtccccagttacagtgtccggcgcttcatcagcttcacc 5
>gb|BI077381.1|BI077381 NXPV_096_F05_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_096_F05 5' similar to Arabidopsis
thaliana sequence At3g44110 dnaJ protein homolog atj3
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 303
Score = 63.9 bits (32), Expect = 2e-008
Identities = 82/99 (82%)
Strand = Plus / Minus
Query: 656 gaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatcggcatcccctcatc 715
||||||||||||||| || ||||||||||| |||| |||||||| ||||| | |||||
Sbjct: 118 gaaatgaatgtacagattacccttcatgaatggccgctggtaaacaggcattncttcatc 59
Query: 716 gtttattgccttgaattggtcaggtttaacaacttcacc 754
|| || |||||||| || | || ||||||||||||||
Sbjct: 58 attaatagccttgaactgacctggcttaacaacttcacc 20
>gb|BM427813.1|BM427813 NXRV_003_F06_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV_003_F06 5' similar to Arabidopsis thaliana
sequence At3g44110 dnaJ protein homolog atj3 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 578
Score = 63.9 bits (32), Expect = 2e-008
Identities = 118/147 (80%)
Strand = Plus / Minus
Query: 1421 acccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctctgg 1480
|||||||| ||| || || ||||| || || |||||||||||||| || | |||||| ||
Sbjct: 420 acccattcnttctttgagtgcatcctccccgtactgatcataaatgtctcttttctcagg 361
Query: 1481 atcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccctt 1540
|||||| | ||||| ||||| || || || ||||| ||||| || || || || |||||
Sbjct: 360 atcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccaccctt 301
Query: 1541 gtcggggtggttcttgatagcggcctt 1567
||| || ||||| |||||||| |||||
Sbjct: 300 gtccggatggtttttgatagcagcctt 274
>gb|BQ655596.1|BQ655596 NXRV096_F06_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV096_F06 5' similar to Arabidopsis thaliana
sequence At3g44110 dnaJ protein homolog atj3 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 673
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 362 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 303
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 302 tgtccccagttacagtgtccggcgcttcatcagcttcacc 263
>gb|BQ703111.1|BQ703111 NXSI_136_F02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_136_F02 5' similar to Arabidopsis thaliana
sequence At3g44110 dnaJ protein homolog atj3 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 511
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 351 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 292
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 291 tgtccccagttacagtgtccggcgcttcatcagcttcacc 252
>gb|CD027181.1|CD027181 NXNV025B05 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV025B05 5' similar to Arabidopsis thaliana sequence
At3g44110 dnaJ protein homolog atj3 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 452
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 250 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 191
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 190 tgtccccagttacagtgtccggcgcttcatcagcttcacc 151
>gb|CF394822.1|CF394822 RTDS2_7_D02.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_7_D02_A021 5', mRNA sequence
Length = 762
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 251 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 192
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 191 tgtccccagttacagtgtccggcgcttcatcagcttcacc 152
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 585 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 537
>gb|CF473787.1|CF473787 RTWW2_4_C01.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_4_C01_A021 5', mRNA sequence
Length = 654
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 150 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 91
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 90 tgtccccagttacagtgtccggcgcttcatcagcttcacc 51
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 484 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 436
>gb|CF479400.1|CF479400 RTWW3_23_B10.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_23_B10_A022 5', mRNA sequence
Length = 775
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 508 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 449
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 448 tgtccccagttacagtgtccggcgcttcatcagcttcacc 409
>gb|CF666231.1|CF666231 RTCNT1_21_G03.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_21_G03_A029 5', mRNA sequence
Length = 681
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 142 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 83
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 82 tgtccccagttacagtgtccggcgcttcatcagcttcacc 43
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 476 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 428
>gb|CF669306.1|CF669306 RTCNT1_42_F05.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_42_F05_A029 3', mRNA sequence
Length = 754
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 131 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 72
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 71 tgtccccagttacagtgtccggcgcttcatcagcttcacc 32
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 465 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 417
>gb|BX679813.1|BX679813 BX679813 RS Pinus pinaster cDNA clone RS34C09, mRNA sequence
Length = 557
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 130 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 71
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 70 tgtccccagttacagtgtccggcgcttcatcagcttcacc 31
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 464 acatcgtgcaaagttgtctcttcacattcatccaactccatgtctgtca 416
>gb|BX680731.1|BX680731 BX680731 RS Pinus pinaster cDNA clone RS47G06, mRNA sequence
Length = 643
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 193 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 134
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 133 tgtccccagttacagtgtccggcgcttcatcagcttcacc 94
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 527 acatcgtgcaaagttgtctcttcacattcatccaactccatgtctgtca 479
>gb|CO160604.1|CO160604 FLD1_22_E10.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_22_E10_A029 3', mRNA sequence
Length = 764
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 128 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 69
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 68 tgtccccagttacagtgtccggcgcttcatcagcttcacc 29
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 462 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 414
>gb|CO164513.1|CO164513 FLD1_48_B06.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_48_B06_A029 5', mRNA sequence
Length = 925
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 279 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 220
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 219 tgtccccagttacagtgtccggcgcttcatcagcttcacc 180
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 613 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 565
>gb|CO176666.1|CO176666 NDL1_63_A09.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_63_A09_A029 5', mRNA sequence
Length = 787
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 583 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 524
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 523 tgtccccagttacagtgtccggcgcttcatcagcttcacc 484
>gb|CO199803.1|CO199803 GEO2_3_C10.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_3_C10_A032 5', mRNA sequence
Length = 828
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Plus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 614 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 673
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 674 tgtccccagttacagtgtccggcgcttcatcagcttcacc 713
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 280 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 328
>gb|CO200173.1|CO200173 GEO2_5_G10.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_5_G10_A032 5', mRNA sequence
Length = 873
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 127 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 68
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 67 tgtccccagttacagtgtccggcgcttcatcagcttcacc 28
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 461 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 413
>gb|CO200386.1|CO200386 GEO2_7_D06.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_7_D06_A032 3', mRNA sequence
Length = 842
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 164 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 105
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 104 tgtccccagttacagtgtccggcgcttcatcagcttcacc 65
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 498 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 450
>gb|CO200466.1|CO200466 GEO2_7_D06.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_7_D06_A032 5', mRNA sequence
Length = 860
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 386 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 327
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 326 tgtccccagttacagtgtccggcgcttcatcagcttcacc 287
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 720 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 672
>gb|CO368344.1|CO368344 RTK1_40_C07.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_40_C07_A029 3', mRNA sequence
Length = 859
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 267 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 208
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 207 tgtccccagttacagtgtccggcgcttcatcagcttcacc 168
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 601 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 553
>gb|CO369749.1|CO369749 RTK1_53_A10.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_53_A10_A029 5', mRNA sequence
Length = 702
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 350 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 291
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 290 tgtccccagttacagtgtccggcgcttcatcagcttcacc 251
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 684 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 636
>gb|CV031546.1|CV031546 RTNACL1_2_F04.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_2_F04_A029 3', mRNA sequence
Length = 609
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Plus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 414 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 473
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 474 tgtccccagttacagtgtccggcgcttcatcagcttcacc 513
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 80 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 128
>gb|CV033965.1|CV033965 RTNACL1_37_E07.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_37_E07_A029 5', mRNA sequence
Length = 702
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 615 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 556
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 555 tgtccccagttacagtgtccggcgcttcatcagcttcacc 516
Score = 36.2 bits (18), Expect = 4.6
Identities = 36/42 (85%)
Strand = Plus / Minus
Query: 1413 ccaccaccacccattccttccttaagggcatcttcaccatac 1454
||||| || |||||||| || || ||||||||||| ||||||
Sbjct: 46 ccacctcctcccattccctctttcagggcatcttctccatac 5
>gb|CV034654.1|CV034654 RTNACL1_10_E02.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_10_E02_A029 5', mRNA sequence
Length = 726
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 524 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 465
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 464 tgtccccagttacagtgtccggcgcttcatcagcttcacc 425
>gb|CX646699.1|CX646699 COLD1_11_A08.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_11_A08_A029 3', mRNA sequence
Length = 894
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 292 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 233
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 232 tgtccccagttacagtgtccggcgcttcatcagcttcacc 193
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 626 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 578
>gb|CX646771.1|CX646771 COLD1_11_A08.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_11_A08_A029 5', mRNA sequence
Length = 866
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 598 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 539
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 538 tgtccccagttacagtgtccggcgcttcatcagcttcacc 499
>gb|DR015705.1|DR015705 STRS1_5_D07.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_5_D07_A034 3', mRNA sequence
Length = 589
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Plus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 296 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 355
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 356 tgtccccagttacagtgtccggcgcttcatcagcttcacc 395
>gb|DR015708.1|DR015708 STRS1_5_D10.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_5_D10_A034 3', mRNA sequence
Length = 890
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 269 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 210
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 209 tgtccccagttacagtgtccggcgcttcatcagcttcacc 170
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 603 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 555
>gb|DR021043.1|DR021043 STRS1_42_A09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_42_A09_A034 3', mRNA sequence
Length = 811
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 190 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 131
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 130 tgtccccagttacagtgtccggcgcttcatcagcttcacc 91
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 522 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 474
>gb|DR021115.1|DR021115 STRS1_42_A09.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_42_A09_A034 5', mRNA sequence
Length = 721
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 245 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 186
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 185 tgtccccagttacagtgtccggcgcttcatcagcttcacc 146
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 577 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 529
>gb|DR022907.1|DR022907 STRS1_54_F08.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_54_F08_A034 3', mRNA sequence
Length = 737
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 106 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 47
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 46 tgtccccagttacagtgtccggcgcttcatcagcttcacc 7
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 440 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 392
>gb|DR047440.1|DR047440 RTBOR1_1_C05.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_1_C05_A029 3', mRNA sequence
Length = 793
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Plus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 289 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 348
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 349 tgtccccagttacagtgtccggcgcttcatcagcttcacc 388
>gb|DR052867.1|DR052867 RTCA1_7_A02.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_7_A02_A029 5', mRNA sequence
Length = 849
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Plus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 609 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 668
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 669 tgtccccagttacagtgtccggcgcttcatcagcttcacc 708
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 275 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 323
>gb|DR053629.1|DR053629 RTCA1_12_H03.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_12_H03_A029 3', mRNA sequence
Length = 808
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Plus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 659 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 718
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 719 tgtccccagttacagtgtccggcgcttcatcagcttcacc 758
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 325 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 373
>gb|DR054962.1|DR054962 RTCA1_20_E04.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_20_E04_A029 5', mRNA sequence
Length = 825
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 381 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 322
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 321 tgtccccagttacagtgtccggcgcttcatcagcttcacc 282
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 715 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 667
>gb|DR057637.1|DR057637 RTNIT1_7_A05.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_7_A05_A029 3', mRNA sequence
Length = 867
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 244 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 185
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 184 tgtccccagttacagtgtccggcgcttcatcagcttcacc 145
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 578 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 530
>gb|DR060091.1|DR060091 RTNIT1_25_D07.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_25_D07_A029 5', mRNA sequence
Length = 812
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Plus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 587 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 646
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 647 tgtccccagttacagtgtccggcgcttcatcagcttcacc 686
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 253 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 301
>gb|DR090668.1|DR090668 RTAL1_16_D08.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_16_D08_A029 5', mRNA sequence
Length = 695
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 302 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 243
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 242 tgtccccagttacagtgtccggcgcttcatcagcttcacc 203
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 636 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 588
>gb|DR100578.1|DR100578 STRR1_65_E10.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_65_E10_A033 3', mRNA sequence
Length = 876
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Plus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 485 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 544
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 545 tgtccccagttacagtgtccggcgcttcatcagcttcacc 584
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 151 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 199
>gb|DR109404.1|DR109404 RTS1_1_F11.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_1_F11_A029 5', mRNA sequence
Length = 693
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 252 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 193
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 192 tgtccccagttacagtgtccggcgcttcatcagcttcacc 153
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 586 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 538
>gb|DR163460.1|DR163460 RTFE1_43_C01.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_43_C01_A029 3', mRNA sequence
Length = 884
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 125 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 66
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 65 tgtccccagttacagtgtccggcgcttcatcagcttcacc 26
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 459 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 411
>gb|DR179282.1|DR179282 RTMNUT1_21_D06.b2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_21_D06_A029 3', mRNA sequence
Length = 732
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 117 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 58
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 57 tgtccccagttacagtgtccggcgcttcatcagcttcacc 18
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 451 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 403
>gb|DR388534.1|DR388534 RTHG1_28_G10.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_28_G10_A029 5', mRNA sequence
Length = 750
Score = 63.9 bits (32), Expect = 2e-008
Identities = 83/100 (83%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 309 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 250
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 249 tgtccccagttacagtgtccggcgcttcatcagcttcacc 210
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 643 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 595
>gb|CV036339.1|CV036339 RTNACL1_58_C04.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_58_C04_A029 5', mRNA sequence
Length = 685
Score = 61.9 bits (31), Expect = 8e-008
Identities = 82/99 (82%)
Strand = Plus / Minus
Query: 656 gaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatcggcatcccctcatc 715
||||||||||||||| || ||||||||||| |||| |||||||| ||||| || |||||
Sbjct: 684 gaaatgaatgtacagattacccttcatgaatggccgctggtaaacaggcattccttcatc 625
Query: 716 gtttattgccttgaattggtcaggtttaacaacttcacc 754
|| || || ||||| || | || ||||||||||||||
Sbjct: 624 attaatagcgttgaactgacctggcttaacaacttcacc 586
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 434 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 375
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 374 ctctgaccattttgcattcccttctcaac 346
Score = 58.0 bits (29), Expect = 1e-006
Identities = 143/181 (79%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 236 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 177
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 176 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 117
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttgagattccattgtaaagatcttcc 1283
||||| | ||||| || || || || | ||||||||| |||||| |||||| ||||||
Sbjct: 116 gagcacagaacatttcgagatagtgacaacttctttgatgttccatggtaaaggtcttcc 57
Query: 1284 a 1284
|
Sbjct: 56 a 56
>gb|AW981550.1|AW981550 PC13H10 Pine TriplEx pollen cone library Pinus taeda cDNA clone
PC13H10, mRNA sequence
Length = 592
Score = 60.0 bits (30), Expect = 3e-007
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaa 699
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 67 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaa 10
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 166 tcctcacactcatctaactccatgtctgttagct 133
>gb|BF517796.1|BF517796 NXSI_031_C12_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_031_C12 5' similar to Arabidopsis thaliana
sequence At3g44110 dnaJ protein homolog atj3 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 517
Score = 60.0 bits (30), Expect = 3e-007
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaa 699
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 406 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaa 349
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 142 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 83
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 82 ctctgaccattttgcattcccttctcaac 54
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 505 tcctcacactcatctaactccatgtctgttagct 472
>gb|BX681192.1|BX681192 BX681192 RS Pinus pinaster cDNA clone RS55B04, mRNA sequence
Length = 575
Score = 60.0 bits (30), Expect = 3e-007
Identities = 81/98 (82%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 222 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 163
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttca 950
|||| ||||| || || || ||||||||||||||||||
Sbjct: 162 tgtccccagttacagtgtccggcgcttcatcagcttca 125
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 556 acatcgtgcaaagttgtctcttcacattcatccaactccatgtctgtca 508
>gb|DR161633.1|DR161633 RTFE1_13_B03.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_13_B03_A029 3', mRNA sequence
Length = 491
Score = 60.0 bits (30), Expect = 3e-007
Identities = 145/182 (79%), Gaps = 1/182 (0%)
Strand = Plus / Plus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 212 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 271
Query: 1164 ccctggcacccagggcacctcattgaagcaccagacttcgagcccttgcccttgcacttg 1223
|| ||||||||| ||| |||||||||| |||||||| || || || |||||||| ||
Sbjct: 272 ccttggcacccattgcatttcattgaagcgccagactttgaccctttccccttgcattta 331
Query: 1224 gagcagatgacattgcgcgaaagagagagcttctttga-gattccattgtaaagatcttc 1282
||||| | ||||| || || || || | ||||||||| | ||||||||||||| |||||
Sbjct: 332 gagcacagaacatttcgagatagtgacaacttctttgatgtttccattgtaaaggtcttc 391
Query: 1283 ca 1284
||
Sbjct: 392 ca 393
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 14 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 73
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 74 ctctgaccattttgcattcccttctcaac 102
>gb|DR177127.1|DR177127 RTMNUT1_3_G04.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_3_G04_A029 3', mRNA sequence
Length = 573
Score = 60.0 bits (30), Expect = 3e-007
Identities = 121/150 (80%), Gaps = 1/150 (0%)
Strand = Plus / Plus
Query: 1419 ccacccattccttccttaagggcatcttcaccata-ctgatcataaatctcacgtttctc 1477
|||||||||||||| || || ||||| || || || |||||||||||| || | ||||||
Sbjct: 50 ccacccattccttctttgagtgcatcctccccgtanctgatcataaatgtctcttttctc 109
Query: 1478 tggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgcc 1537
|||||||| | ||||| ||||| || || || ||||| ||||| || || || || ||
Sbjct: 110 aggatcactaagtacctcgtaggcctgagcaagttccttaaacttttctggatctccacc 169
Query: 1538 cttgtcggggtggttcttgatagcggcctt 1567
|||||| || ||||| |||||||| |||||
Sbjct: 170 cttgtccggatggtttttgatagcagcctt 199
>gb|DR386756.1|DR386756 RTHG1_17_F07.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_17_F07_A029 3', mRNA sequence
Length = 817
Score = 60.0 bits (30), Expect = 3e-007
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaa 699
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 419 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctggtaaa 362
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 518 tcctcacactcatctaactccatgtctgttagct 485
>gb|BQ696482.1|BQ696482 NXPV_041_G09_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_041_G09 5' similar to Arabidopsis
thaliana sequence At3g44110 dnaJ protein homolog atj3
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 612
Score = 58.0 bits (29), Expect = 1e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttcaccagggaaggtgatc 965
||||||||||| |||||||| || || ||||||||||| ||||| || ||| ||||||
Sbjct: 298 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttccccttcgaaagtgatc 239
Query: 966 ttctggctgtgttgcattcccttctcaac 994
|||| | | ||||||||||||||||||
Sbjct: 238 ctctgaccattttgcattcccttctcaac 210
Score = 56.0 bits (28), Expect = 5e-006
Identities = 91/113 (80%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcctctggtaaatc 701
|||||||| || | ||||||||||||||| || ||||||||||| |||| ||| ||||
Sbjct: 562 gggaactctacagagaaatgaatgtacagattacccttcatgaatggccgctgntaaaca 503
Query: 702 ggcatcccctcatcgtttattgccttgaattggtcaggtttaacaacttcacc 754
||||| | ||||| || || | |||||| || | || ||||||||||||||
Sbjct: 502 ggcattncttcatcattaatagncttgaactgacctggcttaacaacttcacc 450
Score = 44.1 bits (22), Expect = 0.019
Identities = 79/98 (80%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 100 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 41
Query: 1164 ccctggcacccagggcacctcattgaagcaccagactt 1201
|| ||||||||| ||| |||||||||| ||||||||
Sbjct: 40 ccttggcacccattgcatttcattgaagcgccagactt 3
>gb|AA556894.1|AA556894 736 Loblolly pine C Pinus taeda cDNA clone 7C12B, mRNA sequence
Length = 605
Score = 56.0 bits (28), Expect = 5e-006
Identities = 118/149 (79%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||| ||| || || ||||| || || |||||||||||||| || | ||| ||
Sbjct: 356 ccacccattcnttctttgagtgcatcctccccgtactgatcataaatgtctcttttntca 297
Query: 1479 ggatcactcaaaacctcataggcttgtgcgagctccttgaacttctcggggtcaccgccc 1538
|||||||| | || || ||||| || || || ||||| ||||| || || || || |||
Sbjct: 296 ggatcactaagtacntcgtaggcctgagcaagttccttaaacttttctggatctccaccc 237
Query: 1539 ttgtcggggtggttcttgatagcggcctt 1567
||||| || ||||| |||||||| |||||
Sbjct: 236 ttgtccggatggtttttgatagcagcctt 208
Score = 38.2 bits (19), Expect = 1.2
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 1254 ttctttgagattccattgtaaagatcttcca 1284
|||||||| ||||||||||||| |||||||
Sbjct: 516 ttctttgatgttccattgtaaaggtcttcca 486
>gb|BX682860.1|BX682860 BX682860 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 122G11 similar to DnaJ protein, mRNA sequence
Length = 765
Score = 56.0 bits (28), Expect = 5e-006
Identities = 82/100 (82%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||| ||||| || ||| || | || || ||||
Sbjct: 127 agagatcatcaccctttcgtttgaacttagagtgatctttcaattgcaatacaaaaacaa 68
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 67 tgtccccagttacagtgtccggcgcttcatcagcttcacc 28
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 461 acatcgtgcaaagttgtctcttcacattcatccaactccatgtctgtca 413
>gb|CV034587.1|CV034587 RTNACL1_10_E02.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_10_E02_A029 3', mRNA sequence
Length = 758
Score = 56.0 bits (28), Expect = 5e-006
Identities = 82/100 (82%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || || || ||||
Sbjct: 138 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcgatacaaaaacaa 79
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||||||||
Sbjct: 78 tgtccccagttacagtgtccggcgcttcatcagcttcacc 39
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 472 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 424
>gb|CX649579.1|CX649579 COLD1_36_D11.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_36_D11_A029 3', mRNA sequence
Length = 874
Score = 56.0 bits (28), Expect = 5e-006
Identities = 79/96 (82%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 96 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 37
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagctt 948
|||| ||||| || || || ||||||||||||||||
Sbjct: 36 tgtccccagttacagtgtccggcgcttcatcagctt 1
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 430 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 382
>gb|CX714077.1|CX714077 RTPQ1_17_G07.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_17_G07_A032 3', mRNA sequence
Length = 437
Score = 56.0 bits (28), Expect = 5e-006
Identities = 82/100 (82%)
Strand = Plus / Plus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 54 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 113
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||| ||||| || || || ||||||||||||||| ||||
Sbjct: 114 tgtccccagttacagtgtccggcgcttcatcagctacacc 153
>gb|DR682448.1|DR682448 EST1072523 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAA990, mRNA sequence
Length = 306
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 656 gaaatgaatgtacagcttccccttcatgaaaggcctctggtaaa 699
||||||||||||||| || ||||||||||| |||| ||||||||
Sbjct: 253 gaaatgaatgtacagattacccttcatgaatggccgctggtaaa 296
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Plus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 140 tcctcacactcatctaactccatgtctgttagct 173
>gb|AL751172.1|AL751172 AL751172 RS Pinus pinaster cDNA clone RS05H05 similar to DNAJ, mRNA
sequence
Length = 667
Score = 54.0 bits (27), Expect = 2e-005
Identities = 78/95 (82%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 95 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 36
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagct 947
|||| ||||| || || || |||||||||||||||
Sbjct: 35 tgtccccagttacagtgtccggcgcttcatcagct 1
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 429 acatcgtgcaaagttgtctcttcacattcatccaactccatgtctgtca 381
>gb|CO164553.1|CO164553 FLD1_48_F11.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_48_F11_A029 5', mRNA sequence
Length = 903
Score = 54.0 bits (27), Expect = 2e-005
Identities = 78/95 (82%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 103 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 44
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagct 947
|||| ||||| || || || |||||||||||||||
Sbjct: 43 tgtccccagttacagtgtccggcgcttcatcagct 9
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 437 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 389
>gb|CO164480.1|CO164480 FLD1_48_F11.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_48_F11_A029 3', mRNA sequence
Length = 856
Score = 52.0 bits (26), Expect = 8e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtg 886
||||||| |||||||||| |||||||||||||||
Sbjct: 81 agagatcatcaccctttcgtttgaacttggagtg 48
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 415 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 367
>gb|CO200086.1|CO200086 GEO2_5_G10.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_5_G10_A032 3', mRNA sequence
Length = 861
Score = 52.0 bits (26), Expect = 8e-005
Identities = 77/94 (81%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtggtccttctgctggaggacgaatacaa 912
||||||| |||||||||| ||||||||||||||| || ||| || | || || ||||
Sbjct: 94 agagatcatcaccctttcgtttgaacttggagtgatctttcaattgcaatacaaaaacaa 35
Query: 913 tgtctccagtaacggtatcaggcgcttcatcagc 946
|||| ||||| || || || ||||||||||||||
Sbjct: 34 tgtccccagttacagtgtccggcgcttcatcagc 1
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 428 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 380
>gb|CV033223.1|CV033223 RTNACL1_33_D06.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_33_D06_A029 3', mRNA sequence
Length = 886
Score = 52.0 bits (26), Expect = 8e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtg 886
||||||| |||||||||| |||||||||||||||
Sbjct: 91 agagatcatcaccctttcgtttgaacttggagtg 58
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 425 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 377
>gb|CV033690.1|CV033690 RTNACL1_36_C01.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_36_C01_A029 3', mRNA sequence
Length = 846
Score = 52.0 bits (26), Expect = 8e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtg 886
||||||| |||||||||| |||||||||||||||
Sbjct: 66 agagatcatcaccctttcgtttgaacttggagtg 33
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 400 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 352
>gb|CX649655.1|CX649655 COLD1_36_D11.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_36_D11_A029 5', mRNA sequence
Length = 224
Score = 52.0 bits (26), Expect = 8e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtg 886
||||||| |||||||||| |||||||||||||||
Sbjct: 69 agagatcatcaccctttcgtttgaacttggagtg 36
>gb|DR015877.1|DR015877 STRS1_6_F05.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_6_F05_A034 3', mRNA sequence
Length = 886
Score = 52.0 bits (26), Expect = 8e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtg 886
||||||| |||||||||| |||||||||||||||
Sbjct: 90 agagatcatcaccctttcgtttgaacttggagtg 57
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 424 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 376
>gb|DR054888.1|DR054888 RTCA1_20_E04.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_20_E04_A029 3', mRNA sequence
Length = 754
Score = 52.0 bits (26), Expect = 8e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtg 886
||||||| |||||||||| |||||||||||||||
Sbjct: 53 agagatcatcaccctttcgtttgaacttggagtg 20
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 387 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 339
>gb|DR090593.1|DR090593 RTAL1_16_D08.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_16_D08_A029 3', mRNA sequence
Length = 829
Score = 52.0 bits (26), Expect = 8e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtg 886
||||||| |||||||||| |||||||||||||||
Sbjct: 69 agagatcatcaccctttcgtttgaacttggagtg 36
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 403 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 355
>gb|DR098216.1|DR098216 STRR1_39_H06.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_39_H06_A033 5', mRNA sequence
Length = 491
Score = 52.0 bits (26), Expect = 8e-005
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 853 agagatcttcaccctttcttttgaacttggagtg 886
||||||| |||||||||| |||||||||||||||
Sbjct: 48 agagatcatcaccctttcgtttgaacttggagtg 15
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 382 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 334
>gb|BF221030.1|BF221030 NXCI_162_C03_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_162_C03 5' similar to Arabidopsis
thaliana sequence At2g20560 putative heat shock protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 478
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 1443 tcttcaccatactgatcataaatctcacgtttctctggatcactcaaaacctcataggct 1502
||||||||||||||||||||||| | ||||| | | |||||||||| || ||||| |||
Sbjct: 88 tcttcaccatactgatcataaattgcgcgtttttgttgatcactcaacacatcataagct 29
Query: 1503 t 1503
|
Sbjct: 28 t 28
>gb|CD016396.1|CD016396 NXCI_043_A05_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_043_A05 5' similar to Arabidopsis
thaliana sequence At3g44110 dnaJ protein homolog atj3 see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 165
Score = 50.1 bits (25), Expect = 3e-004
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 1419 ccacccattccttccttaagggcatcttcaccatactgatcataaatctcacgtttctct 1478
|||||||||| ||| || || ||||| || || |||||||||||||| || | ||||||
Sbjct: 106 ccacccattcnttctttgagtgcatcctccccgtactgatcataaatgtctcttttctca 47
Query: 1479 ggatcact 1486
||||||||
Sbjct: 46 ggatcact 39
>gb|CF394028.1|CF394028 RTDS2_2_H10.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_2_H10_A021 5', mRNA sequence
Length = 696
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 1443 tcttcaccatactgatcataaatctcacgtttctctggatcactcaaaacctcataggct 1502
||||||||||||||||||||||| | ||||| | | |||||||||| || ||||| |||
Sbjct: 358 tcttcaccatactgatcataaattgcgcgtttttgttgatcactcaacacatcataagct 299
Query: 1503 t 1503
|
Sbjct: 298 t 298
>gb|CF395103.1|CF395103 RTDS2_9_A08.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_9_A08_A021 5', mRNA sequence
Length = 830
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 1443 tcttcaccatactgatcataaatctcacgtttctctggatcactcaaaacctcataggct 1502
||||||||||||||||||||||| | ||||| | | |||||||||| || ||||| |||
Sbjct: 215 tcttcaccatactgatcataaattgcgcgtttttgttgatcactcaacacatcataagct 156
Query: 1503 t 1503
|
Sbjct: 155 t 155
>gb|CF398945.1|CF398945 RTDS3_11_D06.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_11_D06_A022 5', mRNA sequence
Length = 693
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 1443 tcttcaccatactgatcataaatctcacgtttctctggatcactcaaaacctcataggct 1502
||||||||||||||||||||||| | ||||| | | |||||||||| || ||||| |||
Sbjct: 89 tcttcaccatactgatcataaattgcgcgtttttgttgatcactcaacacatcataagct 30
Query: 1503 t 1503
|
Sbjct: 29 t 29
>gb|CF471100.1|CF471100 RTDS1_16_F09.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_16_F09_A015 5', mRNA sequence
Length = 811
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 1443 tcttcaccatactgatcataaatctcacgtttctctggatcactcaaaacctcataggct 1502
||||||||||||||||||||||| | ||||| | | |||||||||| || ||||| |||
Sbjct: 277 tcttcaccatactgatcataaattgcgcgtttttgttgatcactcaacacatcataagct 218
Query: 1503 t 1503
|
Sbjct: 217 t 217
>gb|CF668011.1|CF668011 RTCNT1_33_G11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_33_G11_A029 5', mRNA sequence
Length = 786
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 1443 tcttcaccatactgatcataaatctcacgtttctctggatcactcaaaacctcataggct 1502
||||||||||||||||||||||| | ||||| | | |||||||||| || ||||| |||
Sbjct: 352 tcttcaccatactgatcataaattgcgcgtttttgttgatcactcaacacatcataagct 293
Query: 1503 t 1503
|
Sbjct: 292 t 292
>gb|CO364952.1|CO364952 RTK1_22_F08.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_22_F08_A029 5', mRNA sequence
Length = 773
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 1443 tcttcaccatactgatcataaatctcacgtttctctggatcactcaaaacctcataggct 1502
||||||||||||||||||||||| | ||||| | | |||||||||| || ||||| |||
Sbjct: 377 tcttcaccatactgatcataaattgcgcgtttttgttgatcactcaacacatcataagct 318
Query: 1503 t 1503
|
Sbjct: 317 t 317
>gb|DR049412.1|DR049412 RTBOR1_16_G03.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_16_G03_A029 3', mRNA sequence
Length = 725
Score = 50.1 bits (25), Expect = 3e-004
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 642 gggaactccaccgtgaaatgaatgtacagcttccccttcatgaaaggcc 690
|||||||| || | ||||||||||||||| || ||||||||||| ||||
Sbjct: 52 gggaactctacagagaaatgaatgtacagattacccttcatgaatggcc 4
Score = 36.2 bits (18), Expect = 4.6
Identities = 30/34 (88%)
Strand = Plus / Minus
Query: 543 tcctcgcattcatctatctccatgtctgtcagct 576
||||| || ||||||| |||||||||||| ||||
Sbjct: 151 tcctcacactcatctaactccatgtctgttagct 118
>gb|DR056041.1|DR056041 RTCA1_27_E07.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_27_E07_A029 5', mRNA sequence
Length = 460
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 1443 tcttcaccatactgatcataaatctcacgtttctctggatcactcaaaacctcataggct 1502
||||||||||||||||||||||| | ||||| | | |||||||||| || ||||| |||
Sbjct: 303 tcttcaccatactgatcataaattgcgcgtttttgttgatcactcaacacatcataagct 244
Query: 1503 t 1503
|
Sbjct: 243 t 243
>gb|DR079033.1|DR079033 RTFEPL1_8_C01.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_8_C01_A029 5', mRNA sequence
Length = 775
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 1443 tcttcaccatactgatcataaatctcacgtttctctggatcactcaaaacctcataggct 1502
||||||||||||||||||||||| | ||||| | | |||||||||| || ||||| |||
Sbjct: 326 tcttcaccatactgatcataaattgcgcgtttttgttgatcactcaacacatcataagct 267
Query: 1503 t 1503
|
Sbjct: 266 t 266
>gb|DR181532.1|DR181532 RTMNUT1_39_B03.g2_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_39_B03_A029 5', mRNA sequence
Length = 716
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 1443 tcttcaccatactgatcataaatctcacgtttctctggatcactcaaaacctcataggct 1502
||||||||||||||||||||||| | ||||| | | |||||||||| || ||||| |||
Sbjct: 318 tcttcaccatactgatcataaattgcgcgtttttgttgatcactcaacacatcataagct 259
Query: 1503 t 1503
|
Sbjct: 258 t 258
>gb|DR685405.1|DR685405 EST1075482 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAB348 3' end, mRNA sequence
Length = 808
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 1443 tcttcaccatactgatcataaatctcacgtttctctggatcactcaaaacctcataggct 1502
||||||||||||||||||||||| | ||||| | | |||||||||| || ||||| |||
Sbjct: 385 tcttcaccatactgatcataaattgcgcgtttttgttgatcactcaacacatcataagct 326
Query: 1503 t 1503
|
Sbjct: 325 t 325
>gb|DR692360.1|DR692360 EST1082448 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWADL27 3' end, mRNA sequence
Length = 765
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 1443 tcttcaccatactgatcataaatctcacgtttctctggatcactcaaaacctcataggct 1502
||||||||||||||||||||||| | ||||| | | |||||||||| || ||||| |||
Sbjct: 335 tcttcaccatactgatcataaattgcgcgtttttgttgatcactcaacacatcataagct 276
Query: 1503 t 1503
|
Sbjct: 275 t 275
>gb|DT632629.1|DT632629 EST1147560 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFM07 3' end, mRNA sequence
Length = 823
Score = 50.1 bits (25), Expect = 3e-004
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 1443 tcttcaccatactgatcataaatctcacgtttctctggatcactcaaaacctcataggct 1502
||||||||||||||||||||||| | ||||| | | |||||||||| || ||||| |||
Sbjct: 393 tcttcaccatactgatcataaattgcgcgtttttgttgatcactcaacacatcataagct 334
Query: 1503 t 1503
|
Sbjct: 333 t 333
>gb|AL750379.1|AL750379 AL750379 RN Pinus pinaster cDNA clone RN01H03 similar to DNAJ, mRNA
sequence
Length = 360
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 909 acaatgtctccagtaacggtatcaggcgcttcatcagcttcacc 952
|||||||| ||||| || || || ||||||||||||||||||||
Sbjct: 330 acaatgtccccagttacagtgtccggcgcttcatcagcttcacc 287
>gb|BG833034.1|BG833034 NXPV_088_C02_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_088_C02 5' similar to Arabidopsis
thaliana sequence At3g44110 dnaJ protein homolog atj3
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 460
Score = 48.1 bits (24), Expect = 0.001
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 906 aatacaatgtctccagtaacggtatcaggcgcttcatcagcttc 949
||||||||||| |||||||| || || ||||||||||| |||||
Sbjct: 298 aatacaatgtcaccagtaactgtgtcgggcgcttcatctgcttc 255
Score = 44.1 bits (22), Expect = 0.019
Identities = 79/98 (80%)
Strand = Plus / Minus
Query: 1104 tgctgcatctgctgtatcatggaaggccccagctgacgaatggtgactttcatacctgag 1163
|||||||||||||| ||||| ||||| || || || | ||| | ||| ||||| || ||
Sbjct: 100 tgctgcatctgctggatcatcgaaggtccaagatgtctaatagagaccttcatgccagac 41
Query: 1164 ccctggcacccagggcacctcattgaagcaccagactt 1201
|| ||||||||| ||| |||||||||| ||||||||
Sbjct: 40 ccttggcacccattgcatttcattgaagcgccagactt 3
>gb|CF667193.1|CF667193 RTCNT1_28_E12.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_28_E12_A029 5', mRNA sequence
Length = 747
Score = 46.1 bits (23), Expect = 0.005
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 853 agagatcttcaccctttcttttgaacttgga 883
||||||| |||||||||| ||||||||||||
Sbjct: 717 agagatcatcaccctttcgtttgaacttgga 747
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 383 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 431
>gb|CF669704.1|CF669704 RTCNT1_45_C04.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_45_C04_A029 5', mRNA sequence
Length = 814
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1443 tcttcaccatactgatcataaat 1465
|||||||||||||||||||||||
Sbjct: 214 tcttcaccatactgatcataaat 192
>gb|DR180466.1|DR180466 RTMNUT1_28_G01.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_28_G01_A029 5', mRNA sequence
Length = 689
Score = 46.1 bits (23), Expect = 0.005
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 1443 tcttcaccatactgatcataaat 1465
|||||||||||||||||||||||
Sbjct: 137 tcttcaccatactgatcataaat 115
>gb|AA739575.1|AA739575 340 PtIFG2 Pinus taeda cDNA clone 8552M 3', mRNA sequence
Length = 407
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 118 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 70
>gb|AI813068.1|AI813068 20D12 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 521
Score = 42.1 bits (21), Expect = 0.075
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 525 acatcatgcatagtcgtctcctcgcattcatctatctccatgtctgtca 573
||||| |||| ||| ||||| || |||||||| | ||||||||||||||
Sbjct: 332 acatcgtgcaaagttgtctcttcacattcatccacctccatgtctgtca 284
Database: Pinus_nucl_with_EST.fasta
Posted date: May 2, 2006 3:25 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 243,173
Number of Sequences: 355925
Number of extensions: 243173
Number of successful extensions: 69685
Number of sequences better than 10.0: 311
Number of HSP's better than 10.0 without gapping: 311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68282
Number of HSP's gapped (non-prelim): 1214
length of query: 1723
length of database: 217,277,237
effective HSP length: 20
effective length of query: 1703
effective length of database: 210,158,737
effective search space: 357900329111
effective search space used: 357900329111
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)