BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.448
(911 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR177584.1|DR177584 RTMNUT1_6_E02.b1_A029 Roots minus mi... 222 2e-056
gb|DR177664.1|DR177664 RTMNUT1_6_E02.g1_A029 Roots minus mi... 222 2e-056
gb|AW290009.1|AW290009 NXNV009E11F Nsf Xylem Normal wood Ve... 216 1e-054
gb|CD026677.1|CD026677 NXNV009E11 Nsf Xylem Normal wood Ver... 216 1e-054
gb|AW011226.1|AW011226 ST18C02 Pine TriplEx shoot tip libra... 214 5e-054
gb|CF399744.1|CF399744 RTDS3_25_E10.g1_A022 Drought-stresse... 214 5e-054
gb|CF471295.1|CF471295 RTDS1_2_C06.g1_A015 Drought-stressed... 214 5e-054
gb|CF472091.1|CF472091 RTDS1_8_E12.g1_A015 Drought-stressed... 214 5e-054
gb|CF478324.1|CF478324 RTWW3_18_G01.g1_A022 Well-watered lo... 214 5e-054
gb|CF667615.1|CF667615 RTCNT1_31_A11.g1_A029 Root control P... 214 5e-054
gb|CF671496.1|CF671496 RTCNT1_57_A12.g1_A029 Root control P... 214 5e-054
gb|CF673041.1|CF673041 RTCNT1_75_D11.g1_A029 Root control P... 214 5e-054
gb|CO168622.1|CO168622 NDL1_1_A01.g1_A029 Needles control P... 214 5e-054
gb|CO168631.1|CO168631 NDL1_1_B01.g1_A029 Needles control P... 214 5e-054
gb|CO170092.1|CO170092 NDL1_11_D07.g1_A029 Needles control ... 214 5e-054
gb|CO174074.1|CO174074 NDL1_41_C01.g1_A029 Needles control ... 214 5e-054
gb|CO175730.1|CO175730 NDL1_56_D03.g1_A029 Needles control ... 214 5e-054
gb|CO198415.1|CO198415 GEO1_13_B09.g1_A029 Root gravitropis... 214 5e-054
gb|CX646426.1|CX646426 COLD1_9_F11.b1_A029 Root cold Pinus ... 214 5e-054
gb|CX646508.1|CX646508 COLD1_9_F11.g1_A029 Root cold Pinus ... 214 5e-054
gb|DR024860.1|DR024860 STRS1_68_B06.b1_A034 Shoot tip pitch... 214 5e-054
gb|DR047783.1|DR047783 RTBOR1_3_B03.g1_A029 Roots plus adde... 214 5e-054
gb|DR048154.1|DR048154 RTBOR1_7_A02.b2_A029 Roots plus adde... 214 5e-054
gb|DR048230.1|DR048230 RTBOR1_7_A02.g2_A029 Roots plus adde... 214 5e-054
gb|DR050741.1|DR050741 RTBOR1_25_H11.b1_A029 Roots plus add... 214 5e-054
gb|DR050828.1|DR050828 RTBOR1_25_H11.g1_A029 Roots plus add... 214 5e-054
gb|DR055195.1|DR055195 RTCA1_22_E01.b1_A029 Roots minus cal... 214 5e-054
gb|DR059173.1|DR059173 RTNIT1_16_D06.b1_A029 Roots minus ni... 214 5e-054
gb|DR071310.1|DR071310 RTDK1_19_C01.b1_A029 Roots, dark Pin... 214 5e-054
gb|DR071357.1|DR071357 RTDK1_19_G10.b1_A029 Roots, dark Pin... 214 5e-054
gb|DR071434.1|DR071434 RTDK1_19_G10.g1_A029 Roots, dark Pin... 214 5e-054
gb|DR081816.1|DR081816 RTFEPL1_32_C02.g1_A029 Roots plus ad... 214 5e-054
gb|DR093393.1|DR093393 STRR1_8_A12.b1_A033 Stem Response Re... 214 5e-054
gb|DR093470.1|DR093470 STRR1_8_A12.g1_A033 Stem Response Re... 214 5e-054
gb|DR095952.1|DR095952 STRR1_24_F02.g1_A033 Stem Response R... 214 5e-054
gb|DR096305.1|DR096305 STRR1_27_D06.b1_A033 Stem Response R... 214 5e-054
gb|DR096384.1|DR096384 STRR1_27_D06.g1_A033 Stem Response R... 214 5e-054
gb|DR097085.1|DR097085 STRR1_32_H10.b1_A033 Stem Response R... 214 5e-054
gb|DR097160.1|DR097160 STRR1_32_H10.g1_A033 Stem Response R... 214 5e-054
gb|DR120261.1|DR120261 RTMG1_28_C05.g2_A029 Roots minus mag... 214 5e-054
gb|DR168371.1|DR168371 RTPHOS1_25_B04.b1_A029 Roots minus p... 214 5e-054
gb|DR742407.1|DR742407 RTCU1_3_G04.g2_A029 Roots plus added... 214 5e-054
gb|CF667537.1|CF667537 RTCNT1_31_A11.b1_A029 Root control P... 212 2e-053
gb|BE209356.1|BE209356 NXNV_166_G07_F Nsf Xylem Normal wood... 210 7e-053
gb|CO170011.1|CO170011 NDL1_11_D07.b1_A029 Needles control ... 208 3e-052
gb|DR024937.1|DR024937 STRS1_68_B06.g1_A034 Shoot tip pitch... 208 3e-052
gb|DR047717.1|DR047717 RTBOR1_3_B03.b1_A029 Roots plus adde... 208 3e-052
gb|DR168441.1|DR168441 RTPHOS1_25_B04.g1_A029 Roots minus p... 208 3e-052
gb|AA556468.1|AA556468 323 Loblolly pine C Pinus taeda cDNA... 206 1e-051
gb|DN634442.1|DN634442 EST985258 Subtracted pine embryo lib... 206 1e-051
gb|DR054561.1|DR054561 RTCA1_18_D03.b1_A029 Roots minus cal... 206 1e-051
gb|DR054640.1|DR054640 RTCA1_18_D03.g1_A029 Roots minus cal... 206 1e-051
gb|DR095762.1|DR095762 STRR1_23_A09.g1_A033 Stem Response R... 206 1e-051
gb|AI812876.1|AI812876 22A4 Pine Lambda Zap Xylem library P... 202 2e-050
gb|CO174001.1|CO174001 NDL1_41_C01.b1_A029 Needles control ... 194 4e-048
gb|AI813166.1|AI813166 23G10 Pine Lambda Zap Xylem library ... 190 7e-047
gb|BX249581.1|BX249581 BX249581 Pinus pinaster differenciat... 190 7e-047
gb|BX252086.1|BX252086 BX252086 Pinus pinaster differenciat... 190 7e-047
gb|BX675192.1|BX675192 BX675192 RN Pinus pinaster cDNA clon... 190 7e-047
gb|BX680586.1|BX680586 BX680586 RS Pinus pinaster cDNA clon... 190 7e-047
gb|CO172875.1|CO172875 NDL1_32_B02.g1_A029 Needles control ... 190 7e-047
gb|DN631246.1|DN631246 EST982062 Subtracted pine embryo lib... 190 7e-047
gb|CF472067.1|CF472067 RTDS1_8_E12.b1_A015 Drought-stressed... 188 3e-046
gb|BM133582.1|BM133582 NXLV_009_B03_F NXLV (Nsf Xylem Late ... 186 1e-045
gb|CD028439.1|CD028439 NXSI_119_A09_F NXSI (Nsf Xylem Side ... 186 1e-045
gb|AL749762.1|AL749762 AL749762 AN Pinus pinaster cDNA clon... 184 4e-045
gb|AI812848.1|AI812848 20G11 Pine Lambda Zap Xylem library ... 182 2e-044
gb|BX252126.1|BX252126 BX252126 Pinus pinaster differenciat... 182 2e-044
gb|DR100624.1|DR100624 STRR1_66_A05.b1_A033 Stem Response R... 182 2e-044
gb|DT630716.1|DT630716 EST1155128 Subtracted pine embryo li... 182 2e-044
gb|CF399664.1|CF399664 RTDS3_25_E10.b1_A022 Drought-stresse... 174 4e-042
gb|DN630864.1|DN630864 EST981680 Subtracted pine embryo lib... 174 4e-042
gb|DN634290.1|DN634290 EST985106 Subtracted pine embryo lib... 174 4e-042
gb|DT630221.1|DT630221 EST1154633 Subtracted pine embryo li... 174 4e-042
gb|DR071388.1|DR071388 RTDK1_19_C01.g1_A029 Roots, dark Pin... 172 2e-041
gb|CR393515.1|CR393515 CR393515 RN Pinus pinaster cDNA clon... 170 6e-041
gb|CR393636.1|CR393636 CR393636 RN Pinus pinaster cDNA clon... 170 6e-041
gb|BF609002.1|BF609002 NXSI_039_C06_F NXSI (Nsf Xylem Side ... 168 3e-040
gb|BG275388.1|BG275388 NXSI_141_A06_F NXSI (Nsf Xylem Side ... 168 3e-040
gb|DR081754.1|DR081754 RTFEPL1_32_C02.b1_A029 Roots plus ad... 167 1e-039
gb|DN631897.1|DN631897 EST982713 Subtracted pine embryo lib... 165 4e-039
gb|DN633035.1|DN633035 EST983851 Subtracted pine embryo lib... 165 4e-039
gb|BX677193.1|BX677193 BX677193 RN Pinus pinaster cDNA clon... 153 1e-035
gb|CO172803.1|CO172803 NDL1_32_B02.b1_A029 Needles control ... 151 6e-035
gb|AW783947.1|AW783947 NXNV_096_A02_F Nsf Xylem Normal wood... 149 2e-034
gb|BG317627.1|BG317627 NXPV_003_H12_F NXPV (Nsf Xylem Plani... 131 5e-029
gb|BF518133.1|BF518133 NXSI_035_D08_F NXSI (Nsf Xylem Side ... 127 9e-028
gb|CR393732.1|CR393732 CR393732 RN Pinus pinaster cDNA clon... 107 8e-022
gb|DR093799.1|DR093799 STRR1_10_B05.g1_A033 Stem Response R... 107 8e-022
gb|AW870206.1|AW870206 NXNV_125_E08_F Nsf Xylem Normal wood... 103 1e-020
gb|DR050985.1|DR050985 RTBOR1_27_A06.b1_A029 Roots plus add... 98 8e-019
gb|DR059255.1|DR059255 RTNIT1_16_D06.g1_A029 Roots minus ni... 98 8e-019
gb|BX676866.1|BX676866 BX676866 RN Pinus pinaster cDNA clon... 96 3e-018
gb|BX676939.1|BX676939 BX676939 RN Pinus pinaster cDNA clon... 96 3e-018
gb|CR393446.1|CR393446 CR393446 RN Pinus pinaster cDNA clon... 96 3e-018
gb|BQ701995.1|BQ701995 NXSI_123_B02_F NXSI (Nsf Xylem Side ... 90 2e-016
gb|DR080737.1|DR080737 RTFEPL1_24_G10.g1_A029 Roots plus ad... 90 2e-016
gb|BX254513.1|BX254513 BX254513 Pinus pinaster differenciat... 86 3e-015
gb|BQ699594.1|BQ699594 NXRV124_C10_F NXRV (Nsf Xylem Root w... 86 3e-015
gb|CF391176.1|CF391176 RTDR3_4_H03.b1_A022 Loblolly pine ro... 86 3e-015
gb|CF391211.1|CF391211 RTDR3_4_H03.g1_A022 Loblolly pine ro... 86 3e-015
gb|CF474315.1|CF474315 RTWW2_20_E08.b1_A021 Well-watered lo... 86 3e-015
gb|CF474458.1|CF474458 RTWW2_20_E08.g1_A021 Well-watered lo... 86 3e-015
gb|CF475279.1|CF475279 RTWW2_13_A11.b1_A021 Well-watered lo... 86 3e-015
gb|CF475331.1|CF475331 RTWW2_13_A11.g1_A021 Well-watered lo... 86 3e-015
gb|CF476078.1|CF476078 RTWW2_16_A01.g1_A021 Well-watered lo... 86 3e-015
gb|CF671649.1|CF671649 RTCNT1_58_H11.b1_A029 Root control P... 86 3e-015
gb|DR024686.1|DR024686 STRS1_66_G03.g1_A034 Shoot tip pitch... 86 3e-015
gb|DR060513.1|DR060513 RTNIT1_28_G06.b1_A029 Roots minus ni... 86 3e-015
gb|BF516724.1|BF516724 NXSI_002_F03_F NXSI (Nsf Xylem Side ... 84 1e-014
gb|AW042785.1|AW042785 ST25D05 Pine TriplEx shoot tip libra... 80 2e-013
gb|BQ695862.1|BQ695862 NXPV_033_E05_F NXPV (Nsf Xylem Plani... 80 2e-013
gb|DR051063.1|DR051063 RTBOR1_27_A06.g1_A029 Roots plus add... 80 2e-013
gb|AW064562.1|AW064562 ST33A09 Pine TriplEx shoot tip libra... 74 1e-011
gb|DR743979.1|DR743979 RTCU1_19_A08.g1_A029 Roots plus adde... 74 1e-011
gb|BF609470.1|BF609470 NXSI_043_A03_F NXSI (Nsf Xylem Side ... 70 2e-010
gb|AW888060.1|AW888060 NXNV_126_G09_F Nsf Xylem Normal wood... 56 3e-006
gb|BE123777.1|BE123777 NXNV_156_C03_F Nsf Xylem Normal wood... 56 3e-006
gb|CO167131.1|CO167131 FLD1_67_C01.b1_A029 Root flooded Pin... 54 1e-005
gb|CO167202.1|CO167202 FLD1_67_C01.g1_A029 Root flooded Pin... 54 1e-005
gb|AL749551.1|AL749551 AL749551 AN Pinus pinaster cDNA clon... 50 2e-004
gb|BQ699321.1|BQ699321 NXRV126_D05_F NXRV (Nsf Xylem Root w... 48 6e-004
gb|DR120185.1|DR120185 RTMG1_28_C05.b1_A029 Roots minus mag... 46 0.003
gb|AW754686.1|AW754686 PC05B07 Pine TriplEx pollen cone lib... 42 0.039
gb|BM158001.1|BM158001 NXLV_028_B11_F NXLV (Nsf Xylem Late ... 42 0.039
gb|BQ695516.1|BQ695516 NXPV_025_D12_F NXPV (Nsf Xylem Plani... 40 0.15
>gb|DR177584.1|DR177584 RTMNUT1_6_E02.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_6_E02_A029 3', mRNA sequence
Length = 729
Score = 222 bits (112), Expect = 2e-056
Identities = 259/308 (84%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 325 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 266
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 265 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 206
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 205 acctgattgaatgtcttcccattgtaaacgccaataatgctaccaatcatctcaggaaca 146
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 145 attatcatgttacggagatgagttctaactggctctggtttctcacctgcaggagcttcc 86
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| || ||||| |||| |||||||| ||| | |||
Sbjct: 85 cgtttcgccttacggagcttcttgaccagggccattggctgcctcttcaaacctcgctga 26
Query: 667 aaccttct 674
||||||||
Sbjct: 25 aaccttct 18
>gb|DR177664.1|DR177664 RTMNUT1_6_E02.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_6_E02_A029 5', mRNA sequence
Length = 735
Score = 222 bits (112), Expect = 2e-056
Identities = 259/308 (84%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 451 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 392
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 391 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 332
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 331 acctgattgaatgtcttcccattgtaaacgccaataatgctaccaatcatctcaggaaca 272
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 271 attatcatgttacggagatgagttctaactggctctggtttctcacctgcaggagcttcc 212
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| || ||||| |||| |||||||| ||| | |||
Sbjct: 211 cgtttcgccttacggagcttcttgaccagggccattggctgcctcttcaaacctcgctga 152
Query: 667 aaccttct 674
||||||||
Sbjct: 151 aaccttct 144
>gb|AW290009.1|AW290009 NXNV009E11F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV009E11 5', mRNA sequence
Length = 504
Score = 216 bits (109), Expect = 1e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 364 ttcagaggaataaacctagaggagtgtgtagcaccnataccaggtctcccatgcttaact 305
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 304 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 245
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 244 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 185
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 184 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 125
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 124 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 65
Query: 667 aaccttct 674
||||||||
Sbjct: 64 aaccttct 57
>gb|CD026677.1|CD026677 NXNV009E11 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV009E11 5' similar to Arabidopsis thaliana sequence
At5g09510 ribosomal protein S15-like see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 504
Score = 216 bits (109), Expect = 1e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 364 ttcagaggaataaacctagaggagtgtgtagcaccnataccaggtctcccatgcttaact 305
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 304 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 245
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 244 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 185
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 184 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 125
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 124 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 65
Query: 667 aaccttct 674
||||||||
Sbjct: 64 aaccttct 57
>gb|AW011226.1|AW011226 ST18C02 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST18C02, mRNA sequence
Length = 599
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 447 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 388
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 387 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 328
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 327 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 268
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 267 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 208
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 207 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 148
Query: 667 aaccttct 674
||||||||
Sbjct: 147 aaccttct 140
>gb|CF399744.1|CF399744 RTDS3_25_E10.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_25_E10_A022 5', mRNA sequence
Length = 654
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 522 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 463
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 462 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 403
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 402 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 343
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 342 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 283
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 282 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 223
Query: 667 aaccttct 674
||||||||
Sbjct: 222 aaccttct 215
>gb|CF471295.1|CF471295 RTDS1_2_C06.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_2_C06_A015 5', mRNA sequence
Length = 736
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 520 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 461
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 460 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 401
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 400 acctgattgaatgtcttcccattgtaaacgccaataatgctaccaatcatctcaggaaca 341
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 340 attatcatgttacggagatgagttctaactggctctggtttctcacctgcaggagcttcc 281
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 280 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 221
Query: 667 aaccttct 674
||||||||
Sbjct: 220 aaccttct 213
>gb|CF472091.1|CF472091 RTDS1_8_E12.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_8_E12_A015 5', mRNA sequence
Length = 746
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 506 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 447
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 446 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 387
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 386 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 327
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 326 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 267
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 266 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 207
Query: 667 aaccttct 674
||||||||
Sbjct: 206 aaccttct 199
>gb|CF478324.1|CF478324 RTWW3_18_G01.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_18_G01_A022 5', mRNA sequence
Length = 736
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 513 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 454
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 453 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 394
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 393 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 334
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 333 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 274
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 273 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 214
Query: 667 aaccttct 674
||||||||
Sbjct: 213 aaccttct 206
>gb|CF667615.1|CF667615 RTCNT1_31_A11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_31_A11_A029 5', mRNA sequence
Length = 743
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 540 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 481
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 480 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 421
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 420 acctgattgaatgtcttcccattgtaaacgccaataatgctaccaatcatctcaggaaca 361
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 360 attatcatgttacggagatgagttctaactggctctggtttctcacctgcaggagcttcc 301
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 300 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 241
Query: 667 aaccttct 674
||||||||
Sbjct: 240 aaccttct 233
>gb|CF671496.1|CF671496 RTCNT1_57_A12.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_57_A12_A029 5', mRNA sequence
Length = 690
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 543 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 484
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 483 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 424
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 423 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 364
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 363 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 304
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 303 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 244
Query: 667 aaccttct 674
||||||||
Sbjct: 243 aaccttct 236
>gb|CF673041.1|CF673041 RTCNT1_75_D11.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_75_D11_A029 5', mRNA sequence
Length = 789
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 528 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 469
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 468 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 409
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 408 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 349
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 348 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 289
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 288 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 229
Query: 667 aaccttct 674
||||||||
Sbjct: 228 aaccttct 221
>gb|CO168622.1|CO168622 NDL1_1_A01.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_1_A01_A029 5', mRNA sequence
Length = 714
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 517 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 458
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 457 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 398
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 397 acctgattgaatgtcttcccattgtaaacgccaataatgctaccaatcatctcaggaaca 338
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 337 attatcatgttacggagatgagttctaactggctctggtttctcacctgcaggagcttcc 278
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 277 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 218
Query: 667 aaccttct 674
||||||||
Sbjct: 217 aaccttct 210
>gb|CO168631.1|CO168631 NDL1_1_B01.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_1_B01_A029 5', mRNA sequence
Length = 586
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 519 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 460
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 459 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 400
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 399 acctgattgaatgtcttcccattgtaaacgccaataatgctaccaatcatctcaggaaca 340
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 339 attatcatgttacggagatgagttctaactggctctggtttctcacctgcaggagcttcc 280
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 279 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 220
Query: 667 aaccttct 674
||||||||
Sbjct: 219 aaccttct 212
>gb|CO170092.1|CO170092 NDL1_11_D07.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_11_D07_A029 5', mRNA sequence
Length = 786
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 511 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 452
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 451 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 392
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 391 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 332
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 331 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 272
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 271 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 212
Query: 667 aaccttct 674
||||||||
Sbjct: 211 aaccttct 204
>gb|CO174074.1|CO174074 NDL1_41_C01.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_41_C01_A029 5', mRNA sequence
Length = 708
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 491 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 432
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 431 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 372
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 371 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 312
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 311 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 252
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 251 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 192
Query: 667 aaccttct 674
||||||||
Sbjct: 191 aaccttct 184
>gb|CO175730.1|CO175730 NDL1_56_D03.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_56_D03_A029 5', mRNA sequence
Length = 776
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 556 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 497
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 496 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 437
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 436 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 377
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 376 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 317
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 316 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 257
Query: 667 aaccttct 674
||||||||
Sbjct: 256 aaccttct 249
>gb|CO198415.1|CO198415 GEO1_13_B09.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_13_B09_A029 5', mRNA sequence
Length = 690
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 458 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 399
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 398 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 339
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 338 acctgattgaatgtcttcccattgtaaacgccaataatgctaccaatcatctcaggaaca 279
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 278 attatcatgttacggagatgagttctaactggctctggtttctcacctgcaggagcttcc 219
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 218 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 159
Query: 667 aaccttct 674
||||||||
Sbjct: 158 aaccttct 151
>gb|CX646426.1|CX646426 COLD1_9_F11.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_9_F11_A029 3', mRNA sequence
Length = 811
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 503 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 444
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 443 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 384
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 383 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 324
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 323 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 264
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 263 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 204
Query: 667 aaccttct 674
||||||||
Sbjct: 203 aaccttct 196
>gb|CX646508.1|CX646508 COLD1_9_F11.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_9_F11_A029 5', mRNA sequence
Length = 869
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 562 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 503
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 502 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 443
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 442 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 383
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 382 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 323
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 322 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 263
Query: 667 aaccttct 674
||||||||
Sbjct: 262 aaccttct 255
>gb|DR024860.1|DR024860 STRS1_68_B06.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_68_B06_A034 3', mRNA sequence
Length = 611
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 313 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 254
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 253 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 194
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 193 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 134
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 133 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 74
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 73 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 14
Query: 667 aaccttct 674
||||||||
Sbjct: 13 aaccttct 6
>gb|DR047783.1|DR047783 RTBOR1_3_B03.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_3_B03_A029 5', mRNA sequence
Length = 573
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 550 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 491
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 490 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 431
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 430 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 371
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 370 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 311
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 310 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 251
Query: 667 aaccttct 674
||||||||
Sbjct: 250 aaccttct 243
>gb|DR048154.1|DR048154 RTBOR1_7_A02.b2_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_7_A02_A029 3', mRNA sequence
Length = 723
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 327 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 268
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 267 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 208
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 207 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 148
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 147 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 88
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 87 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 28
Query: 667 aaccttct 674
||||||||
Sbjct: 27 aaccttct 20
>gb|DR048230.1|DR048230 RTBOR1_7_A02.g2_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_7_A02_A029 5', mRNA sequence
Length = 822
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 535 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 476
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 475 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 416
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 415 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 356
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 355 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 296
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 295 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 236
Query: 667 aaccttct 674
||||||||
Sbjct: 235 aaccttct 228
>gb|DR050741.1|DR050741 RTBOR1_25_H11.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_25_H11_A029 3', mRNA sequence
Length = 900
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Plus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 366 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 425
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 426 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 485
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 486 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 545
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 546 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 605
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 606 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 665
Query: 667 aaccttct 674
||||||||
Sbjct: 666 aaccttct 673
>gb|DR050828.1|DR050828 RTBOR1_25_H11.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_25_H11_A029 5', mRNA sequence
Length = 904
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Plus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 400 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 459
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 460 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 519
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 520 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 579
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 580 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 639
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 640 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 699
Query: 667 aaccttct 674
||||||||
Sbjct: 700 aaccttct 707
>gb|DR055195.1|DR055195 RTCA1_22_E01.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_22_E01_A029 3', mRNA sequence
Length = 749
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Plus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 215 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 274
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 275 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 334
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 335 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 394
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 395 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 454
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 455 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 514
Query: 667 aaccttct 674
||||||||
Sbjct: 515 aaccttct 522
>gb|DR059173.1|DR059173 RTNIT1_16_D06.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_16_D06_A029 3', mRNA sequence
Length = 551
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Plus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 40 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 99
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 100 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 159
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 160 acctgattgaatgtcttcccattgtaaacgccaataatgctaccaatcatctcaggaaca 219
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 220 attatcatgttacggagatgagttctaactggctctggtttctcacctgcaggagcttcc 279
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 280 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 339
Query: 667 aaccttct 674
||||||||
Sbjct: 340 aaccttct 347
>gb|DR071310.1|DR071310 RTDK1_19_C01.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_19_C01_A029 3', mRNA sequence
Length = 860
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 429 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 370
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 369 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 310
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 309 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 250
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 249 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 190
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 189 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 130
Query: 667 aaccttct 674
||||||||
Sbjct: 129 aaccttct 122
>gb|DR071357.1|DR071357 RTDK1_19_G10.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_19_G10_A029 3', mRNA sequence
Length = 772
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 532 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 473
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 472 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 413
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 412 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 353
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 352 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 293
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 292 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 233
Query: 667 aaccttct 674
||||||||
Sbjct: 232 aaccttct 225
>gb|DR071434.1|DR071434 RTDK1_19_G10.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_19_G10_A029 5', mRNA sequence
Length = 656
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 515 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 456
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 455 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 396
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 395 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 336
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 335 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 276
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 275 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 216
Query: 667 aaccttct 674
||||||||
Sbjct: 215 aaccttct 208
>gb|DR081816.1|DR081816 RTFEPL1_32_C02.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_32_C02_A029 5', mRNA sequence
Length = 579
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 523 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 464
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 463 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 404
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 403 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 344
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 343 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 284
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 283 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 224
Query: 667 aaccttct 674
||||||||
Sbjct: 223 aaccttct 216
>gb|DR093393.1|DR093393 STRR1_8_A12.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_8_A12_A033 3', mRNA sequence
Length = 893
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 489 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 430
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 429 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 370
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 369 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 310
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 309 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 250
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 249 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 190
Query: 667 aaccttct 674
||||||||
Sbjct: 189 aaccttct 182
>gb|DR093470.1|DR093470 STRR1_8_A12.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_8_A12_A033 5', mRNA sequence
Length = 877
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 522 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 463
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 462 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 403
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 402 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 343
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 342 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 283
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 282 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 223
Query: 667 aaccttct 674
||||||||
Sbjct: 222 aaccttct 215
>gb|DR095952.1|DR095952 STRR1_24_F02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_24_F02_A033 5', mRNA sequence
Length = 727
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 502 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 443
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 442 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 383
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 382 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 323
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 322 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 263
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 262 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 203
Query: 667 aaccttct 674
||||||||
Sbjct: 202 aaccttct 195
>gb|DR096305.1|DR096305 STRR1_27_D06.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_27_D06_A033 3', mRNA sequence
Length = 776
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 384 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 325
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 324 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 265
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 264 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 205
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 204 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 145
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 144 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 85
Query: 667 aaccttct 674
||||||||
Sbjct: 84 aaccttct 77
>gb|DR096384.1|DR096384 STRR1_27_D06.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_27_D06_A033 5', mRNA sequence
Length = 784
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 433 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 374
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 373 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 314
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 313 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 254
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 253 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 194
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 193 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 134
Query: 667 aaccttct 674
||||||||
Sbjct: 133 aaccttct 126
>gb|DR097085.1|DR097085 STRR1_32_H10.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_32_H10_A033 3', mRNA sequence
Length = 742
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 344 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 285
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 284 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 225
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 224 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 165
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 164 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 105
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 104 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 45
Query: 667 aaccttct 674
||||||||
Sbjct: 44 aaccttct 37
>gb|DR097160.1|DR097160 STRR1_32_H10.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_32_H10_A033 5', mRNA sequence
Length = 678
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 475 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 416
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 415 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 356
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 355 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 296
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 295 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 236
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 235 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 176
Query: 667 aaccttct 674
||||||||
Sbjct: 175 aaccttct 168
>gb|DR120261.1|DR120261 RTMG1_28_C05.g2_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_28_C05_A029 5', mRNA sequence
Length = 530
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 472 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 413
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 412 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 353
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 352 acctgattgaatgtcttcccattgtaaacgccaataatgctaccaatcatctcaggaaca 293
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 292 attatcatgttacggagatgagttctaactggctctggtttctcacctgcaggagcttcc 233
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 232 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 173
Query: 667 aaccttct 674
||||||||
Sbjct: 172 aaccttct 165
>gb|DR168371.1|DR168371 RTPHOS1_25_B04.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_25_B04_A029 3', mRNA sequence
Length = 658
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Plus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 132 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 191
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 192 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 251
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 252 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 311
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 312 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 371
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 372 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 431
Query: 667 aaccttct 674
||||||||
Sbjct: 432 aaccttct 439
>gb|DR742407.1|DR742407 RTCU1_3_G04.g2_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_3_G04_A029 5', mRNA sequence
Length = 747
Score = 214 bits (108), Expect = 5e-054
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 513 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 454
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 453 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 394
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 393 acctgattgaatgtcttcccattgtaaacgccaataatgctaccaatcatctcaggaaca 334
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 333 attatcatgttacggagatgagttctaactggctctggtttctcacctgcaggagcttcc 274
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 273 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 214
Query: 667 aaccttct 674
||||||||
Sbjct: 213 aaccttct 206
>gb|CF667537.1|CF667537 RTCNT1_31_A11.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_31_A11_A029 3', mRNA sequence
Length = 739
Score = 212 bits (107), Expect = 2e-053
Identities = 257/307 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 307 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 248
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 247 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 188
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 187 acctgattgaatgtcttcccattgtaaacgccaataatgctaccaatcatctcaggaaca 128
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 127 attatcatgttacggagatgagttctaactggctctggtttctcacctgcaggagcttcc 68
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 67 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 8
Query: 667 aaccttc 673
|||||||
Sbjct: 7 aaccttc 1
>gb|BE209356.1|BE209356 NXNV_166_G07_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_166_G07 5' similar to Arabidopsis thaliana
sequence At5g09510 ribosomal protein S15-like see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 438
Score = 210 bits (106), Expect = 7e-053
Identities = 257/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 327 ttcagaggaataaanntagaggagtgtgtagcaccaataccaggtctcccatgcttaact 268
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 267 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 208
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 207 acctgattgaatgtcttcccattgtaaacgccaataatgctaccaatcatctcaggaaca 148
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 147 attatcatgttacggagatgagttctaactggctctggtttctcacctgcaggagcttcc 88
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| || ||||| |||| |||||||| ||| | |||
Sbjct: 87 cgtttcgccttacggagcttcttgaccagggccattggctgcctcttcaaacctcgctga 28
Query: 667 aaccttct 674
||||||||
Sbjct: 27 aaccttct 20
>gb|CO170011.1|CO170011 NDL1_11_D07.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_11_D07_A029 3', mRNA sequence
Length = 649
Score = 208 bits (105), Expect = 3e-052
Identities = 225/265 (84%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 303 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 244
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 243 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 184
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 183 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 124
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 123 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 64
Query: 607 tttttcgccttgcgcagcttcttga 631
||||||||| || ||||||||||
Sbjct: 63 cgtttcgccttacggagcttcttga 39
>gb|DR024937.1|DR024937 STRS1_68_B06.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_68_B06_A034 5', mRNA sequence
Length = 341
Score = 208 bits (105), Expect = 3e-052
Identities = 225/265 (84%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 291 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 232
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 231 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 172
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 171 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 112
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 111 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 52
Query: 607 tttttcgccttgcgcagcttcttga 631
||||||||| || ||||||||||
Sbjct: 51 cgtttcgccttacggagcttcttga 27
>gb|DR047717.1|DR047717 RTBOR1_3_B03.b1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_3_B03_A029 3', mRNA sequence
Length = 705
Score = 208 bits (105), Expect = 3e-052
Identities = 225/265 (84%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 288 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 229
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 228 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 169
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 168 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 109
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 108 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 49
Query: 607 tttttcgccttgcgcagcttcttga 631
||||||||| || ||||||||||
Sbjct: 48 cgtttcgccttacggagcttcttga 24
>gb|DR168441.1|DR168441 RTPHOS1_25_B04.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_25_B04_A029 5', mRNA sequence
Length = 639
Score = 208 bits (105), Expect = 3e-052
Identities = 225/265 (84%)
Strand = Plus / Plus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 374 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 433
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 434 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 493
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 494 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 553
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 554 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 613
Query: 607 tttttcgccttgcgcagcttcttga 631
||||||||| || ||||||||||
Sbjct: 614 cgtttcgccttacggagcttcttga 638
>gb|AA556468.1|AA556468 323 Loblolly pine C Pinus taeda cDNA clone 4C1F, mRNA sequence
Length = 669
Score = 206 bits (104), Expect = 1e-051
Identities = 224/264 (84%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 264 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 205
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|||||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 204 ggcttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 145
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 144 acctgattgaatgtcttcccattgtaaacgccaataatgctaccaatcatctcaggaaca 85
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 84 attatcatgttacggagatgagttctaactggctctggtttctcacctgcaggagcttcc 25
Query: 607 tttttcgccttgcgcagcttcttg 630
||||||||| || |||||||||
Sbjct: 24 cgtttcgccttacggagcttcttg 1
>gb|DN634442.1|DN634442 EST985258 Subtracted pine embryo library, Lib_C Pinus taeda cDNA
clone PTADM60, mRNA sequence
Length = 791
Score = 206 bits (104), Expect = 1e-051
Identities = 257/308 (83%)
Strand = Plus / Minus
Query: 367 ttcagaggaataaaccgcgaggagtgggtggcaccgataccgggcctgccatgcttgacc 426
|||||||||||||||| |||||||| || ||||| ||||| || || |||||||| ||
Sbjct: 567 ttcagaggaataaacctagaggagtgtgtagcaccaataccaggtctcccatgcttaact 508
Query: 427 ggcttataggagatggagaactcagcaaggtagtggccgatcatctcaggcttgatctca 486
|| ||||| || || || ||||| || || || ||||| ||||||||||||||||| |||
Sbjct: 507 ggtttatacgaaatagaaaactctgccagataatggccaatcatctcaggcttgatttca 448
Query: 487 acctggttgaaggtcttgccgttgtagaccccaacaatgcttccaatcatctcagggaca 546
||||| ||||| ||||| || ||||| || |||| |||||| |||||||||||||| |||
Sbjct: 447 acctgattgaatgtcttcccattgtaaacaccaataatgctaccaatcatctcaggaaca 388
Query: 547 atgatcatgttacggagatgtgtcttgactggctctggtttctcaccagcaggagcatcc 606
|| ||||||||||||||||| || | |||||||||||||||||||| |||||||| |||
Sbjct: 387 attatcatgttacggagatgggttctaactggctctggtttctcacctgcaggagcttcc 328
Query: 607 tttttcgccttgcgcagcttcttgatgagtgccatgggcttcctcttcagacccctctgg 666
||||||||| || |||||||||| | ||||| |||| |||||||| ||| | |||
Sbjct: 327 cgtttcgccttacggagcttcttgaccaaggccattggctgcctcttcaaacctcgctga 268
Query: 667 aaccttct 674
||||||||
Sbjct: 267 aaccttct 260
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 109,391
Number of Sequences: 355925
Number of extensions: 109391
Number of successful extensions: 29404
Number of sequences better than 0.5: 126
Number of HSP's better than 0.5 without gapping: 125
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 29119
Number of HSP's gapped (non-prelim): 160
length of query: 911
length of database: 217,277,237
effective HSP length: 19
effective length of query: 892
effective length of database: 210,514,662
effective search space: 187779078504
effective search space used: 187779078504
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)