BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.489
(1666 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF665508.1|CF665508 RTCNT1_16_A06.g1_A029 Root control P... 192 3e-047
gb|CV036619.1|CV036619 RTNACL1_60_B12.g1_A029 Roots plus ad... 168 5e-040
gb|BQ634287.1|BQ634287 NXRV067_A07_F NXRV (Nsf Xylem Root w... 165 7e-039
gb|CF394023.1|CF394023 RTDS2_2_E04.g1_A021 Drought-stressed... 165 7e-039
gb|CO164871.1|CO164871 FLD1_50_G08.g1_A029 Root flooded Pin... 165 7e-039
gb|CO167141.1|CO167141 FLD1_67_D01.b1_A029 Root flooded Pin... 165 7e-039
gb|DR019041.1|DR019041 STRS1_27_A10.g1_A034 Shoot tip pitch... 165 7e-039
gb|DR055331.1|DR055331 RTCA1_23_B04.b1_A029 Roots minus cal... 165 7e-039
gb|DR119088.1|DR119088 RTMG1_21_C02.b1_A029 Roots minus mag... 165 7e-039
gb|DR165853.1|DR165853 RTPHOS1_7_F02.g1_A029 Roots minus ph... 165 7e-039
gb|DR386244.1|DR386244 RTHG1_13_G10.g1_A029 Roots plus adde... 165 7e-039
gb|DR742100.1|DR742100 RTCU1_1_E12.g1_A029 Roots plus added... 161 1e-037
gb|DR742109.1|DR742109 RTCU1_1_F12.g1_A029 Roots plus added... 161 1e-037
gb|DR745200.1|DR745200 RTCU1_27_E11.g1_A029 Roots plus adde... 161 1e-037
gb|BQ634709.1|BQ634709 NXRV072_C12_F NXRV (Nsf Xylem Root w... 159 4e-037
gb|BX784188.1|BX784188 BX784188 Pinus pinaster differenciat... 159 4e-037
gb|DR072361.1|DR072361 RTDK1_25_F11.g1_A029 Roots, dark Pin... 159 4e-037
gb|CF663717.1|CF663717 RTCNT1_4_E08.g1_A029 Root control Pi... 157 2e-036
gb|DR050316.1|DR050316 RTBOR1_22_D10.g1_A029 Roots plus add... 157 2e-036
gb|DR117547.1|DR117547 RTMG1_7_D06.g1_A029 Roots minus magn... 157 2e-036
gb|DR385595.1|DR385595 RTHG1_9_D06.g1_A029 Roots plus added... 157 2e-036
gb|BF610148.1|BF610148 NXSI_055_C08_F NXSI (Nsf Xylem Side ... 155 7e-036
gb|DR081289.1|DR081289 RTFEPL1_28_D04.g1_A029 Roots plus ad... 153 3e-035
gb|BQ634705.1|BQ634705 NXRV072_C08_F NXRV (Nsf Xylem Root w... 151 1e-034
gb|CF474863.1|CF474863 RTWW2_8_E08.g1_A021 Well-watered lob... 151 1e-034
gb|CO163260.1|CO163260 FLD1_40_B01.g1_A029 Root flooded Pin... 151 1e-034
gb|CO414444.1|CO414444 EST844829 Sequencing ESTs from loblo... 151 1e-034
gb|DN451745.1|DN451745 EST947544 Sequencing ESTs from loblo... 151 1e-034
gb|DN457387.1|DN457387 EST953186 Sequencing ESTs from loblo... 151 1e-034
gb|DN460975.1|DN460975 EST956774 Sequencing ESTs from loblo... 151 1e-034
gb|DN465628.1|DN465628 EST961427 Sequencing ESTs from loblo... 151 1e-034
gb|DT625022.1|DT625022 EST1159297 Sequencing ESTs from lobl... 151 1e-034
gb|DT627448.1|DT627448 EST1160524 Sequencing ESTs from lobl... 151 1e-034
gb|BQ634195.1|BQ634195 NXRV064_H09_F NXRV (Nsf Xylem Root w... 149 4e-034
gb|BQ634579.1|BQ634579 NXRV070_F11_F NXRV (Nsf Xylem Root w... 149 4e-034
gb|CF396995.1|CF396995 RTDS2_25_B08.g1_A021 Drought-stresse... 149 4e-034
gb|CO367254.1|CO367254 RTK1_33_E04.b1_A029 Roots minus pota... 149 4e-034
gb|DN457452.1|DN457452 EST953251 Sequencing ESTs from loblo... 149 4e-034
gb|AI812944.1|AI812944 22G12 Pine Lambda Zap Xylem library ... 147 2e-033
gb|DR387015.1|DR387015 RTHG1_18_G07.g1_A029 Roots plus adde... 147 2e-033
gb|BF169906.1|BF169906 NXCI_127_H07_F NXCI (Nsf Xylem Compr... 145 7e-033
gb|BQ634283.1|BQ634283 NXRV067_A03_F NXRV (Nsf Xylem Root w... 145 7e-033
gb|BQ634601.1|BQ634601 NXRV070_H12_F NXRV (Nsf Xylem Root w... 145 7e-033
gb|DN458978.1|DN458978 EST954777 Sequencing ESTs from loblo... 143 3e-032
gb|DR015317.1|DR015317 STRS1_2_F07.g1_A034 Shoot tip pitch ... 143 3e-032
gb|BQ633798.1|BQ633798 NXRV060_H04_F NXRV (Nsf Xylem Root w... 141 1e-031
gb|CF395120.1|CF395120 RTDS2_9_A02.g1_A021 Drought-stressed... 141 1e-031
gb|CO162784.1|CO162784 FLD1_37_B04.g1_A029 Root flooded Pin... 141 1e-031
gb|DN456821.1|DN456821 EST952620 Sequencing ESTs from loblo... 139 4e-031
gb|BX249370.1|BX249370 BX249370 Pinus pinaster differenciat... 137 2e-030
gb|BF049640.1|BF049640 NXCI_108_D04_F NXCI (Nsf Xylem Compr... 137 2e-030
gb|BM133906.1|BM133906 NXLV_014_A03_F NXLV (Nsf Xylem Late ... 137 2e-030
gb|BQ291272.1|BQ291272 NXRV058_B02_F NXRV (Nsf Xylem Root w... 137 2e-030
gb|BQ291438.1|BQ291438 NXRV059_B03_F NXRV (Nsf Xylem Root w... 137 2e-030
gb|BQ633794.1|BQ633794 NXRV060_G12_F NXRV (Nsf Xylem Root w... 137 2e-030
gb|BQ633829.1|BQ633829 NXRV061_D03_F NXRV (Nsf Xylem Root w... 137 2e-030
gb|BQ633964.1|BQ633964 NXRV063_A07_F NXRV (Nsf Xylem Root w... 137 2e-030
gb|BQ634246.1|BQ634246 NXRV066_E11_F NXRV (Nsf Xylem Root w... 137 2e-030
gb|BQ634282.1|BQ634282 NXRV067_A02_F NXRV (Nsf Xylem Root w... 137 2e-030
gb|BQ634365.1|BQ634365 NXRV068_A11_F NXRV (Nsf Xylem Root w... 137 2e-030
gb|BQ634416.1|BQ634416 NXRV068_F08_F NXRV (Nsf Xylem Root w... 137 2e-030
gb|BQ634437.1|BQ634437 NXRV068_H09_F NXRV (Nsf Xylem Root w... 137 2e-030
gb|BQ634588.1|BQ634588 NXRV070_G09_F NXRV (Nsf Xylem Root w... 137 2e-030
gb|BQ634688.1|BQ634688 NXRV072_A09_F NXRV (Nsf Xylem Root w... 137 2e-030
gb|BQ634789.1|BQ634789 NXRV073_C04_F NXRV (Nsf Xylem Root w... 137 2e-030
gb|BQ634799.1|BQ634799 NXRV073_D02_F NXRV (Nsf Xylem Root w... 137 2e-030
gb|BQ634819.1|BQ634819 NXRV073_E11_F NXRV (Nsf Xylem Root w... 137 2e-030
gb|BQ634896.1|BQ634896 NXRV074_D12_F NXRV (Nsf Xylem Root w... 137 2e-030
gb|BQ634933.1|BQ634933 NXRV074_H08_F NXRV (Nsf Xylem Root w... 137 2e-030
gb|BQ634991.1|BQ634991 NXRV075_E11_F NXRV (Nsf Xylem Root w... 137 2e-030
gb|CF392059.1|CF392059 RTDR3_12_A05.g1_A022 Loblolly pine r... 137 2e-030
gb|CF397322.1|CF397322 RTDS3_2_C10.g1_A022 Drought-stressed... 137 2e-030
gb|CF475717.1|CF475717 RTWW2_11_F09.g1_A021 Well-watered lo... 137 2e-030
gb|CF479006.1|CF479006 RTWW3_21_C01.g1_A022 Well-watered lo... 137 2e-030
gb|CF666125.1|CF666125 RTCNT1_21_B01.b1_A029 Root control P... 137 2e-030
gb|CF672900.1|CF672900 RTCNT1_74_E08.g1_A029 Root control P... 137 2e-030
gb|CN784059.1|CN784059 EST782750 Sequencing ESTs from loblo... 137 2e-030
gb|CN784669.1|CN784669 EST783360 Sequencing ESTs from loblo... 137 2e-030
gb|CO198476.1|CO198476 GEO1_14_A08.b1_A029 Root gravitropis... 137 2e-030
gb|CO410705.1|CO410705 EST841090 Sequencing ESTs from loblo... 137 2e-030
gb|CO370474.1|CO370474 RTK1_68_D04.b1_A029 Roots minus pota... 137 2e-030
gb|CV135398.1|CV135398 EST846607 Sequencing ESTs from loblo... 137 2e-030
gb|CV135705.1|CV135705 EST846914 Sequencing ESTs from loblo... 137 2e-030
gb|CV136681.1|CV136681 EST847890 Sequencing ESTs from loblo... 137 2e-030
gb|CV139145.1|CV139145 EST850354 Sequencing ESTs from loblo... 137 2e-030
gb|CV143487.1|CV143487 EST854696 Sequencing ESTs from loblo... 137 2e-030
gb|CV143580.1|CV143580 EST854789 Sequencing ESTs from loblo... 137 2e-030
gb|CV144621.1|CV144621 EST855830 Sequencing ESTs from loblo... 137 2e-030
gb|CV145023.1|CV145023 EST856232 Sequencing ESTs from loblo... 137 2e-030
gb|CV146487.1|CV146487 EST857696 Sequencing ESTs from loblo... 137 2e-030
gb|CV146533.1|CV146533 EST857742 Sequencing ESTs from loblo... 137 2e-030
gb|CV146671.1|CV146671 EST857880 Sequencing ESTs from loblo... 137 2e-030
gb|CV147199.1|CV147199 EST858408 Sequencing ESTs from loblo... 137 2e-030
gb|CX648563.1|CX648563 COLD1_29_A11.g1_A029 Root cold Pinus... 137 2e-030
gb|CX650576.1|CX650576 COLD1_46_D07.g1_A029 Root cold Pinus... 137 2e-030
gb|CX715106.1|CX715106 RTPQ1_31_G11.b1_A032 Roots treated w... 137 2e-030
gb|DN450569.1|DN450569 EST946368 Sequencing ESTs from loblo... 137 2e-030
gb|DN450769.1|DN450769 EST946568 Sequencing ESTs from loblo... 137 2e-030
gb|DN451693.1|DN451693 EST947492 Sequencing ESTs from loblo... 137 2e-030
gb|DN453264.1|DN453264 EST949063 Sequencing ESTs from loblo... 137 2e-030
gb|DN453422.1|DN453422 EST949221 Sequencing ESTs from loblo... 137 2e-030
gb|DN460159.1|DN460159 EST955958 Sequencing ESTs from loblo... 137 2e-030
gb|DN460354.1|DN460354 EST956153 Sequencing ESTs from loblo... 137 2e-030
gb|DN462130.1|DN462130 EST957929 Sequencing ESTs from loblo... 137 2e-030
gb|DN462378.1|DN462378 EST958177 Sequencing ESTs from loblo... 137 2e-030
gb|DN465607.1|DN465607 EST961406 Sequencing ESTs from loblo... 137 2e-030
gb|DR019503.1|DR019503 STRS1_30_B02.g1_A034 Shoot tip pitch... 137 2e-030
gb|DR048278.1|DR048278 RTBOR1_7_E06.g2_A029 Roots plus adde... 137 2e-030
gb|DR060402.1|DR060402 RTNIT1_27_C12.g1_A029 Roots minus ni... 137 2e-030
gb|DR088954.1|DR088954 RTAL1_5_E05.g1_A029 Roots plus added... 137 2e-030
gb|DR090601.1|DR090601 RTAL1_16_E05.b1_A029 Roots plus adde... 137 2e-030
gb|DR165415.1|DR165415 RTPHOS1_4_H11.g1_A029 Roots minus ph... 137 2e-030
gb|DR181434.1|DR181434 RTMNUT1_38_H12.g2_A029 Roots minus m... 137 2e-030
gb|DR742221.1|DR742221 RTCU1_2_C09.g1_A029 Roots plus added... 137 2e-030
gb|BQ634840.1|BQ634840 NXRV073_G10_F NXRV (Nsf Xylem Root w... 133 3e-029
gb|BX251009.1|BX251009 BX251009 Pinus pinaster differenciat... 131 1e-028
gb|BQ634699.1|BQ634699 NXRV072_C01_F NXRV (Nsf Xylem Root w... 131 1e-028
gb|BQ634723.1|BQ634723 NXRV072_E04_F NXRV (Nsf Xylem Root w... 131 1e-028
gb|DR089689.1|DR089689 RTAL1_10_E12.b1_A029 Roots plus adde... 131 1e-028
gb|BQ634010.1|BQ634010 NXRV063_F10_F NXRV (Nsf Xylem Root w... 129 4e-028
gb|CO170879.1|CO170879 NDL1_17_C09.g1_A029 Needles control ... 129 4e-028
gb|CO370412.1|CO370412 RTK1_67_E10.g1_A029 Roots minus pota... 129 4e-028
gb|DR015133.1|DR015133 STRS1_1_E06.g1_A034 Shoot tip pitch ... 129 4e-028
gb|DR015725.1|DR015725 STRS1_5_F07.b1_A034 Shoot tip pitch ... 129 4e-028
gb|DR023615.1|DR023615 STRS1_58_H07.g1_A034 Shoot tip pitch... 129 4e-028
gb|BQ291314.1|BQ291314 NXRV058_F01_F NXRV (Nsf Xylem Root w... 127 2e-027
gb|BQ634021.1|BQ634021 NXRV063_G10_F NXRV (Nsf Xylem Root w... 127 2e-027
gb|CV036226.1|CV036226 RTNACL1_57_D06.g1_A029 Roots plus ad... 127 2e-027
gb|DR024290.1|DR024290 STRS1_63_G12.g1_A034 Shoot tip pitch... 125 6e-027
gb|BQ634581.1|BQ634581 NXRV070_G02_F NXRV (Nsf Xylem Root w... 123 2e-026
gb|CV138640.1|CV138640 EST849849 Sequencing ESTs from loblo... 123 2e-026
gb|DN454358.1|DN454358 EST950157 Sequencing ESTs from loblo... 123 2e-026
gb|DN461170.1|DN461170 EST956969 Sequencing ESTs from loblo... 123 2e-026
gb|DR095954.1|DR095954 STRR1_24_F04.g1_A033 Stem Response R... 119 4e-025
gb|CV036552.1|CV036552 RTNACL1_60_B12.b1_A029 Roots plus ad... 117 2e-024
gb|CF395706.1|CF395706 RTDS2_16_F06.g1_A021 Drought-stresse... 115 6e-024
gb|CF664627.1|CF664627 RTCNT1_11_B06.b1_A029 Root control P... 115 6e-024
gb|BQ633946.1|BQ633946 NXRV062_G08_F NXRV (Nsf Xylem Root w... 113 2e-023
gb|BQ634505.1|BQ634505 NXRV069_G06_F NXRV (Nsf Xylem Root w... 113 2e-023
gb|DR019436.1|DR019436 STRS1_30_B05.b1_A034 Shoot tip pitch... 113 2e-023
gb|BQ634048.1|BQ634048 NXRV065_B03_F NXRV (Nsf Xylem Root w... 111 9e-023
gb|DR165772.1|DR165772 RTPHOS1_7_F02.b1_A029 Roots minus ph... 111 9e-023
gb|DR745129.1|DR745129 RTCU1_27_E11.b1_A029 Roots plus adde... 111 9e-023
gb|CO163180.1|CO163180 FLD1_40_B01.b1_A029 Root flooded Pin... 107 1e-021
gb|CO162703.1|CO162703 FLD1_37_B04.b1_A029 Root flooded Pin... 105 6e-021
gb|CO198700.1|CO198700 GEO1_15_G10.g1_A029 Root gravitropis... 105 6e-021
gb|DR117464.1|DR117464 RTMG1_7_D06.b1_A029 Roots minus magn... 105 6e-021
gb|DR119157.1|DR119157 RTMG1_21_C02.g1_A029 Roots minus mag... 105 6e-021
gb|BQ106776.1|BQ106776 NXLV089_C10_F NXLV (Nsf Xylem Late w... 103 2e-020
gb|BX682912.1|BX682912 BX682912 Pinus pinaster differenciat... 101 9e-020
gb|DR022357.1|DR022357 STRS1_50_B12.g1_A034 Shoot tip pitch... 100 4e-019
gb|BQ634425.1|BQ634425 NXRV068_G05_F NXRV (Nsf Xylem Root w... 98 1e-018
gb|BQ634611.1|BQ634611 NXRV071_A12_F NXRV (Nsf Xylem Root w... 98 1e-018
gb|CO365340.1|CO365340 RTK1_25_C10.b1_A029 Roots minus pota... 98 1e-018
gb|DR050236.1|DR050236 RTBOR1_22_D10.b1_A029 Roots plus add... 98 1e-018
gb|DR744291.1|DR744291 RTCU1_21_B02.g1_A029 Roots plus adde... 98 1e-018
gb|CO370312.1|CO370312 RTK1_67_C05.b1_A029 Roots minus pota... 94 2e-017
gb|DR092693.1|DR092693 STRR1_3_E02.b1_A033 Stem Response Re... 94 2e-017
gb|DR094847.1|DR094847 STRR1_17_D09.b1_A033 Stem Response R... 94 2e-017
gb|CF479371.1|CF479371 RTWW3_23_G07.g1_A022 Well-watered lo... 92 9e-017
gb|BQ634373.1|BQ634373 NXRV068_B07_F NXRV (Nsf Xylem Root w... 90 3e-016
gb|CF396141.1|CF396141 RTDS2_13_C12.g1_A021 Drought-stresse... 90 3e-016
gb|DR015050.1|DR015050 STRS1_1_E06.b1_A034 Shoot tip pitch ... 88 1e-015
gb|CF391955.1|CF391955 RTDR3_12_A05.b1_A022 Loblolly pine r... 86 5e-015
gb|CF393123.1|CF393123 RTDR3_17_F03.b1_A022 Loblolly pine r... 86 5e-015
gb|CF393207.1|CF393207 RTDR3_17_A05.g1_A022 Loblolly pine r... 86 5e-015
gb|CF663638.1|CF663638 RTCNT1_4_E08.b1_A029 Root control Pi... 86 5e-015
gb|CF664953.1|CF664953 RTCNT1_13_A06.b1_A029 Root control P... 86 5e-015
gb|CF667646.1|CF667646 RTCNT1_31_D11.g1_A029 Root control P... 86 5e-015
gb|CF672828.1|CF672828 RTCNT1_74_E08.b1_A029 Root control P... 86 5e-015
gb|CO164789.1|CO164789 FLD1_50_G08.b1_A029 Root flooded Pin... 86 5e-015
gb|CO167214.1|CO167214 FLD1_67_D01.g1_A029 Root flooded Pin... 86 5e-015
gb|CO174346.1|CO174346 NDL1_43_A11.g1_A029 Needles control ... 86 5e-015
gb|CO198151.1|CO198151 GEO1_11_D06.g1_A029 Root gravitropis... 86 5e-015
gb|CO198640.1|CO198640 GEO1_15_G10.b1_A029 Root gravitropis... 86 5e-015
gb|CO198839.1|CO198839 GEO1_17_A08.b1_A029 Root gravitropis... 86 5e-015
gb|CO370549.1|CO370549 RTK1_68_D04.g1_A029 Roots minus pota... 86 5e-015
gb|CX648487.1|CX648487 COLD1_29_A11.b1_A029 Root cold Pinus... 86 5e-015
gb|CX651399.1|CX651399 COLD1_52_D06.b1_A029 Root cold Pinus... 86 5e-015
gb|DR015930.1|DR015930 STRS1_6_C10.g1_A034 Shoot tip pitch ... 86 5e-015
gb|DR019434.1|DR019434 STRS1_30_B02.b1_A034 Shoot tip pitch... 86 5e-015
gb|DR023542.1|DR023542 STRS1_58_H07.b1_A034 Shoot tip pitch... 86 5e-015
gb|DR049913.1|DR049913 RTBOR1_20_A01.b1_A029 Roots plus add... 86 5e-015
gb|DR049974.1|DR049974 RTBOR1_20_A01.g1_A029 Roots plus add... 86 5e-015
gb|DR055669.1|DR055669 RTCA1_25_D10.b1_A029 Roots minus cal... 86 5e-015
gb|DR072378.1|DR072378 RTDK1_26_A04.b1_A029 Roots, dark Pin... 86 5e-015
gb|DR089774.1|DR089774 RTAL1_10_E12.g1_A029 Roots plus adde... 86 5e-015
gb|DR092259.1|DR092259 RTAL1_28_A09.b1_A029 Roots plus adde... 86 5e-015
gb|DR095718.1|DR095718 STRR1_23_D08.b1_A033 Stem Response R... 86 5e-015
gb|DR100799.1|DR100799 STRR1_68_D06.b1_A033 Stem Response R... 86 5e-015
gb|DR101356.1|DR101356 STRR1_72_G11.b1_A033 Stem Response R... 86 5e-015
gb|DR102518.1|DR102518 STRR1_81_E08.g1_A033 Stem Response R... 86 5e-015
gb|DR112407.1|DR112407 RTS1_28_B05.b1_A029 Roots minus sulf... 86 5e-015
gb|DR181355.1|DR181355 RTMNUT1_38_H12.b2_A029 Roots minus m... 86 5e-015
gb|DR385328.1|DR385328 RTHG1_8_B04.b1_A029 Roots plus added... 86 5e-015
gb|DR385514.1|DR385514 RTHG1_9_D06.b1_A029 Roots plus added... 86 5e-015
gb|DR386120.1|DR386120 RTHG1_13_C06.b1_A029 Roots plus adde... 86 5e-015
gb|DR386200.1|DR386200 RTHG1_13_C06.g1_A029 Roots plus adde... 86 5e-015
gb|DR742910.1|DR742910 RTCU1_7_F11.g2_A029 Roots plus added... 86 5e-015
gb|BQ633865.1|BQ633865 NXRV061_G10_F NXRV (Nsf Xylem Root w... 84 2e-014
gb|BQ634047.1|BQ634047 NXRV065_B02_F NXRV (Nsf Xylem Root w... 84 2e-014
gb|BQ634164.1|BQ634164 NXRV064_E09_F NXRV (Nsf Xylem Root w... 84 2e-014
gb|DR742023.1|DR742023 RTCU1_1_E12.b1_A029 Roots plus added... 84 2e-014
gb|BX253436.1|BX253436 BX253436 Pinus pinaster differenciat... 82 8e-014
gb|BX682783.1|BX682783 BX682783 Pinus pinaster differenciat... 82 8e-014
gb|DR742032.1|DR742032 RTCU1_1_F12.b1_A029 Roots plus added... 82 8e-014
gb|CO369280.1|CO369280 RTK1_46_D01.b1_A029 Roots minus pota... 80 3e-013
gb|BQ196885.1|BQ196885 NXLV106_E09_F NXLV (Nsf Xylem Late w... 78 1e-012
gb|BQ196977.1|BQ196977 NXLV107_G10_F NXLV (Nsf Xylem Late w... 78 1e-012
gb|CF390989.1|CF390989 RTDR3_3_H05.b1_A022 Loblolly pine ro... 78 1e-012
gb|CF391457.1|CF391457 RTDR3_9_F08.b1_A022 Loblolly pine ro... 78 1e-012
gb|CF394977.1|CF394977 RTDS2_8_B01.g1_A021 Drought-stressed... 78 1e-012
gb|CF396949.1|CF396949 RTDS2_25_B08.b1_A021 Drought-stresse... 78 1e-012
gb|CF474827.1|CF474827 RTWW2_8_E08.b1_A021 Well-watered lob... 78 1e-012
gb|CF475433.1|CF475433 RTWW2_12_G08.b1_A021 Well-watered lo... 78 1e-012
gb|CF475582.1|CF475582 RTWW2_11_F09.b1_A021 Well-watered lo... 78 1e-012
gb|CF478918.1|CF478918 RTWW3_21_A01.b1_A022 Well-watered lo... 78 1e-012
gb|CF479261.1|CF479261 RTWW3_23_G07.b1_A022 Well-watered lo... 78 1e-012
gb|CO160100.1|CO160100 FLD1_18_H03.b1_A029 Root flooded Pin... 78 1e-012
gb|CO170812.1|CO170812 NDL1_17_C09.b1_A029 Needles control ... 78 1e-012
gb|CO369566.1|CO369566 RTK1_48_C03.b1_A029 Roots minus pota... 78 1e-012
gb|CO370335.1|CO370335 RTK1_67_E10.b1_A029 Roots minus pota... 78 1e-012
gb|CX650502.1|CX650502 COLD1_46_D07.b1_A029 Root cold Pinus... 78 1e-012
gb|DR018960.1|DR018960 STRS1_27_A10.b1_A034 Shoot tip pitch... 78 1e-012
gb|DR019324.1|DR019324 STRS1_29_F01.b1_A034 Shoot tip pitch... 78 1e-012
gb|DR019506.1|DR019506 STRS1_30_B05.g1_A034 Shoot tip pitch... 78 1e-012
gb|DR022286.1|DR022286 STRS1_50_B12.b1_A034 Shoot tip pitch... 78 1e-012
gb|DR049795.1|DR049795 RTBOR1_19_D05.b1_A029 Roots plus add... 78 1e-012
gb|DR054087.1|DR054087 RTCA1_15_D12.b1_A029 Roots minus cal... 78 1e-012
gb|DR054171.1|DR054171 RTCA1_15_D12.g1_A029 Roots minus cal... 78 1e-012
gb|DR058806.1|DR058806 RTNIT1_14_B03.b1_A029 Roots minus ni... 78 1e-012
gb|DR060319.1|DR060319 RTNIT1_27_C12.b1_A029 Roots minus ni... 78 1e-012
gb|DR060584.1|DR060584 RTNIT1_28_F03.g1_A029 Roots minus ni... 78 1e-012
gb|DR090676.1|DR090676 RTAL1_16_E05.g1_A029 Roots plus adde... 78 1e-012
gb|DR099736.1|DR099736 STRR1_58_D07.b1_A033 Stem Response R... 78 1e-012
gb|DR386162.1|DR386162 RTHG1_13_G10.b1_A029 Roots plus adde... 78 1e-012
gb|DR388036.1|DR388036 RTHG1_25_F08.g1_A029 Roots plus adde... 78 1e-012
gb|CO198912.1|CO198912 GEO1_17_A08.g1_A029 Root gravitropis... 76 5e-012
gb|BQ291474.1|BQ291474 NXRV059_E10_F NXRV (Nsf Xylem Root w... 72 8e-011
gb|CF391568.1|CF391568 RTDR3_9_F08.g1_A022 Loblolly pine ro... 72 8e-011
gb|CF668455.1|CF668455 RTCNT1_36_C10.g1_A029 Root control P... 72 8e-011
gb|DR072460.1|DR072460 RTDK1_26_A04.g1_A029 Roots, dark Pin... 72 8e-011
gb|DR100832.1|DR100832 STRR1_68_D06.g1_A033 Stem Response R... 72 8e-011
gb|DR109772.1|DR109772 RTS1_4_E10.g1_A029 Roots minus sulfu... 72 8e-011
gb|DR018971.1|DR018971 STRS1_27_B10.b1_A034 Shoot tip pitch... 70 3e-010
gb|DR109585.1|DR109585 RTS1_3_F11.b1_A029 Roots minus sulfu... 70 3e-010
gb|AA556353.1|AA556353 208 Loblolly pine C Pinus taeda cDNA... 68 1e-009
gb|BQ290867.1|BQ290867 NXRV050_F06_F NXRV (Nsf Xylem Root w... 68 1e-009
gb|BQ291465.1|BQ291465 NXRV059_D11_F NXRV (Nsf Xylem Root w... 68 1e-009
gb|CF396120.1|CF396120 RTDS2_13_H06.g1_A021 Drought-stresse... 68 1e-009
gb|DR018826.1|DR018826 STRS1_26_A10.b2_A034 Shoot tip pitch... 68 1e-009
gb|BX249096.1|BX249096 BX249096 Pinus pinaster differenciat... 66 5e-009
gb|BQ635001.1|BQ635001 NXRV075_F12_F NXRV (Nsf Xylem Root w... 66 5e-009
gb|CF391125.1|CF391125 RTDR3_4_H08.b1_A022 Loblolly pine ro... 66 5e-009
gb|CF391267.1|CF391267 RTDR3_4_H08.g1_A022 Loblolly pine ro... 66 5e-009
gb|CF667418.1|CF667418 RTCNT1_30_D03.b1_A029 Root control P... 66 5e-009
gb|CF667489.1|CF667489 RTCNT1_30_D03.g1_A029 Root control P... 66 5e-009
gb|CO363287.1|CO363287 RTK1_8_F11.g1_A029 Roots minus potas... 66 5e-009
gb|DR054424.1|DR054424 RTCA1_17_F04.b1_A029 Roots minus cal... 66 5e-009
gb|DR092747.1|DR092747 STRR1_3_E02.g1_A033 Stem Response Re... 66 5e-009
gb|DR095881.1|DR095881 STRR1_24_F04.b1_A033 Stem Response R... 66 5e-009
gb|AA740032.1|AA740032 797 PtIFG2 Pinus taeda cDNA clone 92... 64 2e-008
gb|BG040865.1|BG040865 NXSI_116_A11_F NXSI (Nsf Xylem Side ... 64 2e-008
gb|BQ634157.1|BQ634157 NXRV064_D12_F NXRV (Nsf Xylem Root w... 64 2e-008
gb|CF665029.1|CF665029 RTCNT1_13_A06.g1_A029 Root control P... 64 2e-008
gb|CF665425.1|CF665425 RTCNT1_16_A06.b1_A029 Root control P... 64 2e-008
gb|DR088873.1|DR088873 RTAL1_5_E05.b1_A029 Roots plus added... 64 2e-008
gb|BX249873.1|BX249873 BX249873 Pinus pinaster differenciat... 62 8e-008
gb|BQ634608.1|BQ634608 NXRV071_A08_F NXRV (Nsf Xylem Root w... 62 8e-008
gb|CF473083.1|CF473083 RTDS1_1_G06.g1_A015 Drought-stressed... 62 8e-008
gb|CF475563.1|CF475563 RTWW2_12_G08.g1_A021 Well-watered lo... 62 8e-008
gb|DR109721.1|DR109721 RTS1_4_E10.b1_A029 Roots minus sulfu... 62 8e-008
gb|BQ634392.1|BQ634392 NXRV068_D05_F NXRV (Nsf Xylem Root w... 60 3e-007
gb|BM367365.1|BM367365 NXLV_048_C05_F NXLV (Nsf Xylem Late ... 58 1e-006
gb|CF473029.1|CF473029 RTDS1_1_G06.b1_A015 Drought-stressed... 58 1e-006
gb|BF518192.1|BF518192 NXSI_036_B11_F NXSI (Nsf Xylem Side ... 56 5e-006
gb|BQ634922.1|BQ634922 NXRV074_G08_F NXRV (Nsf Xylem Root w... 56 5e-006
gb|BX255255.1|BX255255 BX255255 Pinus pinaster differenciat... 54 2e-005
gb|BF517646.1|BF517646 NXSI_028_C04_F NXSI (Nsf Xylem Side ... 54 2e-005
gb|BM493762.1|BM493762 NXLV_067_C01_F NXLV (Nsf Xylem Late ... 54 2e-005
gb|BM903034.1|BM903034 NXLV_078_D07_F NXLV (Nsf Xylem Late ... 54 2e-005
gb|CF393948.1|CF393948 RTDS2_2_E04.b1_A021 Drought-stressed... 54 2e-005
gb|CF395036.1|CF395036 RTDS2_9_A02.b1_A021 Drought-stressed... 54 2e-005
gb|CX650615.1|CX650615 COLD1_46_H05.g1_A029 Root cold Pinus... 54 2e-005
gb|BQ106864.1|BQ106864 NXLV082_C10_F NXLV (Nsf Xylem Late w... 52 8e-005
gb|CO369362.1|CO369362 RTK1_46_D01.g1_A029 Roots minus pota... 52 8e-005
gb|DN629979.1|DN629979 EST980795 Subtracted pine embryo lib... 52 8e-005
gb|DR163073.1|DR163073 RTFE1_24_B05.g1_A029 Roots minus iro... 52 8e-005
gb|DT630192.1|DT630192 EST1154604 Subtracted pine embryo li... 52 8e-005
gb|BQ634898.1|BQ634898 NXRV074_E02_F NXRV (Nsf Xylem Root w... 48 0.001
gb|BX677794.1|BX677794 BX677794 RN Pinus pinaster cDNA clon... 48 0.001
gb|CR392211.1|CR392211 CR392211 RN Pinus pinaster cDNA clon... 48 0.001
gb|CF397218.1|CF397218 RTDS3_2_C10.b2_A022 Drought-stressed... 46 0.005
gb|DR102019.1|DR102019 STRR1_77_C01.g1_A033 Stem Response R... 46 0.005
gb|DR112763.1|DR112763 RTS1_30_A05.g1_A029 Roots minus sulf... 46 0.005
gb|BG317659.1|BG317659 NXPV_004_C11_F NXPV (Nsf Xylem Plani... 44 0.018
gb|BQ290718.1|BQ290718 NXRV048_G03_F NXRV (Nsf Xylem Root w... 42 0.072
gb|BF778720.1|BF778720 NXSI_086_C06_F NXSI (Nsf Xylem Side ... 40 0.29
gb|BM903372.1|BM903372 NXRV_040_A02_F NXRV (Nsf Xylem Root ... 40 0.29
>gb|CF665508.1|CF665508 RTCNT1_16_A06.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_16_A06_A029 5', mRNA sequence
Length = 693
Score = 192 bits (97), Expect = 3e-047
Identities = 277/337 (82%)
Strand = Plus / Plus
Query: 420 tgatgggcggtgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtga 479
||||||| |||||||| |||||||| || |||||||||||||| |||||||||||||| |
Sbjct: 40 tgatgggtggtgtttctgctgctgtctccaagactgctgctgcccccatcgagcgtgtta 99
Query: 480 agctgcttattcagaaccaagatgagatgattaagtctggtaggctatcagagccgtaca 539
|||| | ||||| |||||||| |||||| | ||||||||| | || || ||||| ||||
Sbjct: 100 agctcttgattcaaaaccaagacgagatgctcaagtctggtcgtctctctgagccctaca 159
Query: 540 agggtattgttgactgcttcaaacgtaccattaaggatgaaggtttctcttccttgtgga 599
||||||| |||||||||| ||||| ||| ||||| |||||| | || |||||||
Sbjct: 160 agggtatcaatgactgcttccaacgtgtcatcaaggaagaaggtgttgctcaattgtgga 219
Query: 600 ggggtaacactgctaatgttattcgttacttccctactcaggctttgaactttgcattta 659
| || |||||||| || || | ||||| ||||||||||| || ||||||||||| || |
Sbjct: 220 gaggaaacactgccaacgtcttgcgttatttccctactcaagccttgaactttgccttca 279
Query: 660 aggactacttcaagaggttgttcaacttcaagaaggatagggatggctattggaagtggt 719
||||||||||||||| | ||||| || || ||||| | ||| ||||| ||||||||||
Sbjct: 280 aggactacttcaagaagatgttcggctacaccaaggacaaggacggctactggaagtggt 339
Query: 720 ttgctggcaacctggcctctggtggtgctgctggtgc 756
| || || ||| |||| ||||||||||||||||||||
Sbjct: 340 tcgccggtaacttggcttctggtggtgctgctggtgc 376
>gb|CV036619.1|CV036619 RTNACL1_60_B12.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_60_B12_A029 5', mRNA sequence
Length = 743
Score = 168 bits (85), Expect = 5e-040
Identities = 269/329 (81%), Gaps = 1/329 (0%)
Strand = Plus / Plus
Query: 428 ggtgtttcagctgctgtttcaaagactgctgctgctcccatcgagcgtgtgaagctgctt 487
|||||||| |||||||| || | |||||||||||| |||||||||||||| ||||| |
Sbjct: 3 ggtgtttctgctgctgtctcca-gactgctgctgcccccatcgagcgtgttaagctcttg 61
Query: 488 attcagaaccaagatgagatgattaagtctggtaggctatcagagccgtacaagggtatt 547
||||| |||||||| |||||| | ||||||||| | || || ||||| |||||||||||
Sbjct: 62 attcaaaaccaagacgagatgctcaagtctggtcgtctctctgagccctacaagggtatc 121
Query: 548 gttgactgcttcaaacgtaccattaaggatgaaggtttctcttccttgtggaggggtaac 607
|||||||||| ||||| ||| ||||| |||||| | || |||||||| || |||
Sbjct: 122 aatgactgcttccaacgtgtcatcaaggaagaaggtgttgctcaattgtggagaggaaac 181
Query: 608 actgctaatgttattcgttacttccctactcaggctttgaactttgcatttaaggactac 667
||||| || || | ||||| ||||||||||| || ||||||||||| || |||||||||
Sbjct: 182 actgccaacgtcttgcgttatttccctactcaagccttgaactttgccttcaaggactac 241
Query: 668 ttcaagaggttgttcaacttcaagaaggatagggatggctattggaagtggtttgctggc 727
||||||| | ||||| || || ||||| | ||| ||||| ||||||||||| || ||
Sbjct: 242 ttcaagaagatgttcggctacaccaaggacaaggacggctactggaagtggttcgccggt 301
Query: 728 aacctggcctctggtggtgctgctggtgc 756
||| |||| ||||||||||||||||||||
Sbjct: 302 aacttggcttctggtggtgctgctggtgc 330
Score = 117 bits (59), Expect = 2e-024
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 1061 gctggtcttgcatcttaccccatcgataccgtccgcagaaggatgatgatgacatctggt 1120
||||||||||| ||||||||||||||||||||||||||| | ||||||||||| ||||||
Sbjct: 635 gctggtcttgcttcttaccccatcgataccgtccgcagacgtatgatgatgacttctggt 694
Query: 1121 gaggctgtcaagtacaagagctc 1143
|| || |||||||||||||||||
Sbjct: 695 gaagccgtcaagtacaagagctc 717
>gb|BQ634287.1|BQ634287 NXRV067_A07_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV067_A07 5' similar to Arabidopsis thaliana
sequence At5g13490 adenosine nucleotide translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 800
Score = 165 bits (83), Expect = 7e-039
Identities = 316/395 (80%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 310 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 369
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 370 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 429
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 430 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 489
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 490 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 549
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| |||| || ||||| || ||||||||||| |||||||||
Sbjct: 550 gataacaaggctgcaaagnnnngaggggagaggcaatttaatgggcttgttgatgtctac 609
Query: 872 cgcaagacactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgt 931
|| ||| | || ||||||| |||||||| || || ||||| || ||||| || |||
Sbjct: 610 aagaaaacattgaaaactgatggaattgctggtctctatcgtgggttcaacatttcttgt 669
Query: 932 gttggaatcattgtttatcgtggtctgtactttgg 966
|| ||||| || || ||||||||| | ||||||||
Sbjct: 670 gtgggaattatagtctatcgtggtttatactttgg 704
>gb|CF394023.1|CF394023 RTDS2_2_E04.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_2_E04_A021 5', mRNA sequence
Length = 724
Score = 165 bits (83), Expect = 7e-039
Identities = 317/395 (80%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 305 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 364
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 365 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 424
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 425 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 484
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 485 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 544
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 545 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttgttgatgtctac 604
Query: 872 cgcaagacactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgt 931
|| ||| | || ||||||| |||||||| || || ||||| || ||||| || |||
Sbjct: 605 aagaaaacattgaaaactgatggaattgctggtctctatcgtgggttcaacatttcttgt 664
Query: 932 gttggaatcattgtttatcgtggtctgtactttgg 966
|| ||||| || || ||||||||| | ||||||||
Sbjct: 665 gtgggaattatggtctatcgtggtttatactttgg 699
>gb|CO164871.1|CO164871 FLD1_50_G08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_50_G08_A029 5', mRNA sequence
Length = 839
Score = 165 bits (83), Expect = 7e-039
Identities = 317/395 (80%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 37 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 96
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 97 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 156
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 157 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 216
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 217 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 276
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 277 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttgttgatgtctac 336
Query: 872 cgcaagacactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgt 931
|| ||| | || ||||||| |||||||| || || ||||| || ||||| || |||
Sbjct: 337 aagaaaacattgaaaactgatggaattgctggtctctatcgtgggttcaacatttcttgt 396
Query: 932 gttggaatcattgtttatcgtggtctgtactttgg 966
|| ||||| || || ||||||||| | ||||||||
Sbjct: 397 gtgggaattatagtctatcgtggtttatactttgg 431
Score = 85.7 bits (43), Expect = 5e-015
Identities = 166/207 (80%)
Strand = Plus / Plus
Query: 1057 tggtgctggtcttgcatcttaccccatcgataccgtccgcagaaggatgatgatgacatc 1116
|||||||||||||||||| || || || ||||| || || ||||| ||||||||||| ||
Sbjct: 522 tggtgctggtcttgcatcgtatcctatagatactgtacgaagaagaatgatgatgacttc 581
Query: 1117 tggtgaggctgtcaagtacaagagctccttggacgcgttccagcagattcttaagaagga 1176
|||||||| || |||||||| || || ||||| || || | |||||| | | || ||
Sbjct: 582 cggtgaggcagttaagtacaaaagttcgttggatgcatttaaacagattgtccaaaatga 641
Query: 1177 agggcccaagtccctgttcaagggtgctggtgctaacattcttcgtgccattgctggtgc 1236
||| ||||||| || ||||||||||| ||||| || || || ||||| ||||| || ||
Sbjct: 642 aggtgccaagtcactcttcaagggtgcaggtgcaaatatcctccgtgctattgccggggc 701
Query: 1237 tggtgtgctttctggctatgaccagct 1263
||||||| | |||| |||||||||||
Sbjct: 702 tggtgtgttagctggatatgaccagct 728
>gb|CO167141.1|CO167141 FLD1_67_D01.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_67_D01_A029 3', mRNA sequence
Length = 872
Score = 165 bits (83), Expect = 7e-039
Identities = 317/395 (80%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 245 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 304
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 305 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 364
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 365 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 424
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 425 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 484
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 485 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttgttgatgtctac 544
Query: 872 cgcaagacactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgt 931
|| ||| | || ||||||| |||||||| || || ||||| || ||||| || |||
Sbjct: 545 aagaaaacattgaaaactgatggaattgctggtctctatcgtgggttcaacatttcttgt 604
Query: 932 gttggaatcattgtttatcgtggtctgtactttgg 966
|| ||||| || || ||||||||| | ||||||||
Sbjct: 605 gtgggaattatagtctatcgtggtttatactttgg 639
Score = 65.9 bits (33), Expect = 5e-009
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 1057 tggtgctggtcttgcatcttaccccatcgataccgtccgcagaaggatgatgatgacatc 1116
|||||||||||||||||| || || || ||||| || || ||||| ||||||||||| ||
Sbjct: 730 tggtgctggtcttgcatcgtatcctatagatactgtacgaagaagaatgatgatgacttc 789
Query: 1117 tggtgaggctgtcaagtacaa 1137
|||||||| || ||||||||
Sbjct: 790 cggtgaggcagttaagtacaa 810
>gb|DR019041.1|DR019041 STRS1_27_A10.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_27_A10_A034 5', mRNA sequence
Length = 852
Score = 165 bits (83), Expect = 7e-039
Identities = 317/395 (80%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 172 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 231
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 232 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 291
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 292 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 351
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 352 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 411
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 412 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttgttgatgtctac 471
Query: 872 cgcaagacactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgt 931
|| ||| | || ||||||| |||||||| || || ||||| || ||||| || |||
Sbjct: 472 aagaaaacattgaaaactgatggaattgctggtctctatcgtgggttcaacatttcttgt 531
Query: 932 gttggaatcattgtttatcgtggtctgtactttgg 966
|| ||||| || || ||||||||| | ||||||||
Sbjct: 532 gtgggaattatagtctatcgtggtttatactttgg 566
Score = 69.9 bits (35), Expect = 3e-010
Identities = 149/187 (79%)
Strand = Plus / Plus
Query: 1057 tggtgctggtcttgcatcttaccccatcgataccgtccgcagaaggatgatgatgacatc 1116
|||||||||||||||||| || || || ||||| || || ||||| ||||||||||| ||
Sbjct: 657 tggtgctggtcttgcatcgtatcctatagatactgtacgaagaagaatgatgatgacttc 716
Query: 1117 tggtgaggctgtcaagtacaagagctccttggacgcgttccagcagattcttaagaagga 1176
||||| || || |||||||| || || ||||| || || | |||||| | | || ||
Sbjct: 717 cggtgaagcagttaagtacaaaagttcgttggatgcatttaaacagattgtccaaaatga 776
Query: 1177 agggcccaagtccctgttcaagggtgctggtgctaacattcttcgtgccattgctggtgc 1236
||| ||||||| || ||||||||||| ||||| || || || ||||| ||||| || ||
Sbjct: 777 aggtgccaagtcactcttcaagggtgcaggtgcaaatatcctccgtgctattgccggggc 836
Query: 1237 tggtgtg 1243
|||||||
Sbjct: 837 tggtgtg 843
>gb|DR055331.1|DR055331 RTCA1_23_B04.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_23_B04_A029 3', mRNA sequence
Length = 812
Score = 165 bits (83), Expect = 7e-039
Identities = 317/395 (80%)
Strand = Plus / Minus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 729 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 670
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 669 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 610
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 609 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 550
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 549 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 490
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 489 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttgttgatgtctac 430
Query: 872 cgcaagacactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgt 931
|| ||| | || ||||||| |||||||| || || ||||| || ||||| || |||
Sbjct: 429 aagaaaacattgaaaactgatggaattgctggtctctatcgtgggttcaacatttcttgt 370
Query: 932 gttggaatcattgtttatcgtggtctgtactttgg 966
|| ||||| || || ||||||||| | ||||||||
Sbjct: 369 gtgggaattatagtctatcgtggtttatactttgg 335
Score = 77.8 bits (39), Expect = 1e-012
Identities = 165/207 (79%)
Strand = Plus / Minus
Query: 1057 tggtgctggtcttgcatcttaccccatcgataccgtccgcagaaggatgatgatgacatc 1116
|||||||||||||||||| || || || ||||| || || ||||| ||||||||||| ||
Sbjct: 244 tggtgctggtcttgcatcgtatcctatagatactgtacgaagaagaatgatgatgacttc 185
Query: 1117 tggtgaggctgtcaagtacaagagctccttggacgcgttccagcagattcttaagaagga 1176
||||| || || |||||||| || || ||||| || || | |||||| | | || ||
Sbjct: 184 cggtgaagcagttaagtacaaaagttcgttggatgcatttaaacagattgtccaaaatga 125
Query: 1177 agggcccaagtccctgttcaagggtgctggtgctaacattcttcgtgccattgctggtgc 1236
||| ||||||| || ||||||||||| ||||| || || || ||||| ||||| || ||
Sbjct: 124 aggtgccaagtcactcttcaagggtgcaggtgcaaatatcctccgtgctattgccggggc 65
Query: 1237 tggtgtgctttctggctatgaccagct 1263
||||||| | |||| |||||||||||
Sbjct: 64 tggtgtgttagctggatatgaccagct 38
>gb|DR119088.1|DR119088 RTMG1_21_C02.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_21_C02_A029 3', mRNA sequence
Length = 876
Score = 165 bits (83), Expect = 7e-039
Identities = 317/395 (80%)
Strand = Plus / Minus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 560 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 501
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 500 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 441
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 440 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 381
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 380 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 321
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 320 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttgttgatgtctac 261
Query: 872 cgcaagacactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgt 931
|| ||| | || ||||||| |||||||| || || ||||| || ||||| || |||
Sbjct: 260 aagaaaacattgaaaactgatggaattgctggtctctatcgtgggttcaacatttcttgt 201
Query: 932 gttggaatcattgtttatcgtggtctgtactttgg 966
|| ||||| || || ||||||||| | ||||||||
Sbjct: 200 gtgggaattatagtctatcgtggtttatactttgg 166
Score = 52.0 bits (26), Expect = 8e-005
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 1057 tggtgctggtcttgcatcttaccccatcgataccgtccgcagaaggatgatgatgacatc 1116
|||||||||||||||||| || || || ||||| || || ||||| ||||||||||| ||
Sbjct: 78 tggtgctggtcttgcatcgtatcctatagatactgtacgaagaagaatgatgatgacttc 19
Query: 1117 tggtga 1122
|||||
Sbjct: 18 cggtga 13
>gb|DR165853.1|DR165853 RTPHOS1_7_F02.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_7_F02_A029 5', mRNA sequence
Length = 890
Score = 165 bits (83), Expect = 7e-039
Identities = 299/371 (80%)
Strand = Plus / Plus
Query: 596 tggaggggtaacactgctaatgttattcgttacttccctactcaggctttgaactttgca 655
||||| || |||||||| |||||||| ||||| || || ||||||||||||||||||||
Sbjct: 268 tggagaggaaacactgcaaatgttatccgttattttcccactcaggctttgaactttgcg 327
Query: 656 tttaaggactacttcaagaggttgttcaacttcaagaaggatagggatggctattggaag 715
|| ||||| ||||| ||||| | || || |||||||| || |||||||| || |||||
Sbjct: 328 ttcaaggattactttaagagactctttaatttcaagaaagacagggatggttactggaaa 387
Query: 716 tggtttgctggcaacctggcctctggtggtgctgctggtgcttcctctttgttttttgtg 775
||||||||||| |||||||||||||||||||| |||||||| || ||| | |||||||
Sbjct: 388 tggtttgctggaaacctggcctctggtggtgcagctggtgcatcttctctcctttttgtt 447
Query: 776 tactccctggactacgcgagaacaaggttggctaatgatgcgaaggctgccaagggagga 835
|| || ||||||| || |||| || ||||||||||| |||||||| ||| |||
Sbjct: 448 tattctttggactatgctcgaactcggctggctaatgataacaaggctgcaaagaaggga 507
Query: 836 ggtgaaaggcagttcaatgggcttgtcgatgtctaccgcaagacactcaagtctgatggt 895
|| || ||||| || ||||||||||| ||||||||| || ||| | || |||||||
Sbjct: 508 ggggagaggcaatttaatgggcttgttgatgtctacaagaaaacattgaaaactgatgga 567
Query: 896 attgctgggctttaccgtggatttaacatctcctgtgttggaatcattgtttatcgtggt 955
|||||||| || || ||||| || ||||| || ||||| ||||| || || |||||||||
Sbjct: 568 attgctggtctctatcgtgggttcaacatttcttgtgtgggaattatagtctatcgtggt 627
Query: 956 ctgtactttgg 966
| ||||||||
Sbjct: 628 ttatactttgg 638
Score = 58.0 bits (29), Expect = 1e-006
Identities = 68/81 (83%)
Strand = Plus / Plus
Query: 1057 tggtgctggtcttgcatcttaccccatcgataccgtccgcagaaggatgatgatgacatc 1116
|||||||||||||||||| || || || ||||| || || ||||| ||||||||||| ||
Sbjct: 729 tggtgctggtcttgcatcgtatcctatagatactgtacgaagaagaatgatgatgacttc 788
Query: 1117 tggtgaggctgtcaagtacaa 1137
||||| || || ||||||||
Sbjct: 789 cggtgaagcagttaagtacaa 809
>gb|DR386244.1|DR386244 RTHG1_13_G10.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_13_G10_A029 5', mRNA sequence
Length = 793
Score = 165 bits (83), Expect = 7e-039
Identities = 317/395 (80%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 269 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 328
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 329 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 388
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 389 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 448
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 449 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 508
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 509 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttgttgatgtctac 568
Query: 872 cgcaagacactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgt 931
|| ||| | || ||||||| |||||||| || || ||||| || ||||| || |||
Sbjct: 569 aagaaaacattgaaaactgatggaattgctggtctctatcgtgggttcaacatttcttgt 628
Query: 932 gttggaatcattgtttatcgtggtctgtactttgg 966
|| ||||| || || ||||||||| | ||||||||
Sbjct: 629 gtgggaattatagtctatcgtggtttatactttgg 663
>gb|DR742100.1|DR742100 RTCU1_1_E12.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_1_E12_A029 5', mRNA sequence
Length = 750
Score = 161 bits (81), Expect = 1e-037
Identities = 263/323 (81%), Gaps = 3/323 (0%)
Strand = Plus / Plus
Query: 593 ttgtggaggggtaacactgctaatgttattcgttacttccctactcaggctttgaacttt 652
||||||||||||||||| || |||||||| ||||||||||| || ||||||||||||||
Sbjct: 18 ttgtggaggggtaacacggccaatgttatccgttacttcccgacacaggctttgaacttc 77
Query: 653 gcatttaaggactacttcaagaggttgttcaacttcaagaaggatagggatggctattgg 712
|| || ||||| ||||||||| ||||| ||||||||| || || ||||| |||
Sbjct: 78 gccttcaaggattacttcaagtccttgtttggtttcaagaagaat---gagggctactgg 134
Query: 713 aagtggtttgctggcaacctggcctctggtggtgctgctggtgcttcctctttgtttttt 772
|||||||| ||||||||| | ||||| ||||||||||||||||| || ||||| | ||
Sbjct: 135 aagtggttcgctggcaacgtcgcctccggtggtgctgctggtgcctcttctttactcttc 194
Query: 773 gtgtactccctggactacgcgagaacaaggttggctaatgatgcgaaggctgccaaggga 832
|| ||||| || |||||||| | || | | ||||| || || ||| |||| |||||
Sbjct: 195 gtctactcgcttgactacgcccgtacccgtcttgctaacgacgccaagtctgcgaagggt 254
Query: 833 ggaggtgaaaggcagttcaatgggcttgtcgatgtctaccgcaagacactcaagtctgat 892
||||| ||| | ||||||||||| || || ||||||||||||||||| |||||||||||
Sbjct: 255 ggaggagaacgccagttcaatggtctcgttgatgtctaccgcaagaccctcaagtctgac 314
Query: 893 ggtattgctgggctttaccgtgg 915
|||||||| || || ||||||||
Sbjct: 315 ggtattgccggcctctaccgtgg 337
Score = 60.0 bits (30), Expect = 3e-007
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 1182 ccaagtccctgttcaagggtgctggtgctaacattcttcgtgccattgctggtgctggtg 1241
|||| ||||| ||||||||||||||||| ||||| || |||| |||||||||||||||
Sbjct: 604 ccaaatccctcttcaagggtgctggtgccaacatcctccgtggtgttgctggtgctggtg 663
Query: 1242 tg 1243
||
Sbjct: 664 tg 665
>gb|DR742109.1|DR742109 RTCU1_1_F12.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_1_F12_A029 5', mRNA sequence
Length = 647
Score = 161 bits (81), Expect = 1e-037
Identities = 263/323 (81%), Gaps = 3/323 (0%)
Strand = Plus / Plus
Query: 593 ttgtggaggggtaacactgctaatgttattcgttacttccctactcaggctttgaacttt 652
||||||||||||||||| || |||||||| ||||||||||| || ||||||||||||||
Sbjct: 22 ttgtggaggggtaacacggccaatgttatccgttacttcccgacacaggctttgaacttc 81
Query: 653 gcatttaaggactacttcaagaggttgttcaacttcaagaaggatagggatggctattgg 712
|| || ||||| ||||||||| ||||| ||||||||| || || ||||| |||
Sbjct: 82 gccttcaaggattacttcaagtccttgtttggtttcaagaagaat---gagggctactgg 138
Query: 713 aagtggtttgctggcaacctggcctctggtggtgctgctggtgcttcctctttgtttttt 772
|||||||| ||||||||| | ||||| ||||||||||||||||| || ||||| | ||
Sbjct: 139 aagtggttcgctggcaacgtcgcctccggtggtgctgctggtgcctcttctttactcttc 198
Query: 773 gtgtactccctggactacgcgagaacaaggttggctaatgatgcgaaggctgccaaggga 832
|| ||||| || |||||||| | || | | ||||| || || ||| |||| |||||
Sbjct: 199 gtctactcgcttgactacgcccgtacccgtcttgctaacgacgccaagtctgctaagggt 258
Query: 833 ggaggtgaaaggcagttcaatgggcttgtcgatgtctaccgcaagacactcaagtctgat 892
||||| ||| | ||||||||||| || || ||||||||||||||||| |||||||||||
Sbjct: 259 ggaggagaacgccagttcaatggtctcgttgatgtctaccgcaagaccctcaagtctgac 318
Query: 893 ggtattgctgggctttaccgtgg 915
|||||||| || || ||||||||
Sbjct: 319 ggtattgccggcctctaccgtgg 341
Score = 44.1 bits (22), Expect = 0.018
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 1182 ccaagtccctgttcaagggtgctggtgctaacat 1215
|||| ||||| ||||||||||||||||| |||||
Sbjct: 608 ccaaatccctcttcaagggtgctggtgccaacat 641
>gb|DR745200.1|DR745200 RTCU1_27_E11.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_27_E11_A029 5', mRNA sequence
Length = 704
Score = 161 bits (81), Expect = 1e-037
Identities = 263/323 (81%), Gaps = 3/323 (0%)
Strand = Plus / Plus
Query: 593 ttgtggaggggtaacactgctaatgttattcgttacttccctactcaggctttgaacttt 652
||||||||||||||||| || |||||||| ||||||||||| || ||||||||||||||
Sbjct: 265 ttgtggaggggtaacacggccaatgttatccgttacttcccgacacaggctttgaacttc 324
Query: 653 gcatttaaggactacttcaagaggttgttcaacttcaagaaggatagggatggctattgg 712
|| || ||||| ||||||||| ||||| ||||||||| || || ||||| |||
Sbjct: 325 gccttcaaggattacttcaagtccttgtttggtttcaagaagaat---gagggctactgg 381
Query: 713 aagtggtttgctggcaacctggcctctggtggtgctgctggtgcttcctctttgtttttt 772
|||||||| ||||||||| | ||||| ||||||||||||||||| || ||||| | ||
Sbjct: 382 aagtggttcgctggcaacgtcgcctccggtggtgctgctggtgcctcttctttactcttc 441
Query: 773 gtgtactccctggactacgcgagaacaaggttggctaatgatgcgaaggctgccaaggga 832
|| ||||| || |||||||| | || | | ||||| || || ||| |||| |||||
Sbjct: 442 gtctactcgcttgactacgcccgtacccgtcttgctaacgacgccaagtctgcgaagggt 501
Query: 833 ggaggtgaaaggcagttcaatgggcttgtcgatgtctaccgcaagacactcaagtctgat 892
||||| ||| | ||||||||||| || || ||||||||||||||||| |||||||||||
Sbjct: 502 ggaggagaacgccagttcaatggtctcgttgatgtctaccgcaagaccctcaagtctgac 561
Query: 893 ggtattgctgggctttaccgtgg 915
|||||||| || || ||||||||
Sbjct: 562 ggtattgccggcctctaccgtgg 584
>gb|BQ634709.1|BQ634709 NXRV072_C12_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV072_C12 5' similar to Arabidopsis thaliana
sequence At5g13490 adenosine nucleotide translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 795
Score = 159 bits (80), Expect = 4e-037
Identities = 316/395 (80%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 310 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 369
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 370 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 429
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 430 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 489
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 490 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 549
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 550 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttgttgatgtctac 609
Query: 872 cgcaagacactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgt 931
|| ||| | || ||||||| |||||||| || || ||||| || ||||| || |||
Sbjct: 610 aagaaaacattgaaaactgatggaattgctggtctctatcgtgggttcaacatttcttgt 669
Query: 932 gttggaatcattgtttatcgtggtctgtactttgg 966
|| ||||| || || |||| |||| | ||||||||
Sbjct: 670 gtgggaattatagtctatcntggtttatactttgg 704
>gb|BX784188.1|BX784188 BX784188 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 130D05 similar to ADP,ATP carrier protein,
mRNA sequence
Length = 475
Score = 159 bits (80), Expect = 4e-037
Identities = 316/395 (80%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 3 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 62
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 63 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 122
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 123 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 182
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || |||| |||
Sbjct: 183 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggccaat 242
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || ||||| || ||||||||| | |||||||||
Sbjct: 243 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttattgatgtctac 302
Query: 872 cgcaagacactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgt 931
|| ||| | || |||||||| |||||||| || || ||||| || ||||| || |||
Sbjct: 303 nagaaaacattgaaatctgatggaattgctggtctctatcgtgggttcaacatttcttgt 362
Query: 932 gttggaatcattgtttatcgtggtctgtactttgg 966
|| ||||| || || ||||||||| | ||||||||
Sbjct: 363 gtgggaattatagtctatcgtggtttatactttgg 397
>gb|DR072361.1|DR072361 RTDK1_25_F11.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_25_F11_A029 5', mRNA sequence
Length = 666
Score = 159 bits (80), Expect = 4e-037
Identities = 308/384 (80%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 102 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 161
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 162 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 221
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 222 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 281
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 282 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 341
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 342 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttgttgatgtctac 401
Query: 872 cgcaagacactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgt 931
|| ||| | || ||||||| |||||||| || || ||||| || ||||| || |||
Sbjct: 402 aagaaaacattgaaaactgatggaattgctggtctctatcgtgggttcaacatttcttgt 461
Query: 932 gttggaatcattgtttatcgtggt 955
|| ||||| || || |||||||||
Sbjct: 462 gtgggaattatagtctatcgtggt 485
Score = 63.9 bits (32), Expect = 2e-008
Identities = 68/80 (85%)
Strand = Plus / Plus
Query: 1057 tggtgctggtcttgcatcttaccccatcgataccgtccgcagaaggatgatgatgacatc 1116
|||||||||||||||||| || || || ||||| || || ||||| ||||||||||| ||
Sbjct: 587 tggtgctggtcttgcatcgtatcctatagatactgtacgaagaagaatgatgatgacttc 646
Query: 1117 tggtgaggctgtcaagtaca 1136
|||||||| || |||||||
Sbjct: 647 cggtgaggcagttaagtaca 666
>gb|CF663717.1|CF663717 RTCNT1_4_E08.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_4_E08_A029 5', mRNA sequence
Length = 784
Score = 157 bits (79), Expect = 2e-036
Identities = 316/395 (80%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 355 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 414
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 415 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 474
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 475 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 534
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 535 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 594
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || ||||| || ||||||||| | |||||||||
Sbjct: 595 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttattgatgtctac 654
Query: 872 cgcaagacactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgt 931
|| ||| | || ||||||| |||||||| || || ||||| || ||||| || |||
Sbjct: 655 aagaaaacattgaaaactgatggaattgctggtctctatcgtgggttcaacatttcttgt 714
Query: 932 gttggaatcattgtttatcgtggtctgtactttgg 966
|| ||||| || || ||||||||| | ||||||||
Sbjct: 715 gtgggaattatagtctatcgtggtttatactttgg 749
>gb|DR050316.1|DR050316 RTBOR1_22_D10.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_22_D10_A029 5', mRNA sequence
Length = 790
Score = 157 bits (79), Expect = 2e-036
Identities = 316/395 (80%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 75 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 134
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 135 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 194
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 195 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 254
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 255 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 314
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || ||||| || ||||||||| | |||||||||
Sbjct: 315 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttattgatgtctac 374
Query: 872 cgcaagacactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgt 931
|| ||| | || ||||||| |||||||| || || ||||| || ||||| || |||
Sbjct: 375 aagaaaacattgaaaactgatggaattgctggtctctatcgtgggttcaacatttcttgt 434
Query: 932 gttggaatcattgtttatcgtggtctgtactttgg 966
|| ||||| || || ||||||||| | ||||||||
Sbjct: 435 gtgggaattatagtctatcgtggtttatactttgg 469
Score = 85.7 bits (43), Expect = 5e-015
Identities = 166/207 (80%)
Strand = Plus / Plus
Query: 1057 tggtgctggtcttgcatcttaccccatcgataccgtccgcagaaggatgatgatgacatc 1116
|||||||||||||||||| || || || ||||| || || ||||| ||||||||||| ||
Sbjct: 560 tggtgctggtcttgcatcgtatcctatagatactgtacgaagaagaatgatgatgacttc 619
Query: 1117 tggtgaggctgtcaagtacaagagctccttggacgcgttccagcagattcttaagaagga 1176
|||||||| || |||||||| || || ||||| || || | |||||| | | || ||
Sbjct: 620 cggtgaggcagttaagtacaaaagttcgttggatgcatttaaacagattgtccaaaatga 679
Query: 1177 agggcccaagtccctgttcaagggtgctggtgctaacattcttcgtgccattgctggtgc 1236
||| ||||||| || ||||||||||| ||||| || || || ||||| ||||| || ||
Sbjct: 680 aggttccaagtcactcttcaagggtgcaggtgcaaatatcctccgtgctattgccggggc 739
Query: 1237 tggtgtgctttctggctatgaccagct 1263
||||||| | |||| |||||||||||
Sbjct: 740 tggtgtgttagctggatatgaccagct 766
>gb|DR117547.1|DR117547 RTMG1_7_D06.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_7_D06_A029 5', mRNA sequence
Length = 837
Score = 157 bits (79), Expect = 2e-036
Identities = 316/395 (80%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 286 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 345
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 346 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 405
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 406 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 465
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 466 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 525
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || ||||| || ||||||||| | |||||||||
Sbjct: 526 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttattgatgtctac 585
Query: 872 cgcaagacactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgt 931
|| ||| | || ||||||| |||||||| || || ||||| || ||||| || |||
Sbjct: 586 aagaaaacattgaaaactgatggaattgctggtctctatcgtgggttcaacatttcttgt 645
Query: 932 gttggaatcattgtttatcgtggtctgtactttgg 966
|| ||||| || || ||||||||| | ||||||||
Sbjct: 646 gtgggaattatagtctatcgtggtttatactttgg 680
Score = 54.0 bits (27), Expect = 2e-005
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 1057 tggtgctggtcttgcatcttaccccatcgataccgtccgcagaaggatgatgatgacatc 1116
|||||||||||||||||| || || || ||||| || || ||||| ||||||||||| ||
Sbjct: 771 tggtgctggtcttgcatcgtatcctatagatactgtacgaagaagaatgatgatgacttc 830
Query: 1117 tggtgag 1123
||||||
Sbjct: 831 cggtgag 837
>gb|DR385595.1|DR385595 RTHG1_9_D06.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_9_D06_A029 5', mRNA sequence
Length = 731
Score = 157 bits (79), Expect = 2e-036
Identities = 316/395 (80%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 182 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 241
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 242 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 301
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 302 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 361
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 362 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 421
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || ||||| || ||||||||| | |||||||||
Sbjct: 422 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttattgatgtctac 481
Query: 872 cgcaagacactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgt 931
|| ||| | || ||||||| |||||||| || || ||||| || ||||| || |||
Sbjct: 482 aagaaaacattgaaaactgatggaattgctggtctctatcgtgggttcaacatttcttgt 541
Query: 932 gttggaatcattgtttatcgtggtctgtactttgg 966
|| ||||| || || ||||||||| | ||||||||
Sbjct: 542 gtgggaattatagtctatcgtggtttatactttgg 576
Score = 50.1 bits (25), Expect = 3e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1057 tggtgctggtcttgcatcttaccccatcgataccgtccgcagaaggatgatgatgac 1113
|||||||||||||||||| || || || ||||| || || ||||| |||||||||||
Sbjct: 667 tggtgctggtcttgcatcgtatcctatagatactgtacgaagaagaatgatgatgac 723
>gb|BF610148.1|BF610148 NXSI_055_C08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_055_C08 5' similar to Arabidopsis thaliana
sequence At4g28390 ADP,ATP carrier-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 526
Score = 155 bits (78), Expect = 7e-036
Identities = 288/358 (80%)
Strand = Plus / Plus
Query: 596 tggaggggtaacactgctaatgttattcgttacttccctactcaggctttgaactttgca 655
||||| || |||||||| |||||||| ||||| || || ||||||||||||||||||||
Sbjct: 2 tggagaggaaacactgcaaatgttatccgttattttcccactcaggctttgaactttgcg 61
Query: 656 tttaaggactacttcaagaggttgttcaacttcaagaaggatagggatggctattggaag 715
|| ||||| ||||| ||||| | || || |||||||| || |||||||| || |||||
Sbjct: 62 ttcaaggattactttaagagactctttaatttcaagaaagacagggatggttactggaaa 121
Query: 716 tggtttgctggcaacctggcctctggtggtgctgctggtgcttcctctttgttttttgtg 775
||||||||||| |||||||||||||||||||| |||||||| || ||| | |||||||
Sbjct: 122 tggtttgctggaaacctggcctctggtggtgcagctggtgcatcttctctcctttttgtt 181
Query: 776 tactccctggactacgcgagaacaaggttggctaatgatgcgaaggctgccaagggagga 835
|| || ||||||| || |||| || ||||||||||| |||||||| ||| |||
Sbjct: 182 tattctttggactatgctcgaactcggctggctaatgataacaaggctgcaaagaaggga 241
Query: 836 ggtgaaaggcagttcaatgggcttgtcgatgtctaccgcaagacactcaagtctgatggt 895
|| || ||||| || ||||||||||| ||||||||| || ||| | || |||||||
Sbjct: 242 ggggagaggcaatttaatgggcttgttgatgtctacaagaaaacattgaaaactgatgga 301
Query: 896 attgctgggctttaccgtggatttaacatctcctgtgttggaatcattgtttatcgtg 953
|||||||| || || ||||| || ||||| || ||||| ||||| || || |||||||
Sbjct: 302 attgctggtctctatcgtgggttcaacatttcttgtgtgggaattatagtctatcgtg 359
Score = 50.1 bits (25), Expect = 3e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1057 tggtgctggtcttgcatcttaccccatcgataccgtccgcagaaggatgatgatgac 1113
|||||||||||||||||| || || || ||||| || || ||||| |||||||||||
Sbjct: 463 tggtgctggtcttgcatcgtatcctatagatactgtacgaagaagaatgatgatgac 519
>gb|DR081289.1|DR081289 RTFEPL1_28_D04.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_28_D04_A029 5', mRNA sequence
Length = 674
Score = 153 bits (77), Expect = 3e-035
Identities = 284/353 (80%)
Strand = Plus / Plus
Query: 614 aatgttattcgttacttccctactcaggctttgaactttgcatttaaggactacttcaag 673
|||||||| ||||| || || |||||||||||||||||||| || ||||| ||||| |||
Sbjct: 4 aatgttatccgttattttcccactcaggctttgaactttgcgttcaaggattactttaag 63
Query: 674 aggttgttcaacttcaagaaggatagggatggctattggaagtggtttgctggcaacctg 733
|| | || || |||||||| || |||||||| || ||||| ||||||||||| ||||||
Sbjct: 64 agactctttaatttcaagaaagacagggatggttactggaaatggtttgctggaaacctg 123
Query: 734 gcctctggtggtgctgctggtgcttcctctttgttttttgtgtactccctggactacgcg 793
|||||||||||||| |||||||| || ||| | ||||||| || || ||||||| ||
Sbjct: 124 gcctctggtggtgcagctggtgcatcttctctcctttttgtttattctttggactatgct 183
Query: 794 agaacaaggttggctaatgatgcgaaggctgccaagggaggaggtgaaaggcagttcaat 853
|||| || ||||||||||| |||||||| ||| ||||| || ||||| || |||
Sbjct: 184 cgaactcggctggctaatgataacaaggctgcaaagaagggaggggagaggcaatttaat 243
Query: 854 gggcttgtcgatgtctaccgcaagacactcaagtctgatggtattgctgggctttaccgt 913
|||||||| ||||||||| || ||| | || ||||||| |||||||| || || |||
Sbjct: 244 gggcttgttgatgtctacaagaaaacattgaaaactgatggaattgctggtctctatcgt 303
Query: 914 ggatttaacatctcctgtgttggaatcattgtttatcgtggtctgtactttgg 966
|| || ||||| || ||||| ||||| || || ||||||||| | ||||||||
Sbjct: 304 gggttcaacatttcttgtgtgggaattatagtctatcgtggtttatactttgg 356
Score = 77.8 bits (39), Expect = 1e-012
Identities = 165/207 (79%)
Strand = Plus / Plus
Query: 1057 tggtgctggtcttgcatcttaccccatcgataccgtccgcagaaggatgatgatgacatc 1116
|||||||||||||||||| || || || ||||| || || ||||| ||||||||||| ||
Sbjct: 447 tggtgctggtcttgcatcgtatcctatagatactgtacgaagaagaatgatgatgacttc 506
Query: 1117 tggtgaggctgtcaagtacaagagctccttggacgcgttccagcagattcttaagaagga 1176
||||| || || |||||||| || || ||||| || || | |||||| | | || ||
Sbjct: 507 cggtgaagcagttaagtacaaaagttcgttggatgcatttaaacagattgtccaaaatga 566
Query: 1177 agggcccaagtccctgttcaagggtgctggtgctaacattcttcgtgccattgctggtgc 1236
||| ||||||| || ||||||||||| ||||| || || || ||||| ||||| || ||
Sbjct: 567 aggtgccaagtcactcttcaagggtgcaggtgcaaatatcctccgtgctattgccggggc 626
Query: 1237 tggtgtgctttctggctatgaccagct 1263
||||||| | |||| |||||||||||
Sbjct: 627 tggtgtgttagctggatatgaccagct 653
>gb|BQ634705.1|BQ634705 NXRV072_C08_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV072_C08 5' similar to Arabidopsis thaliana
sequence At3g08580 adenylate translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 731
Score = 151 bits (76), Expect = 1e-034
Identities = 244/300 (81%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 312 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 371
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 372 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 431
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 432 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 491
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 492 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 551
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 552 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttgttgatgtctac 611
>gb|CF474863.1|CF474863 RTWW2_8_E08.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_8_E08_A021 5', mRNA sequence
Length = 723
Score = 151 bits (76), Expect = 1e-034
Identities = 244/300 (81%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 366 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 425
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 426 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 485
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 486 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 545
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 546 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 605
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 606 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttgttgatgtctac 665
>gb|CO163260.1|CO163260 FLD1_40_B01.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_40_B01_A029 5', mRNA sequence
Length = 810
Score = 151 bits (76), Expect = 1e-034
Identities = 244/300 (81%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 440 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 499
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 500 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 559
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 560 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 619
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 620 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 679
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 680 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttgttgatgtctac 739
>gb|CO414444.1|CO414444 EST844829 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIAMO40 5' end, mRNA sequence
Length = 881
Score = 151 bits (76), Expect = 1e-034
Identities = 245/300 (81%), Gaps = 1/300 (0%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 578 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 637
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 638 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 697
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 698 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 757
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 758 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 817
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| ||||||| ||| | |||||| || ||||| || ||||||||||| |||||||||
Sbjct: 818 gataacaaggctg-caaagaaggaggggagaggcaatttaatgggcttgttgatgtctac 876
>gb|DN451745.1|DN451745 EST947544 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIF743 5' end, mRNA sequence
Length = 950
Score = 151 bits (76), Expect = 1e-034
Identities = 244/300 (81%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 575 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 634
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 635 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 694
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 695 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 754
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 755 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 814
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 815 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttgttgatgtctac 874
>gb|DN457387.1|DN457387 EST953186 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGZ32 5' end, mRNA sequence
Length = 925
Score = 151 bits (76), Expect = 1e-034
Identities = 244/300 (81%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 575 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 634
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 635 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 694
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 695 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 754
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 755 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 814
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 815 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttgttgatgtctac 874
>gb|DN460975.1|DN460975 EST956774 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPII480 5' end, mRNA sequence
Length = 926
Score = 151 bits (76), Expect = 1e-034
Identities = 244/300 (81%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 585 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 644
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 645 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 704
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 705 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 764
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 765 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 824
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 825 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttgttgatgtctac 884
>gb|DN465628.1|DN465628 EST961427 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIJS53 5' end, mRNA sequence
Length = 947
Score = 151 bits (76), Expect = 1e-034
Identities = 244/300 (81%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 585 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 644
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 645 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 704
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 705 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 764
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 765 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 824
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 825 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttgttgatgtctac 884
>gb|DT625022.1|DT625022 EST1159297 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAL08 5' end, mRNA sequence
Length = 950
Score = 151 bits (76), Expect = 1e-034
Identities = 244/300 (81%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 575 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 634
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 635 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 694
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 695 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 754
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 755 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 814
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 815 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttgttgatgtctac 874
>gb|DT627448.1|DT627448 EST1160524 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAY69 5' end, mRNA sequence
Length = 920
Score = 151 bits (76), Expect = 1e-034
Identities = 244/300 (81%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 585 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 644
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 645 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 704
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 705 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 764
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 765 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 824
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 825 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttgttgatgtctac 884
>gb|BQ634195.1|BQ634195 NXRV064_H09_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV064_H09 5' similar to Arabidopsis thaliana
sequence At5g13490 adenosine nucleotide translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 750
Score = 149 bits (75), Expect = 4e-034
Identities = 314/396 (79%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 310 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 369
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 370 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 429
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 430 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 489
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 490 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 549
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| | || ||||| || ||||||||||| |||||||||
Sbjct: 550 gataacaaggctgcaaagnnnngnnnggagaggcaatttaatgggcttgttgatgtctac 609
Query: 872 cgcaagacactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgt 931
|| ||| | || ||||||| |||||||| || || ||||| || ||||| || |||
Sbjct: 610 aagaaaacattgaaaactgatggaattgctggtctctatcgtgggttcaacatttcttgt 669
Query: 932 gttggaatcattgtttatcgtggtctgtactttggg 967
|| ||||| || || ||||||||| | |||||||||
Sbjct: 670 gtgggaattatagtctatcgtggtttatactttggg 705
>gb|BQ634579.1|BQ634579 NXRV070_F11_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV070_F11 5' similar to Arabidopsis thaliana
sequence At5g13490 adenosine nucleotide translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 717
Score = 149 bits (75), Expect = 4e-034
Identities = 243/300 (81%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 310 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 369
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 370 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 429
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 430 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 489
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 490 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 549
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| |||| || ||||| || ||||||||||| |||||||||
Sbjct: 550 gataacaaggctgcaaagannngaggggagaggcaatttaatgggcttgttgatgtctac 609
>gb|CF396995.1|CF396995 RTDS2_25_B08.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_25_B08_A021 5', mRNA sequence
Length = 565
Score = 149 bits (75), Expect = 4e-034
Identities = 243/299 (81%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 267 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 326
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 327 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 386
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 387 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 446
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| | ||||||||
Sbjct: 447 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactccgctggctaat 506
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtcta 870
||| |||||||| ||| |||||| || ||||| || ||||||||||| ||||||||
Sbjct: 507 gataacaaggctgcaaagaaaggaggggagaggcaatttaatgggcttgttgatgtcta 565
>gb|CO367254.1|CO367254 RTK1_33_E04.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_33_E04_A029 3', mRNA sequence
Length = 878
Score = 149 bits (75), Expect = 4e-034
Identities = 316/395 (80%), Gaps = 1/395 (0%)
Strand = Plus / Minus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 409 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 350
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 349 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 290
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 289 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 230
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 229 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 170
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || ||||| || ||||||||| | |||||||||
Sbjct: 169 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttattgatgtctac 110
Query: 872 cgcaagacactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgt 931
|| ||| | || ||||||| |||||||| || || ||||| || ||||| || |||
Sbjct: 109 aagaaaacattgaaaactgatggaattgctggtctctatcgtgggttcaacatttcttgt 50
Query: 932 gttggaatcattgtttatcgtggtctgtactttgg 966
|| ||||| || || ||||||||| | ||||||||
Sbjct: 49 gtgggaat-atagtctatcgtggtttatactttgg 16
>gb|DN457452.1|DN457452 EST953251 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIH004 5' end, mRNA sequence
Length = 902
Score = 149 bits (75), Expect = 4e-034
Identities = 243/299 (81%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 604 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 663
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 664 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 723
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 724 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 783
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 784 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 843
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtcta 870
||| |||||||| ||| ||||| || ||||| || ||||||||||| ||||||||
Sbjct: 844 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttgttgatgtcta 902
>gb|AI812944.1|AI812944 22G12 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 580
Score = 147 bits (74), Expect = 2e-033
Identities = 281/350 (80%)
Strand = Plus / Plus
Query: 617 gttattcgttacttccctactcaggctttgaactttgcatttaaggactacttcaagagg 676
||||| ||||| || || |||||||||||||||||||| || ||||| ||||| |||||
Sbjct: 1 gttatccgttattttcccactcaggctttgaactttgcgttcaaggattactttaagaga 60
Query: 677 ttgttcaacttcaagaaggatagggatggctattggaagtggtttgctggcaacctggcc 736
| || || |||||||| || |||||||| || ||||| ||||||||||| |||||||||
Sbjct: 61 ctctttaatttcaagaaagacagggatggttactggaaatggtttgctggaaacctggcc 120
Query: 737 tctggtggtgctgctggtgcttcctctttgttttttgtgtactccctggactacgcgaga 796
||||||||||| |||||||| || ||| | ||||||| || || ||||||| || ||
Sbjct: 121 tctggtggtgcagctggtgcatcttctctcctttttgtttattctttggactatgctcga 180
Query: 797 acaaggttggctaatgatgcgaaggctgccaagggaggaggtgaaaggcagttcaatggg 856
|| || ||||||||||| |||||||| ||| ||||| || ||||| || ||||||
Sbjct: 181 actcggctggctaatgataacaaggctgcaaagaagggaggggagaggcaatttaatggg 240
Query: 857 cttgtcgatgtctaccgcaagacactcaagtctgatggtattgctgggctttaccgtgga 916
||||| ||||||||| || ||| | || ||||||| |||||||| || || |||||
Sbjct: 241 cttgttgatgtctacaagaaaacattgaaaactgatggaattgctggtctctatcgtggg 300
Query: 917 tttaacatctcctgtgttggaatcattgtttatcgtggtctgtactttgg 966
|| ||||| || ||||| ||||| || || ||||||||| | ||||||||
Sbjct: 301 ttcaacatttcttgtgtgggaattatagtctatcgtggtttatactttgg 350
Score = 65.9 bits (33), Expect = 5e-009
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 1057 tggtgctggtcttgcatcttaccccatcgataccgtccgcagaaggatgatgatgacatc 1116
|||||||||||||||||| || || || ||||| || || ||||| ||||||||||| ||
Sbjct: 441 tggtgctggtcttgcatcgtatcctatagatactgtacgaagaagaatgatgatgacttc 500
Query: 1117 tggtgaggctgtcaagtacaa 1137
|||||||| || ||||||||
Sbjct: 501 cggtgaggcagttaagtacaa 521
>gb|DR387015.1|DR387015 RTHG1_18_G07.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_18_G07_A029 5', mRNA sequence
Length = 756
Score = 147 bits (74), Expect = 2e-033
Identities = 287/358 (80%)
Strand = Plus / Plus
Query: 609 ctgctaatgttattcgttacttccctactcaggctttgaactttgcatttaaggactact 668
|||| |||||||| ||||| || || |||||||||||||||||||| || ||||| ||||
Sbjct: 13 ctgcaaatgttatccgttattttcccactcaggctttgaactttgcgttcaaggattact 72
Query: 669 tcaagaggttgttcaacttcaagaaggatagggatggctattggaagtggtttgctggca 728
| ||||| | || || |||||||| || |||||||| || ||||| ||||||||||| |
Sbjct: 73 ttaagagactctttaatttcaagaaagacagggatggttactggaaatggtttgctggaa 132
Query: 729 acctggcctctggtggtgctgctggtgcttcctctttgttttttgtgtactccctggact 788
||||||||||||||||||| |||||||| || ||| | ||||||| || || ||||||
Sbjct: 133 acctggcctctggtggtgcagctggtgcatcttctctcctttttgtttattctttggact 192
Query: 789 acgcgagaacaaggttggctaatgatgcgaaggctgccaagggaggaggtgaaaggcagt 848
| || |||| || ||||||||||| |||||||| ||| ||||| || ||||| |
Sbjct: 193 atgctcgaactcggctggctaatgataacaaggctgcaaagaagggaggggagaggcaat 252
Query: 849 tcaatgggcttgtcgatgtctaccgcaagacactcaagtctgatggtattgctgggcttt 908
| ||||||||| | ||||||||| || ||| | || ||||||| |||||||| || |
Sbjct: 253 ttaatgggcttattgatgtctacaagaaaacattgaaaactgatggaattgctggtctct 312
Query: 909 accgtggatttaacatctcctgtgttggaatcattgtttatcgtggtctgtactttgg 966
| ||||| || ||||| || ||||| ||||| || || ||||||||| | ||||||||
Sbjct: 313 atcgtgggttcaacatttcttgtgtgggaattatagtctatcgtggtttatactttgg 370
Score = 85.7 bits (43), Expect = 5e-015
Identities = 166/207 (80%)
Strand = Plus / Plus
Query: 1057 tggtgctggtcttgcatcttaccccatcgataccgtccgcagaaggatgatgatgacatc 1116
|||||||||||||||||| || || || ||||| || || ||||| ||||||||||| ||
Sbjct: 461 tggtgctggtcttgcatcgtatcctatagatactgtacgaagaagaatgatgatgacttc 520
Query: 1117 tggtgaggctgtcaagtacaagagctccttggacgcgttccagcagattcttaagaagga 1176
|||||||| || |||||||| || || ||||| || || | |||||| | | || ||
Sbjct: 521 cggtgaggcagttaagtacaaaagttcgttggatgcatttaaacagattgtccaaaatga 580
Query: 1177 agggcccaagtccctgttcaagggtgctggtgctaacattcttcgtgccattgctggtgc 1236
||| ||||||| || ||||||||||| ||||| || || || ||||| ||||| || ||
Sbjct: 581 aggttccaagtcactcttcaagggtgcaggtgcaaatatcctccgtgctattgccggggc 640
Query: 1237 tggtgtgctttctggctatgaccagct 1263
||||||| | |||| |||||||||||
Sbjct: 641 tggtgtgttagctggatatgaccagct 667
>gb|BF169906.1|BF169906 NXCI_127_H07_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_127_H07 5' similar to Arabidopsis
thaliana sequence At4g28390 ADP,ATP carrier-like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 370
Score = 145 bits (73), Expect = 7e-033
Identities = 243/300 (81%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 1 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 60
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 61 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 120
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 121 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 180
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 181 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 240
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| ||||| || || || || ||||||||||| |||||||||
Sbjct: 241 gataacaaggctgcaaagaagggaggggagagncaatttaatgggcttgttgatgtctac 300
>gb|BQ634283.1|BQ634283 NXRV067_A03_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV067_A03 5' similar to Arabidopsis thaliana
sequence At5g13490 adenosine nucleotide translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 717
Score = 145 bits (73), Expect = 7e-033
Identities = 242/300 (80%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 310 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 369
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 370 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 429
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 430 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 489
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 490 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 549
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| | || || ||||| || ||||||||||| |||||||||
Sbjct: 550 gataacaaggctgcaaagnnnngnggggagaggcaatttaatgggcttgttgatgtctac 609
>gb|BQ634601.1|BQ634601 NXRV070_H12_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV070_H12 5' similar to Arabidopsis thaliana
sequence At5g13490 adenosine nucleotide translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 699
Score = 145 bits (73), Expect = 7e-033
Identities = 242/300 (80%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 310 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 369
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 370 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 429
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 430 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 489
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 490 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 549
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| ||| | || || ||||| || ||||||||||| |||||||||
Sbjct: 550 gataacaaggctgcaaagnnnngnggggagaggcaatttaatgggcttgttgatgtctac 609
>gb|DN458978.1|DN458978 EST954777 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIHH89 5' end, mRNA sequence
Length = 906
Score = 143 bits (72), Expect = 3e-032
Identities = 243/300 (81%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 605 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 664
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 665 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 724
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 725 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 784
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 785 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 844
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| || ||||| ||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 845 gataacaacgctgcaaagaagggaggggagaggcaatttaatgggcttgttgatgtctac 904
>gb|DR015317.1|DR015317 STRS1_2_F07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_2_F07_A034 5', mRNA sequence
Length = 900
Score = 143 bits (72), Expect = 3e-032
Identities = 267/332 (80%)
Strand = Plus / Minus
Query: 635 actcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaagaag 694
|||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||||
Sbjct: 894 actcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaagaaa 835
Query: 695 gatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgctggt 754
|| |||||||| || ||||| ||||||||||| |||||||||||||||||||| ||||||
Sbjct: 834 gacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagctggt 775
Query: 755 gcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaatgat 814
|| || ||| | ||||||| || || ||||||| || |||| || |||||||||||
Sbjct: 774 gcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaatgat 715
Query: 815 gcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctaccgc 874
|||||||| ||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 714 aacaaggctgcaaagaagggaggggagaggcaatttaatgggcttgttgatgtctacaag 655
Query: 875 aagacactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgtgtt 934
|| ||| | || ||||||| |||||||| || || ||||| || ||||| || |||||
Sbjct: 654 aaaacattgaaaactgatggaattgctggtctctatcgtgggttcaacatttcttgtgtg 595
Query: 935 ggaatcattgtttatcgtggtctgtactttgg 966
||||| || || ||||||||| | ||||||||
Sbjct: 594 ggaattatagtctatcgtggtttatactttgg 563
Score = 85.7 bits (43), Expect = 5e-015
Identities = 166/207 (80%)
Strand = Plus / Minus
Query: 1057 tggtgctggtcttgcatcttaccccatcgataccgtccgcagaaggatgatgatgacatc 1116
|||||||||||||||||| || || || ||||| || || ||||| ||||||||||| ||
Sbjct: 472 tggtgctggtcttgcatcgtatcctatagatactgtacgaagaagaatgatgatgacttc 413
Query: 1117 tggtgaggctgtcaagtacaagagctccttggacgcgttccagcagattcttaagaagga 1176
|||||||| || |||||||| || || ||||| || || | |||||| | | || ||
Sbjct: 412 cggtgaggcagttaagtacaaaagttcgttggatgcatttaaacagattgtccaaaatga 353
Query: 1177 agggcccaagtccctgttcaagggtgctggtgctaacattcttcgtgccattgctggtgc 1236
||| ||||||| || ||||||||||| ||||| || || || ||||| ||||| || ||
Sbjct: 352 aggtgccaagtcactcttcaagggtgcaggtgcaaatatcctccgtgctattgccggggc 293
Query: 1237 tggtgtgctttctggctatgaccagct 1263
||||||| | |||| |||||||||||
Sbjct: 292 tggtgtgttagctggatatgaccagct 266
>gb|BQ633798.1|BQ633798 NXRV060_H04_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV060_H04 5' similar to Arabidopsis thaliana
sequence At5g13490 adenosine nucleotide translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 699
Score = 141 bits (71), Expect = 1e-031
Identities = 242/300 (80%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 310 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 369
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 370 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 429
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 430 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 489
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 490 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 549
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctac 871
||| |||||||| || || || || ||||| || ||||||||||| |||||||||
Sbjct: 550 gataacaaggctgcnnagaagggnggggagaggcaatttaatgggcttgttgatgtctac 609
>gb|CF395120.1|CF395120 RTDS2_9_A02.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_9_A02_A021 5', mRNA sequence
Length = 534
Score = 141 bits (71), Expect = 1e-031
Identities = 288/359 (80%), Gaps = 1/359 (0%)
Strand = Plus / Plus
Query: 609 ctgctaatgttattcgttacttccctactcaggctttgaactttgcatttaaggactact 668
|||| |||||||| ||||| || || |||||||||||||||||||| || ||||| ||||
Sbjct: 18 ctgcaaatgttatccgttattttcccactcaggctttgaactttgcgttcaaggattact 77
Query: 669 tcaagaggttgttcaacttcaagaaggatagggatggctattggaagtggtttgctggca 728
| ||||| | || || |||||||| || |||||||| || ||||| ||||||||||| |
Sbjct: 78 ttaagagactctttaatttcaagaaagacagggatggttactggaaatggtttgctggaa 137
Query: 729 acctggcctctggtggtgctgctggtgcttcctctttgttttttgtgtactccctggact 788
||||||||||||||||||| |||||||| || ||| | ||||||| || || ||||||
Sbjct: 138 acctggcctctggtggtgcagctggtgcatcttctctcctttttgtttattctttggact 197
Query: 789 acgcgagaacaaggttggctaatgatgcgaaggctgccaagggaggaggtgaaaggcagt 848
| || |||| || ||||||||||| |||||||| ||| ||||| || ||||| |
Sbjct: 198 atgctcgaactcggctggctaatgataacaaggctgcaaagaagggaggggagaggcaat 257
Query: 849 tcaatggg-cttgtcgatgtctaccgcaagacactcaagtctgatggtattgctgggctt 907
| |||||| ||||| ||||||||| || ||| | || ||||||| |||||||| ||
Sbjct: 258 ttaatgggncttgttgatgtctacaagaaaacattgaaaactgatggaattgctggtctc 317
Query: 908 taccgtggatttaacatctcctgtgttggaatcattgtttatcgtggtctgtactttgg 966
|| ||||| || ||||| || ||||| ||||| || || ||||||||| | ||||||||
Sbjct: 318 tatcgtgggttcaacatttcttgtgtgggaattatagtctatcgtggtttatactttgg 376
Score = 52.0 bits (26), Expect = 8e-005
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 1057 tggtgctggtcttgcatcttaccccatcgataccgtccgcagaaggatgatgatgacatc 1116
|||||||||||||||||| || || || ||||| || || ||||| ||||||||||| ||
Sbjct: 467 tggtgctggtcttgcatcgtatcctatagatactgtacgaagaagaatgatgatgacttc 526
Query: 1117 tggtga 1122
|||||
Sbjct: 527 cggtga 532
>gb|CO162784.1|CO162784 FLD1_37_B04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_37_B04_A029 5', mRNA sequence
Length = 878
Score = 141 bits (71), Expect = 1e-031
Identities = 266/331 (80%)
Strand = Plus / Plus
Query: 636 ctcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaagaagg 695
||||||||||||||||||| || ||||| ||||| ||||| | || || |||||||| |
Sbjct: 14 ctcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaagaaag 73
Query: 696 atagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgctggtg 755
| |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 74 acagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagctggtg 133
Query: 756 cttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaatgatg 815
| || ||| | ||||||| || || ||||||| || |||| || |||||||||||
Sbjct: 134 catcttctctcctttttgtttattctttggactatgctcgaactcggctggctaatgata 193
Query: 816 cgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgtcgatgtctaccgca 875
|||||||| ||| ||||| || ||||| || ||||||||||| ||||||||| |
Sbjct: 194 acaaggctgcaaagaagggaggggagaggcaatttaatgggcttgttgatgtctacaaga 253
Query: 876 agacactcaagtctgatggtattgctgggctttaccgtggatttaacatctcctgtgttg 935
| ||| | || ||||||| |||||||| || || ||||| || ||||| || ||||| |
Sbjct: 254 aaacattgaaaactgatggaattgctggtctctatcgtgggttcaacatttcttgtgtgg 313
Query: 936 gaatcattgtttatcgtggtctgtactttgg 966
|||| || || ||||||||| | ||||||||
Sbjct: 314 gaattatagtctatcgtggtttatactttgg 344
Score = 77.8 bits (39), Expect = 1e-012
Identities = 165/207 (79%)
Strand = Plus / Plus
Query: 1057 tggtgctggtcttgcatcttaccccatcgataccgtccgcagaaggatgatgatgacatc 1116
|||||||||||||||||| || || || ||||| || || ||||| ||||||||||| ||
Sbjct: 435 tggtgctggtcttgcatcgtatcctatagatactgtacgaagaagaatgatgatgacttc 494
Query: 1117 tggtgaggctgtcaagtacaagagctccttggacgcgttccagcagattcttaagaagga 1176
||||| || || |||||||| || || ||||| || || | |||||| | | || ||
Sbjct: 495 cggtgaagcagttaagtacaaaagttcgttggatgcatttaaacagattgtccaaaatga 554
Query: 1177 agggcccaagtccctgttcaagggtgctggtgctaacattcttcgtgccattgctggtgc 1236
||| ||||||| || ||||||||||| ||||| || || || ||||| ||||| || ||
Sbjct: 555 aggtgccaagtcactcttcaagggtgcaggtgcaaatatcctccgtgctattgccggggc 614
Query: 1237 tggtgtgctttctggctatgaccagct 1263
||||||| | |||| |||||||||||
Sbjct: 615 tggtgtgttagctggatatgaccagct 641
>gb|DN456821.1|DN456821 EST952620 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIGT18 5' end, mRNA sequence
Length = 870
Score = 139 bits (70), Expect = 4e-031
Identities = 235/290 (81%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 577 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 636
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 637 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 696
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 697 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 756
Query: 752 ggtgcttcctctttgttttttgtgtactccctggactacgcgagaacaaggttggctaat 811
||||| || ||| | ||||||| || || ||||||| || |||| || ||||||||
Sbjct: 757 ggtgcatcttctctcctttttgtttattctttggactatgctcgaactcggctggctaat 816
Query: 812 gatgcgaaggctgccaagggaggaggtgaaaggcagttcaatgggcttgt 861
||| |||||||| ||| ||||| || ||||| || |||||||||||
Sbjct: 817 gataacaaggctgcaaagaagggaggggagaggcaatttaatgggcttgt 866
>gb|BX249370.1|BX249370 BX249370 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP023C03 similar to ADP,ATP CARRIER PROTEIN,
mRNA sequence
Length = 669
Score = 137 bits (69), Expect = 2e-030
Identities = 156/185 (84%)
Strand = Plus / Plus
Query: 572 aaggatgaaggtttctcttccttgtggaggggtaacactgctaatgttattcgttacttc 631
|||||||||||| || | | || ||||| || |||||||| |||||||| ||||| ||
Sbjct: 291 aaggatgaaggtgtcattgcgttatggagaggaaacactgcaaatgttatccgttatttt 350
Query: 632 cctactcaggctttgaactttgcatttaaggactacttcaagaggttgttcaacttcaag 691
|| |||||||||||||||||||| || ||||| ||||| ||||| | || || ||||||
Sbjct: 351 cccactcaggctttgaactttgcgttcaaggattactttaagagactctttaatttcaag 410
Query: 692 aaggatagggatggctattggaagtggtttgctggcaacctggcctctggtggtgctgct 751
|| || |||||||| || ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct: 411 aaagacagggatggttactggaaatggtttgctggaaacctggcctctggtggtgcagct 470
Query: 752 ggtgc 756
|||||
Sbjct: 471 ggtgc 475
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 227,641
Number of Sequences: 355925
Number of extensions: 227641
Number of successful extensions: 59975
Number of sequences better than 0.5: 299
Number of HSP's better than 0.5 without gapping: 299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59035
Number of HSP's gapped (non-prelim): 864
length of query: 1666
length of database: 217,277,237
effective HSP length: 20
effective length of query: 1646
effective length of database: 210,158,737
effective search space: 345921281102
effective search space used: 345921281102
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)