BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.78
(943 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AA556976.1|AA556976 818 Loblolly pine N Pinus taeda cDNA... 46 0.003
gb|AA557076.1|AA557076 918 Loblolly pine N Pinus taeda cDNA... 46 0.003
gb|AI920211.1|AI920211 1741 Pine Lambda Zap Xylem library P... 46 0.003
gb|BE451806.1|BE451806 NXCI_002_E01_F NXCI (Nsf Xylem Compr... 46 0.003
gb|BF010526.1|BF010526 NXCI_085_D03_F NXCI (Nsf Xylem Compr... 46 0.003
gb|BF010652.1|BF010652 NXCI_087_F04_F NXCI (Nsf Xylem Compr... 46 0.003
gb|BF049710.1|BF049710 NXCI_106_B02_F NXCI (Nsf Xylem Compr... 46 0.003
gb|BF221098.1|BF221098 NXCI_163_D06_F NXCI (Nsf Xylem Compr... 46 0.003
gb|BF517486.1|BF517486 NXSI_022_F01_F NXSI (Nsf Xylem Side ... 46 0.003
gb|BF517890.1|BF517890 NXSI_029_D03_F NXSI (Nsf Xylem Side ... 46 0.003
gb|BF518354.1|BF518354 NXSI_038_D08_F NXSI (Nsf Xylem Side ... 46 0.003
gb|BG039781.1|BG039781 NXSI_103_H10_F NXSI (Nsf Xylem Side ... 46 0.003
gb|BG040515.1|BG040515 NXSI_112_B02_F NXSI (Nsf Xylem Side ... 46 0.003
gb|BG040771.1|BG040771 NXSI_114_H02_F NXSI (Nsf Xylem Side ... 46 0.003
gb|BG275251.1|BG275251 NXSI_138_E08_F NXSI (Nsf Xylem Side ... 46 0.003
gb|BQ701949.1|BQ701949 NXSI_122_E07_F NXSI (Nsf Xylem Side ... 46 0.003
gb|BQ702233.1|BQ702233 NXSI_126_D08_F NXSI (Nsf Xylem Side ... 46 0.003
gb|BQ702347.1|BQ702347 NXSI_127_F06_F NXSI (Nsf Xylem Side ... 46 0.003
gb|CD025569.1|CD025569 NXSI_064_A10_F NXSI (Nsf Xylem Side ... 46 0.003
gb|CF400396.1|CF400396 RTWW1_5_D06.b1_A015 Well-watered lob... 46 0.003
gb|CF400491.1|CF400491 RTWW1_5_D06.g1_A015 Well-watered lob... 46 0.003
gb|CF402757.1|CF402757 RTWW1_22_B05.g1_A015 Well-watered lo... 46 0.003
gb|CF475506.1|CF475506 RTWW2_12_E05.g1_A021 Well-watered lo... 46 0.003
gb|CF669166.1|CF669166 RTCNT1_41_D01.b1_A029 Root control P... 46 0.003
gb|CN783871.1|CN783871 EST782562 Sequencing ESTs from loblo... 46 0.003
gb|CN783961.1|CN783961 EST782652 Sequencing ESTs from loblo... 46 0.003
gb|CN784626.1|CN784626 EST783317 Sequencing ESTs from loblo... 46 0.003
gb|CN785153.1|CN785153 EST783844 Sequencing ESTs from loblo... 46 0.003
gb|CN785816.1|CN785816 EST784507 Sequencing ESTs from loblo... 46 0.003
gb|CO157814.1|CO157814 FLD1_2_G04.b1_A029 Root flooded Pinu... 46 0.003
gb|CO157883.1|CO157883 FLD1_2_G04.g1_A029 Root flooded Pinu... 46 0.003
gb|CO158637.1|CO158637 FLD1_8_E07.b1_A029 Root flooded Pinu... 46 0.003
gb|CO158707.1|CO158707 FLD1_8_E07.g1_A029 Root flooded Pinu... 46 0.003
gb|CO159966.1|CO159966 FLD1_17_G04.b1_A029 Root flooded Pin... 46 0.003
gb|CO161341.1|CO161341 FLD1_28_E04.b1_A029 Root flooded Pin... 46 0.003
gb|CO161602.1|CO161602 FLD1_30_A10.b1_A029 Root flooded Pin... 46 0.003
gb|CO162074.1|CO162074 FLD1_33_C05.b1_A029 Root flooded Pin... 46 0.003
gb|CO163221.1|CO163221 FLD1_40_F03.b1_A029 Root flooded Pin... 46 0.003
gb|CO163305.1|CO163305 FLD1_40_F03.g1_A029 Root flooded Pin... 46 0.003
gb|CO163529.1|CO163529 FLD1_42_E08.b1_A029 Root flooded Pin... 46 0.003
gb|CO163612.1|CO163612 FLD1_42_E08.g1_A029 Root flooded Pin... 46 0.003
gb|CO163724.1|CO163724 FLD1_43_H07.b1_A029 Root flooded Pin... 46 0.003
gb|CO164307.1|CO164307 FLD1_47_D11.b1_A029 Root flooded Pin... 46 0.003
gb|CO164379.1|CO164379 FLD1_47_D11.g1_A029 Root flooded Pin... 46 0.003
gb|CO165679.1|CO165679 FLD1_56_F06.b1_A029 Root flooded Pin... 46 0.003
gb|CO165748.1|CO165748 FLD1_56_F06.g1_A029 Root flooded Pin... 46 0.003
gb|CO410191.1|CO410191 EST840576 Sequencing ESTs from loblo... 46 0.003
gb|CO411964.1|CO411964 EST842349 Sequencing ESTs from loblo... 46 0.003
gb|CO413076.1|CO413076 EST843461 Sequencing ESTs from loblo... 46 0.003
gb|CO413545.1|CO413545 EST843930 Sequencing ESTs from loblo... 46 0.003
gb|CO362878.1|CO362878 RTK1_6_G05.b1_A029 Roots minus potas... 46 0.003
gb|CO362963.1|CO362963 RTK1_6_G05.g1_A029 Roots minus potas... 46 0.003
gb|CO364377.1|CO364377 RTK1_15_H04.b1_A029 Roots minus pota... 46 0.003
gb|CO370268.1|CO370268 RTK1_66_F02.g1_A029 Roots minus pota... 46 0.003
gb|CV034323.1|CV034323 RTNACL1_40_D07.b1_A029 Roots plus ad... 46 0.003
gb|CV034392.1|CV034392 RTNACL1_40_D07.g1_A029 Roots plus ad... 46 0.003
gb|CV134425.1|CV134425 EST845634 Sequencing ESTs from loblo... 46 0.003
gb|CV136377.1|CV136377 EST847586 Sequencing ESTs from loblo... 46 0.003
gb|CV136381.1|CV136381 EST847590 Sequencing ESTs from loblo... 46 0.003
gb|CV137146.1|CV137146 EST848355 Sequencing ESTs from loblo... 46 0.003
gb|CV137768.1|CV137768 EST848977 Sequencing ESTs from loblo... 46 0.003
gb|CV137969.1|CV137969 EST849178 Sequencing ESTs from loblo... 46 0.003
gb|CV138287.1|CV138287 EST849496 Sequencing ESTs from loblo... 46 0.003
gb|CV138491.1|CV138491 EST849700 Sequencing ESTs from loblo... 46 0.003
gb|CV139156.1|CV139156 EST850365 Sequencing ESTs from loblo... 46 0.003
gb|CV143548.1|CV143548 EST854757 Sequencing ESTs from loblo... 46 0.003
gb|CV144016.1|CV144016 EST855225 Sequencing ESTs from loblo... 46 0.003
gb|CV146154.1|CV146154 EST857363 Sequencing ESTs from loblo... 46 0.003
gb|CV146605.1|CV146605 EST857814 Sequencing ESTs from loblo... 46 0.003
gb|CV146798.1|CV146798 EST858007 Sequencing ESTs from loblo... 46 0.003
gb|CV147398.1|CV147398 EST858607 Sequencing ESTs from loblo... 46 0.003
gb|CV147747.1|CV147747 EST858956 Sequencing ESTs from loblo... 46 0.003
gb|CV147784.1|CV147784 EST858993 Sequencing ESTs from loblo... 46 0.003
gb|CV148583.1|CV148583 EST859792 Sequencing ESTs from loblo... 46 0.003
gb|CX647811.1|CX647811 COLD1_20_G12.b1_A029 Root cold Pinus... 46 0.003
gb|CX647855.1|CX647855 COLD1_20_G12.g1_A029 Root cold Pinus... 46 0.003
gb|CX714880.1|CX714880 RTPQ1_27_G10.g1_A032 Roots treated w... 46 0.003
gb|DN445547.1|DN445547 EST941346 Sequencing ESTs from loblo... 46 0.003
gb|DN446749.1|DN446749 EST942548 Sequencing ESTs from loblo... 46 0.003
gb|DN447358.1|DN447358 EST943157 Sequencing ESTs from loblo... 46 0.003
gb|DN447740.1|DN447740 EST943539 Sequencing ESTs from loblo... 46 0.003
gb|DN447985.1|DN447985 EST943784 Sequencing ESTs from loblo... 46 0.003
gb|DN448186.1|DN448186 EST943985 Sequencing ESTs from loblo... 46 0.003
gb|DN449228.1|DN449228 EST945027 Sequencing ESTs from loblo... 46 0.003
gb|DN449444.1|DN449444 EST945243 Sequencing ESTs from loblo... 46 0.003
gb|DN450507.1|DN450507 EST946306 Sequencing ESTs from loblo... 46 0.003
gb|DN450681.1|DN450681 EST946480 Sequencing ESTs from loblo... 46 0.003
gb|DN451592.1|DN451592 EST947391 Sequencing ESTs from loblo... 46 0.003
gb|DN452512.1|DN452512 EST948311 Sequencing ESTs from loblo... 46 0.003
gb|DN454185.1|DN454185 EST949984 Sequencing ESTs from loblo... 46 0.003
gb|DN454663.1|DN454663 EST950462 Sequencing ESTs from loblo... 46 0.003
gb|DN454874.1|DN454874 EST950673 Sequencing ESTs from loblo... 46 0.003
gb|DN454882.1|DN454882 EST950681 Sequencing ESTs from loblo... 46 0.003
gb|DN455315.1|DN455315 EST951114 Sequencing ESTs from loblo... 46 0.003
gb|DN456672.1|DN456672 EST952471 Sequencing ESTs from loblo... 46 0.003
gb|DN456971.1|DN456971 EST952770 Sequencing ESTs from loblo... 46 0.003
gb|DN458059.1|DN458059 EST953858 Sequencing ESTs from loblo... 46 0.003
gb|DN458174.1|DN458174 EST953973 Sequencing ESTs from loblo... 46 0.003
gb|DN459049.1|DN459049 EST954848 Sequencing ESTs from loblo... 46 0.003
gb|DN460714.1|DN460714 EST956513 Sequencing ESTs from loblo... 46 0.003
gb|DN464100.1|DN464100 EST959899 Sequencing ESTs from loblo... 46 0.003
gb|DN464945.1|DN464945 EST960744 Sequencing ESTs from loblo... 46 0.003
gb|DN465112.1|DN465112 EST960911 Sequencing ESTs from loblo... 46 0.003
gb|DR011385.1|DR011385 HEAT1_5_H10.b1_A029 Root at 37 C for... 46 0.003
gb|DR011468.1|DR011468 HEAT1_5_H10.g1_A029 Root at 37 C for... 46 0.003
gb|DR011475.1|DR011475 HEAT1_6_A06.b1_A029 Root at 37 C for... 46 0.003
gb|DR011552.1|DR011552 HEAT1_6_A06.g1_A029 Root at 37 C for... 46 0.003
gb|DR012707.1|DR012707 HEAT1_14_B11.g1_A029 Root at 37 C fo... 46 0.003
gb|DR012713.1|DR012713 HEAT1_14_C05.g1_A029 Root at 37 C fo... 46 0.003
gb|DR012797.1|DR012797 HEAT1_15_C09.b1_A029 Root at 37 C fo... 46 0.003
gb|DR014079.1|DR014079 HEAT1_23_F08.b1_A029 Root at 37 C fo... 46 0.003
gb|DR014160.1|DR014160 HEAT1_23_F08.g1_A029 Root at 37 C fo... 46 0.003
gb|DR017117.1|DR017117 STRS1_14_E01.b1_A034 Shoot tip pitch... 46 0.003
gb|DR017270.1|DR017270 STRS1_15_E04.b1_A034 Shoot tip pitch... 46 0.003
gb|DR017344.1|DR017344 STRS1_15_E04.g1_A034 Shoot tip pitch... 46 0.003
gb|DR017448.1|DR017448 STRS1_16_H02.b1_A034 Shoot tip pitch... 46 0.003
gb|DR017489.1|DR017489 STRS1_16_D04.g1_A034 Shoot tip pitch... 46 0.003
gb|DR022016.1|DR022016 STRS1_48_G07.b1_A034 Shoot tip pitch... 46 0.003
gb|DR022096.1|DR022096 STRS1_48_G07.g1_A034 Shoot tip pitch... 46 0.003
gb|DR049499.1|DR049499 RTBOR1_17_C03.b1_A029 Roots plus add... 46 0.003
gb|DR049567.1|DR049567 RTBOR1_17_C03.g1_A029 Roots plus add... 46 0.003
gb|DR049965.1|DR049965 RTBOR1_20_G08.b1_A029 Roots plus add... 46 0.003
gb|DR050534.1|DR050534 RTBOR1_24_D07.b1_A029 Roots plus add... 46 0.003
gb|DR050615.1|DR050615 RTBOR1_24_D07.g1_A029 Roots plus add... 46 0.003
gb|DR051447.1|DR051447 RTBOR1_30_D09.b1_A029 Roots plus add... 46 0.003
gb|DR053358.1|DR053358 RTCA1_10_D04.g1_A029 Roots minus cal... 46 0.003
gb|DR053566.1|DR053566 RTCA1_12_A09.b1_A029 Roots minus cal... 46 0.003
gb|DR053643.1|DR053643 RTCA1_12_A09.g1_A029 Roots minus cal... 46 0.003
gb|DR055335.1|DR055335 RTCA1_23_B12.b1_A029 Roots minus cal... 46 0.003
gb|DR055704.1|DR055704 RTCA1_25_H05.b1_A029 Roots minus cal... 46 0.003
gb|DR055784.1|DR055784 RTCA1_25_H05.g1_A029 Roots minus cal... 46 0.003
gb|DR058422.1|DR058422 RTNIT1_11_E07.g1_A029 Roots minus ni... 46 0.003
gb|DR059512.1|DR059512 RTNIT1_18_D06.b1_A029 Roots minus ni... 46 0.003
gb|DR059597.1|DR059597 RTNIT1_18_D06.g1_A029 Roots minus ni... 46 0.003
gb|DR070267.1|DR070267 RTDK1_12_F12.b1_A029 Roots, dark Pin... 46 0.003
gb|DR070354.1|DR070354 RTDK1_12_F12.g1_A029 Roots, dark Pin... 46 0.003
gb|DR080079.1|DR080079 RTFEPL1_20_C07.b1_A029 Roots plus ad... 46 0.003
gb|DR088435.1|DR088435 RTAL1_1_E10.g1_A029 Roots plus added... 46 0.003
gb|DR101445.1|DR101445 STRR1_73_E02.b1_A033 Stem Response R... 46 0.003
gb|DR118856.1|DR118856 RTMG1_19_D04.g1_A029 Roots minus mag... 46 0.003
gb|DR160847.1|DR160847 RTFE1_8_H09.b1_A029 Roots minus iron... 46 0.003
gb|DR160941.1|DR160941 RTFE1_8_H09.g1_A029 Roots minus iron... 46 0.003
gb|DR161409.1|DR161409 RTFE1_11_D06.g1_A029 Roots minus iro... 46 0.003
gb|DR163927.1|DR163927 RTFE1_45_F10.g1_A029 Roots minus iro... 46 0.003
gb|DR164029.1|DR164029 RTFE1_46_H11.b1_A029 Roots minus iro... 46 0.003
gb|DR164119.1|DR164119 RTFE1_46_H11.g1_A029 Roots minus iro... 46 0.003
gb|DR164143.1|DR164143 RTFE1_47_C07.b1_A029 Roots minus iro... 46 0.003
gb|DR164218.1|DR164218 RTFE1_47_C07.g1_A029 Roots minus iro... 46 0.003
gb|DR384267.1|DR384267 RTHG1_1_D08.b1_A029 Roots plus added... 46 0.003
gb|DR384347.1|DR384347 RTHG1_1_D08.g1_A029 Roots plus added... 46 0.003
gb|DR388551.1|DR388551 RTHG1_29_A06.b1_A029 Roots plus adde... 46 0.003
gb|DR388624.1|DR388624 RTHG1_29_A06.g1_A029 Roots plus adde... 46 0.003
gb|DR690761.1|DR690761 EST1080847 Normalized pine embryo li... 46 0.003
gb|DR742014.1|DR742014 RTCU1_1_D12.b1_A029 Roots plus added... 46 0.003
gb|DR742091.1|DR742091 RTCU1_1_D12.g1_A029 Roots plus added... 46 0.003
gb|DR744092.1|DR744092 RTCU1_20_E01.b1_A029 Roots plus adde... 46 0.003
gb|DR744562.1|DR744562 RTCU1_23_G04.b1_A029 Roots plus adde... 46 0.003
gb|DR744632.1|DR744632 RTCU1_23_G04.g1_A029 Roots plus adde... 46 0.003
gb|DR746197.1|DR746197 RTCU1_35_H01.b1_A029 Roots plus adde... 46 0.003
gb|DR746273.1|DR746273 RTCU1_35_H01.g1_A029 Roots plus adde... 46 0.003
gb|DT624968.1|DT624968 EST1159243 Sequencing ESTs from lobl... 46 0.003
gb|DT625140.1|DT625140 EST1159415 Sequencing ESTs from lobl... 46 0.003
gb|DT625229.1|DT625229 EST1159504 Sequencing ESTs from lobl... 46 0.003
gb|DT625288.1|DT625288 EST1159563 Sequencing ESTs from lobl... 46 0.003
gb|AW290315.1|AW290315 NXNV018G05F Nsf Xylem Normal wood Ve... 42 0.041
gb|AW290830.1|AW290830 NXNV047E02F Nsf Xylem Normal wood Ve... 42 0.041
gb|BX251030.1|BX251030 BX251030 Pinus pinaster differenciat... 42 0.041
gb|BX252406.1|BX252406 BX252406 Pinus pinaster differenciat... 42 0.041
gb|BX255151.1|BX255151 BX255151 Pinus pinaster differenciat... 42 0.041
gb|BE451763.1|BE451763 NXCI_001_H11_F NXCI (Nsf Xylem Compr... 42 0.041
gb|BE496339.1|BE496339 NXCI_019_A10_F NXCI (Nsf Xylem Compr... 42 0.041
gb|BE643776.1|BE643776 NXCI_047_B01_F NXCI (Nsf Xylem Compr... 42 0.041
gb|BE996992.1|BE996992 NXCI_093_H08_F NXCI (Nsf Xylem Compr... 42 0.041
gb|BF186285.1|BF186285 NXCI_135_E10_F NXCI (Nsf Xylem Compr... 42 0.041
gb|BF221054.1|BF221054 NXCI_162_G03_F NXCI (Nsf Xylem Compr... 42 0.041
gb|BF516749.1|BF516749 NXSI_002_H04_F NXSI (Nsf Xylem Side ... 42 0.041
gb|BF517372.1|BF517372 NXSI_013_G02_F NXSI (Nsf Xylem Side ... 42 0.041
gb|BF517384.1|BF517384 NXSI_013_H07_F NXSI (Nsf Xylem Side ... 42 0.041
gb|BF517676.1|BF517676 NXSI_028_H01_F NXSI (Nsf Xylem Side ... 42 0.041
gb|BF517702.1|BF517702 NXSI_027_B09_F NXSI (Nsf Xylem Side ... 42 0.041
gb|BF517797.1|BF517797 NXSI_031_D01_F NXSI (Nsf Xylem Side ... 42 0.041
gb|BF517799.1|BF517799 NXSI_031_D04_F NXSI (Nsf Xylem Side ... 42 0.041
gb|BF609257.1|BF609257 NXSI_042_C04_F NXSI (Nsf Xylem Side ... 42 0.041
gb|BF609397.1|BF609397 NXSI_045_G11_F NXSI (Nsf Xylem Side ... 42 0.041
gb|BF609902.1|BF609902 NXSI_052_D04_F NXSI (Nsf Xylem Side ... 42 0.041
gb|BF777378.1|BF777378 NXSI_068_H07_F NXSI (Nsf Xylem Side ... 42 0.041
gb|BF777492.1|BF777492 NXSI_069_C01_F NXSI (Nsf Xylem Side ... 42 0.041
gb|BF777797.1|BF777797 NXSI_075_G09_F NXSI (Nsf Xylem Side ... 42 0.041
gb|BF778598.1|BF778598 NXSI_088_E07_F NXSI (Nsf Xylem Side ... 42 0.041
gb|BF778703.1|BF778703 NXSI_086_A07_F NXSI (Nsf Xylem Side ... 42 0.041
gb|BF778840.1|BF778840 NXSI_089_A08_F NXSI (Nsf Xylem Side ... 42 0.041
gb|BG039261.1|BG039261 NXSI_097_A01_F NXSI (Nsf Xylem Side ... 42 0.041
gb|BG039888.1|BG039888 NXSI_105_C06_F NXSI (Nsf Xylem Side ... 42 0.041
gb|BG040257.1|BG040257 NXSI_110_C10_F NXSI (Nsf Xylem Side ... 42 0.041
gb|BG040511.1|BG040511 NXSI_112_A05_F NXSI (Nsf Xylem Side ... 42 0.041
gb|BQ655168.1|BQ655168 NXRV091_A07_F NXRV (Nsf Xylem Root w... 42 0.041
gb|BQ701356.1|BQ701356 NXSI_063_C03_F NXSI (Nsf Xylem Side ... 42 0.041
gb|BQ701941.1|BQ701941 NXSI_122_D10_F NXSI (Nsf Xylem Side ... 42 0.041
gb|BQ702082.1|BQ702082 NXSI_124_D05_F NXSI (Nsf Xylem Side ... 42 0.041
gb|BQ703095.1|BQ703095 NXSI_136_D07_F NXSI (Nsf Xylem Side ... 42 0.041
gb|CD017473.1|CD017473 NXCI_118_G05_F NXCI (Nsf Xylem Compr... 42 0.041
gb|CD025593.1|CD025593 NXSI_065_A04_F NXSI (Nsf Xylem Side ... 42 0.041
gb|CD027011.1|CD027011 NXNV018G05 Nsf Xylem Normal wood Ver... 42 0.041
gb|CD027494.1|CD027494 NXNV047E02 Nsf Xylem Normal wood Ver... 42 0.041
gb|CF387845.1|CF387845 RTDR1_18_H09.g1_A015 Loblolly pine r... 42 0.041
gb|CO159738.1|CO159738 FLD1_15_B11.g1_A029 Root flooded Pin... 42 0.041
gb|CO161420.1|CO161420 FLD1_28_E04.g1_A029 Root flooded Pin... 42 0.041
gb|CV138580.1|CV138580 EST849789 Sequencing ESTs from loblo... 42 0.041
gb|DR048680.1|DR048680 RTBOR1_10_B04.g1_A029 Roots plus add... 42 0.041
gb|DR050907.1|DR050907 RTBOR1_26_A04.g1_A029 Roots plus add... 42 0.041
gb|DR054023.1|DR054023 RTCA1_14_F07.g1_A029 Roots minus cal... 42 0.041
gb|DR079816.1|DR079816 RTFEPL1_18_A02.b1_A029 Roots plus ad... 42 0.041
gb|DR181460.1|DR181460 RTMNUT1_39_C05.b2_A029 Roots minus m... 42 0.041
gb|DR384635.1|DR384635 RTHG1_3_C02.g1_A029 Roots plus added... 42 0.041
gb|AL750562.1|AL750562 AL750562 RN Pinus pinaster cDNA clon... 40 0.16
gb|AL751181.1|AL751181 AL751181 RS Pinus pinaster cDNA clon... 40 0.16
gb|AL751199.1|AL751199 AL751199 RS Pinus pinaster cDNA clon... 40 0.16
gb|BF517662.1|BF517662 NXSI_028_F09_F NXSI (Nsf Xylem Side ... 40 0.16
gb|BM157698.1|BM157698 NXLV_022_G10_F NXLV (Nsf Xylem Late ... 40 0.16
gb|CF669383.1|CF669383 RTCNT1_43_B07.b1_A029 Root control P... 40 0.16
gb|CN784137.1|CN784137 EST782828 Sequencing ESTs from loblo... 40 0.16
gb|CN784401.1|CN784401 EST783092 Sequencing ESTs from loblo... 40 0.16
gb|CN784957.1|CN784957 EST783648 Sequencing ESTs from loblo... 40 0.16
gb|CN785322.1|CN785322 EST784013 Sequencing ESTs from loblo... 40 0.16
gb|CN785524.1|CN785524 EST784215 Sequencing ESTs from loblo... 40 0.16
gb|CN785882.1|CN785882 EST784573 Sequencing ESTs from loblo... 40 0.16
gb|CN785884.1|CN785884 EST784575 Sequencing ESTs from loblo... 40 0.16
gb|CO159671.1|CO159671 FLD1_15_B11.b1_A029 Root flooded Pin... 40 0.16
gb|CO409136.1|CO409136 EST839521 Sequencing ESTs from loblo... 40 0.16
gb|CO410721.1|CO410721 EST841106 Sequencing ESTs from loblo... 40 0.16
gb|CO410753.1|CO410753 EST841138 Sequencing ESTs from loblo... 40 0.16
gb|CO410970.1|CO410970 EST841355 Sequencing ESTs from loblo... 40 0.16
gb|CO411476.1|CO411476 EST841861 Sequencing ESTs from loblo... 40 0.16
gb|CO412274.1|CO412274 EST842659 Sequencing ESTs from loblo... 40 0.16
gb|CO413914.1|CO413914 EST844299 Sequencing ESTs from loblo... 40 0.16
gb|CO414063.1|CO414063 EST844448 Sequencing ESTs from loblo... 40 0.16
gb|CO414130.1|CO414130 EST844515 Sequencing ESTs from loblo... 40 0.16
gb|CO414477.1|CO414477 EST844862 Sequencing ESTs from loblo... 40 0.16
gb|CO414547.1|CO414547 EST844932 Sequencing ESTs from loblo... 40 0.16
gb|CV134731.1|CV134731 EST845940 Sequencing ESTs from loblo... 40 0.16
gb|CV134942.1|CV134942 EST846151 Sequencing ESTs from loblo... 40 0.16
gb|CV135302.1|CV135302 EST846511 Sequencing ESTs from loblo... 40 0.16
gb|CV135469.1|CV135469 EST846678 Sequencing ESTs from loblo... 40 0.16
gb|CV136398.1|CV136398 EST847607 Sequencing ESTs from loblo... 40 0.16
gb|CV136843.1|CV136843 EST848052 Sequencing ESTs from loblo... 40 0.16
gb|CV136960.1|CV136960 EST848169 Sequencing ESTs from loblo... 40 0.16
gb|CV137463.1|CV137463 EST848672 Sequencing ESTs from loblo... 40 0.16
gb|CV137498.1|CV137498 EST848707 Sequencing ESTs from loblo... 40 0.16
gb|CV137552.1|CV137552 EST848761 Sequencing ESTs from loblo... 40 0.16
gb|CV137695.1|CV137695 EST848904 Sequencing ESTs from loblo... 40 0.16
gb|CV137994.1|CV137994 EST849203 Sequencing ESTs from loblo... 40 0.16
gb|CV138076.1|CV138076 EST849285 Sequencing ESTs from loblo... 40 0.16
gb|CV138144.1|CV138144 EST849353 Sequencing ESTs from loblo... 40 0.16
gb|CV138442.1|CV138442 EST849651 Sequencing ESTs from loblo... 40 0.16
gb|CV138566.1|CV138566 EST849775 Sequencing ESTs from loblo... 40 0.16
gb|CV138811.1|CV138811 EST850020 Sequencing ESTs from loblo... 40 0.16
gb|CV138894.1|CV138894 EST850103 Sequencing ESTs from loblo... 40 0.16
gb|CV138937.1|CV138937 EST850146 Sequencing ESTs from loblo... 40 0.16
gb|CV139177.1|CV139177 EST850386 Sequencing ESTs from loblo... 40 0.16
gb|CV143723.1|CV143723 EST854932 Sequencing ESTs from loblo... 40 0.16
gb|CV144291.1|CV144291 EST855500 Sequencing ESTs from loblo... 40 0.16
gb|CV144317.1|CV144317 EST855526 Sequencing ESTs from loblo... 40 0.16
gb|CV144321.1|CV144321 EST855530 Sequencing ESTs from loblo... 40 0.16
gb|CV144828.1|CV144828 EST856037 Sequencing ESTs from loblo... 40 0.16
gb|CV145379.1|CV145379 EST856588 Sequencing ESTs from loblo... 40 0.16
gb|CV145402.1|CV145402 EST856611 Sequencing ESTs from loblo... 40 0.16
gb|CV145781.1|CV145781 EST856990 Sequencing ESTs from loblo... 40 0.16
gb|CV145990.1|CV145990 EST857199 Sequencing ESTs from loblo... 40 0.16
gb|CV146264.1|CV146264 EST857473 Sequencing ESTs from loblo... 40 0.16
gb|CV146411.1|CV146411 EST857620 Sequencing ESTs from loblo... 40 0.16
gb|CV146489.1|CV146489 EST857698 Sequencing ESTs from loblo... 40 0.16
gb|CV147117.1|CV147117 EST858326 Sequencing ESTs from loblo... 40 0.16
gb|CV147371.1|CV147371 EST858580 Sequencing ESTs from loblo... 40 0.16
gb|CV147451.1|CV147451 EST858660 Sequencing ESTs from loblo... 40 0.16
gb|CV147596.1|CV147596 EST858805 Sequencing ESTs from loblo... 40 0.16
gb|CV147635.1|CV147635 EST858844 Sequencing ESTs from loblo... 40 0.16
gb|CV147680.1|CV147680 EST858889 Sequencing ESTs from loblo... 40 0.16
gb|CV147874.1|CV147874 EST859083 Sequencing ESTs from loblo... 40 0.16
gb|CV147891.1|CV147891 EST859100 Sequencing ESTs from loblo... 40 0.16
gb|CV147895.1|CV147895 EST859104 Sequencing ESTs from loblo... 40 0.16
gb|CV147914.1|CV147914 EST859123 Sequencing ESTs from loblo... 40 0.16
gb|CV148213.1|CV148213 EST859422 Sequencing ESTs from loblo... 40 0.16
gb|DN446783.1|DN446783 EST942582 Sequencing ESTs from loblo... 40 0.16
gb|DN446838.1|DN446838 EST942637 Sequencing ESTs from loblo... 40 0.16
gb|DN446864.1|DN446864 EST942663 Sequencing ESTs from loblo... 40 0.16
gb|DN447975.1|DN447975 EST943774 Sequencing ESTs from loblo... 40 0.16
gb|DN449110.1|DN449110 EST944909 Sequencing ESTs from loblo... 40 0.16
gb|DN449833.1|DN449833 EST945632 Sequencing ESTs from loblo... 40 0.16
gb|DN449933.1|DN449933 EST945732 Sequencing ESTs from loblo... 40 0.16
gb|DN450016.1|DN450016 EST945815 Sequencing ESTs from loblo... 40 0.16
gb|DN450902.1|DN450902 EST946701 Sequencing ESTs from loblo... 40 0.16
gb|DN450951.1|DN450951 EST946750 Sequencing ESTs from loblo... 40 0.16
gb|DN450988.1|DN450988 EST946787 Sequencing ESTs from loblo... 40 0.16
gb|DN451228.1|DN451228 EST947027 Sequencing ESTs from loblo... 40 0.16
gb|DN451931.1|DN451931 EST947730 Sequencing ESTs from loblo... 40 0.16
gb|DN452027.1|DN452027 EST947826 Sequencing ESTs from loblo... 40 0.16
gb|DN454086.1|DN454086 EST949885 Sequencing ESTs from loblo... 40 0.16
gb|DN455934.1|DN455934 EST951733 Sequencing ESTs from loblo... 40 0.16
gb|DN456855.1|DN456855 EST952654 Sequencing ESTs from loblo... 40 0.16
gb|DN456870.1|DN456870 EST952669 Sequencing ESTs from loblo... 40 0.16
gb|DN457325.1|DN457325 EST953124 Sequencing ESTs from loblo... 40 0.16
gb|DN457676.1|DN457676 EST953475 Sequencing ESTs from loblo... 40 0.16
gb|DN457823.1|DN457823 EST953622 Sequencing ESTs from loblo... 40 0.16
gb|DN458297.1|DN458297 EST954096 Sequencing ESTs from loblo... 40 0.16
gb|DN458512.1|DN458512 EST954311 Sequencing ESTs from loblo... 40 0.16
gb|DN458641.1|DN458641 EST954440 Sequencing ESTs from loblo... 40 0.16
gb|DN458787.1|DN458787 EST954586 Sequencing ESTs from loblo... 40 0.16
gb|DN458843.1|DN458843 EST954642 Sequencing ESTs from loblo... 40 0.16
gb|DN458998.1|DN458998 EST954797 Sequencing ESTs from loblo... 40 0.16
gb|DN459974.1|DN459974 EST955773 Sequencing ESTs from loblo... 40 0.16
gb|DN460631.1|DN460631 EST956430 Sequencing ESTs from loblo... 40 0.16
gb|DN460711.1|DN460711 EST956510 Sequencing ESTs from loblo... 40 0.16
gb|DN461110.1|DN461110 EST956909 Sequencing ESTs from loblo... 40 0.16
gb|DN461408.1|DN461408 EST957207 Sequencing ESTs from loblo... 40 0.16
gb|DN462014.1|DN462014 EST957813 Sequencing ESTs from loblo... 40 0.16
gb|DN462372.1|DN462372 EST958171 Sequencing ESTs from loblo... 40 0.16
gb|DN462661.1|DN462661 EST958460 Sequencing ESTs from loblo... 40 0.16
gb|DN462759.1|DN462759 EST958558 Sequencing ESTs from loblo... 40 0.16
gb|DN463423.1|DN463423 EST959222 Sequencing ESTs from loblo... 40 0.16
gb|DN463566.1|DN463566 EST959365 Sequencing ESTs from loblo... 40 0.16
gb|DN463660.1|DN463660 EST959459 Sequencing ESTs from loblo... 40 0.16
gb|DN463831.1|DN463831 EST959630 Sequencing ESTs from loblo... 40 0.16
gb|DN464232.1|DN464232 EST960031 Sequencing ESTs from loblo... 40 0.16
gb|DN464348.1|DN464348 EST960147 Sequencing ESTs from loblo... 40 0.16
gb|DN464780.1|DN464780 EST960579 Sequencing ESTs from loblo... 40 0.16
gb|DN464934.1|DN464934 EST960733 Sequencing ESTs from loblo... 40 0.16
gb|DN464989.1|DN464989 EST960788 Sequencing ESTs from loblo... 40 0.16
gb|DN465159.1|DN465159 EST960958 Sequencing ESTs from loblo... 40 0.16
gb|DR050832.1|DR050832 RTBOR1_26_A04.b1_A029 Roots plus add... 40 0.16
gb|DR168466.1|DR168466 RTPHOS1_25_D09.g1_A029 Roots minus p... 40 0.16
gb|DR384562.1|DR384562 RTHG1_3_C02.b1_A029 Roots plus added... 40 0.16
gb|DR387041.1|DR387041 RTHG1_19_B09.b1_A029 Roots plus adde... 40 0.16
gb|DR387109.1|DR387109 RTHG1_19_B09.g1_A029 Roots plus adde... 40 0.16
gb|DT625389.1|DT625389 EST1159664 Sequencing ESTs from lobl... 40 0.16
gb|DT627132.1|DT627132 EST1160208 Sequencing ESTs from lobl... 40 0.16
>gb|AA556976.1|AA556976 818 Loblolly pine N Pinus taeda cDNA clone 5N11G, mRNA sequence
Length = 545
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 360 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 314
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 183 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 143
>gb|AA557076.1|AA557076 918 Loblolly pine N Pinus taeda cDNA clone 6N3G, mRNA sequence
Length = 617
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 367 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 321
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 190 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 150
>gb|AI920211.1|AI920211 1741 Pine Lambda Zap Xylem library Pinus taeda cDNA clone
d11_PL21NCSU, mRNA sequence
Length = 588
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 360 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 314
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 183 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 143
>gb|BE451806.1|BE451806 NXCI_002_E01_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_002_E01 5' similar to Arabidopsis
thaliana sequence At2g21660 glycine-rich RNA binding
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 352
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 109 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 63
>gb|BF010526.1|BF010526 NXCI_085_D03_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_085_D03 5' similar to Arabidopsis
thaliana sequence At2g21660 glycine-rich RNA binding
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 352
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 197 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 151
>gb|BF010652.1|BF010652 NXCI_087_F04_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_087_F04 5' similar to Arabidopsis
thaliana sequence At2g21660 glycine-rich RNA binding
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 382
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 366 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 320
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 189 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 149
>gb|BF049710.1|BF049710 NXCI_106_B02_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_106_B02 5' similar to Arabidopsis
thaliana sequence At2g21660 glycine-rich RNA binding
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 243
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 213 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 167
>gb|BF221098.1|BF221098 NXCI_163_D06_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_163_D06 5' similar to Arabidopsis
thaliana sequence At2g21660 glycine-rich RNA binding
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 343
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 295 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 249
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 118 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 78
>gb|BF517486.1|BF517486 NXSI_022_F01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_022_F01 5' similar to Arabidopsis thaliana
sequence At2g21660 glycine-rich RNA binding protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 511
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 342 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 296
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 165 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 125
>gb|BF517890.1|BF517890 NXSI_029_D03_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_029_D03 5' similar to Arabidopsis thaliana
sequence At2g21660 glycine-rich RNA binding protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 497
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 362 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 316
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 185 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 145
>gb|BF518354.1|BF518354 NXSI_038_D08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_038_D08 5' similar to Arabidopsis thaliana
sequence At4g39260 glycine-rich protein (clone AtGRP8)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 242
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 79 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 33
>gb|BG039781.1|BG039781 NXSI_103_H10_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_103_H10 5' similar to Arabidopsis thaliana
sequence At2g21660 glycine-rich RNA binding protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 381
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 350 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 304
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 173 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 133
>gb|BG040515.1|BG040515 NXSI_112_B02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_112_B02 5' similar to Arabidopsis thaliana
sequence At2g21660 glycine-rich RNA binding protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 537
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 363 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 317
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 186 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 146
>gb|BG040771.1|BG040771 NXSI_114_H02_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_114_H02 5' similar to Arabidopsis thaliana
sequence At2g21660 glycine-rich RNA binding protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 532
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 358 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 312
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 181 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 141
>gb|BG275251.1|BG275251 NXSI_138_E08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_138_E08 5' similar to Arabidopsis thaliana
sequence At2g21660 glycine-rich RNA binding protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 455
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 358 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 312
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 181 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 141
>gb|BQ701949.1|BQ701949 NXSI_122_E07_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_122_E07 5' similar to Arabidopsis thaliana
sequence At2g21660 glycine-rich RNA binding protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 387
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 359 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 313
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 182 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 142
>gb|BQ702233.1|BQ702233 NXSI_126_D08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_126_D08 5' similar to Arabidopsis thaliana
sequence At2g21660 glycine-rich RNA binding protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 503
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 363 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 317
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 186 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 146
>gb|BQ702347.1|BQ702347 NXSI_127_F06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_127_F06 5' similar to Arabidopsis thaliana
sequence At2g21660 glycine-rich RNA binding protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 518
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 350 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 304
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 173 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 133
>gb|CD025569.1|CD025569 NXSI_064_A10_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_064_A10 5' similar to Arabidopsis thaliana
sequence At4g39260 glycine-rich protein (clone AtGRP8)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 127
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 79 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 33
>gb|CF400396.1|CF400396 RTWW1_5_D06.b1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_5_D06_A015 3', mRNA sequence
Length = 582
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 61 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 15
>gb|CF400491.1|CF400491 RTWW1_5_D06.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_5_D06_A015 5', mRNA sequence
Length = 731
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 359 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 313
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 182 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 142
>gb|CF402757.1|CF402757 RTWW1_22_B05.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_22_B05_A015 5', mRNA sequence
Length = 689
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 336 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 290
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 159 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 119
>gb|CF475506.1|CF475506 RTWW2_12_E05.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_12_E05_A021 5', mRNA sequence
Length = 712
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 340 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 294
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 163 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 123
>gb|CF669166.1|CF669166 RTCNT1_41_D01.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_41_D01_A029 3', mRNA sequence
Length = 705
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 84 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 38
>gb|CN783871.1|CN783871 EST782562 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAE29 5' end, mRNA sequence
Length = 778
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 363 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 317
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 186 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 146
>gb|CN783961.1|CN783961 EST782652 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAF49 5' end, mRNA sequence
Length = 808
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 342 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 296
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 165 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 125
>gb|CN784626.1|CN784626 EST783317 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAO40 5' end, mRNA sequence
Length = 828
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 372 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 326
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 195 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 155
>gb|CN785153.1|CN785153 EST783844 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAV27 5' end, mRNA sequence
Length = 874
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 371 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 325
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 194 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 154
>gb|CN785816.1|CN785816 EST784507 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAB386 5' end, mRNA sequence
Length = 823
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 285 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 239
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 108 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 68
>gb|CO157814.1|CO157814 FLD1_2_G04.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_2_G04_A029 3', mRNA sequence
Length = 411
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 21 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 67
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 198 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 238
>gb|CO157883.1|CO157883 FLD1_2_G04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_2_G04_A029 5', mRNA sequence
Length = 735
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 504 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 550
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 681 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 721
>gb|CO158637.1|CO158637 FLD1_8_E07.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_8_E07_A029 3', mRNA sequence
Length = 373
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 27 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 73
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 204 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 244
>gb|CO158707.1|CO158707 FLD1_8_E07.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_8_E07_A029 5', mRNA sequence
Length = 568
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 512 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 558
>gb|CO159966.1|CO159966 FLD1_17_G04.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_17_G04_A029 3', mRNA sequence
Length = 770
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 232 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 186
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 55 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 15
>gb|CO161341.1|CO161341 FLD1_28_E04.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_28_E04_A029 3', mRNA sequence
Length = 794
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 256 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 210
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 79 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 39
>gb|CO161602.1|CO161602 FLD1_30_A10.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_30_A10_A029 3', mRNA sequence
Length = 744
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 206 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 160
>gb|CO162074.1|CO162074 FLD1_33_C05.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_33_C05_A029 3', mRNA sequence
Length = 776
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 240 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 194
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 63 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 23
>gb|CO163221.1|CO163221 FLD1_40_F03.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_40_F03_A029 3', mRNA sequence
Length = 804
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 260 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 214
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 83 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 43
>gb|CO163305.1|CO163305 FLD1_40_F03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_40_F03_A029 5', mRNA sequence
Length = 715
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 337 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 291
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 160 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 120
>gb|CO163529.1|CO163529 FLD1_42_E08.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_42_E08_A029 3', mRNA sequence
Length = 527
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 192 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 238
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 369 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 409
>gb|CO163612.1|CO163612 FLD1_42_E08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_42_E08_A029 5', mRNA sequence
Length = 870
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 507 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 553
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 684 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 724
>gb|CO163724.1|CO163724 FLD1_43_H07.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_43_H07_A029 3', mRNA sequence
Length = 818
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 277 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 231
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 100 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 60
>gb|CO164307.1|CO164307 FLD1_47_D11.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_47_D11_A029 3', mRNA sequence
Length = 796
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 490 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 536
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 667 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 707
>gb|CO164379.1|CO164379 FLD1_47_D11.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_47_D11_A029 5', mRNA sequence
Length = 819
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 507 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 553
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 684 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 724
>gb|CO165679.1|CO165679 FLD1_56_F06.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_56_F06_A029 3', mRNA sequence
Length = 812
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 438 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 484
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 615 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 655
>gb|CO165748.1|CO165748 FLD1_56_F06.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_56_F06_A029 5', mRNA sequence
Length = 783
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 543 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 589
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 720 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 760
>gb|CO410191.1|CO410191 EST840576 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAKZ86 5' end, mRNA sequence
Length = 850
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 341 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 295
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 164 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 124
>gb|CO411964.1|CO411964 EST842349 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIALR15 5' end, mRNA sequence
Length = 825
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 369 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 323
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 192 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 152
>gb|CO413076.1|CO413076 EST843461 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAM581 5' end, mRNA sequence
Length = 632
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 369 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 323
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 192 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 152
>gb|CO413545.1|CO413545 EST843930 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAMC29 5' end, mRNA sequence
Length = 881
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 602 gtgatgttgcggccgtccagctccttgccgttcatgccctcgatggc 648
|||||||| | |||||| ||| |||||||||||||| | ||||||||
Sbjct: 360 gtgatgttcctgccgtcgagcaccttgccgttcatggcatcgatggc 314
Score = 42.1 bits (21), Expect = 0.041
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 779 tcgtccgtggcccaggcgaggccgccgacgaagcagcggta 819
||||| |||||||| ||||| || ||||||||||| |||||
Sbjct: 183 tcgtcggtggcccaagcgagacccccgacgaagcaacggta 143
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 72,196
Number of Sequences: 355925
Number of extensions: 72196
Number of successful extensions: 21452
Number of sequences better than 0.5: 336
Number of HSP's better than 0.5 without gapping: 336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 20437
Number of HSP's gapped (non-prelim): 1014
length of query: 943
length of database: 217,277,237
effective HSP length: 19
effective length of query: 924
effective length of database: 210,514,662
effective search space: 194515547688
effective search space used: 194515547688
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)