BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.623
(863 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AA556976.1|AA556976 818 Loblolly pine N Pinus taeda cDNA... 60 2e-007
gb|AI920211.1|AI920211 1741 Pine Lambda Zap Xylem library P... 60 2e-007
gb|BE451806.1|BE451806 NXCI_002_E01_F NXCI (Nsf Xylem Compr... 60 2e-007
gb|BF010526.1|BF010526 NXCI_085_D03_F NXCI (Nsf Xylem Compr... 60 2e-007
gb|BF049710.1|BF049710 NXCI_106_B02_F NXCI (Nsf Xylem Compr... 60 2e-007
gb|BF517486.1|BF517486 NXSI_022_F01_F NXSI (Nsf Xylem Side ... 60 2e-007
gb|BF517890.1|BF517890 NXSI_029_D03_F NXSI (Nsf Xylem Side ... 60 2e-007
gb|BF518354.1|BF518354 NXSI_038_D08_F NXSI (Nsf Xylem Side ... 60 2e-007
gb|BQ702347.1|BQ702347 NXSI_127_F06_F NXSI (Nsf Xylem Side ... 60 2e-007
gb|CD025569.1|CD025569 NXSI_064_A10_F NXSI (Nsf Xylem Side ... 60 2e-007
gb|CF400396.1|CF400396 RTWW1_5_D06.b1_A015 Well-watered lob... 60 2e-007
gb|CF400491.1|CF400491 RTWW1_5_D06.g1_A015 Well-watered lob... 60 2e-007
gb|CF402757.1|CF402757 RTWW1_22_B05.g1_A015 Well-watered lo... 60 2e-007
gb|CF475506.1|CF475506 RTWW2_12_E05.g1_A021 Well-watered lo... 60 2e-007
gb|CF669166.1|CF669166 RTCNT1_41_D01.b1_A029 Root control P... 60 2e-007
gb|CN783871.1|CN783871 EST782562 Sequencing ESTs from loblo... 60 2e-007
gb|CN783961.1|CN783961 EST782652 Sequencing ESTs from loblo... 60 2e-007
gb|CN784626.1|CN784626 EST783317 Sequencing ESTs from loblo... 60 2e-007
gb|CN785153.1|CN785153 EST783844 Sequencing ESTs from loblo... 60 2e-007
gb|CN785816.1|CN785816 EST784507 Sequencing ESTs from loblo... 60 2e-007
gb|CO157814.1|CO157814 FLD1_2_G04.b1_A029 Root flooded Pinu... 60 2e-007
gb|CO157883.1|CO157883 FLD1_2_G04.g1_A029 Root flooded Pinu... 60 2e-007
gb|CO158637.1|CO158637 FLD1_8_E07.b1_A029 Root flooded Pinu... 60 2e-007
gb|CO158707.1|CO158707 FLD1_8_E07.g1_A029 Root flooded Pinu... 60 2e-007
gb|CO159966.1|CO159966 FLD1_17_G04.b1_A029 Root flooded Pin... 60 2e-007
gb|CO161341.1|CO161341 FLD1_28_E04.b1_A029 Root flooded Pin... 60 2e-007
gb|CO161602.1|CO161602 FLD1_30_A10.b1_A029 Root flooded Pin... 60 2e-007
gb|CO162074.1|CO162074 FLD1_33_C05.b1_A029 Root flooded Pin... 60 2e-007
gb|CO163221.1|CO163221 FLD1_40_F03.b1_A029 Root flooded Pin... 60 2e-007
gb|CO163305.1|CO163305 FLD1_40_F03.g1_A029 Root flooded Pin... 60 2e-007
gb|CO163529.1|CO163529 FLD1_42_E08.b1_A029 Root flooded Pin... 60 2e-007
gb|CO163612.1|CO163612 FLD1_42_E08.g1_A029 Root flooded Pin... 60 2e-007
gb|CO163724.1|CO163724 FLD1_43_H07.b1_A029 Root flooded Pin... 60 2e-007
gb|CO164307.1|CO164307 FLD1_47_D11.b1_A029 Root flooded Pin... 60 2e-007
gb|CO164379.1|CO164379 FLD1_47_D11.g1_A029 Root flooded Pin... 60 2e-007
gb|CO165679.1|CO165679 FLD1_56_F06.b1_A029 Root flooded Pin... 60 2e-007
gb|CO165748.1|CO165748 FLD1_56_F06.g1_A029 Root flooded Pin... 60 2e-007
gb|CO410191.1|CO410191 EST840576 Sequencing ESTs from loblo... 60 2e-007
gb|CO411964.1|CO411964 EST842349 Sequencing ESTs from loblo... 60 2e-007
gb|CO413076.1|CO413076 EST843461 Sequencing ESTs from loblo... 60 2e-007
gb|CO413545.1|CO413545 EST843930 Sequencing ESTs from loblo... 60 2e-007
gb|CO362878.1|CO362878 RTK1_6_G05.b1_A029 Roots minus potas... 60 2e-007
gb|CO362963.1|CO362963 RTK1_6_G05.g1_A029 Roots minus potas... 60 2e-007
gb|CO364377.1|CO364377 RTK1_15_H04.b1_A029 Roots minus pota... 60 2e-007
gb|CO370268.1|CO370268 RTK1_66_F02.g1_A029 Roots minus pota... 60 2e-007
gb|CV034323.1|CV034323 RTNACL1_40_D07.b1_A029 Roots plus ad... 60 2e-007
gb|CV034392.1|CV034392 RTNACL1_40_D07.g1_A029 Roots plus ad... 60 2e-007
gb|CV134425.1|CV134425 EST845634 Sequencing ESTs from loblo... 60 2e-007
gb|CV136377.1|CV136377 EST847586 Sequencing ESTs from loblo... 60 2e-007
gb|CV136381.1|CV136381 EST847590 Sequencing ESTs from loblo... 60 2e-007
gb|CV137146.1|CV137146 EST848355 Sequencing ESTs from loblo... 60 2e-007
gb|CV137768.1|CV137768 EST848977 Sequencing ESTs from loblo... 60 2e-007
gb|CV137969.1|CV137969 EST849178 Sequencing ESTs from loblo... 60 2e-007
gb|CV138287.1|CV138287 EST849496 Sequencing ESTs from loblo... 60 2e-007
gb|CV138491.1|CV138491 EST849700 Sequencing ESTs from loblo... 60 2e-007
gb|CV139156.1|CV139156 EST850365 Sequencing ESTs from loblo... 60 2e-007
gb|CV143548.1|CV143548 EST854757 Sequencing ESTs from loblo... 60 2e-007
gb|CV144016.1|CV144016 EST855225 Sequencing ESTs from loblo... 60 2e-007
gb|CV146154.1|CV146154 EST857363 Sequencing ESTs from loblo... 60 2e-007
gb|CV146605.1|CV146605 EST857814 Sequencing ESTs from loblo... 60 2e-007
gb|CV146798.1|CV146798 EST858007 Sequencing ESTs from loblo... 60 2e-007
gb|CV147398.1|CV147398 EST858607 Sequencing ESTs from loblo... 60 2e-007
gb|CV147747.1|CV147747 EST858956 Sequencing ESTs from loblo... 60 2e-007
gb|CV147784.1|CV147784 EST858993 Sequencing ESTs from loblo... 60 2e-007
gb|CV148583.1|CV148583 EST859792 Sequencing ESTs from loblo... 60 2e-007
gb|CX647811.1|CX647811 COLD1_20_G12.b1_A029 Root cold Pinus... 60 2e-007
gb|DN445547.1|DN445547 EST941346 Sequencing ESTs from loblo... 60 2e-007
gb|DN446749.1|DN446749 EST942548 Sequencing ESTs from loblo... 60 2e-007
gb|DN447358.1|DN447358 EST943157 Sequencing ESTs from loblo... 60 2e-007
gb|DN447740.1|DN447740 EST943539 Sequencing ESTs from loblo... 60 2e-007
gb|DN447985.1|DN447985 EST943784 Sequencing ESTs from loblo... 60 2e-007
gb|DN448186.1|DN448186 EST943985 Sequencing ESTs from loblo... 60 2e-007
gb|DN449228.1|DN449228 EST945027 Sequencing ESTs from loblo... 60 2e-007
gb|DN449444.1|DN449444 EST945243 Sequencing ESTs from loblo... 60 2e-007
gb|DN450507.1|DN450507 EST946306 Sequencing ESTs from loblo... 60 2e-007
gb|DN450681.1|DN450681 EST946480 Sequencing ESTs from loblo... 60 2e-007
gb|DN451592.1|DN451592 EST947391 Sequencing ESTs from loblo... 60 2e-007
gb|DN452512.1|DN452512 EST948311 Sequencing ESTs from loblo... 60 2e-007
gb|DN454185.1|DN454185 EST949984 Sequencing ESTs from loblo... 60 2e-007
gb|DN454663.1|DN454663 EST950462 Sequencing ESTs from loblo... 60 2e-007
gb|DN454874.1|DN454874 EST950673 Sequencing ESTs from loblo... 60 2e-007
gb|DN454882.1|DN454882 EST950681 Sequencing ESTs from loblo... 60 2e-007
gb|DN455315.1|DN455315 EST951114 Sequencing ESTs from loblo... 60 2e-007
gb|DN456672.1|DN456672 EST952471 Sequencing ESTs from loblo... 60 2e-007
gb|DN456971.1|DN456971 EST952770 Sequencing ESTs from loblo... 60 2e-007
gb|DN458059.1|DN458059 EST953858 Sequencing ESTs from loblo... 60 2e-007
gb|DN458174.1|DN458174 EST953973 Sequencing ESTs from loblo... 60 2e-007
gb|DN459049.1|DN459049 EST954848 Sequencing ESTs from loblo... 60 2e-007
gb|DN460714.1|DN460714 EST956513 Sequencing ESTs from loblo... 60 2e-007
gb|DN464100.1|DN464100 EST959899 Sequencing ESTs from loblo... 60 2e-007
gb|DN464945.1|DN464945 EST960744 Sequencing ESTs from loblo... 60 2e-007
gb|DN465112.1|DN465112 EST960911 Sequencing ESTs from loblo... 60 2e-007
gb|DR011385.1|DR011385 HEAT1_5_H10.b1_A029 Root at 37 C for... 60 2e-007
gb|DR011468.1|DR011468 HEAT1_5_H10.g1_A029 Root at 37 C for... 60 2e-007
gb|DR011475.1|DR011475 HEAT1_6_A06.b1_A029 Root at 37 C for... 60 2e-007
gb|DR011552.1|DR011552 HEAT1_6_A06.g1_A029 Root at 37 C for... 60 2e-007
gb|DR012707.1|DR012707 HEAT1_14_B11.g1_A029 Root at 37 C fo... 60 2e-007
gb|DR012713.1|DR012713 HEAT1_14_C05.g1_A029 Root at 37 C fo... 60 2e-007
gb|DR012797.1|DR012797 HEAT1_15_C09.b1_A029 Root at 37 C fo... 60 2e-007
gb|DR014079.1|DR014079 HEAT1_23_F08.b1_A029 Root at 37 C fo... 60 2e-007
gb|DR014160.1|DR014160 HEAT1_23_F08.g1_A029 Root at 37 C fo... 60 2e-007
gb|DR017117.1|DR017117 STRS1_14_E01.b1_A034 Shoot tip pitch... 60 2e-007
gb|DR017270.1|DR017270 STRS1_15_E04.b1_A034 Shoot tip pitch... 60 2e-007
gb|DR017344.1|DR017344 STRS1_15_E04.g1_A034 Shoot tip pitch... 60 2e-007
gb|DR017448.1|DR017448 STRS1_16_H02.b1_A034 Shoot tip pitch... 60 2e-007
gb|DR017489.1|DR017489 STRS1_16_D04.g1_A034 Shoot tip pitch... 60 2e-007
gb|DR022016.1|DR022016 STRS1_48_G07.b1_A034 Shoot tip pitch... 60 2e-007
gb|DR022096.1|DR022096 STRS1_48_G07.g1_A034 Shoot tip pitch... 60 2e-007
gb|DR049499.1|DR049499 RTBOR1_17_C03.b1_A029 Roots plus add... 60 2e-007
gb|DR049567.1|DR049567 RTBOR1_17_C03.g1_A029 Roots plus add... 60 2e-007
gb|DR049965.1|DR049965 RTBOR1_20_G08.b1_A029 Roots plus add... 60 2e-007
gb|DR050534.1|DR050534 RTBOR1_24_D07.b1_A029 Roots plus add... 60 2e-007
gb|DR050615.1|DR050615 RTBOR1_24_D07.g1_A029 Roots plus add... 60 2e-007
gb|DR051447.1|DR051447 RTBOR1_30_D09.b1_A029 Roots plus add... 60 2e-007
gb|DR053358.1|DR053358 RTCA1_10_D04.g1_A029 Roots minus cal... 60 2e-007
gb|DR053566.1|DR053566 RTCA1_12_A09.b1_A029 Roots minus cal... 60 2e-007
gb|DR053643.1|DR053643 RTCA1_12_A09.g1_A029 Roots minus cal... 60 2e-007
gb|DR055335.1|DR055335 RTCA1_23_B12.b1_A029 Roots minus cal... 60 2e-007
gb|DR055704.1|DR055704 RTCA1_25_H05.b1_A029 Roots minus cal... 60 2e-007
gb|DR055784.1|DR055784 RTCA1_25_H05.g1_A029 Roots minus cal... 60 2e-007
gb|DR058422.1|DR058422 RTNIT1_11_E07.g1_A029 Roots minus ni... 60 2e-007
gb|DR059512.1|DR059512 RTNIT1_18_D06.b1_A029 Roots minus ni... 60 2e-007
gb|DR059597.1|DR059597 RTNIT1_18_D06.g1_A029 Roots minus ni... 60 2e-007
gb|DR070267.1|DR070267 RTDK1_12_F12.b1_A029 Roots, dark Pin... 60 2e-007
gb|DR070354.1|DR070354 RTDK1_12_F12.g1_A029 Roots, dark Pin... 60 2e-007
gb|DR080079.1|DR080079 RTFEPL1_20_C07.b1_A029 Roots plus ad... 60 2e-007
gb|DR088435.1|DR088435 RTAL1_1_E10.g1_A029 Roots plus added... 60 2e-007
gb|DR101445.1|DR101445 STRR1_73_E02.b1_A033 Stem Response R... 60 2e-007
gb|DR118856.1|DR118856 RTMG1_19_D04.g1_A029 Roots minus mag... 60 2e-007
gb|DR160847.1|DR160847 RTFE1_8_H09.b1_A029 Roots minus iron... 60 2e-007
gb|DR160941.1|DR160941 RTFE1_8_H09.g1_A029 Roots minus iron... 60 2e-007
gb|DR161409.1|DR161409 RTFE1_11_D06.g1_A029 Roots minus iro... 60 2e-007
gb|DR163927.1|DR163927 RTFE1_45_F10.g1_A029 Roots minus iro... 60 2e-007
gb|DR164029.1|DR164029 RTFE1_46_H11.b1_A029 Roots minus iro... 60 2e-007
gb|DR164119.1|DR164119 RTFE1_46_H11.g1_A029 Roots minus iro... 60 2e-007
gb|DR164143.1|DR164143 RTFE1_47_C07.b1_A029 Roots minus iro... 60 2e-007
gb|DR164218.1|DR164218 RTFE1_47_C07.g1_A029 Roots minus iro... 60 2e-007
gb|DR384267.1|DR384267 RTHG1_1_D08.b1_A029 Roots plus added... 60 2e-007
gb|DR384347.1|DR384347 RTHG1_1_D08.g1_A029 Roots plus added... 60 2e-007
gb|DR388551.1|DR388551 RTHG1_29_A06.b1_A029 Roots plus adde... 60 2e-007
gb|DR388624.1|DR388624 RTHG1_29_A06.g1_A029 Roots plus adde... 60 2e-007
gb|DR690761.1|DR690761 EST1080847 Normalized pine embryo li... 60 2e-007
gb|DR742014.1|DR742014 RTCU1_1_D12.b1_A029 Roots plus added... 60 2e-007
gb|DR742091.1|DR742091 RTCU1_1_D12.g1_A029 Roots plus added... 60 2e-007
gb|DR744092.1|DR744092 RTCU1_20_E01.b1_A029 Roots plus adde... 60 2e-007
gb|DR744562.1|DR744562 RTCU1_23_G04.b1_A029 Roots plus adde... 60 2e-007
gb|DR744632.1|DR744632 RTCU1_23_G04.g1_A029 Roots plus adde... 60 2e-007
gb|DR746197.1|DR746197 RTCU1_35_H01.b1_A029 Roots plus adde... 60 2e-007
gb|DR746273.1|DR746273 RTCU1_35_H01.g1_A029 Roots plus adde... 60 2e-007
gb|DT624968.1|DT624968 EST1159243 Sequencing ESTs from lobl... 60 2e-007
gb|DT625140.1|DT625140 EST1159415 Sequencing ESTs from lobl... 60 2e-007
gb|DT625229.1|DT625229 EST1159504 Sequencing ESTs from lobl... 60 2e-007
gb|DT625288.1|DT625288 EST1159563 Sequencing ESTs from lobl... 60 2e-007
gb|AA557076.1|AA557076 918 Loblolly pine N Pinus taeda cDNA... 58 6e-007
gb|BF010652.1|BF010652 NXCI_087_F04_F NXCI (Nsf Xylem Compr... 58 6e-007
gb|BF221098.1|BF221098 NXCI_163_D06_F NXCI (Nsf Xylem Compr... 58 6e-007
gb|BG039781.1|BG039781 NXSI_103_H10_F NXSI (Nsf Xylem Side ... 58 6e-007
gb|BG040515.1|BG040515 NXSI_112_B02_F NXSI (Nsf Xylem Side ... 58 6e-007
gb|BG040771.1|BG040771 NXSI_114_H02_F NXSI (Nsf Xylem Side ... 58 6e-007
gb|BG275251.1|BG275251 NXSI_138_E08_F NXSI (Nsf Xylem Side ... 58 6e-007
gb|BQ702233.1|BQ702233 NXSI_126_D08_F NXSI (Nsf Xylem Side ... 58 6e-007
gb|CX714880.1|CX714880 RTPQ1_27_G10.g1_A032 Roots treated w... 58 6e-007
gb|DR079816.1|DR079816 RTFEPL1_18_A02.b1_A029 Roots plus ad... 56 2e-006
gb|BX252186.1|BX252186 BX252186 Pinus pinaster differenciat... 54 1e-005
gb|BX255423.1|BX255423 BX255423 Pinus pinaster differenciat... 54 1e-005
gb|BG040511.1|BG040511 NXSI_112_A05_F NXSI (Nsf Xylem Side ... 54 1e-005
gb|BM157698.1|BM157698 NXLV_022_G10_F NXLV (Nsf Xylem Late ... 54 1e-005
gb|BQ701941.1|BQ701941 NXSI_122_D10_F NXSI (Nsf Xylem Side ... 54 1e-005
gb|BQ701949.1|BQ701949 NXSI_122_E07_F NXSI (Nsf Xylem Side ... 54 1e-005
gb|CD017473.1|CD017473 NXCI_118_G05_F NXCI (Nsf Xylem Compr... 54 1e-005
gb|CF387845.1|CF387845 RTDR1_18_H09.g1_A015 Loblolly pine r... 54 1e-005
gb|CF669383.1|CF669383 RTCNT1_43_B07.b1_A029 Root control P... 54 1e-005
gb|BX682087.1|BX682087 BX682087 RS Pinus pinaster cDNA clon... 54 1e-005
gb|CO159671.1|CO159671 FLD1_15_B11.b1_A029 Root flooded Pin... 54 1e-005
gb|CX647855.1|CX647855 COLD1_20_G12.g1_A029 Root cold Pinus... 54 1e-005
gb|DR050832.1|DR050832 RTBOR1_26_A04.b1_A029 Roots plus add... 54 1e-005
gb|DR050907.1|DR050907 RTBOR1_26_A04.g1_A029 Roots plus add... 54 1e-005
gb|DR054023.1|DR054023 RTCA1_14_F07.g1_A029 Roots minus cal... 54 1e-005
gb|DR168466.1|DR168466 RTPHOS1_25_D09.g1_A029 Roots minus p... 54 1e-005
gb|DR384562.1|DR384562 RTHG1_3_C02.b1_A029 Roots plus added... 54 1e-005
gb|DR384635.1|DR384635 RTHG1_3_C02.g1_A029 Roots plus added... 54 1e-005
gb|DR387041.1|DR387041 RTHG1_19_B09.b1_A029 Roots plus adde... 54 1e-005
gb|DR387109.1|DR387109 RTHG1_19_B09.g1_A029 Roots plus adde... 54 1e-005
gb|AL750562.1|AL750562 AL750562 RN Pinus pinaster cDNA clon... 52 4e-005
gb|AL751181.1|AL751181 AL751181 RS Pinus pinaster cDNA clon... 52 4e-005
gb|AL751199.1|AL751199 AL751199 RS Pinus pinaster cDNA clon... 52 4e-005
gb|BX251030.1|BX251030 BX251030 Pinus pinaster differenciat... 52 4e-005
gb|BX252406.1|BX252406 BX252406 Pinus pinaster differenciat... 52 4e-005
gb|BX255151.1|BX255151 BX255151 Pinus pinaster differenciat... 52 4e-005
gb|BF517384.1|BF517384 NXSI_013_H07_F NXSI (Nsf Xylem Side ... 52 4e-005
gb|BF609902.1|BF609902 NXSI_052_D04_F NXSI (Nsf Xylem Side ... 52 4e-005
gb|BF777492.1|BF777492 NXSI_069_C01_F NXSI (Nsf Xylem Side ... 52 4e-005
gb|DR181460.1|DR181460 RTMNUT1_39_C05.b2_A029 Roots minus m... 52 4e-005
gb|DR746019.1|DR746019 RTCU1_34_D11.b1_A029 Roots plus adde... 52 4e-005
gb|AW290315.1|AW290315 NXNV018G05F Nsf Xylem Normal wood Ve... 50 2e-004
gb|BE451763.1|BE451763 NXCI_001_H11_F NXCI (Nsf Xylem Compr... 50 2e-004
gb|BE452102.1|BE452102 NXCI_009_G01_F NXCI (Nsf Xylem Compr... 50 2e-004
gb|BE496339.1|BE496339 NXCI_019_A10_F NXCI (Nsf Xylem Compr... 50 2e-004
gb|BE643776.1|BE643776 NXCI_047_B01_F NXCI (Nsf Xylem Compr... 50 2e-004
gb|BE996992.1|BE996992 NXCI_093_H08_F NXCI (Nsf Xylem Compr... 50 2e-004
gb|BF169690.1|BF169690 NXCI_126_E07_F NXCI (Nsf Xylem Compr... 50 2e-004
gb|BF186285.1|BF186285 NXCI_135_E10_F NXCI (Nsf Xylem Compr... 50 2e-004
gb|BF221054.1|BF221054 NXCI_162_G03_F NXCI (Nsf Xylem Compr... 50 2e-004
gb|BF516749.1|BF516749 NXSI_002_H04_F NXSI (Nsf Xylem Side ... 50 2e-004
gb|BF517372.1|BF517372 NXSI_013_G02_F NXSI (Nsf Xylem Side ... 50 2e-004
gb|BF517676.1|BF517676 NXSI_028_H01_F NXSI (Nsf Xylem Side ... 50 2e-004
gb|BF517702.1|BF517702 NXSI_027_B09_F NXSI (Nsf Xylem Side ... 50 2e-004
gb|BF517797.1|BF517797 NXSI_031_D01_F NXSI (Nsf Xylem Side ... 50 2e-004
gb|BF517799.1|BF517799 NXSI_031_D04_F NXSI (Nsf Xylem Side ... 50 2e-004
gb|BF609257.1|BF609257 NXSI_042_C04_F NXSI (Nsf Xylem Side ... 50 2e-004
gb|BF609397.1|BF609397 NXSI_045_G11_F NXSI (Nsf Xylem Side ... 50 2e-004
gb|BF777378.1|BF777378 NXSI_068_H07_F NXSI (Nsf Xylem Side ... 50 2e-004
gb|BF777797.1|BF777797 NXSI_075_G09_F NXSI (Nsf Xylem Side ... 50 2e-004
gb|BF778598.1|BF778598 NXSI_088_E07_F NXSI (Nsf Xylem Side ... 50 2e-004
gb|BF778703.1|BF778703 NXSI_086_A07_F NXSI (Nsf Xylem Side ... 50 2e-004
gb|BF778840.1|BF778840 NXSI_089_A08_F NXSI (Nsf Xylem Side ... 50 2e-004
gb|BG039261.1|BG039261 NXSI_097_A01_F NXSI (Nsf Xylem Side ... 50 2e-004
gb|BG039888.1|BG039888 NXSI_105_C06_F NXSI (Nsf Xylem Side ... 50 2e-004
gb|BG040257.1|BG040257 NXSI_110_C10_F NXSI (Nsf Xylem Side ... 50 2e-004
gb|BQ655168.1|BQ655168 NXRV091_A07_F NXRV (Nsf Xylem Root w... 50 2e-004
gb|BQ701356.1|BQ701356 NXSI_063_C03_F NXSI (Nsf Xylem Side ... 50 2e-004
gb|BQ702082.1|BQ702082 NXSI_124_D05_F NXSI (Nsf Xylem Side ... 50 2e-004
gb|BQ703095.1|BQ703095 NXSI_136_D07_F NXSI (Nsf Xylem Side ... 50 2e-004
gb|CD025234.1|CD025234 NXSI_031_B04_F NXSI (Nsf Xylem Side ... 50 2e-004
gb|CD025593.1|CD025593 NXSI_065_A04_F NXSI (Nsf Xylem Side ... 50 2e-004
gb|CD027011.1|CD027011 NXNV018G05 Nsf Xylem Normal wood Ver... 50 2e-004
gb|CO159738.1|CO159738 FLD1_15_B11.g1_A029 Root flooded Pin... 50 2e-004
gb|CO161420.1|CO161420 FLD1_28_E04.g1_A029 Root flooded Pin... 50 2e-004
gb|CV138580.1|CV138580 EST849789 Sequencing ESTs from loblo... 50 2e-004
gb|DR048680.1|DR048680 RTBOR1_10_B04.g1_A029 Roots plus add... 50 2e-004
gb|BF517662.1|BF517662 NXSI_028_F09_F NXSI (Nsf Xylem Side ... 48 6e-004
gb|AA556225.1|AA556225 80 Loblolly pine CA Pinus taeda cDNA... 46 0.002
gb|DR051890.1|DR051890 RTCA1_1_C10.b1_A029 Roots minus calc... 46 0.002
gb|DR021476.1|DR021476 STRS1_45_A01.b1_A034 Shoot tip pitch... 44 0.009
gb|AA739547.1|AA739547 312 PtIFG2 Pinus taeda cDNA clone 85... 42 0.037
gb|AL750939.1|AL750939 AL750939 RS Pinus pinaster cDNA clon... 42 0.037
gb|BX249585.1|BX249585 BX249585 Pinus pinaster differenciat... 42 0.037
gb|BX250290.1|BX250290 BX250290 Pinus pinaster differenciat... 42 0.037
gb|BX250291.1|BX250291 BX250291 Pinus pinaster differenciat... 42 0.037
gb|BX250629.1|BX250629 BX250629 Pinus pinaster differenciat... 42 0.037
gb|BX252723.1|BX252723 BX252723 Pinus pinaster differenciat... 42 0.037
gb|BX253245.1|BX253245 BX253245 Pinus pinaster differenciat... 42 0.037
gb|BX253351.1|BX253351 BX253351 Pinus pinaster differenciat... 42 0.037
gb|BX253482.1|BX253482 BX253482 Pinus pinaster differenciat... 42 0.037
gb|BX253577.1|BX253577 BX253577 Pinus pinaster differenciat... 42 0.037
gb|BX253894.1|BX253894 BX253894 Pinus pinaster differenciat... 42 0.037
gb|BX255116.1|BX255116 BX255116 Pinus pinaster differenciat... 42 0.037
gb|BF518035.1|BF518035 NXSI_030_C05_F NXSI (Nsf Xylem Side ... 42 0.037
gb|BF609578.1|BF609578 NXSI_046_F01_F NXSI (Nsf Xylem Side ... 42 0.037
gb|BQ702090.1|BQ702090 NXSI_124_F04_F NXSI (Nsf Xylem Side ... 42 0.037
gb|CF387938.1|CF387938 RTDR1_17_H07.b1_A015 Loblolly pine r... 42 0.037
gb|CF387943.1|CF387943 RTDR1_17_G12.b1_A015 Loblolly pine r... 42 0.037
gb|CF388027.1|CF388027 RTDR1_17_H07.g1_A015 Loblolly pine r... 42 0.037
gb|CF388030.1|CF388030 RTDR1_17_G12.g1_A015 Loblolly pine r... 42 0.037
gb|CF401081.1|CF401081 RTWW1_10_H11.b1_A015 Well-watered lo... 42 0.037
gb|CF401213.1|CF401213 RTWW1_10_H11.g1_A015 Well-watered lo... 42 0.037
gb|CF471419.1|CF471419 RTDS1_3_C03.b1_A015 Drought-stressed... 42 0.037
gb|CF471463.1|CF471463 RTDS1_3_C03.g1_A015 Drought-stressed... 42 0.037
gb|CF667586.1|CF667586 RTCNT1_31_G04.b1_A029 Root control P... 42 0.037
gb|CF667671.1|CF667671 RTCNT1_31_G04.g1_A029 Root control P... 42 0.037
gb|CF670336.1|CF670336 RTCNT1_49_C09.g1_A029 Root control P... 42 0.037
gb|CO163209.1|CO163209 FLD1_40_E01.b1_A029 Root flooded Pin... 42 0.037
gb|CO163292.1|CO163292 FLD1_40_E01.g1_A029 Root flooded Pin... 42 0.037
gb|CO410632.1|CO410632 EST841017 Sequencing ESTs from loblo... 42 0.037
gb|CO411374.1|CO411374 EST841759 Sequencing ESTs from loblo... 42 0.037
gb|CO366373.1|CO366373 RTK1_27_B04.g1_A029 Roots minus pota... 42 0.037
gb|CV138066.1|CV138066 EST849275 Sequencing ESTs from loblo... 42 0.037
gb|DN446560.1|DN446560 EST942359 Sequencing ESTs from loblo... 42 0.037
gb|DN446970.1|DN446970 EST942769 Sequencing ESTs from loblo... 42 0.037
gb|DN449948.1|DN449948 EST945747 Sequencing ESTs from loblo... 42 0.037
gb|DN461635.1|DN461635 EST957434 Sequencing ESTs from loblo... 42 0.037
gb|DN463989.1|DN463989 EST959788 Sequencing ESTs from loblo... 42 0.037
gb|DN464588.1|DN464588 EST960387 Sequencing ESTs from loblo... 42 0.037
gb|DR018284.1|DR018284 STRS1_21_F12.g1_A034 Shoot tip pitch... 42 0.037
gb|DR018655.1|DR018655 STRS1_24_F12.g1_A034 Shoot tip pitch... 42 0.037
gb|DR020854.1|DR020854 STRS1_39_E07.g1_A034 Shoot tip pitch... 42 0.037
gb|DR021639.1|DR021639 STRS1_46_B07.b1_A034 Shoot tip pitch... 42 0.037
gb|DR021803.1|DR021803 STRS1_47_B10.b1_A034 Shoot tip pitch... 42 0.037
gb|DR023659.1|DR023659 STRS1_59_E02.b1_A034 Shoot tip pitch... 42 0.037
gb|DR023734.1|DR023734 STRS1_59_E02.g1_A034 Shoot tip pitch... 42 0.037
gb|DR095295.1|DR095295 STRR1_20_D04.b1_A033 Stem Response R... 42 0.037
gb|DR095373.1|DR095373 STRR1_20_D04.g1_A033 Stem Response R... 42 0.037
gb|DR096885.1|DR096885 STRR1_31_B12.b1_A033 Stem Response R... 42 0.037
gb|DR096958.1|DR096958 STRR1_31_B12.g1_A033 Stem Response R... 42 0.037
gb|DR180649.1|DR180649 RTMNUT1_34_A09.b1_A029 Roots minus m... 42 0.037
gb|DR180726.1|DR180726 RTMNUT1_34_A09.g1_A029 Roots minus m... 42 0.037
gb|DR386323.1|DR386323 RTHG1_14_H03.b1_A029 Roots plus adde... 42 0.037
gb|DR744406.1|DR744406 RTCU1_22_F05.b1_A029 Roots plus adde... 42 0.037
gb|DR744480.1|DR744480 RTCU1_22_F05.g1_A029 Roots plus adde... 42 0.037
gb|DT624547.1|DT624547 EST1158726 Sequencing ESTs from lobl... 42 0.037
gb|BX249354.1|BX249354 BX249354 Pinus pinaster differenciat... 40 0.15
gb|BX254387.1|BX254387 BX254387 Pinus pinaster differenciat... 40 0.15
gb|BX682302.2|BX682302 BX682302 Pinus pinaster differenciat... 40 0.15
gb|CR354733.1|CR354733 CR354733 Pinus pinaster differenciat... 40 0.15
gb|CO160032.1|CO160032 FLD1_17_G04.g1_A029 Root flooded Pin... 40 0.15
gb|DN453518.1|DN453518 EST949317 Sequencing ESTs from loblo... 40 0.15
gb|DN454468.1|DN454468 EST950267 Sequencing ESTs from loblo... 40 0.15
gb|DR012881.1|DR012881 HEAT1_15_C09.g1_A029 Root at 37 C fo... 40 0.15
>gb|AA556976.1|AA556976 818 Loblolly pine N Pinus taeda cDNA clone 5N11G, mRNA sequence
Length = 545
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 314 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 373
Query: 403 cagtcc 408
||||||
Sbjct: 374 cagtcc 379
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 143 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 183
>gb|AI920211.1|AI920211 1741 Pine Lambda Zap Xylem library Pinus taeda cDNA clone
d11_PL21NCSU, mRNA sequence
Length = 588
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 314 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 373
Query: 403 cagtcc 408
||||||
Sbjct: 374 cagtcc 379
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 143 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 183
>gb|BE451806.1|BE451806 NXCI_002_E01_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_002_E01 5' similar to Arabidopsis
thaliana sequence At2g21660 glycine-rich RNA binding
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 352
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 63 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 122
Query: 403 cagtcc 408
||||||
Sbjct: 123 cagtcc 128
>gb|BF010526.1|BF010526 NXCI_085_D03_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_085_D03 5' similar to Arabidopsis
thaliana sequence At2g21660 glycine-rich RNA binding
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 352
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 151 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 210
Query: 403 cagtcc 408
||||||
Sbjct: 211 cagtcc 216
>gb|BF049710.1|BF049710 NXCI_106_B02_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_106_B02 5' similar to Arabidopsis
thaliana sequence At2g21660 glycine-rich RNA binding
protein see http://mips.gsf.de/proj/thal/db/index.html,
mRNA sequence
Length = 243
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 167 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 226
Query: 403 cagtcc 408
||||||
Sbjct: 227 cagtcc 232
Score = 40.1 bits (20), Expect = 0.15
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 177 ttgcttcgttggcggcctcgcctgggccaccgacga 212
||||||||| || || ||||| ||||||||||||||
Sbjct: 1 ttgcttcgtcgggggtctcgcttgggccaccgacga 36
>gb|BF517486.1|BF517486 NXSI_022_F01_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_022_F01 5' similar to Arabidopsis thaliana
sequence At2g21660 glycine-rich RNA binding protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 511
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 296 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 355
Query: 403 cagtcc 408
||||||
Sbjct: 356 cagtcc 361
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 125 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 165
>gb|BF517890.1|BF517890 NXSI_029_D03_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_029_D03 5' similar to Arabidopsis thaliana
sequence At2g21660 glycine-rich RNA binding protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 497
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 316 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 375
Query: 403 cagtcc 408
||||||
Sbjct: 376 cagtcc 381
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 145 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 185
>gb|BF518354.1|BF518354 NXSI_038_D08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_038_D08 5' similar to Arabidopsis thaliana
sequence At4g39260 glycine-rich protein (clone AtGRP8)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 242
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 33 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 92
Query: 403 cagtcc 408
||||||
Sbjct: 93 cagtcc 98
>gb|BQ702347.1|BQ702347 NXSI_127_F06_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_127_F06 5' similar to Arabidopsis thaliana
sequence At2g21660 glycine-rich RNA binding protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 518
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 304 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 363
Query: 403 cagtcc 408
||||||
Sbjct: 364 cagtcc 369
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 133 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 173
>gb|CD025569.1|CD025569 NXSI_064_A10_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_064_A10 5' similar to Arabidopsis thaliana
sequence At4g39260 glycine-rich protein (clone AtGRP8)
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 127
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 33 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 92
Query: 403 cagtcc 408
||||||
Sbjct: 93 cagtcc 98
>gb|CF400396.1|CF400396 RTWW1_5_D06.b1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_5_D06_A015 3', mRNA sequence
Length = 582
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 15 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 74
Query: 403 cagtcc 408
||||||
Sbjct: 75 cagtcc 80
>gb|CF400491.1|CF400491 RTWW1_5_D06.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_5_D06_A015 5', mRNA sequence
Length = 731
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 313 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 372
Query: 403 cagtcc 408
||||||
Sbjct: 373 cagtcc 378
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 142 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 182
>gb|CF402757.1|CF402757 RTWW1_22_B05.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_22_B05_A015 5', mRNA sequence
Length = 689
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 290 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 349
Query: 403 cagtcc 408
||||||
Sbjct: 350 cagtcc 355
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 119 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 159
>gb|CF475506.1|CF475506 RTWW2_12_E05.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_12_E05_A021 5', mRNA sequence
Length = 712
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 294 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 353
Query: 403 cagtcc 408
||||||
Sbjct: 354 cagtcc 359
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 123 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 163
>gb|CF669166.1|CF669166 RTCNT1_41_D01.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_41_D01_A029 3', mRNA sequence
Length = 705
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 38 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 97
Query: 403 cagtcc 408
||||||
Sbjct: 98 cagtcc 103
>gb|CN783871.1|CN783871 EST782562 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAE29 5' end, mRNA sequence
Length = 778
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 317 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 376
Query: 403 cagtcc 408
||||||
Sbjct: 377 cagtcc 382
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 146 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 186
>gb|CN783961.1|CN783961 EST782652 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAF49 5' end, mRNA sequence
Length = 808
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 296 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 355
Query: 403 cagtcc 408
||||||
Sbjct: 356 cagtcc 361
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 125 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 165
>gb|CN784626.1|CN784626 EST783317 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAO40 5' end, mRNA sequence
Length = 828
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 326 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 385
Query: 403 cagtcc 408
||||||
Sbjct: 386 cagtcc 391
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 155 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 195
>gb|CN785153.1|CN785153 EST783844 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAAV27 5' end, mRNA sequence
Length = 874
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 325 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 384
Query: 403 cagtcc 408
||||||
Sbjct: 385 cagtcc 390
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 154 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 194
>gb|CN785816.1|CN785816 EST784507 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAB386 5' end, mRNA sequence
Length = 823
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 239 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 298
Query: 403 cagtcc 408
||||||
Sbjct: 299 cagtcc 304
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 68 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 108
>gb|CO157814.1|CO157814 FLD1_2_G04.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_2_G04_A029 3', mRNA sequence
Length = 411
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 67 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 8
Query: 403 cagtcc 408
||||||
Sbjct: 7 cagtcc 2
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 238 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 198
>gb|CO157883.1|CO157883 FLD1_2_G04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_2_G04_A029 5', mRNA sequence
Length = 735
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 550 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 491
Query: 403 cagtcc 408
||||||
Sbjct: 490 cagtcc 485
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 721 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 681
>gb|CO158637.1|CO158637 FLD1_8_E07.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_8_E07_A029 3', mRNA sequence
Length = 373
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 73 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 14
Query: 403 cagtcc 408
||||||
Sbjct: 13 cagtcc 8
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 244 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 204
>gb|CO158707.1|CO158707 FLD1_8_E07.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_8_E07_A029 5', mRNA sequence
Length = 568
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 558 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 499
Query: 403 cagtcc 408
||||||
Sbjct: 498 cagtcc 493
>gb|CO159966.1|CO159966 FLD1_17_G04.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_17_G04_A029 3', mRNA sequence
Length = 770
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 186 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 245
Query: 403 cagtcc 408
||||||
Sbjct: 246 cagtcc 251
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 15 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 55
>gb|CO161341.1|CO161341 FLD1_28_E04.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_28_E04_A029 3', mRNA sequence
Length = 794
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 210 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 269
Query: 403 cagtcc 408
||||||
Sbjct: 270 cagtcc 275
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 39 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 79
>gb|CO161602.1|CO161602 FLD1_30_A10.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_30_A10_A029 3', mRNA sequence
Length = 744
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 160 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 219
Query: 403 cagtcc 408
||||||
Sbjct: 220 cagtcc 225
>gb|CO162074.1|CO162074 FLD1_33_C05.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_33_C05_A029 3', mRNA sequence
Length = 776
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 194 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 253
Query: 403 cagtcc 408
||||||
Sbjct: 254 cagtcc 259
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 23 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 63
>gb|CO163221.1|CO163221 FLD1_40_F03.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_40_F03_A029 3', mRNA sequence
Length = 804
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 214 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 273
Query: 403 cagtcc 408
||||||
Sbjct: 274 cagtcc 279
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 43 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 83
>gb|CO163305.1|CO163305 FLD1_40_F03.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_40_F03_A029 5', mRNA sequence
Length = 715
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 291 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 350
Query: 403 cagtcc 408
||||||
Sbjct: 351 cagtcc 356
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 120 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 160
>gb|CO163529.1|CO163529 FLD1_42_E08.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_42_E08_A029 3', mRNA sequence
Length = 527
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 238 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 179
Query: 403 cagtcc 408
||||||
Sbjct: 178 cagtcc 173
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 409 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 369
>gb|CO163612.1|CO163612 FLD1_42_E08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_42_E08_A029 5', mRNA sequence
Length = 870
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 553 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 494
Query: 403 cagtcc 408
||||||
Sbjct: 493 cagtcc 488
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 724 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 684
>gb|CO163724.1|CO163724 FLD1_43_H07.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_43_H07_A029 3', mRNA sequence
Length = 818
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 231 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 290
Query: 403 cagtcc 408
||||||
Sbjct: 291 cagtcc 296
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 60 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 100
>gb|CO164307.1|CO164307 FLD1_47_D11.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_47_D11_A029 3', mRNA sequence
Length = 796
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 536 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 477
Query: 403 cagtcc 408
||||||
Sbjct: 476 cagtcc 471
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 707 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 667
>gb|CO164379.1|CO164379 FLD1_47_D11.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_47_D11_A029 5', mRNA sequence
Length = 819
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 553 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 494
Query: 403 cagtcc 408
||||||
Sbjct: 493 cagtcc 488
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 724 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 684
>gb|CO165679.1|CO165679 FLD1_56_F06.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_56_F06_A029 3', mRNA sequence
Length = 812
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 484 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 425
Query: 403 cagtcc 408
||||||
Sbjct: 424 cagtcc 419
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 655 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 615
>gb|CO165748.1|CO165748 FLD1_56_F06.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_56_F06_A029 5', mRNA sequence
Length = 783
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 589 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 530
Query: 403 cagtcc 408
||||||
Sbjct: 529 cagtcc 524
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 760 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 720
>gb|CO410191.1|CO410191 EST840576 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAKZ86 5' end, mRNA sequence
Length = 850
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 295 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 354
Query: 403 cagtcc 408
||||||
Sbjct: 355 cagtcc 360
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 124 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 164
>gb|CO411964.1|CO411964 EST842349 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIALR15 5' end, mRNA sequence
Length = 825
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 323 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 382
Query: 403 cagtcc 408
||||||
Sbjct: 383 cagtcc 388
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 152 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 192
>gb|CO413076.1|CO413076 EST843461 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAM581 5' end, mRNA sequence
Length = 632
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 323 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 382
Query: 403 cagtcc 408
||||||
Sbjct: 383 cagtcc 388
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 152 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 192
>gb|CO413545.1|CO413545 EST843930 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAMC29 5' end, mRNA sequence
Length = 881
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 314 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 373
Query: 403 cagtcc 408
||||||
Sbjct: 374 cagtcc 379
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 143 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 183
>gb|CO362878.1|CO362878 RTK1_6_G05.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_6_G05_A029 3', mRNA sequence
Length = 717
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 166 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 225
Query: 403 cagtcc 408
||||||
Sbjct: 226 cagtcc 231
>gb|CO362963.1|CO362963 RTK1_6_G05.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_6_G05_A029 5', mRNA sequence
Length = 676
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 277 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 336
Query: 403 cagtcc 408
||||||
Sbjct: 337 cagtcc 342
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 106 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 146
>gb|CO364377.1|CO364377 RTK1_15_H04.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_15_H04_A029 3', mRNA sequence
Length = 877
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 269 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 328
Query: 403 cagtcc 408
||||||
Sbjct: 329 cagtcc 334
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 98 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 138
>gb|CO370268.1|CO370268 RTK1_66_F02.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_66_F02_A029 5', mRNA sequence
Length = 396
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 252 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 311
Query: 403 cagtcc 408
||||||
Sbjct: 312 cagtcc 317
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 81 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 121
>gb|CV034323.1|CV034323 RTNACL1_40_D07.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_40_D07_A029 3', mRNA sequence
Length = 670
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 413 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 354
Query: 403 cagtcc 408
||||||
Sbjct: 353 cagtcc 348
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 584 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 544
>gb|CV034392.1|CV034392 RTNACL1_40_D07.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_40_D07_A029 5', mRNA sequence
Length = 743
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 554 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 495
Query: 403 cagtcc 408
||||||
Sbjct: 494 cagtcc 489
Score = 50.1 bits (25), Expect = 2e-004
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 172 taccgttgcttcgttggcggcctcgcctgggccaccgacga 212
|||||||||||||| || || ||||| ||||||||||||||
Sbjct: 725 taccgttgcttcgtcgggggtctcgcttgggccaccgacga 685
>gb|CV134425.1|CV134425 EST845634 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIATD08 5' end, mRNA sequence
Length = 613
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 528 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 469
Query: 403 cagtcc 408
||||||
Sbjct: 468 cagtcc 463
>gb|CV136377.1|CV136377 EST847586 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIAA74 5' end, mRNA sequence
Length = 861
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 305 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 364
Query: 403 cagtcc 408
||||||
Sbjct: 365 cagtcc 370
>gb|CV136381.1|CV136381 EST847590 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIAA80 5' end, mRNA sequence
Length = 487
Score = 60.0 bits (30), Expect = 2e-007
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 343 gccatcgagggcatgaacggcaaggagctcgacggccgcaacatcaccgttaacgaggcc 402
|||||||| | |||||||||||||| |||||||||| | |||||||| ||||| ||||
Sbjct: 34 gccatcgatgccatgaacggcaaggtgctcgacggcaggaacatcactgttaatccggcc 93
Query: 403 cagtcc 408
||||||
Sbjct: 94 cagtcc 99
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 120,156
Number of Sequences: 355925
Number of extensions: 120156
Number of successful extensions: 41917
Number of sequences better than 0.5: 299
Number of HSP's better than 0.5 without gapping: 299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40030
Number of HSP's gapped (non-prelim): 1605
length of query: 863
length of database: 217,277,237
effective HSP length: 19
effective length of query: 844
effective length of database: 210,514,662
effective search space: 177674374728
effective search space used: 177674374728
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)