BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1738959.2.2
(1454 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO169507.1|CO169507 NDL1_7_B11.g1_A029 Needles control P... 272 4e-071
gb|CO166920.1|CO166920 FLD1_65_A12.g1_A029 Root flooded Pin... 270 1e-070
gb|BX676890.1|BX676890 BX676890 RN Pinus pinaster cDNA clon... 244 9e-063
gb|BX254458.1|BX254458 BX254458 Pinus pinaster differenciat... 230 1e-058
gb|CO162913.1|CO162913 FLD1_38_G02.b1_A029 Root flooded Pin... 226 2e-057
gb|CO168770.1|CO168770 NDL1_2_A02.g1_A029 Needles control P... 218 5e-055
gb|CV033955.1|CV033955 RTNACL1_37_D08.g1_A029 Roots plus ad... 210 1e-052
gb|CO166181.1|CO166181 FLD1_59_H09.g1_A029 Root flooded Pin... 208 5e-052
gb|CO200454.1|CO200454 GEO2_7_C04.g1_A032 Root gravitropism... 208 5e-052
gb|CX650089.1|CX650089 COLD1_43_A08.g1_A029 Root cold Pinus... 208 5e-052
gb|CX652868.1|CX652868 COLD1_62_B04.b1_A029 Root cold Pinus... 208 5e-052
gb|DR048707.1|DR048707 RTBOR1_10_E05.g1_A029 Roots plus add... 208 5e-052
gb|DR069271.1|DR069271 RTDK1_6_C04.b1_A029 Roots, dark Pinu... 208 5e-052
gb|DR069574.1|DR069574 RTDK1_8_C04.b1_A029 Roots, dark Pinu... 208 5e-052
gb|DR094453.1|DR094453 STRR1_14_E02.g1_A033 Stem Response R... 208 5e-052
gb|BX252587.1|BX252587 BX252587 Pinus pinaster differenciat... 204 7e-051
gb|BX255109.1|BX255109 BX255109 Pinus pinaster differenciat... 204 7e-051
gb|CO158722.1|CO158722 FLD1_8_G04.g1_A029 Root flooded Pinu... 200 1e-049
gb|BX251375.1|BX251375 BX251375 Pinus pinaster differenciat... 186 2e-045
gb|BX254312.1|BX254312 BX254312 Pinus pinaster differenciat... 186 2e-045
gb|BX254898.1|BX254898 BX254898 Pinus pinaster differenciat... 186 2e-045
gb|BE209115.1|BE209115 NXNV_164_A09_F Nsf Xylem Normal wood... 178 4e-043
gb|CX646143.1|CX646143 COLD1_7_C08.g1_A029 Root cold Pinus ... 178 4e-043
gb|CX713895.1|CX713895 RTPQ1_14_D01.g1_A032 Roots treated w... 178 4e-043
gb|BX254029.1|BX254029 BX254029 Pinus pinaster differenciat... 176 2e-042
gb|AL750350.1|AL750350 AL750350 RN Pinus pinaster cDNA clon... 174 7e-042
gb|DR061070.1|DR061070 RTNIT1_31_H03.g1_A029 Roots minus ni... 170 1e-040
gb|CX650237.1|CX650237 COLD1_44_H04.b1_A029 Root cold Pinus... 168 4e-040
gb|BQ701890.1|BQ701890 NXSI_121_H02_F NXSI (Nsf Xylem Side ... 167 2e-039
gb|CV032365.1|CV032365 RTNACL1_7_D03.g2_A029 Roots plus add... 165 6e-039
gb|AW290603.1|AW290603 NXNV044A08F Nsf Xylem Normal wood Ve... 163 3e-038
gb|BQ695460.1|BQ695460 NXPV_028_G04_F NXPV (Nsf Xylem Plani... 163 3e-038
gb|CD027267.1|CD027267 NXNV044A08 Nsf Xylem Normal wood Ver... 163 3e-038
gb|CF389128.1|CF389128 RTDR2_13_D11.g1_A021 Loblolly pine r... 163 3e-038
gb|CO169434.1|CO169434 NDL1_7_B11.b1_A029 Needles control P... 161 1e-037
gb|BG040600.1|BG040600 NXSI_113_A01_F NXSI (Nsf Xylem Side ... 159 4e-037
gb|BQ696029.1|BQ696029 NXPV_035_F01_F NXPV (Nsf Xylem Plani... 159 4e-037
gb|BQ697176.1|BQ697176 NXPV_050_D09_F NXPV (Nsf Xylem Plani... 159 4e-037
gb|BQ698583.1|BQ698583 NXPV_071_F08_F NXPV (Nsf Xylem Plani... 159 4e-037
gb|BF778456.1|BF778456 NXSI_085_A03_F NXSI (Nsf Xylem Side ... 157 2e-036
gb|BE241113.1|BE241113 NXNV_173_A08_F Nsf Xylem Normal wood... 155 6e-036
gb|CO370420.1|CO370420 RTK1_67_F07.g1_A029 Roots minus pota... 155 6e-036
gb|DT634473.1|DT634473 EST1149404 Normalized pine embryo li... 153 2e-035
gb|BQ695559.1|BQ695559 NXPV_030_A03_F NXPV (Nsf Xylem Plani... 151 1e-034
gb|BE123641.1|BE123641 NXNV_150_B11_F Nsf Xylem Normal wood... 145 6e-033
gb|BX253417.1|BX253417 BX253417 Pinus pinaster differenciat... 141 9e-032
gb|BQ696902.1|BQ696902 NXPV_046_F10_F NXPV (Nsf Xylem Plani... 141 9e-032
gb|BQ697144.1|BQ697144 NXPV_050_A11_F NXPV (Nsf Xylem Plani... 135 6e-030
gb|BF777618.1|BF777618 NXSI_070_F01_F NXSI (Nsf Xylem Side ... 129 3e-028
gb|BG832809.1|BG832809 NXPV_081_A01_F NXPV (Nsf Xylem Plani... 129 3e-028
gb|AI920246.1|AI920246 1776 Pine Lambda Zap Xylem library P... 127 1e-027
gb|BG040768.1|BG040768 NXSI_114_H01_F NXSI (Nsf Xylem Side ... 127 1e-027
gb|BQ701694.1|BQ701694 NXSI_118_E04_F NXSI (Nsf Xylem Side ... 127 1e-027
gb|DR181538.1|DR181538 RTMNUT1_39_B09.g2_A029 Roots minus m... 127 1e-027
gb|CV033876.1|CV033876 RTNACL1_37_D08.b1_A029 Roots plus ad... 121 9e-026
gb|BE123636.1|BE123636 NXNV_150_A12_F Nsf Xylem Normal wood... 119 3e-025
gb|BE582441.1|BE582441 NXCI_033_D07_F NXCI (Nsf Xylem Compr... 119 3e-025
gb|BQ699855.1|BQ699855 NXRV122_E03_F NXRV (Nsf Xylem Root w... 119 3e-025
gb|BQ702273.1|BQ702273 NXSI_126_H01_F NXSI (Nsf Xylem Side ... 115 5e-024
gb|BE582468.1|BE582468 NXCI_033_G07_F NXCI (Nsf Xylem Compr... 113 2e-023
gb|BG319008.1|BG319008 NXPV_022_E04_F NXPV (Nsf Xylem Plani... 113 2e-023
gb|BE996944.1|BE996944 NXCI_102_G11_F NXCI (Nsf Xylem Compr... 111 8e-023
gb|CD022511.1|CD022511 NXPV_058_E01_F NXPV (Nsf Xylem Plani... 111 8e-023
gb|CX646821.1|CX646821 COLD1_11_E12.g1_A029 Root cold Pinus... 105 5e-021
gb|BX254121.1|BX254121 BX254121 Pinus pinaster differenciat... 103 2e-020
gb|DT631983.1|DT631983 EST1146914 Normalized pine embryo li... 96 5e-018
gb|BF186296.1|BF186296 NXCI_135_G02_F NXCI (Nsf Xylem Compr... 94 2e-017
gb|BE209359.1|BE209359 NXNV_166_G11_F Nsf Xylem Normal wood... 92 8e-017
gb|CD021482.1|CD021482 NXNV_145_G07_F Nsf Xylem Normal wood... 92 8e-017
gb|BG317512.1|BG317512 NXPV_002_F10_F NXPV (Nsf Xylem Plani... 90 3e-016
gb|BG319377.1|BG319377 NXPV_027_B04_F NXPV (Nsf Xylem Plani... 90 3e-016
gb|BG526951.1|BG526951 NXPV_057_G05_F NXPV (Nsf Xylem Plani... 90 3e-016
gb|BI202802.1|BI202802 NXPV_090_F11_F NXPV (Nsf Xylem Plani... 90 3e-016
gb|BQ696304.1|BQ696304 NXPV_037_G06_F NXPV (Nsf Xylem Plani... 90 3e-016
gb|BQ696316.1|BQ696316 NXPV_037_H09_F NXPV (Nsf Xylem Plani... 90 3e-016
gb|BQ696619.1|BQ696619 NXPV_043_C09_F NXPV (Nsf Xylem Plani... 90 3e-016
gb|BQ697805.1|BQ697805 NXPV_061_A10_F NXPV (Nsf Xylem Plani... 90 3e-016
gb|BQ700846.1|BQ700846 NXRV112_B12_F NXRV (Nsf Xylem Root w... 90 3e-016
gb|CF479544.1|CF479544 RTWW3_22_G10.g1_A022 Well-watered lo... 90 3e-016
gb|DR079802.1|DR079802 RTFEPL1_17_F12.g1_A029 Roots plus ad... 90 3e-016
gb|DR092788.1|DR092788 STRR1_4_A12.b1_A033 Stem Response Re... 90 3e-016
gb|DR691657.1|DR691657 EST1081744 Normalized pine embryo li... 90 3e-016
gb|DR684272.1|DR684272 EST1074349 Normalized pine embryo li... 88 1e-015
gb|BX254051.1|BX254051 BX254051 Pinus pinaster differenciat... 82 7e-014
gb|BX254580.1|BX254580 BX254580 Pinus pinaster differenciat... 82 7e-014
gb|BX255353.1|BX255353 BX255353 Pinus pinaster differenciat... 82 7e-014
gb|BE644028.1|BE644028 NXCI_053_G03_F NXCI (Nsf Xylem Compr... 82 7e-014
gb|BF186163.1|BF186163 NXCI_133_G06_F NXCI (Nsf Xylem Compr... 82 7e-014
gb|CD024484.1|CD024484 NXRV_043_D06_F NXRV (Nsf Xylem Root ... 82 7e-014
gb|CD024639.1|CD024639 NXRV067_G06_F NXRV (Nsf Xylem Root w... 82 7e-014
gb|BF610263.1|BF610263 NXSI_057_B05_F NXSI (Nsf Xylem Side ... 80 3e-013
gb|BM492831.1|BM492831 NXRV_031_E12_F NXRV (Nsf Xylem Root ... 80 3e-013
gb|DR055465.1|DR055465 RTCA1_23_G10.g2_A029 Roots minus cal... 80 3e-013
gb|BE209218.1|BE209218 NXNV_147_E01_F Nsf Xylem Normal wood... 78 1e-012
gb|BG275186.1|BG275186 NXSI_140_H02_F NXSI (Nsf Xylem Side ... 76 5e-012
gb|BG275851.1|BG275851 NXSI_148_F04_F NXSI (Nsf Xylem Side ... 76 5e-012
gb|BI397899.1|BI397899 NXPV_110_G05_F NXPV (Nsf Xylem Plani... 76 5e-012
gb|BM428535.1|BM428535 NXRV_018_B04_F NXRV (Nsf Xylem Root ... 76 5e-012
gb|BQ654528.1|BQ654528 NXRV081_D12_F NXRV (Nsf Xylem Root w... 76 5e-012
gb|DR049907.1|DR049907 RTBOR1_19_H03.g1_A029 Roots plus add... 76 5e-012
gb|BF518118.1|BF518118 NXSI_035_C02_F NXSI (Nsf Xylem Side ... 74 2e-011
gb|CD024512.1|CD024512 NXRV_044_A01_F NXRV (Nsf Xylem Root ... 74 2e-011
gb|DR072662.1|DR072662 RTDK1_27_F10.g1_A029 Roots, dark Pin... 72 7e-011
gb|BE762261.1|BE762261 NXCI_067_C12_F NXCI (Nsf Xylem Compr... 70 3e-010
gb|BF516887.1|BF516887 NXSI_004_H01_F NXSI (Nsf Xylem Side ... 70 3e-010
gb|BG039073.1|BG039073 NXSI_092_D07_F NXSI (Nsf Xylem Side ... 70 3e-010
gb|BQ697756.1|BQ697756 NXPV_052_E03_F NXPV (Nsf Xylem Plani... 70 3e-010
gb|BQ702592.1|BQ702592 NXSI_130_C11_F NXSI (Nsf Xylem Side ... 70 3e-010
gb|AW784129.1|AW784129 NXNV_103_E03_F Nsf Xylem Normal wood... 68 1e-009
gb|AW758685.1|AW758685 NXNV_085_C06_F Nsf Xylem Normal wood... 66 4e-009
gb|BQ697426.1|BQ697426 NXPV_056_A02_F NXPV (Nsf Xylem Plani... 66 4e-009
gb|BE496383.1|BE496383 NXCI_017_A02_F NXCI (Nsf Xylem Compr... 64 2e-008
gb|CO367783.1|CO367783 RTK1_36_C12.g1_A029 Roots minus pota... 64 2e-008
gb|BE241383.1|BE241383 NXNV_187_E11_F Nsf Xylem Normal wood... 62 7e-008
gb|BF609214.1|BF609214 NXSI_041_F09_F NXSI (Nsf Xylem Side ... 62 7e-008
gb|BX253086.1|BX253086 BX253086 Pinus pinaster differenciat... 58 1e-006
gb|BF060451.1|BF060451 NXCI_115_A07_F NXCI (Nsf Xylem Compr... 58 1e-006
gb|BG040272.1|BG040272 NXSI_110_E01_F NXSI (Nsf Xylem Side ... 58 1e-006
gb|BG275124.1|BG275124 NXSI_140_A10_F NXSI (Nsf Xylem Side ... 58 1e-006
gb|CO168704.1|CO168704 NDL1_2_A02.b1_A029 Needles control P... 58 1e-006
gb|CV036240.1|CV036240 RTNACL1_57_F03.g1_A029 Roots plus ad... 58 1e-006
gb|CX646741.1|CX646741 COLD1_11_E12.b1_A029 Root cold Pinus... 58 1e-006
gb|DR048632.1|DR048632 RTBOR1_10_E05.b1_A029 Roots plus add... 58 1e-006
gb|DR071320.1|DR071320 RTDK1_19_C12.b1_A029 Roots, dark Pin... 58 1e-006
gb|DR688096.1|DR688096 EST1078180 Normalized pine embryo li... 58 1e-006
gb|DR684166.1|DR684166 EST1074243 Normalized pine embryo li... 56 4e-006
gb|DR081469.1|DR081469 RTFEPL1_29_G11.g1_A029 Roots plus ad... 54 2e-005
gb|BF221062.1|BF221062 NXCI_162_H01_F NXCI (Nsf Xylem Compr... 52 7e-005
gb|BF517974.1|BF517974 NXSI_032_D03_F NXSI (Nsf Xylem Side ... 50 3e-004
gb|BQ701212.1|BQ701212 NXSI_023_H02_F NXSI (Nsf Xylem Side ... 50 3e-004
gb|AW888016.1|AW888016 NXNV_105_H05_F Nsf Xylem Normal wood... 48 0.001
gb|BE123815.1|BE123815 NXNV_156_G07_F Nsf Xylem Normal wood... 48 0.001
gb|BF610097.1|BF610097 NXSI_054_F12_F NXSI (Nsf Xylem Side ... 48 0.001
gb|BF777292.1|BF777292 NXSI_067_D10_F NXSI (Nsf Xylem Side ... 48 0.001
gb|CD024098.1|CD024098 NXRV_031_H11_F NXRV (Nsf Xylem Root ... 48 0.001
gb|CD024099.1|CD024099 NXRV_031_H12_F NXRV (Nsf Xylem Root ... 48 0.001
gb|CD024673.1|CD024673 NXRV075_G01_F NXRV (Nsf Xylem Root w... 48 0.001
gb|DT636892.1|DT636892 EST1151823 Normalized pine embryo li... 48 0.001
gb|BE643940.1|BE643940 NXCI_050_D11_F NXCI (Nsf Xylem Compr... 46 0.004
gb|BM427785.1|BM427785 NXRV_003_C06_F NXRV (Nsf Xylem Root ... 46 0.004
gb|CD022555.1|CD022555 NXPV_065_B04_F NXPV (Nsf Xylem Plani... 46 0.004
gb|DR100307.1|DR100307 STRR1_63_E02.b1_A033 Stem Response R... 46 0.004
gb|DR682085.1|DR682085 EST1072160 Normalized pine embryo li... 46 0.004
gb|BQ698037.1|BQ698037 NXPV_063_G11_F NXPV (Nsf Xylem Plani... 44 0.016
gb|AI812552.1|AI812552 12G4 Pine Lambda Zap Xylem library P... 42 0.063
gb|BE643911.1|BE643911 NXCI_048_H08_F NXCI (Nsf Xylem Compr... 42 0.063
gb|BF777810.1|BF777810 NXSI_075_H12_F NXSI (Nsf Xylem Side ... 42 0.063
gb|CO365042.1|CO365042 RTK1_23_G05.b1_A029 Roots minus pota... 42 0.063
gb|CO365130.1|CO365130 RTK1_23_G05.g1_A029 Roots minus pota... 42 0.063
gb|CX648143.1|CX648143 COLD1_26_G01.g1_A029 Root cold Pinus... 42 0.063
gb|CX650015.1|CX650015 COLD1_43_A08.b1_A029 Root cold Pinus... 42 0.063
gb|DR060989.1|DR060989 RTNIT1_31_H03.b1_A029 Roots minus ni... 42 0.063
gb|CD020793.1|CD020793 NXNV_089_E09_F Nsf Xylem Normal wood... 40 0.25
>gb|CO169507.1|CO169507 NDL1_7_B11.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_7_B11_A029 5', mRNA sequence
Length = 801
Score = 272 bits (137), Expect = 4e-071
Identities = 473/585 (80%)
Strand = Plus / Minus
Query: 587 accatcaaccatatcggcgacatagcagaagctcctagtctgtgttcctggcttctggac 646
||||||||||||||| | |||||||||||||| | || ||||||||||| |||||
Sbjct: 784 accatcaaccatatcagaaacatagcagaagcttcgggtttgtgttcctggggcttggac 725
Query: 647 agtaaggggttcgccacgcacagcctgagcaatgaagttgctaacaacacggccatcgtc 706
||| | ||||| || | | ||||||||||| || ||||| |||||||||||||||||
Sbjct: 724 agtcattggttcacctctaagggcctgagcaataaaattgctgacaacacggccatcgtc 665
Query: 707 aatgttcatccttggtccataggtgttgaaaatcctggcaattcggatttcaatgccatg 766
||||||||| | ||| |||||||| || || || | ||||| || ||||| | |||||
Sbjct: 664 aatgttcattcgtggcccataggtattaaatattcgagcaatacgtatttctaacccatg 605
Query: 767 ctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataacagct 826
|||||| || ||||| ||||| || |||||||| |||||||| |||||||||||||||||
Sbjct: 604 ctgcctatggtagtcaaacattagagtctctgcaacacgcttcccctcatcataacagct 545
Query: 827 cctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctcaagcgg 886
|| || ||||||||||| |||||||||||||| | || |||||||||| || || ||
Sbjct: 544 tcttacaccaattgggttgacattgccccagtattcttccttttgaggatgttccagagg 485
Query: 887 atcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctctttgcaag 946
||||||||| ||||||||||||||||| | | |||||| |||||||||||||| |||||
Sbjct: 484 atcaccatatacttcagatgttgatgttagtagaatccttgctccaactctcttagcaag 425
Query: 947 gcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattgtgctt 1006
|| | |||||||| ||||| |||||||| ||||| || ||||| |||||||||| |||
Sbjct: 424 tcctaacatgttcaatgtacctataacattggtctttattgtcttgacaggattgtactt 365
Query: 1007 gtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccacaagaag 1066
|||||| ||||| || || ||||| || || ||||| ||||| ||||| || | || |
Sbjct: 364 gtagaatattggagatgctgggcatgctagatgatatatttgatcaacttctatcagtaa 305
Query: 1067 cggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttcttcag 1126
||||| || |||||||| | || |||||||| |||| ||||||||||| || | |
Sbjct: 304 aggctctgtcacatcatgtctaataagctcaaaatttggatgtccgatccatctcctaat 245
Query: 1127 gttatcttttgaaccagtgaaaaagttatcagcaacaatgacctc 1171
||||| ||||| ||||| || ||||||||| | ||||| |||||
Sbjct: 244 attatcctttgagccagtaaagaagttatcaactacaattacctc 200
>gb|CO166920.1|CO166920 FLD1_65_A12.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_65_A12_A029 5', mRNA sequence
Length = 794
Score = 270 bits (136), Expect = 1e-070
Identities = 385/468 (82%)
Strand = Plus / Minus
Query: 587 accatcaaccatatcggcgacatagcagaagctcctagtctgtgttcctggcttctggac 646
||||||||||||||| | |||||||||||||| | || ||||||||||| |||||
Sbjct: 539 accatcaaccatatcagaaacatagcagaagcttcgggtttgtgttcctggggcttggac 480
Query: 647 agtaaggggttcgccacgcacagcctgagcaatgaagttgctaacaacacggccatcgtc 706
||| | ||||| || | | ||||||||||| || ||||| |||||||||||||||||
Sbjct: 479 agtcattggttcacctctaagggcctgagcaataaaattgctgacaacacggccatcgtc 420
Query: 707 aatgttcatccttggtccataggtgttgaaaatcctggcaattcggatttcaatgccatg 766
||||||||| | ||| |||||||| || || || | ||||| || ||||| | |||||
Sbjct: 419 aatgttcattcgtggcccataggtattaaatattcgagcaatacgtatttctaacccatg 360
Query: 767 ctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataacagct 826
|||||| || ||||| ||||| || |||||||| |||||||| |||||||||||||||||
Sbjct: 359 ctgcctatggtagtcaaacattagagtctctgcaacacgcttcccctcatcataacagct 300
Query: 827 cctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctcaagcgg 886
|| || ||||||||||| |||||||||||||| | || |||||||||| || || ||
Sbjct: 299 tcttacaccaattgggttgacattgccccagtattcttccttttgaggatgttccagagg 240
Query: 887 atcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctctttgcaag 946
||||||||| ||||||||||||||||| | | |||||| |||||||||||||| |||||
Sbjct: 239 atcaccatatacttcagatgttgatgttagtagaatccttgctccaactctcttagcaag 180
Query: 947 gcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattgtgctt 1006
|| | |||||||| ||||| |||||||| ||||| || ||||| |||||||||| |||
Sbjct: 179 tcctaacatgttcaatgtacctataacattggtctttattgtcttgacaggattgtactt 120
Query: 1007 gtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaac 1054
|||||| ||||| || || ||||| || || ||||| ||||| |||||
Sbjct: 119 gtagaatattggagatgctgggcatgctagatgatatatttgatcaac 72
>gb|BX676890.1|BX676890 BX676890 RN Pinus pinaster cDNA clone RN13E08, mRNA sequence
Length = 520
Score = 244 bits (123), Expect = 9e-063
Identities = 401/491 (81%), Gaps = 2/491 (0%)
Strand = Plus / Minus
Query: 669 gcctgagcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccatag 728
||||||||||| || ||||| |||||||||||||||||||||||||| | ||| ||||||
Sbjct: 497 gcctgagcaataaaattgctgacaacacggccatcgtcaatgttcattcgtggcccatag 438
Query: 729 gtgttgaaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatc 788
|| || || || | ||||| |||||||| | ||||||||||| || ||||| |||||
Sbjct: 437 gtattaaatattcgagcaatacggatttctaacccatgctgcctatggtagtcaaacatt 378
Query: 789 agcgtctctgctacacgcttaccctcatcataacagctcctgactccaattgggttaaca 848
|| |||||||| |||||||| ||||||||||||||||| || || ||||||||||| |||
Sbjct: 377 agagtctctgcaacacgcttcccctcatcataacagcttcttacaccaattgggttgaca 318
Query: 849 -ttgccccagtaggcct-cggtttgaggatgctcaagcggatcaccataaacttcagatg 906
||||||||||| | | | |||||||||| || || ||||||||||| ||||||||||
Sbjct: 317 tttgccccagtattcttcctttttgaggatgttccagaggatcaccatatacttcagatg 258
Query: 907 ttgatgtcaacaaaatcctagctccaactctctttgcaaggcccagcatgttcagggtac 966
||||||| | | |||| | |||||||||||||| ||||| || | |||||||| ||||
Sbjct: 257 ttgatgttagtagaatctttgctccaactctcttagcaagtcctaacatgttcaatgtac 198
Query: 967 caataacatttgtcttgatggtcttaacaggattgtgcttgtagaagattggtgaagcag 1026
| |||||||| ||||| || ||||| |||||||||| ||||||||| ||||| || || |
Sbjct: 197 ctataacattggtctttatcgtcttgacaggattgtacttgtagaatattggagatgctg 138
Query: 1027 ggcaagcaaggtgatagatttggtcaacctccacaagaagcggctcggtgacatcatgac 1086
|||| || || ||||| ||||| ||||| || | || | ||||| || |||||||| |
Sbjct: 137 ggcatgctagatgatatatttgatcaacttctatcagtaaaggctctgtcacatcatgtc 78
Query: 1087 ggatgagctcaaatcttgggtgtccgatccacttcttcaggttatcttttgaaccagtga 1146
|| |||||||| |||| ||||||||||| || | | ||||| ||||||||||| |
Sbjct: 77 taataagctcaaaatttggatgtccgatccatctcctaatattatcctttgaaccagtaa 18
Query: 1147 aaaagttatca 1157
| |||||||||
Sbjct: 17 agaagttatca 7
>gb|BX254458.1|BX254458 BX254458 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP098G10 similar to DTDP GLUCOSE 4,6
DEHYDRATASE, mRNA sequence
Length = 695
Score = 230 bits (116), Expect = 1e-058
Identities = 350/428 (81%)
Strand = Plus / Minus
Query: 744 gcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtctctgctaca 803
||||| |||||||| | ||||||||||| || ||||| ||||| || |||||||| |||
Sbjct: 694 gcaatacggatttctaacccatgctgcctatggtagtcaaacattagagtctctgcaaca 635
Query: 804 cgcttaccctcatcataacagctcctgactccaattgggttaacattgccccagtaggcc 863
||||| ||||||||||||||||| || || ||||||||||| |||||||||||||| |
Sbjct: 634 cgcttcccctcatcataacagcttcttacaccaattgggttgacattgccccagtattct 575
Query: 864 tcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtcaacaaaatc 923
|| |||||||||| || || ||||||||||| ||||||||||||||||| | | ||||
Sbjct: 574 tccttttgaggatgttccagaggatcaccatatacttcagatgttgatgttagtagaatc 515
Query: 924 ctagctccaactctctttgcaaggcccagcatgttcagggtaccaataacatttgtcttg 983
|| |||||||||||||| ||||| || | |||||||| ||||| |||||||| |||||
Sbjct: 514 cttgctccaactctcttagcaagtcctaacatgttcaatgtacctataacattggtcttt 455
Query: 984 atggtcttaacaggattgtgcttgtagaagattggtgaagcagggcaagcaaggtgatag 1043
|| ||||| |||||||||| ||||||||| ||||| || || ||||| || || |||||
Sbjct: 454 atcgtcttgacaggattgtacttgtagaatattggagatgctgggcatgctagatgatat 395
Query: 1044 atttggtcaacctccacaagaagcggctcggtgacatcatgacggatgagctcaaatctt 1103
||||| ||||| || | || | ||||| || |||||||| | || |||||||| ||
Sbjct: 394 atttgatcaacttctatcagtaaaggctctgtcacatcatgtctaataagctcaaaattt 335
Query: 1104 gggtgtccgatccacttcttcaggttatcttttgaaccagtgaaaaagttatcagcaaca 1163
|| ||||||||||| || | | ||||| ||||||||||| || ||||||||| | |||
Sbjct: 334 ggatgtccgatccatctcctaatattatcctttgaaccagtaaagaagttatcaactaca 275
Query: 1164 atgacctc 1171
|| |||||
Sbjct: 274 attacctc 267
>gb|CO162913.1|CO162913 FLD1_38_G02.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_38_G02_A029 3', mRNA sequence
Length = 870
Score = 226 bits (114), Expect = 2e-057
Identities = 264/314 (84%)
Strand = Plus / Minus
Query: 669 gcctgagcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccatag 728
||||||||||| || ||||| |||||||||||||||||||||||||| | ||| ||||||
Sbjct: 319 gcctgagcaataaaattgctgacaacacggccatcgtcaatgttcattcgtggcccatag 260
Query: 729 gtgttgaaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatc 788
|| || || || | ||||| || ||||| | ||||||||||| || ||||| |||||
Sbjct: 259 gtattaaatattcgagcaatacgtatttctaacccatgctgcctatggtagtcaaacatt 200
Query: 789 agcgtctctgctacacgcttaccctcatcataacagctcctgactccaattgggttaaca 848
|| |||||||| |||||||| ||||||||||||||||| || || ||||||||||| |||
Sbjct: 199 agagtctctgcaacacgctttccctcatcataacagcttcttacaccaattgggttgaca 140
Query: 849 ttgccccagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgtt 908
||||||||||| | || |||||||||| || || ||||||||||| ||||||||||||
Sbjct: 139 ttgccccagtattcttccttttgaggatgttccagaggatcaccatatacttcagatgtt 80
Query: 909 gatgtcaacaaaatcctagctccaactctctttgcaaggcccagcatgttcagggtacca 968
||||| | | |||||| |||||||||||||| ||||| || | |||||||| |||||
Sbjct: 79 gatgttagtagaatccttgctccaactctcttagcaagtcctaacatgttcaatgtacct 20
Query: 969 ataacatttgtctt 982
|||||||| |||||
Sbjct: 19 ataacattggtctt 6
>gb|CO168770.1|CO168770 NDL1_2_A02.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_2_A02_A029 5', mRNA sequence
Length = 690
Score = 218 bits (110), Expect = 5e-055
Identities = 387/478 (80%), Gaps = 1/478 (0%)
Strand = Plus / Minus
Query: 695 acggccatcgtcaatgttcatccttggtccataggtgttgaaaatcctggcaatt-cgga 753
||||||||||||||||||||| | ||| |||||||| || || || | |||| | || |
Sbjct: 690 acggccatcgtcaatgttcattcgtggcccataggtattaaatattcgagcaaatgcgta 631
Query: 754 tttcaatgccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccct 813
|||| | ||||||||||| || ||||| ||||| || |||||||| |||||||| ||||
Sbjct: 630 tttctaacccatgctgcctatggtagtcaaacattagagtctctgcaacacgcttcccct 571
Query: 814 catcataacagctcctgactccaattgggttaacattgccccagtaggcctcggtttgag 873
|||||||||| || || || ||||||||||| |||||||||||||| | || ||||||
Sbjct: 570 catcataacaacttcttacaccaattgggttgacattgccccagtattcttccttttgag 511
Query: 874 gatgctcaagcggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaa 933
|||| || || ||||||||||| ||||||||||||||||| | | |||||| |||||||
Sbjct: 510 gatgttccagaggatcaccatatacttcagatgttgatgttagtagaatccttgctccaa 451
Query: 934 ctctctttgcaaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaa 993
||||||| ||||| || | |||||||| ||||| |||||||| ||||| || ||||| |
Sbjct: 450 ctctcttagcaagtcctaacatgttcaatgtacctataacattggtctttattgtcttga 391
Query: 994 caggattgtgcttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaa 1053
||||||||| ||||||||| ||||| || || ||||| || || ||||| ||||| ||||
Sbjct: 390 caggattgtacttgtagaatattggagatgctgggcatgctagatgatatatttgatcaa 331
Query: 1054 cctccacaagaagcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccga 1113
| || | || | ||||| || |||||||| | || |||||||| |||| |||||||
Sbjct: 330 cttctatcagtaaaggctctgtcacatcatgtctaataagctcaaaatttggatgtccga 271
Query: 1114 tccacttcttcaggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctc 1171
|||| || | | ||||| ||||| ||||| || ||||||||| | ||||| |||||
Sbjct: 270 tccatctcctaatattatcctttgagccagtaaagaagttatcaactacaattacctc 213
>gb|CV033955.1|CV033955 RTNACL1_37_D08.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_37_D08_A029 5', mRNA sequence
Length = 801
Score = 210 bits (106), Expect = 1e-052
Identities = 334/410 (81%)
Strand = Plus / Minus
Query: 762 ccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataa 821
||||||||||| || ||||| ||||| || |||||||| |||||||| ||||||||||||
Sbjct: 789 ccatgctgcctatggtagtcaaacattagagtctctgcaacacgcttcccctcatcataa 730
Query: 822 cagctcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctca 881
|| || || || ||||||||||| |||||||||||||| | || |||||||||| ||
Sbjct: 729 caacttcttacaccaattgggttgacattgccccagtattcttccttttgaggatgttcc 670
Query: 882 agcggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctcttt 941
|| ||||||||||| ||||||||||||||||| | | |||||| ||||||||||||||
Sbjct: 669 agaggatcaccatatacttcagatgttgatgttagtagaatccttgctccaactctctta 610
Query: 942 gcaaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattg 1001
||||| || | |||||||| ||||| |||||||| ||||| || ||||| |||||||||
Sbjct: 609 gcaagtcctaacatgttcaatgtacctataacattggtctttattgtcttgacaggattg 550
Query: 1002 tgcttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccaca 1061
| ||||||||| ||||| || || ||||| || || ||||| ||||| ||||| || |
Sbjct: 549 tacttgtagaatattggagatgctgggcatgctagatgatatatttgatcaacttctatc 490
Query: 1062 agaagcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttc 1121
|| | ||||| || |||||||| | || |||||||| |||| ||||||||||| ||
Sbjct: 489 agtaaaggctctgtcacatcatgtctaataagctcaaaatttggatgtccgatccatctc 430
Query: 1122 ttcaggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctc 1171
| | ||||| ||||| ||||| || ||||||||| | ||||| |||||
Sbjct: 429 ctaatattatcctttgagccagtaaagaagttatcaactacaattacctc 380
>gb|CO166181.1|CO166181 FLD1_59_H09.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_59_H09_A029 5', mRNA sequence
Length = 812
Score = 208 bits (105), Expect = 5e-052
Identities = 399/497 (80%)
Strand = Plus / Minus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| |||||||||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 551 gcaatgaaattgctaacaacacgtccatcatcaatgttcatgcgaggaccataagtattg 492
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || || | |||||||| ||||||||||| ||||| | ||
Sbjct: 491 aaaattcgagcaatgcgaatctctaaaccatgctgtctgtgatagtcaaacattaatgtt 432
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
||||| |||||||| || |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 431 tctgccacacgctttccttcatcatagcaacttcttactccaatagggttaacattaccc 372
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| ||||||||||| || |||||||| |||||||||||||| |||
Sbjct: 371 caatattcctccttttgtggatgctcaagagggtcaccatagacttcagatgttgaggtc 312
Query: 915 aacaaaatcctagctccaactctctttgcaaggcccagcatgttcagggtaccaataaca 974
|||||||| || || ||||||| ||| ||||| |||| ||| |||| || ||||| ||
Sbjct: 311 aacaaaattcttgcaccaactcgcttggcaagtcccaacatattcaatgtgccaatcacg 252
Query: 975 tttgtcttgatggtcttaacaggattgtgcttgtagaagattggtgaagcagggcaagca 1034
|| ||||| || ||||| |||||||| | || ||||| || ||||| || ||||||||
Sbjct: 251 ttagtctttattgtcttcacaggattatatttatagaatataggtgatgctgggcaagcc 192
Query: 1035 aggtgatagatttggtcaacctccacaagaagcggctcggtgacatcatgacggatgagc 1094
| |||||||| || || || || || | || | ||| || |||||||| || |||||
Sbjct: 191 aaatgatagatctgatccacttctaccaacagggtctcagtcacatcatgccgaatgagt 132
Query: 1095 tcaaatcttgggtgtccgatccacttcttcaggttatcttttgaaccagtgaaaaagtta 1154
||||| |||| || || ||||| ||| | |||||||||||||| |||||||| |||||
Sbjct: 131 tcaaaatttggatgcccaatccatttcctgaggttatcttttgatccagtgaagaagttg 72
Query: 1155 tcagcaacaatgacctc 1171
||||||||||| |||||
Sbjct: 71 tcagcaacaatcacctc 55
Score = 42.1 bits (21), Expect = 0.063
Identities = 102/129 (79%)
Strand = Plus / Minus
Query: 491 ctccttcacattctcagcaagttccagcatggtgaattcacctgggttccccaagttaat 550
|||||||||| ||||| ||||||| ||| |||||||| ||||| ||||| | |||||
Sbjct: 735 ctccttcacagcttcagcgagttccaacattgtgaattctcctggattcccaagattaat 676
Query: 551 cggcccagtgttgtttccattcatcagtctaataagaccatcaaccatatcggcgacata 610
|||||||| || | || | ||| ||||| || || ||||||||||| || | || ||
Sbjct: 675 aggcccagtattctccccttccataagtctgattaggccatcaaccatgtcagaaacgta 616
Query: 611 gcagaagct 619
|||||||||
Sbjct: 615 gcagaagct 607
>gb|CO200454.1|CO200454 GEO2_7_C04.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_7_C04_A032 5', mRNA sequence
Length = 836
Score = 208 bits (105), Expect = 5e-052
Identities = 399/497 (80%)
Strand = Plus / Minus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| |||||||||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 701 gcaatgaaattgctaacaacacgtccatcatcaatgttcatgcgaggaccataagtattg 642
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || || | |||||||| ||||||||||| ||||| | ||
Sbjct: 641 aaaattcgagcaatgcgaatctctaaaccatgctgtctgtgatagtcaaacattaatgtt 582
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
||||| |||||||| || |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 581 tctgccacacgctttccttcatcatagcaacttcttactccaatagggttaacattaccc 522
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| ||||||||||| || |||||||| |||||||||||||| |||
Sbjct: 521 caatattcctccttttgtggatgctcaagagggtcaccatagacttcagatgttgaggtc 462
Query: 915 aacaaaatcctagctccaactctctttgcaaggcccagcatgttcagggtaccaataaca 974
|||||||| || || ||||||| ||| ||||| |||| ||| |||| || ||||| ||
Sbjct: 461 aacaaaattcttgcaccaactcgcttggcaagtcccaacatattcaatgtgccaatcacg 402
Query: 975 tttgtcttgatggtcttaacaggattgtgcttgtagaagattggtgaagcagggcaagca 1034
|| ||||| || ||||| |||||||| | || ||||| || ||||| || ||||||||
Sbjct: 401 ttagtctttattgtcttcacaggattatatttatagaatataggtgatgctgggcaagcc 342
Query: 1035 aggtgatagatttggtcaacctccacaagaagcggctcggtgacatcatgacggatgagc 1094
| |||||||| || || || || || | || | ||| || |||||||| || |||||
Sbjct: 341 aaatgatagatctgatccacttctaccaacagggtctcagtcacatcatgccgaatgagt 282
Query: 1095 tcaaatcttgggtgtccgatccacttcttcaggttatcttttgaaccagtgaaaaagtta 1154
||||| |||| || || ||||| ||| | |||||||||||||| |||||||| |||||
Sbjct: 281 tcaaaatttggatgcccaatccatttcctgaggttatcttttgatccagtgaagaagttg 222
Query: 1155 tcagcaacaatgacctc 1171
||||||||||| |||||
Sbjct: 221 tcagcaacaatcacctc 205
>gb|CX650089.1|CX650089 COLD1_43_A08.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_43_A08_A029 5', mRNA sequence
Length = 784
Score = 208 bits (105), Expect = 5e-052
Identities = 399/497 (80%)
Strand = Plus / Minus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| |||||||||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 780 gcaatgaaattgctaacaacacgtccatcatcaatgttcatgcgaggaccataagtattg 721
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || || | |||||||| ||||||||||| ||||| | ||
Sbjct: 720 aaaattcgagcaatgcgaatctctaaaccatgctgtctgtgatagtcaaacattaatgtt 661
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
||||| |||||||| || |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 660 tctgccacacgctttccttcatcatagcaacttcttactccaatagggttaacattaccc 601
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| ||||||||||| || |||||||| |||||||||||||| |||
Sbjct: 600 caatattcctccttttgtggatgctcaagagggtcaccatagacttcagatgttgaggtc 541
Query: 915 aacaaaatcctagctccaactctctttgcaaggcccagcatgttcagggtaccaataaca 974
|||||||| || || ||||||| ||| ||||| |||| ||| |||| || ||||| ||
Sbjct: 540 aacaaaattcttgcaccaactcgcttggcaagtcccaacatattcaatgtgccaatcacg 481
Query: 975 tttgtcttgatggtcttaacaggattgtgcttgtagaagattggtgaagcagggcaagca 1034
|| ||||| || ||||| |||||||| | || ||||| || ||||| || ||||||||
Sbjct: 480 ttagtctttattgtcttcacaggattatatttatagaatataggtgatgctgggcaagcc 421
Query: 1035 aggtgatagatttggtcaacctccacaagaagcggctcggtgacatcatgacggatgagc 1094
| |||||||| || || || || || | || | ||| || |||||||| || |||||
Sbjct: 420 aaatgatagatctgatccacttctaccaacagggtctcagtcacatcatgccgaatgagt 361
Query: 1095 tcaaatcttgggtgtccgatccacttcttcaggttatcttttgaaccagtgaaaaagtta 1154
||||| |||| || || ||||| ||| | |||||||||||||| |||||||| |||||
Sbjct: 360 tcaaaatttggatgcccaatccatttcctgaggttatcttttgatccagtgaagaagttg 301
Query: 1155 tcagcaacaatgacctc 1171
||||||||||| |||||
Sbjct: 300 tcagcaacaatcacctc 284
>gb|CX652868.1|CX652868 COLD1_62_B04.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_62_B04_A029 3', mRNA sequence
Length = 793
Score = 208 bits (105), Expect = 5e-052
Identities = 399/497 (80%)
Strand = Plus / Plus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| |||||||||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 67 gcaatgaaattgctaacaacacgtccatcatcaatgttcatgcgaggaccataagtattg 126
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || || | |||||||| ||||||||||| ||||| | ||
Sbjct: 127 aaaattcgagcaatgcgaatctctaaaccatgctgtctgtgatagtcaaacattaatgtt 186
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
||||| |||||||| || |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 187 tctgccacacgctttccttcatcatagcaacttcttactccaatagggttaacattaccc 246
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| ||||||||||| || |||||||| |||||||||||||| |||
Sbjct: 247 caatattcctccttttgtggatgctcaagagggtcaccatagacttcagatgttgaggtc 306
Query: 915 aacaaaatcctagctccaactctctttgcaaggcccagcatgttcagggtaccaataaca 974
|||||||| || || ||||||| ||| ||||| |||| ||| |||| || ||||| ||
Sbjct: 307 aacaaaattcttgcaccaactcgcttggcaagtcccaacatattcaatgtgccaatcacg 366
Query: 975 tttgtcttgatggtcttaacaggattgtgcttgtagaagattggtgaagcagggcaagca 1034
|| ||||| || ||||| |||||||| | || ||||| || ||||| || ||||||||
Sbjct: 367 ttagtctttattgtcttcacaggattatatttatagaatataggtgatgctgggcaagcc 426
Query: 1035 aggtgatagatttggtcaacctccacaagaagcggctcggtgacatcatgacggatgagc 1094
| |||||||| || || || || || | || | ||| || |||||||| || |||||
Sbjct: 427 aaatgatagatctgatccacttctaccaacagggtctcagtcacatcatgccgaatgagt 486
Query: 1095 tcaaatcttgggtgtccgatccacttcttcaggttatcttttgaaccagtgaaaaagtta 1154
||||| |||| || || ||||| ||| | |||||||||||||| |||||||| |||||
Sbjct: 487 tcaaaatttggatgcccaatccatttcctgaggttatcttttgatccagtgaagaagttg 546
Query: 1155 tcagcaacaatgacctc 1171
||||||||||| |||||
Sbjct: 547 tcagcaacaatcacctc 563
>gb|DR048707.1|DR048707 RTBOR1_10_E05.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_10_E05_A029 5', mRNA sequence
Length = 774
Score = 208 bits (105), Expect = 5e-052
Identities = 399/497 (80%)
Strand = Plus / Minus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| |||||||||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 519 gcaatgaaattgctaacaacacgtccatcatcaatgttcatgcgaggaccataagtattg 460
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || || | |||||||| ||||||||||| ||||| | ||
Sbjct: 459 aaaattcgagcaatgcgaatctctaaaccatgctgtctgtgatagtcaaacattaatgtt 400
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
||||| |||||||| || |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 399 tctgccacacgctttccttcatcatagcaacttcttactccaatagggttaacattaccc 340
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| ||||||||||| || |||||||| |||||||||||||| |||
Sbjct: 339 caatattcctccttttgtggatgctcaagagggtcaccatagacttcagatgttgaggtc 280
Query: 915 aacaaaatcctagctccaactctctttgcaaggcccagcatgttcagggtaccaataaca 974
|||||||| || || ||||||| ||| ||||| |||| ||| |||| || ||||| ||
Sbjct: 279 aacaaaattcttgcaccaactcgcttggcaagtcccaacatattcaatgtgccaatcacg 220
Query: 975 tttgtcttgatggtcttaacaggattgtgcttgtagaagattggtgaagcagggcaagca 1034
|| ||||| || ||||| |||||||| | || ||||| || ||||| || ||||||||
Sbjct: 219 ttagtctttattgtcttcacaggattatatttatagaatataggtgatgctgggcaagcc 160
Query: 1035 aggtgatagatttggtcaacctccacaagaagcggctcggtgacatcatgacggatgagc 1094
| |||||||| || || || || || | || | ||| || |||||||| || |||||
Sbjct: 159 aaatgatagatctgatccacttctaccaacagggtctcagtcacatcatgccgaatgagt 100
Query: 1095 tcaaatcttgggtgtccgatccacttcttcaggttatcttttgaaccagtgaaaaagtta 1154
||||| |||| || || ||||| ||| | |||||||||||||| |||||||| |||||
Sbjct: 99 tcaaaatttggatgcccaatccatttcctgaggttatcttttgatccagtgaagaagttg 40
Query: 1155 tcagcaacaatgacctc 1171
||||||||||| |||||
Sbjct: 39 tcagcaacaatcacctc 23
Score = 42.1 bits (21), Expect = 0.063
Identities = 102/129 (79%)
Strand = Plus / Minus
Query: 491 ctccttcacattctcagcaagttccagcatggtgaattcacctgggttccccaagttaat 550
|||||||||| ||||| ||||||| ||| |||||||| ||||| ||||| | |||||
Sbjct: 703 ctccttcacagcttcagcgagttccaacattgtgaattctcctggattcccaagattaat 644
Query: 551 cggcccagtgttgtttccattcatcagtctaataagaccatcaaccatatcggcgacata 610
|||||||| || | || | ||| ||||| || || ||||||||||| || | || ||
Sbjct: 643 aggcccagtattctccccttccataagtctgattaggccatcaaccatgtcagaaacgta 584
Query: 611 gcagaagct 619
|||||||||
Sbjct: 583 gcagaagct 575
>gb|DR069271.1|DR069271 RTDK1_6_C04.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_6_C04_A029 3', mRNA sequence
Length = 858
Score = 208 bits (105), Expect = 5e-052
Identities = 399/497 (80%)
Strand = Plus / Plus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| |||||||||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 97 gcaatgaaattgctaacaacacgtccatcatcaatgttcatgcgaggaccataagtattg 156
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || || | |||||||| ||||||||||| ||||| | ||
Sbjct: 157 aaaattcgagcaatgcgaatctctaaaccatgctgtctgtgatagtcaaacattaatgtt 216
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
||||| |||||||| || |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 217 tctgccacacgctttccttcatcatagcaacttcttactccaatagggttaacattaccc 276
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| ||||||||||| || |||||||| |||||||||||||| |||
Sbjct: 277 caatattcctccttttgtggatgctcaagagggtcaccatagacttcagatgttgaggtc 336
Query: 915 aacaaaatcctagctccaactctctttgcaaggcccagcatgttcagggtaccaataaca 974
|||||||| || || ||||||| ||| ||||| |||| ||| |||| || ||||| ||
Sbjct: 337 aacaaaattcttgcaccaactcgcttggcaagtcccaacatattcaatgtgccaatcacg 396
Query: 975 tttgtcttgatggtcttaacaggattgtgcttgtagaagattggtgaagcagggcaagca 1034
|| ||||| || ||||| |||||||| | || ||||| || ||||| || ||||||||
Sbjct: 397 ttagtctttattgtcttcacaggattatatttatagaatataggtgatgctgggcaagcc 456
Query: 1035 aggtgatagatttggtcaacctccacaagaagcggctcggtgacatcatgacggatgagc 1094
| |||||||| || || || || || | || | ||| || |||||||| || |||||
Sbjct: 457 aaatgatagatctgatccacttctaccaacagggtctcagtcacatcatgccgaatgagt 516
Query: 1095 tcaaatcttgggtgtccgatccacttcttcaggttatcttttgaaccagtgaaaaagtta 1154
||||| |||| || || ||||| ||| | |||||||||||||| |||||||| |||||
Sbjct: 517 tcaaaatttggatgcccaatccatttcctgaggttatcttttgatccagtgaagaagttg 576
Query: 1155 tcagcaacaatgacctc 1171
||||||||||| |||||
Sbjct: 577 tcagcaacaatcacctc 593
>gb|DR069574.1|DR069574 RTDK1_8_C04.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_8_C04_A029 3', mRNA sequence
Length = 912
Score = 208 bits (105), Expect = 5e-052
Identities = 399/497 (80%)
Strand = Plus / Plus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| |||||||||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 140 gcaatgaaattgctaacaacacgtccatcatcaatgttcatgcgaggaccataagtattg 199
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || || | |||||||| ||||||||||| ||||| | ||
Sbjct: 200 aaaattcgagcaatgcgaatctctaaaccatgctgtctgtgatagtcaaacattaatgtt 259
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
||||| |||||||| || |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 260 tctgccacacgctttccttcatcatagcaacttcttactccaatagggttaacattaccc 319
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| ||||||||||| || |||||||| |||||||||||||| |||
Sbjct: 320 caatattcctccttttgtggatgctcaagagggtcaccatagacttcagatgttgaggtc 379
Query: 915 aacaaaatcctagctccaactctctttgcaaggcccagcatgttcagggtaccaataaca 974
|||||||| || || ||||||| ||| ||||| |||| ||| |||| || ||||| ||
Sbjct: 380 aacaaaattcttgcaccaactcgcttggcaagtcccaacatattcaatgtgccaatcacg 439
Query: 975 tttgtcttgatggtcttaacaggattgtgcttgtagaagattggtgaagcagggcaagca 1034
|| ||||| || ||||| |||||||| | || ||||| || ||||| || ||||||||
Sbjct: 440 ttagtctttattgtcttcacaggattatatttatagaatataggtgatgctgggcaagcc 499
Query: 1035 aggtgatagatttggtcaacctccacaagaagcggctcggtgacatcatgacggatgagc 1094
| |||||||| || || || || || | || | ||| || |||||||| || |||||
Sbjct: 500 aaatgatagatctgatccacttctaccaacagggtctcagtcacatcatgccgaatgagt 559
Query: 1095 tcaaatcttgggtgtccgatccacttcttcaggttatcttttgaaccagtgaaaaagtta 1154
||||| |||| || || ||||| ||| | |||||||||||||| |||||||| |||||
Sbjct: 560 tcaaaatttggatgcccaatccatttcctgaggttatcttttgatccagtgaagaagttg 619
Query: 1155 tcagcaacaatgacctc 1171
||||||||||| |||||
Sbjct: 620 tcagcaacaatcacctc 636
>gb|DR094453.1|DR094453 STRR1_14_E02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_14_E02_A033 5', mRNA sequence
Length = 862
Score = 208 bits (105), Expect = 5e-052
Identities = 399/497 (80%)
Strand = Plus / Minus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| |||||||||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 657 gcaatgaaattgctaacaacacgtccatcatcaatgttcatgcgaggaccataagtattg 598
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || || | |||||||| ||||||||||| ||||| | ||
Sbjct: 597 aaaattcgagcaatgcgaatctctaaaccatgctgtctgtgatagtcaaacattaatgtt 538
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
||||| |||||||| || |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 537 tctgccacacgctttccttcatcatagcaacttcttactccaatagggttaacattaccc 478
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| ||||||||||| || |||||||| |||||||||||||| |||
Sbjct: 477 caatattcctccttttgtggatgctcaagagggtcaccatagacttcagatgttgaggtc 418
Query: 915 aacaaaatcctagctccaactctctttgcaaggcccagcatgttcagggtaccaataaca 974
|||||||| || || ||||||| ||| ||||| |||| ||| |||| || ||||| ||
Sbjct: 417 aacaaaattcttgcaccaactcgcttggcaagtcccaacatattcaatgtgccaatcacg 358
Query: 975 tttgtcttgatggtcttaacaggattgtgcttgtagaagattggtgaagcagggcaagca 1034
|| ||||| || ||||| |||||||| | || ||||| || ||||| || ||||||||
Sbjct: 357 ttagtctttattgtcttcacaggattatatttatagaatataggtgatgctgggcaagcc 298
Query: 1035 aggtgatagatttggtcaacctccacaagaagcggctcggtgacatcatgacggatgagc 1094
| |||||||| || || || || || | || | ||| || |||||||| || |||||
Sbjct: 297 aaatgatagatctgatccacttctaccaacagggtctcagtcacatcatgccgaatgagt 238
Query: 1095 tcaaatcttgggtgtccgatccacttcttcaggttatcttttgaaccagtgaaaaagtta 1154
||||| |||| || || ||||| ||| | |||||||||||||| |||||||| |||||
Sbjct: 237 tcaaaatttggatgcccaatccatttcctgaggttatcttttgatccagtgaagaagttg 178
Query: 1155 tcagcaacaatgacctc 1171
||||||||||| |||||
Sbjct: 177 tcagcaacaatcacctc 161
Score = 42.1 bits (21), Expect = 0.063
Identities = 102/129 (79%)
Strand = Plus / Minus
Query: 491 ctccttcacattctcagcaagttccagcatggtgaattcacctgggttccccaagttaat 550
|||||||||| ||||| ||||||| ||| |||||||| ||||| ||||| | |||||
Sbjct: 841 ctccttcacagcttcagcgagttccaacattgtgaattctcctggattcccaagattaat 782
Query: 551 cggcccagtgttgtttccattcatcagtctaataagaccatcaaccatatcggcgacata 610
|||||||| || | || | ||| ||||| || || ||||||||||| || | || ||
Sbjct: 781 aggcccagtattctccccttccataagtctgattaggccatcaaccatgtcagaaacgta 722
Query: 611 gcagaagct 619
|||||||||
Sbjct: 721 gcagaagct 713
>gb|BX252587.1|BX252587 BX252587 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP066H03 similar to UDP GLUCOSE 4 EPIMERASE,
mRNA sequence
Length = 701
Score = 204 bits (103), Expect = 7e-051
Identities = 295/359 (82%)
Strand = Plus / Minus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| |||||||||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 439 gcaatgaaattgctaacaacacgtccatcatcaatgttcatgcgaggaccataagtattg 380
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || || | |||||||| ||||||||||| ||||| | ||
Sbjct: 379 aaaattcgagcaatgcgaatctctaaaccatgctgtctgtgatagtcaaacattaatgtt 320
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
||||| |||||||| || |||||||| ||||| || |||||||||||||||||||| |||
Sbjct: 319 tctgccacacgctttccttcatcatagcagcttcttactccaattgggttaacattaccc 260
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| ||||||||||| || |||||||| |||||||||||||| |||
Sbjct: 259 caatattcctccttttgtggatgctcaagagggtcaccatagacttcagatgttgaggtc 200
Query: 915 aacaaaatcctagctccaactctctttgcaaggcccagcatgttcagggtaccaataaca 974
|||||||| || || ||||||| ||| ||||| |||| ||| |||| || ||||| ||
Sbjct: 199 aacaaaattcttgcaccaactcgcttggcaagccccaacatattcaatgtgccaatcacg 140
Query: 975 tttgtcttgatggtcttaacaggattgtgcttgtagaagattggtgaagcagggcaagc 1033
|||||||| || ||||| |||||||| | || |||||||| ||||| || ||||||||
Sbjct: 139 tttgtctttattgtcttcacaggattatatttatagaagataggtgatgctgggcaagc 81
Score = 50.1 bits (25), Expect = 3e-004
Identities = 103/129 (79%)
Strand = Plus / Minus
Query: 491 ctccttcacattctcagcaagttccagcatggtgaattcacctgggttccccaagttaat 550
|||||||||| ||||| ||||||| ||| |||||||| ||||||||||| | |||||
Sbjct: 623 ctccttcacagcttcagcgagttccaacattgtgaattctcctgggttcccaagattaat 564
Query: 551 cggcccagtgttgtttccattcatcagtctaataagaccatcaaccatatcggcgacata 610
|||||||| || | || | ||| ||||| || || ||||||||||| || | || ||
Sbjct: 563 aggcccagtattctccccttccataagtctgattaggccatcaaccatgtcagaaacgta 504
Query: 611 gcagaagct 619
|||||||||
Sbjct: 503 gcagaagct 495
>gb|BX255109.1|BX255109 BX255109 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP111A06 similar to DTDP GLUCOSE 4,6
DEHYDRATASE, mRNA sequence
Length = 473
Score = 204 bits (103), Expect = 7e-051
Identities = 271/327 (82%)
Strand = Plus / Minus
Query: 587 accatcaaccatatcggcgacatagcagaagctcctagtctgtgttcctggcttctggac 646
||||||||||||||| | |||||||||||||| | || ||||||||||| |||||
Sbjct: 335 accatcaaccatatcagaaacatagcagaagcttcgggtttgtgttcctggggcttggac 276
Query: 647 agtaaggggttcgccacgcacagcctgagcaatgaagttgctaacaacacggccatcgtc 706
||| | ||||| || | | ||||||||||| || ||||| |||||||||||||||||
Sbjct: 275 agtcattggttcacctctgagggcctgagcaataaaattgctgacaacacggccatcgtc 216
Query: 707 aatgttcatccttggtccataggtgttgaaaatcctggcaattcggatttcaatgccatg 766
||||||||| | ||| |||||||| || || || | ||||| |||||||| | |||||
Sbjct: 215 aatgttcattcgtggcccataggtattaaatattcgagcaatacggatttctaacccatg 156
Query: 767 ctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataacagct 826
|||||| || ||||| ||||| || |||||||| |||||||| |||||||||||||||||
Sbjct: 155 ctgcctatggtagtcaaacattagagtctctgcaacacgcttcccctcatcataacagct 96
Query: 827 cctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctcaagcgg 886
|| || ||||||||||| |||||||||||||| | || |||||||||| || || ||
Sbjct: 95 tcttacaccaattgggttgacattgccccagtattcttccttttgaggatgttccagagg 36
Query: 887 atcaccataaacttcagatgttgatgt 913
||||||||| |||||||||||||||||
Sbjct: 35 atcaccatatacttcagatgttgatgt 9
>gb|CO158722.1|CO158722 FLD1_8_G04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_8_G04_A029 5', mRNA sequence
Length = 704
Score = 200 bits (101), Expect = 1e-049
Identities = 398/497 (80%)
Strand = Plus / Minus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| |||||||||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 695 gcaatgaaattgctaacaacacgtccatcatcaatgttcatgcgaggaccataagtattg 636
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || || | |||||||| ||||||||||| ||||| | ||
Sbjct: 635 aaaattcgagcaatgcgaatctctaaaccatgctgtctgtgatagtcaaacattaatgtt 576
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
||||| |||||||| || |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 575 tctgccacacgctttccttcatcatagcaacttcttactccaatagggttaacattaccc 516
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| ||||||||||| || |||||||| |||||||||||||| |||
Sbjct: 515 caatattcctccttttgtggatgctcaagagggtcaccatagacttcagatgttgaggtc 456
Query: 915 aacaaaatcctagctccaactctctttgcaaggcccagcatgttcagggtaccaataaca 974
|||||||| || || ||||||| ||| ||||| |||| ||| |||| || ||||| ||
Sbjct: 455 aacaaaattcttgcaccaactcgcttggcaagtcccaacatattcaatgtgccaatcacg 396
Query: 975 tttgtcttgatggtcttaacaggattgtgcttgtagaagattggtgaagcagggcaagca 1034
|| ||||| || ||||| |||||||| | || ||||| || ||||| || ||||||||
Sbjct: 395 ttagtctttattgtcttcacaggattatatttatagaatataggtgatgctgggcaagcc 336
Query: 1035 aggtgatagatttggtcaacctccacaagaagcggctcggtgacatcatgacggatgagc 1094
| |||||||| || || || || || | || | ||| || |||||||| || |||||
Sbjct: 335 aaatgatagatctgatccacttctaccaacagggtctcagtcacatcatgccgaatgagt 276
Query: 1095 tcaaatcttgggtgtccgatccacttcttcaggttatcttttgaaccagtgaaaaagtta 1154
||||| |||| || || ||||| ||| |||||||||||||| |||||||| |||||
Sbjct: 275 tcaaaatttggatgcccaatccatttcaagaggttatcttttgatccagtgaagaagttg 216
Query: 1155 tcagcaacaatgacctc 1171
||||||||||| |||||
Sbjct: 215 tcagcaacaatcacctc 199
>gb|BX251375.1|BX251375 BX251375 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP048G12 similar to UDP GLUCOSE 4 EPIMERASE,
mRNA sequence
Length = 673
Score = 186 bits (94), Expect = 2e-045
Identities = 331/410 (80%)
Strand = Plus / Minus
Query: 762 ccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataa 821
|||||||| ||||||||||| ||||| | || ||||| |||||||| || ||||||||
Sbjct: 648 ccatgctgtctgtgatagtcaaacattaatgtttctgccacacgctttccttcatcatag 589
Query: 822 cagctcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctca 881
||||| || |||||||||||||||||||| ||||| || |||| |||| |||||||||
Sbjct: 588 cagcttcttactccaattgggttaacattaccccaatattcctccttttgtggatgctca 529
Query: 882 agcggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctcttt 941
|| || |||||||| |||||||||||||| ||||||||||| || || ||||||| |||
Sbjct: 528 agagggtcaccatagacttcagatgttgaggtcaacaaaattcttgcaccaactcgcttg 469
Query: 942 gcaaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattg 1001
||||| |||| ||| |||| || ||||| || |||||||| || ||||| ||||||||
Sbjct: 468 gcaagccccaacatattcaatgtgccaatcacgtttgtctttattgtcttcacaggatta 409
Query: 1002 tgcttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccaca 1061
| || |||||||| ||||| || |||||||| | |||||||| || || || || ||
Sbjct: 408 tatttatagaagataggtgatgctgggcaagccaaatgatagatctgatccacttctacc 349
Query: 1062 agaagcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttc 1121
| || | ||| || |||||||| || ||||| ||||| | || || || ||||| |||
Sbjct: 348 aacagagtctcagtcacatcatgccgaatgagttcaaaattcggatgcccaatccatttc 289
Query: 1122 ttcaggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctc 1171
| |||||||||||||| || || || ||||| ||||||||||| |||||
Sbjct: 288 ctgaggttatcttttgatccggtaaagaagttgtcagcaacaatcacctc 239
>gb|BX254312.1|BX254312 BX254312 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP096F02 similar to UDP GLUCOSE 4 EPIMERASE,
mRNA sequence
Length = 647
Score = 186 bits (94), Expect = 2e-045
Identities = 331/410 (80%)
Strand = Plus / Minus
Query: 762 ccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataa 821
|||||||| ||||||||||| ||||| | || ||||| |||||||| || ||||||||
Sbjct: 647 ccatgctgtctgtgatagtcaaacattaatgtttctgccacacgctttccttcatcatag 588
Query: 822 cagctcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctca 881
||||| || |||||||||||||||||||| ||||| || |||| |||| |||||||||
Sbjct: 587 cagcttcttactccaattgggttaacattaccccaatattcctccttttgtggatgctca 528
Query: 882 agcggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctcttt 941
|| || |||||||| |||||||||||||| ||||||||||| || || ||||||| |||
Sbjct: 527 agagggtcaccatagacttcagatgttgaggtcaacaaaattcttgcaccaactcgcttg 468
Query: 942 gcaaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattg 1001
||||| |||| ||| |||| || ||||| || |||||||| || ||||| ||||||||
Sbjct: 467 gcaagccccaacatattcaatgtgccaatcacgtttgtctttattgtcttcacaggatta 408
Query: 1002 tgcttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccaca 1061
| || |||||||| ||||| || |||||||| | |||||||| || || || || ||
Sbjct: 407 tatttatagaagataggtgatgctgggcaagccaaatgatagatctgatccacttctacc 348
Query: 1062 agaagcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttc 1121
| || | ||| || |||||||| || ||||| ||||| | || || || ||||| |||
Sbjct: 347 aacagagtctcagtcacatcatgccgaatgagttcaaaattcggatgcccaatccatttc 288
Query: 1122 ttcaggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctc 1171
| |||||||||||||| || || || ||||| ||||||||||| |||||
Sbjct: 287 ctgaggttatcttttgatccggtaaagaagttgtcagcaacaatcacctc 238
>gb|BX254898.1|BX254898 BX254898 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP107A09 similar to UDP GLUCOSE 4 EPIMERASE,
mRNA sequence
Length = 672
Score = 186 bits (94), Expect = 2e-045
Identities = 331/410 (80%)
Strand = Plus / Minus
Query: 762 ccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataa 821
|||||||| ||||||||||| ||||| | || ||||| |||||||| || ||||||||
Sbjct: 647 ccatgctgtctgtgatagtcaaacattaatgtttctgccacacgctttccttcatcatag 588
Query: 822 cagctcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctca 881
||||| || |||||||||||||||||||| ||||| || |||| |||| |||||||||
Sbjct: 587 cagcttcttactccaattgggttaacattaccccaatattcctccttttgtggatgctca 528
Query: 882 agcggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctcttt 941
|| || |||||||| |||||||||||||| ||||||||||| || || ||||||| |||
Sbjct: 527 agagggtcaccatagacttcagatgttgaggtcaacaaaattcttgcaccaactcgcttg 468
Query: 942 gcaaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattg 1001
||||| |||| ||| |||| || ||||| || |||||||| || ||||| ||||||||
Sbjct: 467 gcaagccccaacatattcaatgtgccaatcacgtttgtctttattgtcttcacaggatta 408
Query: 1002 tgcttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccaca 1061
| || |||||||| ||||| || |||||||| | |||||||| || || || || ||
Sbjct: 407 tatttatagaagataggtgatgctgggcaagccaaatgatagatctgatccacttctacc 348
Query: 1062 agaagcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttc 1121
| || | ||| || |||||||| || ||||| ||||| | || || || ||||| |||
Sbjct: 347 aacagagtctcagtcacatcatgccgaatgagttcaaaattcggatgcccaatccatttc 288
Query: 1122 ttcaggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctc 1171
| |||||||||||||| || || || ||||| ||||||||||| |||||
Sbjct: 287 ctgaggttatcttttgatccggtaaagaagttgtcagcaacaatcacctc 238
>gb|BE209115.1|BE209115 NXNV_164_A09_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV_164_A09 5' similar to Arabidopsis thaliana sequence
At3g46440 dTDP-glucose 4-6-dehydratases-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 597
Score = 178 bits (90), Expect = 4e-043
Identities = 330/410 (80%)
Strand = Plus / Minus
Query: 762 ccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataa 821
|||||||| ||||||||||| ||||| | || ||||| |||||||| || ||||||||
Sbjct: 432 ccatgctgtctgtgatagtcaaacattaatgtttctgccacacgctttccttcatcatag 373
Query: 822 cagctcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctca 881
|| || || |||||||| ||||||||||| ||||| || |||| |||| |||||||||
Sbjct: 372 caacttcttactccaatagggttaacattaccccaatattcctccttttgtggatgctca 313
Query: 882 agcggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctcttt 941
|| || |||||||| |||||||||||||| ||||||||||| || || ||||||| |||
Sbjct: 312 agagggtcaccatagacttcagatgttgaggtcaacaaaattcttgcaccaactcgcttg 253
Query: 942 gcaaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattg 1001
||||| |||| ||| |||| || ||||| || || ||||| || ||||| ||||||||
Sbjct: 252 gcaagtcccaacatattcaatgtgccaatcacgttagtctttattgtcttcacaggatta 193
Query: 1002 tgcttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccaca 1061
| || ||||| || ||||| || |||||||| | |||||||| || || || || ||
Sbjct: 192 tatttatagaatataggtgatgctgggcaagccaaatgatagatctgatccacttctacc 133
Query: 1062 agaagcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttc 1121
| || | ||| || |||||||| || ||||| ||||| |||| || || ||||| |||
Sbjct: 132 aacagggtctcagtcacatcatgccgaatgagttcaaaatttggatgcccaatccatttc 73
Query: 1122 ttcaggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctc 1171
| |||||||||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 72 ctgaggttatcttttgatccagtgaagaagttgtcagcaacaatcacctc 23
>gb|CX646143.1|CX646143 COLD1_7_C08.g1_A029 Root cold Pinus taeda cDNA clone COLD1_7_C08_A029
5', mRNA sequence
Length = 694
Score = 178 bits (90), Expect = 4e-043
Identities = 330/410 (80%)
Strand = Plus / Minus
Query: 762 ccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataa 821
|||||||| ||||||||||| ||||| | || ||||| |||||||| || ||||||||
Sbjct: 635 ccatgctgtctgtgatagtcaaacattaatgtttctgccacacgctttccttcatcatag 576
Query: 822 cagctcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctca 881
|| || || |||||||| ||||||||||| ||||| || |||| |||| |||||||||
Sbjct: 575 caacttcttactccaatagggttaacattaccccaatattcctccttttgtggatgctca 516
Query: 882 agcggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctcttt 941
|| || |||||||| |||||||||||||| ||||||||||| || || ||||||| |||
Sbjct: 515 agagggtcaccatagacttcagatgttgaggtcaacaaaattcttgcaccaactcgcttg 456
Query: 942 gcaaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattg 1001
||||| |||| ||| |||| || ||||| || || ||||| || ||||| ||||||||
Sbjct: 455 gcaagtcccaacatattcaatgtgccaatcacgttagtctttattgtcttcacaggatta 396
Query: 1002 tgcttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccaca 1061
| || ||||| || ||||| || |||||||| | |||||||| || || || || ||
Sbjct: 395 tatttatagaatataggtgatgctgggcaagccaaatgatagatctgatccacttctacc 336
Query: 1062 agaagcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttc 1121
| || | ||| || |||||||| || ||||| ||||| |||| || || ||||| |||
Sbjct: 335 aacagggtctcagtcacatcatgccgaatgagttcaaaatttggatgcccaatccatttc 276
Query: 1122 ttcaggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctc 1171
| |||||||||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 275 ctgaggttatcttttgatccagtgaagaagttgtcagcaacaatcacctc 226
>gb|CX713895.1|CX713895 RTPQ1_14_D01.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_14_D01_A032 5', mRNA sequence
Length = 680
Score = 178 bits (90), Expect = 4e-043
Identities = 330/410 (80%)
Strand = Plus / Minus
Query: 762 ccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataa 821
|||||||| ||||||||||| ||||| | || ||||| |||||||| || ||||||||
Sbjct: 626 ccatgctgtctgtgatagtcaaacattaatgtttctgccacacgctttccttcatcatag 567
Query: 822 cagctcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctca 881
|| || || |||||||| ||||||||||| ||||| || |||| |||| |||||||||
Sbjct: 566 caacttcttactccaatagggttaacattaccccaatattcctccttttgtggatgctca 507
Query: 882 agcggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctcttt 941
|| || |||||||| |||||||||||||| ||||||||||| || || ||||||| |||
Sbjct: 506 agagggtcaccatagacttcagatgttgaggtcaacaaaattcttgcaccaactcgcttg 447
Query: 942 gcaaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattg 1001
||||| |||| ||| |||| || ||||| || || ||||| || ||||| ||||||||
Sbjct: 446 gcaagtcccaacatattcaatgtgccaatcacgttagtctttattgtcttcacaggatta 387
Query: 1002 tgcttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccaca 1061
| || ||||| || ||||| || |||||||| | |||||||| || || || || ||
Sbjct: 386 tatttatagaatataggtgatgctgggcaagccaaatgatagatctgatccacttctacc 327
Query: 1062 agaagcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttc 1121
| || | ||| || |||||||| || ||||| ||||| |||| || || ||||| |||
Sbjct: 326 aacagggtctcagtcacatcatgccgaatgagttcaaaatttggatgcccaatccatttc 267
Query: 1122 ttcaggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctc 1171
| |||||||||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 266 ctgaggttatcttttgatccagtgaagaagttgtcagcaacaatcacctc 217
>gb|BX254029.1|BX254029 BX254029 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP092D07 similar to UDP GLUCOSE 4 EPIMERASE,
mRNA sequence
Length = 691
Score = 176 bits (89), Expect = 2e-042
Identities = 230/277 (83%)
Strand = Plus / Minus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| |||||||||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 278 gcaatgaaattgctaacaacacgtccatcatcaatgttcatgcgaggaccataagtattg 219
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || || | |||||||| ||||||||||| ||||| | ||
Sbjct: 218 aaaattcgagcaatgcgaatctctaaaccatgctgtctgtgatagtcaaacattaatgtt 159
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
||||| |||||||| || |||||||| ||||| || |||||||||||||||||||| |||
Sbjct: 158 tctgccacacgctttccttcatcatagcagcttcttactccaattgggttaacattaccc 99
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| ||||||||||| || |||||||| |||||||||||||| |||
Sbjct: 98 caatattcctccttttgtggatgctcaagagggtcaccatagacttcagatgttgaggtc 39
Query: 915 aacaaaatcctagctccaactctctttgcaaggccca 951
|||||||| || || ||||||| ||| ||||| ||||
Sbjct: 38 aacaaaattcttgcaccaactcgcttggcaagcccca 2
Score = 50.1 bits (25), Expect = 3e-004
Identities = 103/129 (79%)
Strand = Plus / Minus
Query: 491 ctccttcacattctcagcaagttccagcatggtgaattcacctgggttccccaagttaat 550
|||||||||| ||||| ||||||| ||| |||||||| ||||||||||| | |||||
Sbjct: 462 ctccttcacagcttcagcgagttccaacattgtgaattctcctgggttcccaagattaat 403
Query: 551 cggcccagtgttgtttccattcatcagtctaataagaccatcaaccatatcggcgacata 610
|||||||| || | || | ||| ||||| || || ||||||||||| || | || ||
Sbjct: 402 aggcccagtattctccccttccataagtctgattaggccatcaaccatgtcagaaacgta 343
Query: 611 gcagaagct 619
|||||||||
Sbjct: 342 gcagaagct 334
>gb|AL750350.1|AL750350 AL750350 RN Pinus pinaster cDNA clone RN01E02 similar to DTDP-GLUCOSE
4-6-DEHYDRATASE, mRNA sequence
Length = 377
Score = 174 bits (88), Expect = 7e-042
Identities = 277/340 (81%)
Strand = Plus / Minus
Query: 694 cacggccatcgtcaatgttcatccttggtccataggtgttgaaaatcctggcaattcgga 753
|||| ||||| ||||||||||| | || ||||| || |||||||| | ||||| || |
Sbjct: 377 cacgtccatcatcaatgttcatgcgaggaccataagtattgaaaattcgagcaatgcgaa 318
Query: 754 tttcaatgccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccct 813
| || | |||||||| ||||||||||| ||||| | || ||||| |||||||| || |
Sbjct: 317 tctctaaaccatgctgtctgtgatagtcaaacattaatgtttctgccacacgctttcctt 258
Query: 814 catcataacagctcctgactccaattgggttaacattgccccagtaggcctcggtttgag 873
||||||| ||||| || |||||||||||||||||||| ||||| || |||| |||| |
Sbjct: 257 catcatagcagcttcttactccaattgggttaacattaccccaatattcctccttttgtg 198
Query: 874 gatgctcaagcggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaa 933
|||||||||| || |||||||| |||||||||||||| ||||||||||| || || ||||
Sbjct: 197 gatgctcaagagggtcaccatagacttcagatgttgaggtcaacaaaattcttgcaccaa 138
Query: 934 ctctctttgcaaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaa 993
||| ||| ||||| |||| ||| |||| || ||||| || |||||||| || ||||| |
Sbjct: 137 ctcgcttggcaagccccaacatattcaatgtgccaatcacgtttgtctttattgtcttca 78
Query: 994 caggattgtgcttgtagaagattggtgaagcagggcaagc 1033
||||||| | || |||||||| ||||| || ||||||||
Sbjct: 77 caggattatatttatagaagataggtgatgctgggcaagc 38
>gb|DR061070.1|DR061070 RTNIT1_31_H03.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_31_H03_A029 5', mRNA sequence
Length = 683
Score = 170 bits (86), Expect = 1e-040
Identities = 266/326 (81%)
Strand = Plus / Minus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| |||||||||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 326 gcaatgaaattgctaacaacacgtccatcatcaatgttcatgcgaggaccataagtattg 267
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || || | |||||||| ||||||||||| ||||| | ||
Sbjct: 266 aaaattcgagcaatgcgaatctctaaaccatgctgtctgtgatagtcaaacattaatgtt 207
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
||||| |||||||| || |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 206 tctgccacacgctttccttcatcatagcaacttcttactccaatagggttaacattaccc 147
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| ||||||||||| || |||||||| |||||||||||||| |||
Sbjct: 146 caatattcctccttttgtggatgctcaagagggtcaccatagacttcagatgttgaggtc 87
Query: 915 aacaaaatcctagctccaactctctttgcaaggcccagcatgttcagggtaccaataaca 974
|||||||| || || ||||||| ||| ||||| |||| ||| |||| || ||||| ||
Sbjct: 86 aacaaaattcttgcaccaactcgcttggcaagtcccaacatattcaatgtgccaatcacg 27
Query: 975 tttgtcttgatggtcttaacaggatt 1000
|| ||||| || ||||| ||||||||
Sbjct: 26 ttagtctttattgtcttcacaggatt 1
Score = 42.1 bits (21), Expect = 0.063
Identities = 102/129 (79%)
Strand = Plus / Minus
Query: 491 ctccttcacattctcagcaagttccagcatggtgaattcacctgggttccccaagttaat 550
|||||||||| ||||| ||||||| ||| |||||||| ||||| ||||| | |||||
Sbjct: 510 ctccttcacagcttcagcgagttccaacattgtgaattctcctggattcccaagattaat 451
Query: 551 cggcccagtgttgtttccattcatcagtctaataagaccatcaaccatatcggcgacata 610
|||||||| || | || | ||| ||||| || || ||||||||||| || | || ||
Sbjct: 450 aggcccagtattctccccttccataagtctgattaggccatcaaccatgtcagaaacgta 391
Query: 611 gcagaagct 619
|||||||||
Sbjct: 390 gcagaagct 382
>gb|CX650237.1|CX650237 COLD1_44_H04.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_44_H04_A029 3', mRNA sequence
Length = 791
Score = 168 bits (85), Expect = 4e-040
Identities = 331/413 (80%)
Strand = Plus / Minus
Query: 489 aactccttcacattctcagcaagttccagcatggtgaattcacctgggttccccaagtta 548
|||||||||||| ||||||||||||||||| || || || ||||| || || | ||
Sbjct: 413 aactccttcacagcttcagcaagttccagcattgtaaactctcctggatttccaagattt 354
Query: 549 atcggcccagtgttgtttccattcatcagtctaataagaccatcaaccatatcggcgaca 608
|| |||||||| || | ||| | ||| || | ||| | ||||||||||||||| | |||
Sbjct: 353 ataggcccagtattatctccttccattagccgaattaaaccatcaaccatatcagaaaca 294
Query: 609 tagcagaagctcctagtctgtgttcctggcttctggacagtaaggggttcgccacgcaca 668
||||||||||| | || ||||||||||| |||||||| | ||||| || | |
Sbjct: 293 tagcagaagcttcgggtttgtgttcctggggcttggacagtcattggttcacctctaagg 234
Query: 669 gcctgagcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccatag 728
||||||||||| || ||||| |||||||||||||||||||||||||| | ||| ||||||
Sbjct: 233 gcctgagcaataaaattgctgacaacacggccatcgtcaatgttcattcgtggcccatag 174
Query: 729 gtgttgaaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatc 788
|| || || || | ||||| || ||||| | ||||||||||| || ||||| |||||
Sbjct: 173 gtattaaatattcgagcaatgcgtatttctaacccatgctgcctatggtagtcaaacatt 114
Query: 789 agcgtctctgctacacgcttaccctcatcataacagctcctgactccaattgggttaaca 848
|| |||||||| |||||||| |||||||||||||| || || || ||||||||||| |||
Sbjct: 113 agagtctctgcaacacgcttcccctcatcataacaacttcttacaccaattgggttgaca 54
Query: 849 ttgccccagtaggcctcggtttgaggatgctcaagcggatcaccataaacttc 901
||||||||||| | || |||||||||| || || ||||||||||| |||||
Sbjct: 53 ttgccccagtattcttccttttgaggatgttccagaggatcaccatatacttc 1
>gb|BQ701890.1|BQ701890 NXSI_121_H02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_121_H02 5' similar to Arabidopsis thaliana
sequence At3g46440 dTDP-glucose 4-6-dehydratases-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 551
Score = 167 bits (84), Expect = 2e-039
Identities = 328/410 (80%)
Strand = Plus / Minus
Query: 762 ccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataa 821
|||||||| ||||||||||| ||||| | || ||||| |||||||| || ||||||||
Sbjct: 531 ccatgctgtctgtgatagtcaaacattaatgtttctgccacacgctttccttcatcatag 472
Query: 822 cagctcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctca 881
|| || || |||||||| ||||||||||| ||||| || || |||| |||||||||
Sbjct: 471 caacttcttactccaatagggttaacattaccccaatattccnncttttgtggatgctca 412
Query: 882 agcggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctcttt 941
|| || |||||||| |||||||||||||| ||||||||||| || || ||||||| |||
Sbjct: 411 agagggtcaccatagacttcagatgttgaggtcaacaaaattcttgcaccaactcgcttg 352
Query: 942 gcaaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattg 1001
||||| |||| ||| |||| || ||||| || || ||||| || ||||| ||||||||
Sbjct: 351 gcaagtcccaacatattcaatgtgccaatcacgttagtctttattgtcttcacaggatta 292
Query: 1002 tgcttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccaca 1061
| || ||||| || ||||| || |||||||| | |||||||| || || || || ||
Sbjct: 291 tatttatagaatataggtgatgctgggcaagccaaatgatagatctgatccacttctacc 232
Query: 1062 agaagcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttc 1121
| || | ||| || |||||||| || ||||| ||||| |||| || || ||||| |||
Sbjct: 231 aacagggtctcagtcacatcatgccgaatgagttcaaaatttggatgcccaatccatttc 172
Query: 1122 ttcaggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctc 1171
| |||||||||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 171 ctgaggttatcttttgatccagtgaagaagttgtcagcaacaatcacctc 122
>gb|CV032365.1|CV032365 RTNACL1_7_D03.g2_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_7_D03_A029 5', mRNA sequence
Length = 639
Score = 165 bits (83), Expect = 6e-039
Identities = 320/399 (80%)
Strand = Plus / Minus
Query: 773 gtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataacagctcctgac 832
||||||||| ||||| | || ||||| |||||||| || |||||||| || || || ||
Sbjct: 639 gtgatagtcaaacattaatgtttctgccacacgctttccttcatcatagcaacttcttac 580
Query: 833 tccaattgggttaacattgccccagtaggcctcggtttgaggatgctcaagcggatcacc 892
|||||| ||||||||||| ||||| || |||| |||| ||||||||||| || |||||
Sbjct: 579 tccaatagggttaacattaccccaatattcctccttttgtggatgctcaagagggtcacc 520
Query: 893 ataaacttcagatgttgatgtcaacaaaatcctagctccaactctctttgcaaggcccag 952
||| |||||||||||||| ||||||||||| || || ||||||| ||| ||||| ||||
Sbjct: 519 atagacttcagatgttgaggtcaacaaaattcttgcaccaactcgcttggcaagtcccaa 460
Query: 953 catgttcagggtaccaataacatttgtcttgatggtcttaacaggattgtgcttgtagaa 1012
||| |||| || ||||| || || ||||| || ||||| |||||||| | || |||||
Sbjct: 459 catattcaatgtgccaatcacgttagtctttattgtcttcacaggattatatttatagaa 400
Query: 1013 gattggtgaagcagggcaagcaaggtgatagatttggtcaacctccacaagaagcggctc 1072
|| ||||| || |||||||| | |||||||| || || || || || | || | |||
Sbjct: 399 tataggtgatgctgggcaagccaaatgatagatctgatccacttctaccaacagggtctc 340
Query: 1073 ggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttcttcaggttatc 1132
|| |||||||| || ||||| ||||| |||| || || ||||| ||| | ||||||||
Sbjct: 339 agtcacatcatgccgaatgagttcaaaatttggatgcccaatccatttcctgaggttatc 280
Query: 1133 ttttgaaccagtgaaaaagttatcagcaacaatgacctc 1171
|||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 279 ttttgatccagtgaagaagttgtcagcaacaatcacctc 241
>gb|AW290603.1|AW290603 NXNV044A08F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV044A08 5', mRNA sequence
Length = 370
Score = 163 bits (82), Expect = 3e-038
Identities = 235/286 (82%)
Strand = Plus / Minus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| |||||||||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 292 gcaatgaaattgctaacaacacgtccatcatcaatgttcatgcgaggaccataagtattg 233
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || || | |||||||| ||||||||||| ||||| | ||
Sbjct: 232 aaaattcgagcaatgcgaatctctaaaccatgctgtctgtgatagtcaaacattaatgtt 173
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
||||| |||||||| || |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 172 tctgccacacgctttccttcatcatagcaacttcttactccaatagggttaacattaccc 113
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| ||||||||||| || |||||||| |||||||||||||| |||
Sbjct: 112 caatattcctccttttgtggatgctcaagagggtcaccatagacttcagatgttgaggtc 53
Query: 915 aacaaaatcctagctccaactctctttgcaaggcccagcatgttca 960
|||||||| || || ||||||| ||| ||||| |||| ||| ||||
Sbjct: 52 aacaaaattcttgcaccaactcgcttggcaagtcccaacatattca 7
>gb|BQ695460.1|BQ695460 NXPV_028_G04_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_028_G04 5' similar to Arabidopsis
thaliana sequence At3g46440 dTDP-glucose
4-6-dehydratases-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 453
Score = 163 bits (82), Expect = 3e-038
Identities = 322/403 (79%)
Strand = Plus / Minus
Query: 763 catgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataac 822
||||||| ||||||||||| ||||| | || ||||| |||||||| | |||||||| |
Sbjct: 406 catgctgtctgtgatagtcaaacattaatgtttctgccacacgctttcnntcatcatagc 347
Query: 823 agctcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctcaa 882
| || || ||||| || ||||||||||| ||||| || |||| |||| ||||||||||
Sbjct: 346 aacttcttactccnatagggttaacattaccccaatattcctccttttgtggatgctcaa 287
Query: 883 gcggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctctttg 942
| || |||||||| |||||||||||||| ||||||||||| || || ||||||| ||| |
Sbjct: 286 gagggtcaccatagacttcagatgttgaggtcaacaaaattcttgcaccaactcgcttgg 227
Query: 943 caaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattgt 1002
|||| |||| ||| |||| || ||||| || || ||||| || ||||| |||||||| |
Sbjct: 226 caagtcccaacatattcaatgtgccaatcacgttagtctttattgtcttcacaggattat 167
Query: 1003 gcttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccacaa 1062
|| ||||| || ||||| || |||||||| | |||||||| || || || || || |
Sbjct: 166 atttatagaatataggtgatgctgggcaagccaaatgatagatctgatccacttctacca 107
Query: 1063 gaagcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttct 1122
|| | ||| || |||||||| || ||||| ||||| |||| || || ||||| |||
Sbjct: 106 acagggtctcagtcacatcatgccgaatgagttcaaaatttggatgcccaatccatttcc 47
Query: 1123 tcaggttatcttttgaaccagtgaaaaagttatcagcaacaat 1165
| |||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 46 tgaggttatcttttgatccagtgaagaagttgtcagcaacaat 4
>gb|CD027267.1|CD027267 NXNV044A08 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV044A08 5' similar to Arabidopsis thaliana sequence
At2g28760 putative nucleotide-sugar dehydratase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 370
Score = 163 bits (82), Expect = 3e-038
Identities = 235/286 (82%)
Strand = Plus / Minus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| |||||||||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 292 gcaatgaaattgctaacaacacgtccatcatcaatgttcatgcgaggaccataagtattg 233
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || || | |||||||| ||||||||||| ||||| | ||
Sbjct: 232 aaaattcgagcaatgcgaatctctaaaccatgctgtctgtgatagtcaaacattaatgtt 173
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
||||| |||||||| || |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 172 tctgccacacgctttccttcatcatagcaacttcttactccaatagggttaacattaccc 113
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| ||||||||||| || |||||||| |||||||||||||| |||
Sbjct: 112 caatattcctccttttgtggatgctcaagagggtcaccatagacttcagatgttgaggtc 53
Query: 915 aacaaaatcctagctccaactctctttgcaaggcccagcatgttca 960
|||||||| || || ||||||| ||| ||||| |||| ||| ||||
Sbjct: 52 aacaaaattcttgcaccaactcgcttggcaagtcccaacatattca 7
>gb|CF389128.1|CF389128 RTDR2_13_D11.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_13_D11_A021 5', mRNA
sequence
Length = 679
Score = 163 bits (82), Expect = 3e-038
Identities = 235/286 (82%)
Strand = Plus / Minus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| |||||||||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 350 gcaatgaaattgctaacaacacgtccatcatcaatgttcatgcgaggaccataagtattg 291
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || || | |||||||| ||||||||||| ||||| | ||
Sbjct: 290 aaaattcgagcaatgcgaatctctaaaccatgctgtctgtgatagtcaaacattaatgtt 231
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
||||| |||||||| || |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 230 tctgccacacgctttccttcatcatagcaacttcttactccaatagggttaacattaccc 171
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| ||||||||||| || |||||||| |||||||||||||| |||
Sbjct: 170 caatattcctccttttgtggatgctcaagagggtcaccatagacttcagatgttgaggtc 111
Query: 915 aacaaaatcctagctccaactctctttgcaaggcccagcatgttca 960
|||||||| || || ||||||| ||| ||||| |||| ||| ||||
Sbjct: 110 aacaaaattcttgcaccaactcgcttggcaagtcccaacatattca 65
Score = 42.1 bits (21), Expect = 0.063
Identities = 102/129 (79%)
Strand = Plus / Minus
Query: 491 ctccttcacattctcagcaagttccagcatggtgaattcacctgggttccccaagttaat 550
|||||||||| ||||| ||||||| ||| |||||||| ||||| ||||| | |||||
Sbjct: 534 ctccttcacagcttcagcgagttccaacattgtgaattctcctggattcccaagattaat 475
Query: 551 cggcccagtgttgtttccattcatcagtctaataagaccatcaaccatatcggcgacata 610
|||||||| || | || | ||| ||||| || || ||||||||||| || | || ||
Sbjct: 474 aggcccagtattctccccttccataagtctgattaggccatcaaccatgtcagaaacgta 415
Query: 611 gcagaagct 619
|||||||||
Sbjct: 414 gcagaagct 406
>gb|CO169434.1|CO169434 NDL1_7_B11.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_7_B11_A029 3', mRNA sequence
Length = 729
Score = 161 bits (81), Expect = 1e-037
Identities = 225/273 (82%)
Strand = Plus / Minus
Query: 587 accatcaaccatatcggcgacatagcagaagctcctagtctgtgttcctggcttctggac 646
||||||||||||||| | |||||||||||||| | || ||||||||||| |||||
Sbjct: 279 accatcaaccatatcagaaacatagcagaagcttcgggtttgtgttcctggggcttggac 220
Query: 647 agtaaggggttcgccacgcacagcctgagcaatgaagttgctaacaacacggccatcgtc 706
||| | ||||| || | | ||||||||||| || ||||| |||||||||||||||||
Sbjct: 219 agtcattggttcacctctaagggcctgagcaataaaattgctgacaacacggccatcgtc 160
Query: 707 aatgttcatccttggtccataggtgttgaaaatcctggcaattcggatttcaatgccatg 766
||||||||| | ||| |||||||| || || || | ||||| || ||||| | |||||
Sbjct: 159 aatgttcattcgtggcccataggtattaaatattcgagcaatacgtatttctaacccatg 100
Query: 767 ctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataacagct 826
|||||| || ||||| ||||| || |||||||| |||||||| |||||||||||||||||
Sbjct: 99 ctgcctatggtagtcaaacattagagtctctgcaacacgcttcccctcatcataacagct 40
Query: 827 cctgactccaattgggttaacattgccccagta 859
|| || ||||||||||| ||||||||||||||
Sbjct: 39 tcttacaccaattgggttgacattgccccagta 7
>gb|BG040600.1|BG040600 NXSI_113_A01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_113_A01 5' similar to Arabidopsis thaliana
sequence At5g59290 dTDP-glucose 4-6-dehydratase - like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 464
Score = 159 bits (80), Expect = 4e-037
Identities = 224/272 (82%)
Strand = Plus / Minus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| |||||||||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 274 gcaatgaaattgctaacaacacgtccatcatcaatgttcatgcgaggaccataagtattg 215
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || || | |||||||| ||||||||||| ||||| | ||
Sbjct: 214 aaaattcgagcaatgcgaatctctaaaccatgctgtctgtgatagtcaaacattaatgtt 155
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
||||| |||||||| || |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 154 tctgccacacgctttccttcatcatagcaacttcttactccaatagggttaacattaccc 95
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| ||||||||||| || |||||||| |||||||||||||| |||
Sbjct: 94 caatattcctccttttgtggatgctcaagagggtcaccatagacttcagatgttgaggtc 35
Query: 915 aacaaaatcctagctccaactctctttgcaag 946
|||||||| || || ||||||| ||| |||||
Sbjct: 34 aacaaaattcttgcaccaactcgcttggcaag 3
>gb|BQ696029.1|BQ696029 NXPV_035_F01_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_035_F01 5' similar to Arabidopsis
thaliana sequence At3g46440 dTDP-glucose
4-6-dehydratases-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 536
Score = 159 bits (80), Expect = 4e-037
Identities = 224/272 (82%)
Strand = Plus / Minus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| |||||||||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 272 gcaatgaaattgctaacaacacgtccatcatcaatgttcatgcgaggaccataagtattg 213
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || || | |||||||| ||||||||||| ||||| | ||
Sbjct: 212 aaaattcgagcaatgcgaatctctaaaccatgctgtctgtgatagtcaaacattaatgtt 153
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
||||| |||||||| || |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 152 tctgccacacgctttccttcatcatagcaacttcttactccaatagggttaacattaccc 93
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| ||||||||||| || |||||||| |||||||||||||| |||
Sbjct: 92 caatattcctccttttgtggatgctcaagagggtcaccatagacttcagatgttgaggtc 33
Query: 915 aacaaaatcctagctccaactctctttgcaag 946
|||||||| || || ||||||| ||| |||||
Sbjct: 32 aacaaaattcttgcaccaactcgcttggcaag 1
>gb|BQ697176.1|BQ697176 NXPV_050_D09_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_050_D09 5' similar to Arabidopsis
thaliana sequence At5g59290 dTDP-glucose 4-6-dehydratase
- like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 437
Score = 159 bits (80), Expect = 4e-037
Identities = 224/272 (82%)
Strand = Plus / Minus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| |||||||||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 272 gcaatgaaattgctaacaacacgtccatcatcaatgttcatgcgaggaccataagtattg 213
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || || | |||||||| ||||||||||| ||||| | ||
Sbjct: 212 aaaattcgagcaatgcgaatctctaaaccatgctgtctgtgatagtcaaacattaatgtt 153
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
||||| |||||||| || |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 152 tctgccacacgctttccttcatcatagcaacttcttactccaatagggttaacattaccc 93
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| ||||||||||| || |||||||| |||||||||||||| |||
Sbjct: 92 caatattcctccttttgtggatgctcaagagggtcaccatagacttcagatgttgaggtc 33
Query: 915 aacaaaatcctagctccaactctctttgcaag 946
|||||||| || || ||||||| ||| |||||
Sbjct: 32 aacaaaattcttgcaccaactcgcttggcaag 1
>gb|BQ698583.1|BQ698583 NXPV_071_F08_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_071_F08 5' similar to Arabidopsis
thaliana sequence At5g59290 dTDP-glucose 4-6-dehydratase
- like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 516
Score = 159 bits (80), Expect = 4e-037
Identities = 224/272 (82%)
Strand = Plus / Minus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| |||||||||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 272 gcaatgaaattgctaacaacacgtccatcatcaatgttcatgcgaggaccataagtattg 213
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || || | |||||||| ||||||||||| ||||| | ||
Sbjct: 212 aaaattcgagcaatgcgaatctctaaaccatgctgtctgtgatagtcaaacattaatgtt 153
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
||||| |||||||| || |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 152 tctgccacacgctttccttcatcatagcaacttcttactccaatagggttaacattaccc 93
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| ||||||||||| || |||||||| |||||||||||||| |||
Sbjct: 92 caatattcctccttttgtggatgctcaagagggtcaccatagacttcagatgttgaggtc 33
Query: 915 aacaaaatcctagctccaactctctttgcaag 946
|||||||| || || ||||||| ||| |||||
Sbjct: 32 aacaaaattcttgcaccaactcgcttggcaag 1
>gb|BF778456.1|BF778456 NXSI_085_A03_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_085_A03 5' similar to Arabidopsis thaliana
sequence At3g46440 dTDP-glucose 4-6-dehydratases-like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 415
Score = 157 bits (79), Expect = 2e-036
Identities = 325/408 (79%)
Strand = Plus / Minus
Query: 764 atgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataaca 823
|||||| ||||||||||| ||||| | || || || |||||||| |||||||| ||
Sbjct: 415 atgctgtctgtgatagtcaaacattaatgtttcngccacacgctttnnttcatcatagca 356
Query: 824 gctcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctcaag 883
|| || |||||||| ||||||||||| ||||| || |||| |||| |||||||||||
Sbjct: 355 acttcttactccaatagggttaacattaccccaatattcctccttttgtggatgctcaag 296
Query: 884 cggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctctttgc 943
|| |||||||| |||||||||||||| ||||||||||| || || ||||||| ||| ||
Sbjct: 295 agggtcaccatagacttcagatgttgaggtcaacaaaattcttgcaccaactcgcttggc 236
Query: 944 aaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattgtg 1003
||| |||| ||| |||| || ||||| || || ||||| || ||||| |||||||| |
Sbjct: 235 aagtcccaacatattcaatgtgccaatcacgttagtctttattgtcttcacaggattata 176
Query: 1004 cttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccacaag 1063
|| ||||| || ||||| || |||||||| | |||||||| || || || || || |
Sbjct: 175 tttatagaatataggtgatgctgggcaagccaaatgatagatctgatccacttctaccaa 116
Query: 1064 aagcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttctt 1123
|| | ||| || |||||||| || ||||| ||||| |||| || || ||||| ||| |
Sbjct: 115 cagggtctcagtcacatcatgccgaatgagttcaaaatttggatgcccaatccatttcct 56
Query: 1124 caggttatcttttgaaccagtgaaaaagttatcagcaacaatgacctc 1171
|||||||||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 55 gaggttatcttttgatccagtgaagaagttgtcagcaacaatcacctc 8
>gb|BE241113.1|BE241113 NXNV_173_A08_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_173_A08 5' similar to Arabidopsis thaliana
sequence At5g59290 dTDP-glucose 4-6-dehydratase - like
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 526
Score = 155 bits (78), Expect = 6e-036
Identities = 216/262 (82%)
Strand = Plus / Minus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| |||||||||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 263 gcaatgaaattgctaacaacacgtccatcatcaatgttcatgcgaggaccataagtattg 204
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || || | |||||||| ||||||||||| ||||| | ||
Sbjct: 203 aaaattcgagcaatgcgaatctctaaaccatgctgtctgtgatagtcaaacattaatgtt 144
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
||||| |||||||| || |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 143 tctgccacacgctttccttcatcatagcaacttcttactccaatagggttaacattaccc 84
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| ||||||||||| || |||||||| |||||||||||||| |||
Sbjct: 83 caatattcctccttttgtggatgctcaagagggtcaccatagacttcagatgttgaggtc 24
Query: 915 aacaaaatcctagctccaactc 936
|||||||| || || |||||||
Sbjct: 23 aacaaaattcttgcaccaactc 2
Score = 40.1 bits (20), Expect = 0.25
Identities = 92/116 (79%)
Strand = Plus / Minus
Query: 504 tcagcaagttccagcatggtgaattcacctgggttccccaagttaatcggcccagtgttg 563
||||| ||||||| ||| |||||||| ||||| ||||| | ||||| |||||||| ||
Sbjct: 434 tcagcgagttccaacattgtgaattctcctggattcccaagattaataggcccagtattc 375
Query: 564 tttccattcatcagtctaataagaccatcaaccatatcggcgacatagcagaagct 619
| || | ||| ||||| || || ||||||||||| || | || |||||||||||
Sbjct: 374 tccccttccataagtctgattaggccatcaaccatgtcagaaacgtagcagaagct 319
>gb|CO370420.1|CO370420 RTK1_67_F07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_67_F07_A029 5', mRNA sequence
Length = 734
Score = 155 bits (78), Expect = 6e-036
Identities = 216/262 (82%)
Strand = Plus / Minus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| |||||||||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 284 gcaatgaaattgctaacaacacgtccatcatcaatgttcatgcgaggaccataagtattg 225
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || || | |||||||| ||||||||||| ||||| | ||
Sbjct: 224 aaaattcgagcaatgcgaatctctaaaccatgctgtctgtgatagtcaaacattaatgtt 165
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
||||| |||||||| || |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 164 tctgccacacgctttccttcatcatagcaacttcttactccaatagggttaacattaccc 105
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| ||||||||||| || |||||||| |||||||||||||| |||
Sbjct: 104 caatattcctccttttgtggatgctcaagagggtcaccatagacttcagatgttgaggtc 45
Query: 915 aacaaaatcctagctccaactc 936
|||||||| || || |||||||
Sbjct: 44 aacaaaattcttgcaccaactc 23
Score = 42.1 bits (21), Expect = 0.063
Identities = 102/129 (79%)
Strand = Plus / Minus
Query: 491 ctccttcacattctcagcaagttccagcatggtgaattcacctgggttccccaagttaat 550
|||||||||| ||||| ||||||| ||| |||||||| ||||| ||||| | |||||
Sbjct: 468 ctccttcacagcttcagcgagttccaacattgtgaattctcctggattcccaagattaat 409
Query: 551 cggcccagtgttgtttccattcatcagtctaataagaccatcaaccatatcggcgacata 610
|||||||| || | || | ||| ||||| || || ||||||||||| || | || ||
Sbjct: 408 aggcccagtattctccccttccataagtctgattaggccatcaaccatgtcagaaacgta 349
Query: 611 gcagaagct 619
|||||||||
Sbjct: 348 gcagaagct 340
>gb|DT634473.1|DT634473 EST1149404 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG636 3' end, mRNA sequence
Length = 624
Score = 153 bits (77), Expect = 2e-035
Identities = 263/325 (80%)
Strand = Plus / Minus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| |||||||||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 333 gcaatgaaattgctaacaacacgtccatcatcaatgttcatgcgaggaccataagtattg 274
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || || | |||||||| ||||||||||| ||||| | ||
Sbjct: 273 aaaattcgagcaatgcgaatctctaaaccatgctgtctgtgatagtcaaacattaatgtt 214
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
| ||| |||||||| || |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 213 tatgccacacgctttccttcatcatagcaacttcttactccaatagggttaacattaccc 154
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| |||||||||| || |||||||| |||||||||||||| |||
Sbjct: 153 caatattcctccttttgtagatgctcaagagggtcaccatagacttcagatgttgaggtc 94
Query: 915 aacaaaatcctagctccaactctctttgcaaggcccagcatgttcagggtaccaataaca 974
|||||||| || || ||||||| ||| ||||| |||| ||| |||| || ||||| ||
Sbjct: 93 aacaaaattcttgcaccaactcgcttggcaagtcccaacatattcaatgtgccaatcacg 34
Query: 975 tttgtcttgatggtcttaacaggat 999
|| ||||| || ||||| |||||||
Sbjct: 33 ttagtctttattgtcttcacaggat 9
Score = 42.1 bits (21), Expect = 0.063
Identities = 102/129 (79%)
Strand = Plus / Minus
Query: 491 ctccttcacattctcagcaagttccagcatggtgaattcacctgggttccccaagttaat 550
|||||||||| ||||| ||||||| ||| |||||||| ||||| ||||| | |||||
Sbjct: 517 ctccttcacagcttcagcgagttccaacattgtgaattctcctggattcccaagattaat 458
Query: 551 cggcccagtgttgtttccattcatcagtctaataagaccatcaaccatatcggcgacata 610
|||||||| || | || | ||| ||||| || || ||||||||||| || | || ||
Sbjct: 457 aggcccagtattctccccttccataagtctgattaggccatcaaccatgtcagaaacgta 398
Query: 611 gcagaagct 619
|||||||||
Sbjct: 397 gcagaagct 389
>gb|BQ695559.1|BQ695559 NXPV_030_A03_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_030_A03 5' similar to Arabidopsis
thaliana sequence At5g59290 dTDP-glucose 4-6-dehydratase
- like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 399
Score = 151 bits (76), Expect = 1e-034
Identities = 223/272 (81%)
Strand = Plus / Minus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| |||||||||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 272 gcaatgaaattgctaacaacacgtccatcatcaatgttcatgcgaggaccataagtattg 213
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || || | |||||||| ||||||||||| ||||| | ||
Sbjct: 212 aaaattcgagcaatgcgaatctctaaaccatgctgtctgtgatagtcaaacattaatgtt 153
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
||||| |||||||| | |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 152 tctgccacacgctttcattcatcatagcaacttcttactccaatagggttaacattaccc 93
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| ||||||||||| || |||||||| |||||||||||||| |||
Sbjct: 92 caatattcctccttttgtggatgctcaagagggtcaccatagacttcagatgttgaggtc 33
Query: 915 aacaaaatcctagctccaactctctttgcaag 946
|||||||| || || ||||||| ||| |||||
Sbjct: 32 aacaaaattcttgcaccaactcgcttggcaag 1
>gb|BE123641.1|BE123641 NXNV_150_B11_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_150_B11 5' similar to Arabidopsis thaliana
sequence At2g28760 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 310
Score = 145 bits (73), Expect = 6e-033
Identities = 225/277 (81%)
Strand = Plus / Minus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| |||||||||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 278 gcaatgaaattgctaacaacacgtccatcatcaatgttcatgcgaggaccataagtattg 219
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || | | |||||||| ||||||||||| ||||| | ||
Sbjct: 218 aaaattcgagcaatgcgaatcnctaaaccatgctgtctgtgatagtcaaacattaatgtt 159
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
||||| |||||||| |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 158 tctgccacacgctttnnntcatcatagcaacttcttactccaatagggttaacattaccc 99
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| ||||||||||| || |||||||| |||||||||||||| |||
Sbjct: 98 caatattcctccttttgtggatgctcaagagggtcaccatagacttcagatgttgaggtc 39
Query: 915 aacaaaatcctagctccaactctctttgcaaggccca 951
|||||||| || || ||||||| ||| ||||| ||||
Sbjct: 38 aacaaaattcttgcaccaactcgcttggcaagtccca 2
>gb|BX253417.1|BX253417 BX253417 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP083C06a, mRNA sequence
Length = 317
Score = 141 bits (71), Expect = 9e-032
Identities = 161/191 (84%)
Strand = Plus / Minus
Query: 669 gcctgagcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccatag 728
||||||||||| || ||||| |||||||||||||||||||||||||| | ||| ||||||
Sbjct: 220 gcctgagcaataaaattgctgacaacacggccatcgtcaatgttcattcgtggcccatag 161
Query: 729 gtgttgaaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatc 788
|| || || || | ||||| ||||||| | ||||||||||| || ||||| |||||
Sbjct: 160 gtattaaatattcgagcaatacggatttttaacccatgctgcctatggtagtcaaacatt 101
Query: 789 agcgtctctgctacacgcttaccctcatcataacagctcctgactccaattgggttaaca 848
|| |||| ||| |||||||| ||||||||||||||||| | || ||||||||||| |||
Sbjct: 100 agagtctttgcaacacgcttcccctcatcataacagctttttacaccaattgggttgaca 41
Query: 849 ttgccccagta 859
|||||||||||
Sbjct: 40 ttgccccagta 30
>gb|BQ696902.1|BQ696902 NXPV_046_F10_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_046_F10 5' similar to Arabidopsis
thaliana sequence At2g28760 putative nucleotide-sugar
dehydratase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 339
Score = 141 bits (71), Expect = 9e-032
Identities = 221/272 (81%)
Strand = Plus / Minus
Query: 675 gcaatgaagttgctaacaacacggccatcgtcaatgttcatccttggtccataggtgttg 734
|||||||| ||| | ||||||| ||||| ||||||||||| | || ||||| || |||
Sbjct: 272 gcaatgaaattgntnncaacacgtccatcatcaatgttcatgcgaggaccataagtattg 213
Query: 735 aaaatcctggcaattcggatttcaatgccatgctgcctgtgatagtcgaacatcagcgtc 794
||||| | ||||| || || || | |||||||| ||||||||||| ||||| | ||
Sbjct: 212 aaaattcgagcaatgcgaatctctaaaccatgctgtctgtgatagtcaaacattaatgtt 153
Query: 795 tctgctacacgcttaccctcatcataacagctcctgactccaattgggttaacattgccc 854
||||| |||||||| || |||||||| || || || |||||||| ||||||||||| |||
Sbjct: 152 tctgccacacgctttccttcatcatagcaacttcttactccaatagggttaacattaccc 93
Query: 855 cagtaggcctcggtttgaggatgctcaagcggatcaccataaacttcagatgttgatgtc 914
|| || |||| |||| ||||||||||| || |||||||| |||||||||||||| |||
Sbjct: 92 caatattcctccttttgtggatgctcaagagggtcaccatagacttcagatgttgaggtc 33
Query: 915 aacaaaatcctagctccaactctctttgcaag 946
|||||||| || || ||||||| ||| |||||
Sbjct: 32 aacaaaattcttgcaccaactcgcttggcaag 1
>gb|BQ697144.1|BQ697144 NXPV_050_A11_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_050_A11 5' similar to Arabidopsis
thaliana sequence At3g46440 dTDP-glucose
4-6-dehydratases-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 484
Score = 135 bits (68), Expect = 6e-030
Identities = 318/404 (78%)
Strand = Plus / Minus
Query: 762 ccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataa 821
|||||||| ||||||||||| ||||| | || ||||| |||||||| | ||||||||
Sbjct: 407 ccatgctgtctgtgatagtcaaacattaatgtttctgccacacgctttncttcatcatag 348
Query: 822 cagctcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctca 881
|| || || |||||||| ||||||||||| ||||| || |||| |||| |||||||||
Sbjct: 347 caacttcttactccaatagggttaacattaccccaatattcctccttttgtggatgctca 288
Query: 882 agcggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctcttt 941
|| | | || |||||||||||||| ||||||||||| || || ||||||| |||
Sbjct: 287 aganggtnnnnatnnacttcagatgttgaggtcaacaaaattcttgcaccaactcgcttg 228
Query: 942 gcaaggcccagcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattg 1001
||||| |||| ||| |||| || ||||| || || ||||| || ||||| ||||||||
Sbjct: 227 gcaagtcccaacatattcaatgtgccaatcacgttagtctttattgtcttcacaggatta 168
Query: 1002 tgcttgtagaagattggtgaagcagggcaagcaaggtgatagatttggtcaacctccaca 1061
| || ||||| || ||||| || |||||||| | |||||||| || || || || ||
Sbjct: 167 tatttatagaatataggtgatgctgggcaagccaaatgatagatctgatccacttctacc 108
Query: 1062 agaagcggctcggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttc 1121
| || | ||| || |||||||| || ||||| ||||| |||| || || ||||| |||
Sbjct: 107 aacagggtctcagtcacatcatgccgaatgagttcaaaatttggatgcccaatccatttc 48
Query: 1122 ttcaggttatcttttgaaccagtgaaaaagttatcagcaacaat 1165
| |||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 47 ctgaggttatcttttgatccagtgaagaagttgtcagcaacaat 4
>gb|BF777618.1|BF777618 NXSI_070_F01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_070_F01 5' similar to Arabidopsis thaliana
sequence At2g28760 putative nucleotide-sugar dehydratase
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 442
Score = 129 bits (65), Expect = 3e-028
Identities = 270/340 (79%)
Strand = Plus / Minus
Query: 832 ctccaattgggttaacattgccccagtaggcctcggtttgaggatgctcaagcggatcac 891
||||||| ||||||||||| ||||| || | |||| ||||||||||| || ||||
Sbjct: 424 ctccaatagggttaacattaccccaatattcnnnnntttgtggatgctcaagagggtcac 365
Query: 892 cataaacttcagatgttgatgtcaacaaaatcctagctccaactctctttgcaaggccca 951
|||| |||||||||||||| ||||||||||| || || ||||||| ||| ||||| ||||
Sbjct: 364 catagacttcagatgttgaggtcaacaaaattcttgcaccaactcgcttggcaagtccca 305
Query: 952 gcatgttcagggtaccaataacatttgtcttgatggtcttaacaggattgtgcttgtaga 1011
||| |||| || ||||| || || ||||| || ||||| |||||||| | || ||||
Sbjct: 304 acatattcaatgtgccaatcacgttagtctttattgtcttcacaggattatatttataga 245
Query: 1012 agattggtgaagcagggcaagcaaggtgatagatttggtcaacctccacaagaagcggct 1071
| || ||||| || |||||||| | |||||||| || || || || || | || | ||
Sbjct: 244 atataggtgatgctgggcaagccaaatgatagatctgatccacttctaccaacagggtct 185
Query: 1072 cggtgacatcatgacggatgagctcaaatcttgggtgtccgatccacttcttcaggttat 1131
| || |||||||| || ||||| ||||| |||| || || ||||| ||| | |||||||
Sbjct: 184 cagtcacatcatgccgaatgagttcaaaatttggatgcccaatccatttcctgaggttat 125
Query: 1132 cttttgaaccagtgaaaaagttatcagcaacaatgacctc 1171
||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 124 cttttgatccagtgaagaagttgtcagcaacaatcacctc 85
>gb|BG832809.1|BG832809 NXPV_081_A01_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_081_A01 5' similar to Arabidopsis
thaliana sequence At2g28760 putative nucleotide-sugar
dehydratase see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 321
Score = 129 bits (65), Expect = 3e-028
Identities = 155/185 (83%)
Strand = Plus / Minus
Query: 762 ccatgctgcctgtgatagtcgaacatcagcgtctctgctacacgcttaccctcatcataa 821
|||||||| ||||||||||| ||||| | || ||||| |||||||| || ||||||||
Sbjct: 185 ccatgctgtctgtgatagtcaaacattaatgtttctgccacacgctttccttcatcatag 126
Query: 822 cagctcctgactccaattgggttaacattgccccagtaggcctcggtttgaggatgctca 881
|| || || |||||||| ||||||||||| ||||| || |||| |||| |||||||||
Sbjct: 125 caacttcttactccaatagggttaacattaccccaatattcctccttttgtggatgctca 66
Query: 882 agcggatcaccataaacttcagatgttgatgtcaacaaaatcctagctccaactctcttt 941
|| || |||||||| |||||||||||||| ||||||||||| || || ||||||| |||
Sbjct: 65 agagggtcaccatagacttcagatgttgaggtcaacaaaattcttgcaccaactcgcttg 6
Query: 942 gcaag 946
|||||
Sbjct: 5 gcaag 1
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 155,306
Number of Sequences: 355925
Number of extensions: 155306
Number of successful extensions: 43963
Number of sequences better than 0.5: 153
Number of HSP's better than 0.5 without gapping: 145
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 43603
Number of HSP's gapped (non-prelim): 304
length of query: 1454
length of database: 217,277,237
effective HSP length: 19
effective length of query: 1435
effective length of database: 210,514,662
effective search space: 302088539970
effective search space used: 302088539970
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)