BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805202.2.1
(1139 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW011230.1|AW011230 ST18C07 Pine TriplEx shoot tip libra... 48 8e-004
gb|AW064721.1|AW064721 ST35A02 Pine TriplEx shoot tip libra... 48 8e-004
gb|AW290426.1|AW290426 NXNV020E04F Nsf Xylem Normal wood Ve... 48 8e-004
gb|BX252707.1|BX252707 BX252707 Pinus pinaster differenciat... 48 8e-004
gb|BX253213.1|BX253213 BX253213 Pinus pinaster differenciat... 48 8e-004
gb|BE187297.1|BE187297 NXNV_162_B12_F Nsf Xylem Normal wood... 48 8e-004
gb|BG318905.1|BG318905 NXPV_021_C11_F NXPV (Nsf Xylem Plani... 48 8e-004
gb|BQ699182.1|BQ699182 NXRV120_E07_F NXRV (Nsf Xylem Root w... 48 8e-004
gb|CD027086.1|CD027086 NXNV020E04 Nsf Xylem Normal wood Ver... 48 8e-004
gb|CF475707.1|CF475707 RTWW2_11_G10.g1_A021 Well-watered lo... 48 8e-004
gb|CF672548.1|CF672548 RTCNT1_64_H05.b1_A029 Root control P... 48 8e-004
gb|CF672623.1|CF672623 RTCNT1_64_H05.g1_A029 Root control P... 48 8e-004
gb|CO160128.1|CO160128 FLD1_19_A03.b1_A029 Root flooded Pin... 48 8e-004
gb|CO160201.1|CO160201 FLD1_19_A03.g1_A029 Root flooded Pin... 48 8e-004
gb|CO199374.1|CO199374 GEO1_20_F02.g1_A029 Root gravitropis... 48 8e-004
gb|CV035712.1|CV035712 RTNACL1_42_A06.b1_A029 Roots plus ad... 48 8e-004
gb|CV035788.1|CV035788 RTNACL1_42_A06.g1_A029 Roots plus ad... 48 8e-004
gb|DN609369.1|DN609369 EST962419 Subtracted pine embryo lib... 48 8e-004
gb|DR012508.1|DR012508 HEAT1_13_G02.b1_A029 Root at 37 C fo... 48 8e-004
gb|DR012588.1|DR012588 HEAT1_13_G02.g1_A029 Root at 37 C fo... 48 8e-004
gb|DR014618.1|DR014618 HEAT1_50_C10.g1_A029 Root at 37 C fo... 48 8e-004
gb|DR014767.1|DR014767 HEAT1_51_B06.g1_A029 Root at 37 C fo... 48 8e-004
gb|DR017755.1|DR017755 STRS1_18_G04.b1_A034 Shoot tip pitch... 48 8e-004
gb|DR017840.1|DR017840 STRS1_18_G04.g1_A034 Shoot tip pitch... 48 8e-004
gb|DR055871.1|DR055871 RTCA1_26_B02.g1_A029 Roots minus cal... 48 8e-004
gb|DR058638.1|DR058638 RTNIT1_13_B05.b1_A029 Roots minus ni... 48 8e-004
gb|DR058721.1|DR058721 RTNIT1_13_B05.g1_A029 Roots minus ni... 48 8e-004
gb|DR089709.1|DR089709 RTAL1_10_G10.b1_A029 Roots plus adde... 48 8e-004
gb|DR089794.1|DR089794 RTAL1_10_G10.g1_A029 Roots plus adde... 48 8e-004
gb|DR091888.1|DR091888 RTAL1_24_D06.g1_A029 Roots plus adde... 48 8e-004
gb|DR385882.1|DR385882 RTHG1_11_A07.g1_A029 Roots plus adde... 48 8e-004
gb|DR682838.1|DR682838 EST1072913 Normalized pine embryo li... 48 8e-004
gb|DR682839.1|DR682839 EST1072914 Normalized pine embryo li... 48 8e-004
gb|DR683008.1|DR683008 EST1073083 Normalized pine embryo li... 48 8e-004
gb|DR683009.1|DR683009 EST1073084 Normalized pine embryo li... 48 8e-004
gb|DR688845.1|DR688845 EST1078931 Normalized pine embryo li... 48 8e-004
gb|DR694166.1|DR694166 EST1084256 Normalized pine embryo li... 48 8e-004
gb|DR744595.1|DR744595 RTCU1_23_C03.g1_A029 Roots plus adde... 48 8e-004
gb|DT627731.1|DT627731 EST1156480 Subtracted pine embryo li... 48 8e-004
gb|DT631560.1|DT631560 EST1146491 Normalized pine embryo li... 48 8e-004
gb|BX253625.1|BX253625 BX253625 Pinus pinaster differenciat... 46 0.003
gb|CO367704.1|CO367704 RTK1_36_B04.b1_A029 Roots minus pota... 46 0.003
gb|CX712484.1|CX712484 RTPQ1_2_G01.g2_A032 Roots treated wi... 46 0.003
gb|BG039422.1|BG039422 NXSI_098_H06_F NXSI (Nsf Xylem Side ... 42 0.049
gb|BQ698277.1|BQ698277 NXPV_065_F10_F NXPV (Nsf Xylem Plani... 42 0.049
gb|DN612441.1|DN612441 EST965491 Subtracted pine embryo lib... 42 0.049
gb|BQ107356.1|BQ107356 NXLV092_F12_F NXLV (Nsf Xylem Late w... 40 0.19
gb|CF478124.1|CF478124 RTWW3_19_B10.b1_A022 Well-watered lo... 40 0.19
gb|CF672850.1|CF672850 RTCNT1_74_H02.b1_A029 Root control P... 40 0.19
gb|CN784372.1|CN784372 EST783063 Sequencing ESTs from loblo... 40 0.19
gb|CN784480.1|CN784480 EST783171 Sequencing ESTs from loblo... 40 0.19
gb|CN785180.1|CN785180 EST783871 Sequencing ESTs from loblo... 40 0.19
gb|CO168589.1|CO168589 NDL1_1_D01.b1_A029 Needles control P... 40 0.19
gb|CO168874.1|CO168874 NDL1_3_D02.b1_A029 Needles control P... 40 0.19
gb|CO169855.1|CO169855 NDL1_10_C10.b1_A029 Needles control ... 40 0.19
gb|CO170666.1|CO170666 NDL1_16_A10.b1_A029 Needles control ... 40 0.19
gb|CO170711.1|CO170711 NDL1_16_G11.b1_A029 Needles control ... 40 0.19
gb|CO170712.1|CO170712 NDL1_16_H01.b1_A029 Needles control ... 40 0.19
gb|CO170781.1|CO170781 NDL1_16_G11.g1_A029 Needles control ... 40 0.19
gb|CO171222.1|CO171222 NDL1_20_A08.b1_A029 Needles control ... 40 0.19
gb|CO171630.1|CO171630 NDL1_23_F10.b1_A029 Needles control ... 40 0.19
gb|CO171692.1|CO171692 NDL1_23_F10.g1_A029 Needles control ... 40 0.19
gb|CO171881.1|CO171881 NDL1_25_H03.b1_A029 Needles control ... 40 0.19
gb|CO172093.1|CO172093 NDL1_27_D08.b1_A029 Needles control ... 40 0.19
gb|CO172149.1|CO172149 NDL1_27_D08.g1_A029 Needles control ... 40 0.19
gb|CO172370.1|CO172370 NDL1_29_G04.b1_A029 Needles control ... 40 0.19
gb|CO172451.1|CO172451 NDL1_29_G04.g1_A029 Needles control ... 40 0.19
gb|CO172979.1|CO172979 NDL1_33_D10.b1_A029 Needles control ... 40 0.19
gb|CO174303.1|CO174303 NDL1_43_D11.b1_A029 Needles control ... 40 0.19
gb|CO174461.1|CO174461 NDL1_44_D10.b1_A029 Needles control ... 40 0.19
gb|CO174543.1|CO174543 NDL1_44_D10.g1_A029 Needles control ... 40 0.19
gb|CO174928.1|CO174928 NDL1_47_E03.b1_A029 Needles control ... 40 0.19
gb|CO175010.1|CO175010 NDL1_47_F03.g1_A029 Needles control ... 40 0.19
gb|CO175660.1|CO175660 NDL1_56_E03.b1_A029 Needles control ... 40 0.19
gb|CO175694.1|CO175694 NDL1_56_H08.b1_A029 Needles control ... 40 0.19
gb|CO176330.1|CO176330 NDL1_61_G11.b1_A029 Needles control ... 40 0.19
gb|CO409025.1|CO409025 EST839410 Sequencing ESTs from loblo... 40 0.19
gb|CO409470.1|CO409470 EST839855 Sequencing ESTs from loblo... 40 0.19
gb|CO410088.1|CO410088 EST840473 Sequencing ESTs from loblo... 40 0.19
gb|CO412241.1|CO412241 EST842626 Sequencing ESTs from loblo... 40 0.19
gb|CO361480.1|CO361480 NDL2_5_C11.b1_A029 Needles control 2... 40 0.19
gb|CO361489.1|CO361489 NDL2_5_D08.b1_A029 Needles control 2... 40 0.19
gb|CO361562.1|CO361562 NDL2_5_C11.g1_A029 Needles control 2... 40 0.19
gb|CO361570.1|CO361570 NDL2_5_D08.g1_A029 Needles control 2... 40 0.19
gb|CO361651.1|CO361651 NDL2_6_D06.b1_A029 Needles control 2... 40 0.19
gb|CO361722.1|CO361722 NDL2_6_D06.g1_A029 Needles control 2... 40 0.19
gb|CV032941.1|CV032941 RTNACL1_19_F04.b1_A029 Roots plus ad... 40 0.19
gb|CV135595.1|CV135595 EST846804 Sequencing ESTs from loblo... 40 0.19
gb|CV137529.1|CV137529 EST848738 Sequencing ESTs from loblo... 40 0.19
gb|CV138152.1|CV138152 EST849361 Sequencing ESTs from loblo... 40 0.19
gb|CV138545.1|CV138545 EST849754 Sequencing ESTs from loblo... 40 0.19
gb|CV139084.1|CV139084 EST850293 Sequencing ESTs from loblo... 40 0.19
gb|CV143470.1|CV143470 EST854679 Sequencing ESTs from loblo... 40 0.19
gb|CV144244.1|CV144244 EST855453 Sequencing ESTs from loblo... 40 0.19
gb|CV146074.1|CV146074 EST857283 Sequencing ESTs from loblo... 40 0.19
gb|CV147348.1|CV147348 EST858557 Sequencing ESTs from loblo... 40 0.19
gb|CX645642.1|CX645642 COLD1_4_G04.b1_A029 Root cold Pinus ... 40 0.19
gb|CX646591.1|CX646591 COLD1_10_F11.b1_A029 Root cold Pinus... 40 0.19
gb|DN445932.1|DN445932 EST941731 Sequencing ESTs from loblo... 40 0.19
gb|DN447216.1|DN447216 EST943015 Sequencing ESTs from loblo... 40 0.19
gb|DN450120.1|DN450120 EST945919 Sequencing ESTs from loblo... 40 0.19
gb|DN458550.1|DN458550 EST954349 Sequencing ESTs from loblo... 40 0.19
gb|DN459473.1|DN459473 EST955272 Sequencing ESTs from loblo... 40 0.19
gb|DN459700.1|DN459700 EST955499 Sequencing ESTs from loblo... 40 0.19
gb|DN459981.1|DN459981 EST955780 Sequencing ESTs from loblo... 40 0.19
gb|DN460755.1|DN460755 EST956554 Sequencing ESTs from loblo... 40 0.19
gb|DN461482.1|DN461482 EST957281 Sequencing ESTs from loblo... 40 0.19
gb|DN464444.1|DN464444 EST960243 Sequencing ESTs from loblo... 40 0.19
gb|DN465630.1|DN465630 EST961429 Sequencing ESTs from loblo... 40 0.19
gb|DN628841.1|DN628841 EST979657 Subtracted pine embryo lib... 40 0.19
gb|DN629345.1|DN629345 EST980161 Subtracted pine embryo lib... 40 0.19
gb|DN633612.1|DN633612 EST984428 Subtracted pine embryo lib... 40 0.19
gb|DR015064.1|DR015064 STRS1_1_G02.b1_A034 Shoot tip pitch ... 40 0.19
gb|DR015131.1|DR015131 STRS1_1_E04.g1_A034 Shoot tip pitch ... 40 0.19
gb|DR015153.1|DR015153 STRS1_1_G02.g1_A034 Shoot tip pitch ... 40 0.19
gb|DR015159.1|DR015159 STRS1_1_G08.g1_A034 Shoot tip pitch ... 40 0.19
gb|DR015202.1|DR015202 STRS1_2_C08.b1_A034 Shoot tip pitch ... 40 0.19
gb|DR015552.1|DR015552 STRS1_4_E09.b1_A034 Shoot tip pitch ... 40 0.19
gb|DR015635.1|DR015635 STRS1_4_E09.g1_A034 Shoot tip pitch ... 40 0.19
gb|DR015852.1|DR015852 STRS1_6_C03.b1_A034 Shoot tip pitch ... 40 0.19
gb|DR015924.1|DR015924 STRS1_6_C03.g1_A034 Shoot tip pitch ... 40 0.19
gb|DR015929.1|DR015929 STRS1_6_C09.g1_A034 Shoot tip pitch ... 40 0.19
gb|DR016216.1|DR016216 STRS1_8_D02.g1_A034 Shoot tip pitch ... 40 0.19
gb|DR016441.1|DR016441 STRS1_10_D09.b1_A034 Shoot tip pitch... 40 0.19
gb|DR016632.1|DR016632 STRS1_11_F06.b1_A034 Shoot tip pitch... 40 0.19
gb|DR016719.1|DR016719 STRS1_11_F06.g1_A034 Shoot tip pitch... 40 0.19
gb|DR017364.1|DR017364 STRS1_15_G06.g1_A034 Shoot tip pitch... 40 0.19
gb|DR017680.1|DR017680 STRS1_17_G03.g1_A034 Shoot tip pitch... 40 0.19
gb|DR017772.1|DR017772 STRS1_18_H11.b1_A034 Shoot tip pitch... 40 0.19
gb|DR017922.1|DR017922 STRS1_19_G12.b1_A034 Shoot tip pitch... 40 0.19
gb|DR018027.1|DR018027 STRS1_20_B11.b1_A034 Shoot tip pitch... 40 0.19
gb|DR018066.1|DR018066 STRS1_20_F10.b1_A034 Shoot tip pitch... 40 0.19
gb|DR018107.1|DR018107 STRS1_20_B11.g1_A034 Shoot tip pitch... 40 0.19
gb|DR018298.1|DR018298 STRS1_22_A01.b1_A034 Shoot tip pitch... 40 0.19
gb|DR018473.1|DR018473 STRS1_23_F11.b1_A034 Shoot tip pitch... 40 0.19
gb|DR018832.1|DR018832 STRS1_26_B09.b2_A034 Shoot tip pitch... 40 0.19
gb|DR018848.1|DR018848 STRS1_26_D07.b2_A034 Shoot tip pitch... 40 0.19
gb|DR018851.1|DR018851 STRS1_26_D10.b2_A034 Shoot tip pitch... 40 0.19
gb|DR018860.1|DR018860 STRS1_26_E10.b2_A034 Shoot tip pitch... 40 0.19
gb|DR018871.1|DR018871 STRS1_26_F11.b2_A034 Shoot tip pitch... 40 0.19
gb|DR018896.1|DR018896 STRS1_26_B09.g1_A034 Shoot tip pitch... 40 0.19
gb|DR018916.1|DR018916 STRS1_26_D10.g1_A034 Shoot tip pitch... 40 0.19
gb|DR018927.1|DR018927 STRS1_26_E10.g1_A034 Shoot tip pitch... 40 0.19
gb|DR018936.1|DR018936 STRS1_26_F11.g1_A034 Shoot tip pitch... 40 0.19
gb|DR019033.1|DR019033 STRS1_27_H12.b1_A034 Shoot tip pitch... 40 0.19
gb|DR019123.1|DR019123 STRS1_28_A03.b2_A034 Shoot tip pitch... 40 0.19
gb|DR019161.1|DR019161 STRS1_28_E06.b2_A034 Shoot tip pitch... 40 0.19
gb|DR019244.1|DR019244 STRS1_28_E06.g1_A034 Shoot tip pitch... 40 0.19
gb|DR019484.1|DR019484 STRS1_30_H05.b1_A034 Shoot tip pitch... 40 0.19
gb|DR019485.1|DR019485 STRS1_30_H06.b1_A034 Shoot tip pitch... 40 0.19
gb|DR019613.1|DR019613 STRS1_31_E12.b1_A034 Shoot tip pitch... 40 0.19
gb|DR020152.1|DR020152 STRS1_35_B01.b1_A034 Shoot tip pitch... 40 0.19
gb|DR020296.1|DR020296 STRS1_36_A05.b1_A034 Shoot tip pitch... 40 0.19
gb|DR020438.1|DR020438 STRS1_37_A11.b1_A034 Shoot tip pitch... 40 0.19
gb|DR020888.1|DR020888 STRS1_40_A03.b1_A034 Shoot tip pitch... 40 0.19
gb|DR020890.1|DR020890 STRS1_40_A05.b1_A034 Shoot tip pitch... 40 0.19
gb|DR021003.1|DR021003 STRS1_40_E09.g1_A034 Shoot tip pitch... 40 0.19
gb|DR021069.1|DR021069 STRS1_42_E01.b1_A034 Shoot tip pitch... 40 0.19
gb|DR021223.1|DR021223 STRS1_43_E10.b1_A034 Shoot tip pitch... 40 0.19
gb|DR021356.1|DR021356 STRS1_44_D01.b1_A034 Shoot tip pitch... 40 0.19
gb|DR021486.1|DR021486 STRS1_45_B02.b1_A034 Shoot tip pitch... 40 0.19
gb|DR021508.1|DR021508 STRS1_45_D06.b1_A034 Shoot tip pitch... 40 0.19
gb|DR021511.1|DR021511 STRS1_45_D11.b1_A034 Shoot tip pitch... 40 0.19
gb|DR021806.1|DR021806 STRS1_47_C01.b1_A034 Shoot tip pitch... 40 0.19
gb|DR021853.1|DR021853 STRS1_47_G10.b1_A034 Shoot tip pitch... 40 0.19
gb|DR021889.1|DR021889 STRS1_47_C01.g1_A034 Shoot tip pitch... 40 0.19
gb|DR021960.1|DR021960 STRS1_48_A10.b1_A034 Shoot tip pitch... 40 0.19
gb|DR022160.1|DR022160 STRS1_49_F07.b1_A034 Shoot tip pitch... 40 0.19
gb|DR022725.1|DR022725 STRS1_53_B12.b1_A034 Shoot tip pitch... 40 0.19
gb|DR022743.1|DR022743 STRS1_53_E01.b1_A034 Shoot tip pitch... 40 0.19
gb|DR022866.1|DR022866 STRS1_54_B05.b1_A034 Shoot tip pitch... 40 0.19
gb|DR023079.1|DR023079 STRS1_55_H04.b1_A034 Shoot tip pitch... 40 0.19
gb|DR023080.1|DR023080 STRS1_55_H05.b1_A034 Shoot tip pitch... 40 0.19
gb|DR023185.1|DR023185 STRS1_56_B07.b1_A034 Shoot tip pitch... 40 0.19
gb|DR023229.1|DR023229 STRS1_56_G03.b1_A034 Shoot tip pitch... 40 0.19
gb|DR023262.1|DR023262 STRS1_56_B02.g1_A034 Shoot tip pitch... 40 0.19
gb|DR023629.1|DR023629 STRS1_59_B01.b1_A034 Shoot tip pitch... 40 0.19
gb|DR023930.1|DR023930 STRS1_61_B02.b1_A034 Shoot tip pitch... 40 0.19
gb|DR023978.1|DR023978 STRS1_61_B02.g1_A034 Shoot tip pitch... 40 0.19
gb|DR024203.1|DR024203 STRS1_63_B05.b1_A034 Shoot tip pitch... 40 0.19
gb|DR024305.1|DR024305 STRS1_64_A11.b1_A034 Shoot tip pitch... 40 0.19
gb|DR024331.1|DR024331 STRS1_64_E04.b1_A034 Shoot tip pitch... 40 0.19
gb|DR024605.1|DR024605 STRS1_66_D02.b1_A034 Shoot tip pitch... 40 0.19
gb|DR024722.1|DR024722 STRS1_67_B12.b1_A034 Shoot tip pitch... 40 0.19
gb|DR024863.1|DR024863 STRS1_68_B11.b1_A034 Shoot tip pitch... 40 0.19
gb|DR025323.1|DR025323 STRS1_71_A03.b1_A034 Shoot tip pitch... 40 0.19
gb|DR025334.1|DR025334 STRS1_71_B05.b1_A034 Shoot tip pitch... 40 0.19
gb|DR025346.1|DR025346 STRS1_71_C08.b1_A034 Shoot tip pitch... 40 0.19
gb|DR025431.1|DR025431 STRS1_71_C08.g1_A034 Shoot tip pitch... 40 0.19
gb|DR050688.1|DR050688 RTBOR1_25_C08.b1_A029 Roots plus add... 40 0.19
gb|DR058029.1|DR058029 RTNIT1_9_F05.b1_A029 Roots minus nit... 40 0.19
gb|DR092386.1|DR092386 STRR1_1_C07.b1_A033 Stem Response Re... 40 0.19
gb|DR092395.1|DR092395 STRR1_1_D07.b1_A033 Stem Response Re... 40 0.19
gb|DR092468.1|DR092468 STRR1_1_C07.g1_A033 Stem Response Re... 40 0.19
gb|DR092480.1|DR092480 STRR1_1_D07.g1_A033 Stem Response Re... 40 0.19
gb|DR092563.1|DR092563 STRR1_2_E06.b1_A033 Stem Response Re... 40 0.19
gb|DR092656.1|DR092656 STRR1_2_G05.g1_A033 Stem Response Re... 40 0.19
gb|DR092858.1|DR092858 STRR1_4_B03.g1_A033 Stem Response Re... 40 0.19
gb|DR093240.1|DR093240 STRR1_7_B03.b1_A033 Stem Response Re... 40 0.19
gb|DR093288.1|DR093288 STRR1_7_G05.b1_A033 Stem Response Re... 40 0.19
gb|DR093315.1|DR093315 STRR1_7_B03.g1_A033 Stem Response Re... 40 0.19
gb|DR093396.1|DR093396 STRR1_8_B06.b1_A033 Stem Response Re... 40 0.19
gb|DR093476.1|DR093476 STRR1_8_B06.g1_A033 Stem Response Re... 40 0.19
gb|DR094071.1|DR094071 STRR1_12_F06.b1_A033 Stem Response R... 40 0.19
gb|DR094151.1|DR094151 STRR1_12_F06.g1_A033 Stem Response R... 40 0.19
gb|DR094241.1|DR094241 STRR1_13_G12.b1_A033 Stem Response R... 40 0.19
gb|DR094357.1|DR094357 STRR1_14_C02.b1_A033 Stem Response R... 40 0.19
gb|DR094430.1|DR094430 STRR1_14_C02.g1_A033 Stem Response R... 40 0.19
gb|DR094567.1|DR094567 STRR1_15_H07.b1_A033 Stem Response R... 40 0.19
gb|DR094652.1|DR094652 STRR1_15_H07.g1_A033 Stem Response R... 40 0.19
gb|DR095372.1|DR095372 STRR1_20_D03.g1_A033 Stem Response R... 40 0.19
gb|DR095444.1|DR095444 STRR1_21_C09.b1_A033 Stem Response R... 40 0.19
gb|DR095447.1|DR095447 STRR1_21_D01.b1_A033 Stem Response R... 40 0.19
gb|DR095483.1|DR095483 STRR1_21_A06.g1_A033 Stem Response R... 40 0.19
gb|DR095690.1|DR095690 STRR1_23_A03.b1_A033 Stem Response R... 40 0.19
gb|DR095855.1|DR095855 STRR1_24_C03.b1_A033 Stem Response R... 40 0.19
gb|DR096180.1|DR096180 STRR1_26_G05.b1_A033 Stem Response R... 40 0.19
gb|DR096439.1|DR096439 STRR1_28_A07.b1_A033 Stem Response R... 40 0.19
gb|DR096461.1|DR096461 STRR1_28_D05.b1_A033 Stem Response R... 40 0.19
gb|DR096997.1|DR096997 STRR1_31_F06.g1_A033 Stem Response R... 40 0.19
gb|DR097165.1|DR097165 STRR1_33_A06.b1_A033 Stem Response R... 40 0.19
gb|DR097237.1|DR097237 STRR1_33_A06.g3_A033 Stem Response R... 40 0.19
gb|DR097386.1|DR097386 STRR1_34_H02.b1_A033 Stem Response R... 40 0.19
gb|DR097507.1|DR097507 STRR1_35_C09.b1_A033 Stem Response R... 40 0.19
gb|DR097633.1|DR097633 STRR1_36_B06.b1_A033 Stem Response R... 40 0.19
gb|DR097646.1|DR097646 STRR1_36_C12.b1_A033 Stem Response R... 40 0.19
gb|DR097707.1|DR097707 STRR1_36_B06.g3_A033 Stem Response R... 40 0.19
gb|DR098312.1|DR098312 STRR1_40_C09.g1_A033 Stem Response R... 40 0.19
gb|DR098363.1|DR098363 STRR1_45_A10.b1_A033 Stem Response R... 40 0.19
gb|DR098386.1|DR098386 STRR1_45_D10.b1_A033 Stem Response R... 40 0.19
gb|DR098958.1|DR098958 STRR1_49_D02.b1_A033 Stem Response R... 40 0.19
gb|DR099265.1|DR099265 STRR1_54_G10.b1_A033 Stem Response R... 40 0.19
gb|DR099272.1|DR099272 STRR1_54_H10.b1_A033 Stem Response R... 40 0.19
gb|DR099527.1|DR099527 STRR1_56_F09.b1_A033 Stem Response R... 40 0.19
gb|DR100054.1|DR100054 STRR1_61_F06.b1_A033 Stem Response R... 40 0.19
gb|DR100135.1|DR100135 STRR1_62_B01.b1_A033 Stem Response R... 40 0.19
gb|DR100299.1|DR100299 STRR1_63_C12.b1_A033 Stem Response R... 40 0.19
gb|DR100573.1|DR100573 STRR1_65_E01.b1_A033 Stem Response R... 40 0.19
gb|DR100888.1|DR100888 STRR1_69_C02.b1_A033 Stem Response R... 40 0.19
gb|DR101052.1|DR101052 STRR1_70_E12.b1_A033 Stem Response R... 40 0.19
gb|DR101312.1|DR101312 STRR1_72_B06.b1_A033 Stem Response R... 40 0.19
gb|DR101360.1|DR101360 STRR1_72_H05.b1_A033 Stem Response R... 40 0.19
gb|DR101421.1|DR101421 STRR1_73_B03.b1_A033 Stem Response R... 40 0.19
gb|DR101454.1|DR101454 STRR1_73_E11.b1_A033 Stem Response R... 40 0.19
gb|DR101473.1|DR101473 STRR1_73_G11.b1_A033 Stem Response R... 40 0.19
gb|DR101573.1|DR101573 STRR1_74_F08.b1_A033 Stem Response R... 40 0.19
gb|DR101766.1|DR101766 STRR1_75_D11.g1_A033 Stem Response R... 40 0.19
gb|DR101970.1|DR101970 STRR1_77_D08.b1_A033 Stem Response R... 40 0.19
gb|DR101973.1|DR101973 STRR1_77_E02.b1_A033 Stem Response R... 40 0.19
gb|DR102162.1|DR102162 STRR1_79_A02.b1_A033 Stem Response R... 40 0.19
gb|DR102167.1|DR102167 STRR1_79_A09.b1_A033 Stem Response R... 40 0.19
gb|DR102465.1|DR102465 STRR1_81_H01.b1_A033 Stem Response R... 40 0.19
gb|DR102556.1|DR102556 STRR1_82_B03.b1_A033 Stem Response R... 40 0.19
gb|DR102680.1|DR102680 STRR1_83_A07.b1_A033 Stem Response R... 40 0.19
gb|DR110031.1|DR110031 RTS1_1_C02.g1_A029 Roots minus sulfu... 40 0.19
gb|DR117003.1|DR117003 RTMG1_4_D06.b1_A029 Roots minus magn... 40 0.19
gb|DR181828.1|DR181828 RTMNUT1_41_F08.b1_A029 Roots minus m... 40 0.19
gb|DT625606.1|DT625606 EST1157530 Sequencing ESTs from lobl... 40 0.19
gb|DT626853.1|DT626853 EST1159929 Sequencing ESTs from lobl... 40 0.19
gb|U51634.1|PPU51634 Pinus palustris type 2 light-harvestin... 40 0.19
>gb|AW011230.1|AW011230 ST18C07 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST18C07, mRNA sequence
Length = 533
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 368 gagtatagaacccagtacgtcagccactgctgatcatcca 329
>gb|AW064721.1|AW064721 ST35A02 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST35A02, mRNA sequence
Length = 566
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 406 gagtatagaacccagtacgtcagccactgctgatcatcca 367
>gb|AW290426.1|AW290426 NXNV020E04F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV020E04 5', mRNA sequence
Length = 325
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 302 gagtatagaacccagtacgtcagccactgctgatcatcca 263
>gb|BX252707.1|BX252707 BX252707 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP069D07 similar to POLYPOSIS LOCUS PROTEIN,
mRNA sequence
Length = 676
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 51 gagtatagaacccagtacgtcagccactgctgatcatcca 12
>gb|BX253213.1|BX253213 BX253213 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP079H01 similar to POLYPOSIS LOCUS PROTEIN,
mRNA sequence
Length = 501
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 217 gagtatagaacccagtacgtcagccactgctgatcatcca 178
>gb|BE187297.1|BE187297 NXNV_162_B12_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_162_B12 5' similar to Arabidopsis thaliana
sequence At1g74520 AtHVA22a see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 574
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 181 gagtatagaacccagtacgtcagccactgctgatcatcca 142
>gb|BG318905.1|BG318905 NXPV_021_C11_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_021_C11 5' similar to Arabidopsis
thaliana sequence At1g74520 AtHVA22a see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 503
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 394 gagtatagaacccagtacgtcagccactgctgatcatcca 355
>gb|BQ699182.1|BQ699182 NXRV120_E07_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV120_E07 5' similar to Arabidopsis thaliana
sequence At1g74520 AtHVA22a see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 524
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 236 gagtatagaacccagtacgtcagccactgctgatcatcca 197
>gb|CD027086.1|CD027086 NXNV020E04 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV020E04 5' similar to Arabidopsis thaliana sequence
At1g74520 AtHVA22a see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 325
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 302 gagtatagaacccagtacgtcagccactgctgatcatcca 263
>gb|CF475707.1|CF475707 RTWW2_11_G10.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_11_G10_A021 5', mRNA sequence
Length = 731
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 662 gagtatagaacccagtacgtcagccactgctgatcatcca 701
>gb|CF672548.1|CF672548 RTCNT1_64_H05.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_64_H05_A029 3', mRNA sequence
Length = 765
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 122 gagtatagaacccagtacgtcagccactgctgatcatcca 83
>gb|CF672623.1|CF672623 RTCNT1_64_H05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_64_H05_A029 5', mRNA sequence
Length = 729
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 274 gagtatagaacccagtacgtcagccactgctgatcatcca 235
>gb|CO160128.1|CO160128 FLD1_19_A03.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_19_A03_A029 3', mRNA sequence
Length = 759
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 143 gagtatagaacccagtacgtcagccactgctgatcatcca 104
>gb|CO160201.1|CO160201 FLD1_19_A03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_19_A03_A029 5', mRNA sequence
Length = 750
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 273 gagtatagaacccagtacgtcagccactgctgatcatcca 234
>gb|CO199374.1|CO199374 GEO1_20_F02.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_20_F02_A029 5', mRNA sequence
Length = 660
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 595 gagtatagaacccagtacgtcagccactgctgatcatcca 634
>gb|CV035712.1|CV035712 RTNACL1_42_A06.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_42_A06_A029 3', mRNA sequence
Length = 822
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 309 gagtatagaacccagtacgtcagccactgctgatcatcca 348
>gb|CV035788.1|CV035788 RTNACL1_42_A06.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_42_A06_A029 5', mRNA sequence
Length = 713
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 548 gagtatagaacccagtacgtcagccactgctgatcatcca 587
>gb|DN609369.1|DN609369 EST962419 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSAAC05, mRNA sequence
Length = 635
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 427 gagtatagaacccagtacgtcagccactgctgatcatcca 388
>gb|DR012508.1|DR012508 HEAT1_13_G02.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_13_G02_A029 3', mRNA sequence
Length = 826
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 214 gagtatagaacccagtacgtcagccactgctgatcatcca 175
>gb|DR012588.1|DR012588 HEAT1_13_G02.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_13_G02_A029 5', mRNA sequence
Length = 722
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 664 gagtatagaacccagtacgtcagccactgctgatcatcca 625
>gb|DR014618.1|DR014618 HEAT1_50_C10.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_50_C10_A029 5', mRNA sequence
Length = 778
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 130 gagtatagaacccagtacgtcagccactgctgatcatcca 91
>gb|DR014767.1|DR014767 HEAT1_51_B06.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_51_B06_A029 5', mRNA sequence
Length = 870
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 361 gagtatagaacccagtacgtcagccactgctgatcatcca 322
>gb|DR017755.1|DR017755 STRS1_18_G04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_18_G04_A034 3', mRNA sequence
Length = 846
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 252 gagtatagaacccagtacgtcagccactgctgatcatcca 213
>gb|DR017840.1|DR017840 STRS1_18_G04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_18_G04_A034 5', mRNA sequence
Length = 718
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 378 gagtatagaacccagtacgtcagccactgctgatcatcca 339
>gb|DR055871.1|DR055871 RTCA1_26_B02.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_26_B02_A029 5', mRNA sequence
Length = 667
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 224 gagtatagaacccagtacgtcagccactgctgatcatcca 185
>gb|DR058638.1|DR058638 RTNIT1_13_B05.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_13_B05_A029 3', mRNA sequence
Length = 659
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 65 gagtatagaacccagtacgtcagccactgctgatcatcca 26
>gb|DR058721.1|DR058721 RTNIT1_13_B05.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_13_B05_A029 5', mRNA sequence
Length = 619
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 409 gagtatagaacccagtacgtcagccactgctgatcatcca 370
>gb|DR089709.1|DR089709 RTAL1_10_G10.b1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_10_G10_A029 3', mRNA sequence
Length = 712
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 99 gagtatagaacccagtacgtcagccactgctgatcatcca 60
>gb|DR089794.1|DR089794 RTAL1_10_G10.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_10_G10_A029 5', mRNA sequence
Length = 665
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 257 gagtatagaacccagtacgtcagccactgctgatcatcca 218
>gb|DR091888.1|DR091888 RTAL1_24_D06.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_24_D06_A029 5', mRNA sequence
Length = 720
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 323 gagtatagaacccagtacgtcagccactgctgatcatcca 284
>gb|DR385882.1|DR385882 RTHG1_11_A07.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_11_A07_A029 5', mRNA sequence
Length = 825
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 328 gagtatagaacccagtacgtcagccactgctgatcatcca 289
>gb|DR682838.1|DR682838 EST1072913 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAC56, mRNA sequence
Length = 895
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 630 gagtatagaacccagtacgtcagccactgctgatcatcca 669
>gb|DR682839.1|DR682839 EST1072914 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAC56 3' end, mRNA sequence
Length = 803
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 729 gagtatagaacccagtacgtcagccactgctgatcatcca 690
>gb|DR683008.1|DR683008 EST1073083 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAD72, mRNA sequence
Length = 831
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 598 gagtatagaacccagtacgtcagccactgctgatcatcca 637
>gb|DR683009.1|DR683009 EST1073084 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAAD72 3' end, mRNA sequence
Length = 687
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 473 gagtatagaacccagtacgtcagccactgctgatcatcca 434
>gb|DR688845.1|DR688845 EST1078931 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWACB29 3' end, mRNA sequence
Length = 846
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 421 gagtatagaacccagtacgtcagccactgctgatcatcca 382
>gb|DR694166.1|DR694166 EST1084256 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAE887 3' end, mRNA sequence
Length = 627
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 270 gagtatagaacccagtacgtcagccactgctgatcatcca 231
>gb|DR744595.1|DR744595 RTCU1_23_C03.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_23_C03_A029 5', mRNA sequence
Length = 599
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 525 gagtatagaacccagtacgtcagccactgctgatcatcca 564
>gb|DT627731.1|DT627731 EST1156480 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PIMCQ04 5' end, mRNA sequence
Length = 638
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 212 gagtatagaacccagtacgtcagccactgctgatcatcca 251
>gb|DT631560.1|DT631560 EST1146491 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMFA13 3' end, mRNA sequence
Length = 800
Score = 48.1 bits (24), Expect = 8e-004
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||||||||||||
Sbjct: 473 gagtatagaacccagtacgtcagccactgctgatcatcca 434
>gb|BX253625.1|BX253625 BX253625 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP086B03 similar to POLYPOSIS LOCUS PROTEIN,
mRNA sequence
Length = 500
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 752 acccagtacgtgagccattgctgatcatcca 782
||||||||||| ||||| |||||||||||||
Sbjct: 402 acccagtacgtcagccactgctgatcatcca 372
>gb|CO367704.1|CO367704 RTK1_36_B04.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_36_B04_A029 3', mRNA sequence
Length = 837
Score = 46.1 bits (23), Expect = 0.003
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 752 acccagtacgtgagccattgctgatcatcca 782
||||||||||| ||||| |||||||||||||
Sbjct: 262 acccagtacgtcagccactgctgatcatcca 292
>gb|CX712484.1|CX712484 RTPQ1_2_G01.g2_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_2_G01_A032 5', mRNA sequence
Length = 903
Score = 46.1 bits (23), Expect = 0.003
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 740 aatgagtacagcacccagtacgtgagccattgctgatcatcca 782
|||||||||||||||||||| || ||||| || || |||||||
Sbjct: 731 aatgagtacagcacccagtaagtaagccactgttggtcatcca 773
>gb|BG039422.1|BG039422 NXSI_098_H06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_098_H06 5' similar to Arabidopsis thaliana
sequence At1g74520 AtHVA22a see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 553
Score = 42.1 bits (21), Expect = 0.049
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||| ||||||||
Sbjct: 424 gagtatagaacccagtacgtcagccactgctnatcatcca 385
>gb|BQ698277.1|BQ698277 NXPV_065_F10_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_065_F10 5' similar to Arabidopsis
thaliana sequence At1g74520 AtHVA22a see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 435
Score = 42.1 bits (21), Expect = 0.049
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| |||| ||||||||
Sbjct: 394 gagtatagaacccagtacgtcagccactgctnatcatcca 355
>gb|DN612441.1|DN612441 EST965491 Subtracted pine embryo library, Lib_B Pinus taeda cDNA
clone PSABF57, mRNA sequence
Length = 265
Score = 42.1 bits (21), Expect = 0.049
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 754 ccagtacgtgagccattgctgatcatcca 782
||||||||| ||||| |||||||||||||
Sbjct: 246 ccagtacgtcagccactgctgatcatcca 218
>gb|BQ107356.1|BQ107356 NXLV092_F12_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV092_F12 5' similar to Arabidopsis thaliana
sequence At1g74520 AtHVA22a see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 560
Score = 40.1 bits (20), Expect = 0.19
Identities = 35/40 (87%)
Strand = Plus / Minus
Query: 743 gagtacagcacccagtacgtgagccattgctgatcatcca 782
||||| || ||||||||||| ||||| || ||||||||||
Sbjct: 278 gagtatagaacccagtacgtcagccactgttgatcatcca 239
>gb|CF478124.1|CF478124 RTWW3_19_B10.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_19_B10_A022 3', mRNA sequence
Length = 538
Score = 40.1 bits (20), Expect = 0.19
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 302 ttcctggcaagtgaagggaa 321
||||||||||||||||||||
Sbjct: 441 ttcctggcaagtgaagggaa 460
>gb|CF672850.1|CF672850 RTCNT1_74_H02.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_74_H02_A029 3', mRNA sequence
Length = 610
Score = 40.1 bits (20), Expect = 0.19
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 302 ttcctggcaagtgaagggaa 321
||||||||||||||||||||
Sbjct: 513 ttcctggcaagtgaagggaa 532
>gb|CN784372.1|CN784372 EST783063 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAK73 5' end, mRNA sequence
Length = 359
Score = 40.1 bits (20), Expect = 0.19
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 302 ttcctggcaagtgaagggaa 321
||||||||||||||||||||
Sbjct: 258 ttcctggcaagtgaagggaa 277
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 135,076
Number of Sequences: 355925
Number of extensions: 135076
Number of successful extensions: 35063
Number of sequences better than 0.5: 260
Number of HSP's better than 0.5 without gapping: 260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34798
Number of HSP's gapped (non-prelim): 265
length of query: 1139
length of database: 217,277,237
effective HSP length: 19
effective length of query: 1120
effective length of database: 210,514,662
effective search space: 235776421440
effective search space used: 235776421440
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)