BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.426
(1721 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BX784188.1|BX784188 BX784188 Pinus pinaster differenciat... 214 9e-054
gb|BQ634287.1|BQ634287 NXRV067_A07_F NXRV (Nsf Xylem Root w... 204 9e-051
gb|CF394023.1|CF394023 RTDS2_2_E04.g1_A021 Drought-stressed... 204 9e-051
gb|CO164871.1|CO164871 FLD1_50_G08.g1_A029 Root flooded Pin... 204 9e-051
gb|CO167141.1|CO167141 FLD1_67_D01.b1_A029 Root flooded Pin... 204 9e-051
gb|DR019041.1|DR019041 STRS1_27_A10.g1_A034 Shoot tip pitch... 204 9e-051
gb|DR055331.1|DR055331 RTCA1_23_B04.b1_A029 Roots minus cal... 204 9e-051
gb|DR072361.1|DR072361 RTDK1_25_F11.g1_A029 Roots, dark Pin... 204 9e-051
gb|DR119088.1|DR119088 RTMG1_21_C02.b1_A029 Roots minus mag... 204 9e-051
gb|DR165853.1|DR165853 RTPHOS1_7_F02.g1_A029 Roots minus ph... 204 9e-051
gb|DR386244.1|DR386244 RTHG1_13_G10.g1_A029 Roots plus adde... 204 9e-051
gb|BF610148.1|BF610148 NXSI_055_C08_F NXSI (Nsf Xylem Side ... 202 3e-050
gb|BX249370.1|BX249370 BX249370 Pinus pinaster differenciat... 198 5e-049
gb|BQ634709.1|BQ634709 NXRV072_C12_F NXRV (Nsf Xylem Root w... 198 5e-049
gb|CF663717.1|CF663717 RTCNT1_4_E08.g1_A029 Root control Pi... 196 2e-048
gb|CO163260.1|CO163260 FLD1_40_B01.g1_A029 Root flooded Pin... 196 2e-048
gb|DR050316.1|DR050316 RTBOR1_22_D10.g1_A029 Roots plus add... 196 2e-048
gb|DR117547.1|DR117547 RTMG1_7_D06.g1_A029 Roots minus magn... 196 2e-048
gb|DR385595.1|DR385595 RTHG1_9_D06.g1_A029 Roots plus added... 196 2e-048
gb|DT625022.1|DT625022 EST1159297 Sequencing ESTs from lobl... 196 2e-048
gb|DR081289.1|DR081289 RTFEPL1_28_D04.g1_A029 Roots plus ad... 192 3e-047
gb|AI812944.1|AI812944 22G12 Pine Lambda Zap Xylem library ... 186 2e-045
gb|BQ634195.1|BQ634195 NXRV064_H09_F NXRV (Nsf Xylem Root w... 186 2e-045
gb|DR387015.1|DR387015 RTHG1_18_G07.g1_A029 Roots plus adde... 186 2e-045
gb|BQ634705.1|BQ634705 NXRV072_C08_F NXRV (Nsf Xylem Root w... 182 3e-044
gb|CF395120.1|CF395120 RTDS2_9_A02.g1_A021 Drought-stressed... 182 3e-044
gb|CO367254.1|CO367254 RTK1_33_E04.b1_A029 Roots minus pota... 182 3e-044
gb|DR015317.1|DR015317 STRS1_2_F07.g1_A034 Shoot tip pitch ... 182 3e-044
gb|CO162784.1|CO162784 FLD1_37_B04.g1_A029 Root flooded Pin... 180 1e-043
gb|CF474863.1|CF474863 RTWW2_8_E08.g1_A021 Well-watered lob... 178 5e-043
gb|DN465628.1|DN465628 EST961427 Sequencing ESTs from loblo... 178 5e-043
gb|BF049640.1|BF049640 NXCI_108_D04_F NXCI (Nsf Xylem Compr... 176 2e-042
gb|BF169906.1|BF169906 NXCI_127_H07_F NXCI (Nsf Xylem Compr... 176 2e-042
gb|BM133906.1|BM133906 NXLV_014_A03_F NXLV (Nsf Xylem Late ... 176 2e-042
gb|BQ291272.1|BQ291272 NXRV058_B02_F NXRV (Nsf Xylem Root w... 176 2e-042
gb|BQ291438.1|BQ291438 NXRV059_B03_F NXRV (Nsf Xylem Root w... 176 2e-042
gb|BQ633794.1|BQ633794 NXRV060_G12_F NXRV (Nsf Xylem Root w... 176 2e-042
gb|BQ633798.1|BQ633798 NXRV060_H04_F NXRV (Nsf Xylem Root w... 176 2e-042
gb|BQ633829.1|BQ633829 NXRV061_D03_F NXRV (Nsf Xylem Root w... 176 2e-042
gb|BQ633964.1|BQ633964 NXRV063_A07_F NXRV (Nsf Xylem Root w... 176 2e-042
gb|BQ634246.1|BQ634246 NXRV066_E11_F NXRV (Nsf Xylem Root w... 176 2e-042
gb|BQ634282.1|BQ634282 NXRV067_A02_F NXRV (Nsf Xylem Root w... 176 2e-042
gb|BQ634283.1|BQ634283 NXRV067_A03_F NXRV (Nsf Xylem Root w... 176 2e-042
gb|BQ634365.1|BQ634365 NXRV068_A11_F NXRV (Nsf Xylem Root w... 176 2e-042
gb|BQ634416.1|BQ634416 NXRV068_F08_F NXRV (Nsf Xylem Root w... 176 2e-042
gb|BQ634437.1|BQ634437 NXRV068_H09_F NXRV (Nsf Xylem Root w... 176 2e-042
gb|BQ634579.1|BQ634579 NXRV070_F11_F NXRV (Nsf Xylem Root w... 176 2e-042
gb|BQ634588.1|BQ634588 NXRV070_G09_F NXRV (Nsf Xylem Root w... 176 2e-042
gb|BQ634601.1|BQ634601 NXRV070_H12_F NXRV (Nsf Xylem Root w... 176 2e-042
gb|BQ634688.1|BQ634688 NXRV072_A09_F NXRV (Nsf Xylem Root w... 176 2e-042
gb|BQ634789.1|BQ634789 NXRV073_C04_F NXRV (Nsf Xylem Root w... 176 2e-042
gb|BQ634799.1|BQ634799 NXRV073_D02_F NXRV (Nsf Xylem Root w... 176 2e-042
gb|BQ634819.1|BQ634819 NXRV073_E11_F NXRV (Nsf Xylem Root w... 176 2e-042
gb|BQ634896.1|BQ634896 NXRV074_D12_F NXRV (Nsf Xylem Root w... 176 2e-042
gb|BQ634933.1|BQ634933 NXRV074_H08_F NXRV (Nsf Xylem Root w... 176 2e-042
gb|BQ634991.1|BQ634991 NXRV075_E11_F NXRV (Nsf Xylem Root w... 176 2e-042
gb|CF392059.1|CF392059 RTDR3_12_A05.g1_A022 Loblolly pine r... 176 2e-042
gb|CF396995.1|CF396995 RTDS2_25_B08.g1_A021 Drought-stresse... 176 2e-042
gb|CF397322.1|CF397322 RTDS3_2_C10.g1_A022 Drought-stressed... 176 2e-042
gb|CF475717.1|CF475717 RTWW2_11_F09.g1_A021 Well-watered lo... 176 2e-042
gb|CF479006.1|CF479006 RTWW3_21_C01.g1_A022 Well-watered lo... 176 2e-042
gb|CF666125.1|CF666125 RTCNT1_21_B01.b1_A029 Root control P... 176 2e-042
gb|CF672900.1|CF672900 RTCNT1_74_E08.g1_A029 Root control P... 176 2e-042
gb|CN784059.1|CN784059 EST782750 Sequencing ESTs from loblo... 176 2e-042
gb|CN784669.1|CN784669 EST783360 Sequencing ESTs from loblo... 176 2e-042
gb|CO198476.1|CO198476 GEO1_14_A08.b1_A029 Root gravitropis... 176 2e-042
gb|CO410705.1|CO410705 EST841090 Sequencing ESTs from loblo... 176 2e-042
gb|CO414444.1|CO414444 EST844829 Sequencing ESTs from loblo... 176 2e-042
gb|CO370474.1|CO370474 RTK1_68_D04.b1_A029 Roots minus pota... 176 2e-042
gb|CV135398.1|CV135398 EST846607 Sequencing ESTs from loblo... 176 2e-042
gb|CV135705.1|CV135705 EST846914 Sequencing ESTs from loblo... 176 2e-042
gb|CV136681.1|CV136681 EST847890 Sequencing ESTs from loblo... 176 2e-042
gb|CV139145.1|CV139145 EST850354 Sequencing ESTs from loblo... 176 2e-042
gb|CV143487.1|CV143487 EST854696 Sequencing ESTs from loblo... 176 2e-042
gb|CV143580.1|CV143580 EST854789 Sequencing ESTs from loblo... 176 2e-042
gb|CV144621.1|CV144621 EST855830 Sequencing ESTs from loblo... 176 2e-042
gb|CV145023.1|CV145023 EST856232 Sequencing ESTs from loblo... 176 2e-042
gb|CV146487.1|CV146487 EST857696 Sequencing ESTs from loblo... 176 2e-042
gb|CV146533.1|CV146533 EST857742 Sequencing ESTs from loblo... 176 2e-042
gb|CV146671.1|CV146671 EST857880 Sequencing ESTs from loblo... 176 2e-042
gb|CV147199.1|CV147199 EST858408 Sequencing ESTs from loblo... 176 2e-042
gb|CX648563.1|CX648563 COLD1_29_A11.g1_A029 Root cold Pinus... 176 2e-042
gb|CX650576.1|CX650576 COLD1_46_D07.g1_A029 Root cold Pinus... 176 2e-042
gb|CX715106.1|CX715106 RTPQ1_31_G11.b1_A032 Roots treated w... 176 2e-042
gb|DN450569.1|DN450569 EST946368 Sequencing ESTs from loblo... 176 2e-042
gb|DN450769.1|DN450769 EST946568 Sequencing ESTs from loblo... 176 2e-042
gb|DN451693.1|DN451693 EST947492 Sequencing ESTs from loblo... 176 2e-042
gb|DN451745.1|DN451745 EST947544 Sequencing ESTs from loblo... 176 2e-042
gb|DN453264.1|DN453264 EST949063 Sequencing ESTs from loblo... 176 2e-042
gb|DN453422.1|DN453422 EST949221 Sequencing ESTs from loblo... 176 2e-042
gb|DN456821.1|DN456821 EST952620 Sequencing ESTs from loblo... 176 2e-042
gb|DN457387.1|DN457387 EST953186 Sequencing ESTs from loblo... 176 2e-042
gb|DN457452.1|DN457452 EST953251 Sequencing ESTs from loblo... 176 2e-042
gb|DN458978.1|DN458978 EST954777 Sequencing ESTs from loblo... 176 2e-042
gb|DN460159.1|DN460159 EST955958 Sequencing ESTs from loblo... 176 2e-042
gb|DN460354.1|DN460354 EST956153 Sequencing ESTs from loblo... 176 2e-042
gb|DN460975.1|DN460975 EST956774 Sequencing ESTs from loblo... 176 2e-042
gb|DN462130.1|DN462130 EST957929 Sequencing ESTs from loblo... 176 2e-042
gb|DN462378.1|DN462378 EST958177 Sequencing ESTs from loblo... 176 2e-042
gb|DN465607.1|DN465607 EST961406 Sequencing ESTs from loblo... 176 2e-042
gb|DR019503.1|DR019503 STRS1_30_B02.g1_A034 Shoot tip pitch... 176 2e-042
gb|DR048278.1|DR048278 RTBOR1_7_E06.g2_A029 Roots plus adde... 176 2e-042
gb|DR060402.1|DR060402 RTNIT1_27_C12.g1_A029 Roots minus ni... 176 2e-042
gb|DR088954.1|DR088954 RTAL1_5_E05.g1_A029 Roots plus added... 176 2e-042
gb|DR165415.1|DR165415 RTPHOS1_4_H11.g1_A029 Roots minus ph... 176 2e-042
gb|DR181434.1|DR181434 RTMNUT1_38_H12.g2_A029 Roots minus m... 176 2e-042
gb|DR742221.1|DR742221 RTCU1_2_C09.g1_A029 Roots plus added... 176 2e-042
gb|DT627448.1|DT627448 EST1160524 Sequencing ESTs from lobl... 176 2e-042
gb|BQ634840.1|BQ634840 NXRV073_G10_F NXRV (Nsf Xylem Root w... 172 3e-041
gb|BX251009.1|BX251009 BX251009 Pinus pinaster differenciat... 170 1e-040
gb|BQ634699.1|BQ634699 NXRV072_C01_F NXRV (Nsf Xylem Root w... 170 1e-040
gb|DR089689.1|DR089689 RTAL1_10_E12.b1_A029 Roots plus adde... 170 1e-040
gb|BQ634010.1|BQ634010 NXRV063_F10_F NXRV (Nsf Xylem Root w... 168 5e-040
gb|CO170879.1|CO170879 NDL1_17_C09.g1_A029 Needles control ... 168 5e-040
gb|CO370412.1|CO370412 RTK1_67_E10.g1_A029 Roots minus pota... 168 5e-040
gb|DR015725.1|DR015725 STRS1_5_F07.b1_A034 Shoot tip pitch ... 168 5e-040
gb|DR023615.1|DR023615 STRS1_58_H07.g1_A034 Shoot tip pitch... 168 5e-040
gb|BQ291314.1|BQ291314 NXRV058_F01_F NXRV (Nsf Xylem Root w... 167 2e-039
gb|BQ634021.1|BQ634021 NXRV063_G10_F NXRV (Nsf Xylem Root w... 167 2e-039
gb|CV036226.1|CV036226 RTNACL1_57_D06.g1_A029 Roots plus ad... 167 2e-039
gb|BQ634723.1|BQ634723 NXRV072_E04_F NXRV (Nsf Xylem Root w... 165 7e-039
gb|DR024290.1|DR024290 STRS1_63_G12.g1_A034 Shoot tip pitch... 165 7e-039
gb|BQ634581.1|BQ634581 NXRV070_G02_F NXRV (Nsf Xylem Root w... 163 3e-038
gb|CV138640.1|CV138640 EST849849 Sequencing ESTs from loblo... 163 3e-038
gb|DN454358.1|DN454358 EST950157 Sequencing ESTs from loblo... 163 3e-038
gb|DN461170.1|DN461170 EST956969 Sequencing ESTs from loblo... 163 3e-038
gb|CF395706.1|CF395706 RTDS2_16_F06.g1_A021 Drought-stresse... 155 7e-036
gb|CF664627.1|CF664627 RTCNT1_11_B06.b1_A029 Root control P... 155 7e-036
gb|BQ633946.1|BQ633946 NXRV062_G08_F NXRV (Nsf Xylem Root w... 153 3e-035
gb|CF665508.1|CF665508 RTCNT1_16_A06.g1_A029 Root control P... 153 3e-035
gb|BQ634048.1|BQ634048 NXRV065_B03_F NXRV (Nsf Xylem Root w... 151 1e-034
gb|BQ634505.1|BQ634505 NXRV069_G06_F NXRV (Nsf Xylem Root w... 151 1e-034
gb|BX682912.1|BX682912 BX682912 Pinus pinaster differenciat... 141 1e-031
gb|DR019436.1|DR019436 STRS1_30_B05.b1_A034 Shoot tip pitch... 141 1e-031
gb|BQ634611.1|BQ634611 NXRV071_A12_F NXRV (Nsf Xylem Root w... 137 2e-030
gb|BQ634425.1|BQ634425 NXRV068_G05_F NXRV (Nsf Xylem Root w... 135 7e-030
gb|DR015133.1|DR015133 STRS1_1_E06.g1_A034 Shoot tip pitch ... 135 7e-030
gb|DR095954.1|DR095954 STRR1_24_F04.g1_A033 Stem Response R... 135 7e-030
gb|DR165772.1|DR165772 RTPHOS1_7_F02.b1_A029 Roots minus ph... 135 7e-030
gb|CF479371.1|CF479371 RTWW3_23_G07.g1_A022 Well-watered lo... 131 1e-028
gb|BQ634373.1|BQ634373 NXRV068_B07_F NXRV (Nsf Xylem Root w... 129 4e-028
gb|CF396141.1|CF396141 RTDS2_13_C12.g1_A021 Drought-stresse... 129 4e-028
gb|CO163180.1|CO163180 FLD1_40_B01.b1_A029 Root flooded Pin... 129 4e-028
gb|CO198700.1|CO198700 GEO1_15_G10.g1_A029 Root gravitropis... 129 4e-028
gb|CV036619.1|CV036619 RTNACL1_60_B12.g1_A029 Roots plus ad... 129 4e-028
gb|DR117464.1|DR117464 RTMG1_7_D06.b1_A029 Roots minus magn... 129 4e-028
gb|CO162703.1|CO162703 FLD1_37_B04.b1_A029 Root flooded Pin... 125 6e-027
gb|CO167214.1|CO167214 FLD1_67_D01.g1_A029 Root flooded Pin... 125 6e-027
gb|CV036552.1|CV036552 RTNACL1_60_B12.b1_A029 Roots plus ad... 125 6e-027
gb|DR119157.1|DR119157 RTMG1_21_C02.g1_A029 Roots minus mag... 125 6e-027
gb|BQ633865.1|BQ633865 NXRV061_G10_F NXRV (Nsf Xylem Root w... 123 3e-026
gb|BQ634164.1|BQ634164 NXRV064_E09_F NXRV (Nsf Xylem Root w... 123 3e-026
gb|DR022357.1|DR022357 STRS1_50_B12.g1_A034 Shoot tip pitch... 123 3e-026
gb|DR744291.1|DR744291 RTCU1_21_B02.g1_A029 Roots plus adde... 121 1e-025
gb|CO365340.1|CO365340 RTK1_25_C10.b1_A029 Roots minus pota... 119 4e-025
gb|DR050236.1|DR050236 RTBOR1_22_D10.b1_A029 Roots plus add... 119 4e-025
gb|BQ634047.1|BQ634047 NXRV065_B02_F NXRV (Nsf Xylem Root w... 113 2e-023
gb|CO198912.1|CO198912 GEO1_17_A08.g1_A029 Root gravitropis... 111 1e-022
gb|CO370312.1|CO370312 RTK1_67_C05.b1_A029 Roots minus pota... 107 2e-021
gb|DR092693.1|DR092693 STRR1_3_E02.b1_A033 Stem Response Re... 100 4e-019
gb|DR094847.1|DR094847 STRR1_17_D09.b1_A033 Stem Response R... 100 4e-019
gb|BQ634157.1|BQ634157 NXRV064_D12_F NXRV (Nsf Xylem Root w... 96 6e-018
gb|DR090601.1|DR090601 RTAL1_16_E05.b1_A029 Roots plus adde... 94 2e-017
gb|DR745200.1|DR745200 RTCU1_27_E11.g1_A029 Roots plus adde... 94 2e-017
gb|BX253436.1|BX253436 BX253436 Pinus pinaster differenciat... 92 9e-017
gb|BQ291474.1|BQ291474 NXRV059_E10_F NXRV (Nsf Xylem Root w... 92 9e-017
gb|CF391955.1|CF391955 RTDR3_12_A05.b1_A022 Loblolly pine r... 92 9e-017
gb|CF393123.1|CF393123 RTDR3_17_F03.b1_A022 Loblolly pine r... 92 9e-017
gb|CF393207.1|CF393207 RTDR3_17_A05.g1_A022 Loblolly pine r... 92 9e-017
gb|CF663638.1|CF663638 RTCNT1_4_E08.b1_A029 Root control Pi... 92 9e-017
gb|CF664953.1|CF664953 RTCNT1_13_A06.b1_A029 Root control P... 92 9e-017
gb|CF667646.1|CF667646 RTCNT1_31_D11.g1_A029 Root control P... 92 9e-017
gb|CF672828.1|CF672828 RTCNT1_74_E08.b1_A029 Root control P... 92 9e-017
gb|BX682783.1|BX682783 BX682783 Pinus pinaster differenciat... 92 9e-017
gb|CO164789.1|CO164789 FLD1_50_G08.b1_A029 Root flooded Pin... 92 9e-017
gb|CO174346.1|CO174346 NDL1_43_A11.g1_A029 Needles control ... 92 9e-017
gb|CO198151.1|CO198151 GEO1_11_D06.g1_A029 Root gravitropis... 92 9e-017
gb|CO198640.1|CO198640 GEO1_15_G10.b1_A029 Root gravitropis... 92 9e-017
gb|CO198839.1|CO198839 GEO1_17_A08.b1_A029 Root gravitropis... 92 9e-017
gb|CO369566.1|CO369566 RTK1_48_C03.b1_A029 Roots minus pota... 92 9e-017
gb|CO370549.1|CO370549 RTK1_68_D04.g1_A029 Roots minus pota... 92 9e-017
gb|CX648487.1|CX648487 COLD1_29_A11.b1_A029 Root cold Pinus... 92 9e-017
gb|CX651399.1|CX651399 COLD1_52_D06.b1_A029 Root cold Pinus... 92 9e-017
gb|DR015930.1|DR015930 STRS1_6_C10.g1_A034 Shoot tip pitch ... 92 9e-017
gb|DR019434.1|DR019434 STRS1_30_B02.b1_A034 Shoot tip pitch... 92 9e-017
gb|DR023542.1|DR023542 STRS1_58_H07.b1_A034 Shoot tip pitch... 92 9e-017
gb|DR049913.1|DR049913 RTBOR1_20_A01.b1_A029 Roots plus add... 92 9e-017
gb|DR049974.1|DR049974 RTBOR1_20_A01.g1_A029 Roots plus add... 92 9e-017
gb|DR055669.1|DR055669 RTCA1_25_D10.b1_A029 Roots minus cal... 92 9e-017
gb|DR072378.1|DR072378 RTDK1_26_A04.b1_A029 Roots, dark Pin... 92 9e-017
gb|DR089774.1|DR089774 RTAL1_10_E12.g1_A029 Roots plus adde... 92 9e-017
gb|DR092259.1|DR092259 RTAL1_28_A09.b1_A029 Roots plus adde... 92 9e-017
gb|DR095718.1|DR095718 STRR1_23_D08.b1_A033 Stem Response R... 92 9e-017
gb|DR100799.1|DR100799 STRR1_68_D06.b1_A033 Stem Response R... 92 9e-017
gb|DR101356.1|DR101356 STRR1_72_G11.b1_A033 Stem Response R... 92 9e-017
gb|DR102518.1|DR102518 STRR1_81_E08.g1_A033 Stem Response R... 92 9e-017
gb|DR112407.1|DR112407 RTS1_28_B05.b1_A029 Roots minus sulf... 92 9e-017
gb|DR181355.1|DR181355 RTMNUT1_38_H12.b2_A029 Roots minus m... 92 9e-017
gb|DR385328.1|DR385328 RTHG1_8_B04.b1_A029 Roots plus added... 92 9e-017
gb|DR385514.1|DR385514 RTHG1_9_D06.b1_A029 Roots plus added... 92 9e-017
gb|DR386120.1|DR386120 RTHG1_13_C06.b1_A029 Roots plus adde... 92 9e-017
gb|DR386200.1|DR386200 RTHG1_13_C06.g1_A029 Roots plus adde... 92 9e-017
gb|DR742109.1|DR742109 RTCU1_1_F12.g1_A029 Roots plus added... 92 9e-017
gb|DR742910.1|DR742910 RTCU1_7_F11.g2_A029 Roots plus added... 92 9e-017
gb|DR742100.1|DR742100 RTCU1_1_E12.g1_A029 Roots plus added... 90 4e-016
gb|BQ634392.1|BQ634392 NXRV068_D05_F NXRV (Nsf Xylem Root w... 88 1e-015
gb|DR015050.1|DR015050 STRS1_1_E06.b1_A034 Shoot tip pitch ... 86 6e-015
gb|BX249096.1|BX249096 BX249096 Pinus pinaster differenciat... 84 2e-014
gb|BQ196885.1|BQ196885 NXLV106_E09_F NXLV (Nsf Xylem Late w... 84 2e-014
gb|BQ196977.1|BQ196977 NXLV107_G10_F NXLV (Nsf Xylem Late w... 84 2e-014
gb|CF390989.1|CF390989 RTDR3_3_H05.b1_A022 Loblolly pine ro... 84 2e-014
gb|CF391457.1|CF391457 RTDR3_9_F08.b1_A022 Loblolly pine ro... 84 2e-014
gb|CF391568.1|CF391568 RTDR3_9_F08.g1_A022 Loblolly pine ro... 84 2e-014
gb|CF394977.1|CF394977 RTDS2_8_B01.g1_A021 Drought-stressed... 84 2e-014
gb|CF396949.1|CF396949 RTDS2_25_B08.b1_A021 Drought-stresse... 84 2e-014
gb|CF474827.1|CF474827 RTWW2_8_E08.b1_A021 Well-watered lob... 84 2e-014
gb|CF475433.1|CF475433 RTWW2_12_G08.b1_A021 Well-watered lo... 84 2e-014
gb|CF475582.1|CF475582 RTWW2_11_F09.b1_A021 Well-watered lo... 84 2e-014
gb|CF478918.1|CF478918 RTWW3_21_A01.b1_A022 Well-watered lo... 84 2e-014
gb|CF479261.1|CF479261 RTWW3_23_G07.b1_A022 Well-watered lo... 84 2e-014
gb|CO160100.1|CO160100 FLD1_18_H03.b1_A029 Root flooded Pin... 84 2e-014
gb|CO170812.1|CO170812 NDL1_17_C09.b1_A029 Needles control ... 84 2e-014
gb|CO370335.1|CO370335 RTK1_67_E10.b1_A029 Roots minus pota... 84 2e-014
gb|CX650502.1|CX650502 COLD1_46_D07.b1_A029 Root cold Pinus... 84 2e-014
gb|DR018960.1|DR018960 STRS1_27_A10.b1_A034 Shoot tip pitch... 84 2e-014
gb|DR018971.1|DR018971 STRS1_27_B10.b1_A034 Shoot tip pitch... 84 2e-014
gb|DR019324.1|DR019324 STRS1_29_F01.b1_A034 Shoot tip pitch... 84 2e-014
gb|DR019506.1|DR019506 STRS1_30_B05.g1_A034 Shoot tip pitch... 84 2e-014
gb|DR022286.1|DR022286 STRS1_50_B12.b1_A034 Shoot tip pitch... 84 2e-014
gb|DR049795.1|DR049795 RTBOR1_19_D05.b1_A029 Roots plus add... 84 2e-014
gb|DR054087.1|DR054087 RTCA1_15_D12.b1_A029 Roots minus cal... 84 2e-014
gb|DR054171.1|DR054171 RTCA1_15_D12.g1_A029 Roots minus cal... 84 2e-014
gb|DR054424.1|DR054424 RTCA1_17_F04.b1_A029 Roots minus cal... 84 2e-014
gb|DR058806.1|DR058806 RTNIT1_14_B03.b1_A029 Roots minus ni... 84 2e-014
gb|DR060319.1|DR060319 RTNIT1_27_C12.b1_A029 Roots minus ni... 84 2e-014
gb|DR060584.1|DR060584 RTNIT1_28_F03.g1_A029 Roots minus ni... 84 2e-014
gb|DR099736.1|DR099736 STRR1_58_D07.b1_A033 Stem Response R... 84 2e-014
gb|DR386162.1|DR386162 RTHG1_13_G10.b1_A029 Roots plus adde... 84 2e-014
gb|DR388036.1|DR388036 RTHG1_25_F08.g1_A029 Roots plus adde... 84 2e-014
gb|BQ106776.1|BQ106776 NXLV089_C10_F NXLV (Nsf Xylem Late w... 82 9e-014
gb|BQ291465.1|BQ291465 NXRV059_D11_F NXRV (Nsf Xylem Root w... 82 9e-014
gb|DR018826.1|DR018826 STRS1_26_A10.b2_A034 Shoot tip pitch... 82 9e-014
gb|BG040865.1|BG040865 NXSI_116_A11_F NXSI (Nsf Xylem Side ... 80 3e-013
gb|CF391125.1|CF391125 RTDR3_4_H08.b1_A022 Loblolly pine ro... 80 3e-013
gb|CF391267.1|CF391267 RTDR3_4_H08.g1_A022 Loblolly pine ro... 80 3e-013
gb|CF665425.1|CF665425 RTCNT1_16_A06.b1_A029 Root control P... 80 3e-013
gb|CF668455.1|CF668455 RTCNT1_36_C10.g1_A029 Root control P... 80 3e-013
gb|DR072460.1|DR072460 RTDK1_26_A04.g1_A029 Roots, dark Pin... 80 3e-013
gb|DR095881.1|DR095881 STRR1_24_F04.b1_A033 Stem Response R... 80 3e-013
gb|DR100832.1|DR100832 STRR1_68_D06.g1_A033 Stem Response R... 80 3e-013
gb|DR109772.1|DR109772 RTS1_4_E10.g1_A029 Roots minus sulfu... 80 3e-013
gb|AA556353.1|AA556353 208 Loblolly pine C Pinus taeda cDNA... 76 5e-012
gb|BM367365.1|BM367365 NXLV_048_C05_F NXLV (Nsf Xylem Late ... 76 5e-012
gb|DR109585.1|DR109585 RTS1_3_F11.b1_A029 Roots minus sulfu... 76 5e-012
gb|BQ290867.1|BQ290867 NXRV050_F06_F NXRV (Nsf Xylem Root w... 74 2e-011
gb|BQ635001.1|BQ635001 NXRV075_F12_F NXRV (Nsf Xylem Root w... 74 2e-011
gb|DR090676.1|DR090676 RTAL1_16_E05.g1_A029 Roots plus adde... 74 2e-011
gb|DR092747.1|DR092747 STRR1_3_E02.g1_A033 Stem Response Re... 74 2e-011
gb|DR102019.1|DR102019 STRR1_77_C01.g1_A033 Stem Response R... 74 2e-011
gb|DR742023.1|DR742023 RTCU1_1_E12.b1_A029 Roots plus added... 74 2e-011
gb|DR745129.1|DR745129 RTCU1_27_E11.b1_A029 Roots plus adde... 74 2e-011
gb|CF665029.1|CF665029 RTCNT1_13_A06.g1_A029 Root control P... 72 8e-011
gb|CO369362.1|CO369362 RTK1_46_D01.g1_A029 Roots minus pota... 72 8e-011
gb|DR088873.1|DR088873 RTAL1_5_E05.b1_A029 Roots plus added... 72 8e-011
gb|DR742032.1|DR742032 RTCU1_1_F12.b1_A029 Roots plus added... 72 8e-011
gb|AA740032.1|AA740032 797 PtIFG2 Pinus taeda cDNA clone 92... 70 3e-010
gb|BQ634608.1|BQ634608 NXRV071_A08_F NXRV (Nsf Xylem Root w... 70 3e-010
gb|DR109721.1|DR109721 RTS1_4_E10.b1_A029 Roots minus sulfu... 70 3e-010
gb|BX249873.1|BX249873 BX249873 Pinus pinaster differenciat... 68 1e-009
gb|CF396120.1|CF396120 RTDS2_13_H06.g1_A021 Drought-stresse... 68 1e-009
gb|CF473083.1|CF473083 RTDS1_1_G06.g1_A015 Drought-stressed... 68 1e-009
gb|CF475563.1|CF475563 RTWW2_12_G08.g1_A021 Well-watered lo... 68 1e-009
gb|CF473029.1|CF473029 RTDS1_1_G06.b1_A015 Drought-stressed... 66 5e-009
gb|CF667418.1|CF667418 RTCNT1_30_D03.b1_A029 Root control P... 66 5e-009
gb|CF667489.1|CF667489 RTCNT1_30_D03.g1_A029 Root control P... 66 5e-009
gb|CO369280.1|CO369280 RTK1_46_D01.b1_A029 Roots minus pota... 66 5e-009
gb|BF517646.1|BF517646 NXSI_028_C04_F NXSI (Nsf Xylem Side ... 64 2e-008
gb|BQ634922.1|BQ634922 NXRV074_G08_F NXRV (Nsf Xylem Root w... 64 2e-008
gb|BF518192.1|BF518192 NXSI_036_B11_F NXSI (Nsf Xylem Side ... 62 8e-008
gb|BM493762.1|BM493762 NXLV_067_C01_F NXLV (Nsf Xylem Late ... 62 8e-008
gb|BM903034.1|BM903034 NXLV_078_D07_F NXLV (Nsf Xylem Late ... 62 8e-008
gb|BX255255.1|BX255255 BX255255 Pinus pinaster differenciat... 58 1e-006
gb|BF778720.1|BF778720 NXSI_086_C06_F NXSI (Nsf Xylem Side ... 54 2e-005
gb|BQ634898.1|BQ634898 NXRV074_E02_F NXRV (Nsf Xylem Root w... 54 2e-005
gb|CF393948.1|CF393948 RTDS2_2_E04.b1_A021 Drought-stressed... 54 2e-005
gb|CF395036.1|CF395036 RTDS2_9_A02.b1_A021 Drought-stressed... 54 2e-005
gb|CF397218.1|CF397218 RTDS3_2_C10.b2_A022 Drought-stressed... 54 2e-005
gb|DR112763.1|DR112763 RTS1_30_A05.g1_A029 Roots minus sulf... 54 2e-005
gb|BX677794.1|BX677794 BX677794 RN Pinus pinaster cDNA clon... 52 8e-005
gb|CO363287.1|CO363287 RTK1_8_F11.g1_A029 Roots minus potas... 52 8e-005
gb|BQ290718.1|BQ290718 NXRV048_G03_F NXRV (Nsf Xylem Root w... 48 0.001
gb|BQ106864.1|BQ106864 NXLV082_C10_F NXLV (Nsf Xylem Late w... 44 0.019
gb|CR392211.1|CR392211 CR392211 RN Pinus pinaster cDNA clon... 44 0.019
gb|DN629979.1|DN629979 EST980795 Subtracted pine embryo lib... 44 0.019
gb|DR163073.1|DR163073 RTFE1_24_B05.g1_A029 Roots minus iro... 44 0.019
gb|DT630192.1|DT630192 EST1154604 Subtracted pine embryo li... 44 0.019
gb|BM903372.1|BM903372 NXRV_040_A02_F NXRV (Nsf Xylem Root ... 40 0.30
>gb|BX784188.1|BX784188 BX784188 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 130D05 similar to ADP,ATP carrier protein,
mRNA sequence
Length = 475
Score = 214 bits (108), Expect = 9e-054
Identities = 296/359 (82%)
Strand = Plus / Minus
Query: 813 ccacgataaacaataattccaacacaagatatgttaaatccacggtaaagcccagcaata 872
|||||||| || |||||||| |||||||| ||||| || ||||| || || ||||||||
Sbjct: 385 ccacgatagactataattcccacacaagaaatgttgaacccacgatagagaccagcaatt 326
Query: 873 ccatcagatttgagtgtcttgcggtagacatccacaagaccattgaattgtctatcgcct 932
||||||||||| | ||| || ||||||||| | ||| ||||| ||||| || || |||
Sbjct: 325 ccatcagatttcaatgttttctngtagacatcaataagcccattaaattgcctctcccct 266
Query: 933 cctcccttggcagccttggcatcattggccaaccttgtcctcgcataatccagggagtac 992
|| ||| ||||||||| ||||||||||| || || | ||||| |||| || ||
Sbjct: 265 cccttctttgcagccttgttatcattggccagccgagttcgagcatagtccaaagaataa 206
Query: 993 acaaaaaacaaagaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccac 1052
||||||| | ||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 205 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 146
Query: 1053 ttccagtaaccatccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaac 1112
|||||||||||||||||||| |||||||| || || || ||||| ||||| ||||| |||
Sbjct: 145 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 86
Query: 1113 gcaaagttcaaagcctgagtagggaagtaacgaataacattagcagtgttacccctcca 1171
|||||||||||||||||||| || || ||||| |||||||| |||||||| || |||||
Sbjct: 85 gcaaagttcaaagcctgagtgggaaaataacggataacatttgcagtgtttcctctcca 27
>gb|BQ634287.1|BQ634287 NXRV067_A07_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV067_A07 5' similar to Arabidopsis thaliana
sequence At5g13490 adenosine nucleotide translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 800
Score = 204 bits (103), Expect = 9e-051
Identities = 294/359 (81%)
Strand = Plus / Minus
Query: 813 ccacgataaacaataattccaacacaagatatgttaaatccacggtaaagcccagcaata 872
|||||||| || |||||||| |||||||| ||||| || ||||| || || ||||||||
Sbjct: 692 ccacgatagactataattcccacacaagaaatgttgaacccacgatagagaccagcaatt 633
Query: 873 ccatcagatttgagtgtcttgcggtagacatccacaagaccattgaattgtctatcgcct 932
||||||| ||| | ||| || ||||||||| ||||| ||||| ||||| || || |||
Sbjct: 632 ccatcagttttcaatgttttcttgtagacatcaacaagcccattaaattgcctctcccct 573
Query: 933 cctcccttggcagccttggcatcattggccaaccttgtcctcgcataatccagggagtac 992
| ||| ||||||||| |||||| |||| || || | ||||| |||| || ||
Sbjct: 572 cnnnnctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataa 513
Query: 993 acaaaaaacaaagaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccac 1052
||||||| | ||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 512 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 453
Query: 1053 ttccagtaaccatccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaac 1112
|||||||||||||||||||| |||||||| || || || ||||| ||||| ||||| |||
Sbjct: 452 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 393
Query: 1113 gcaaagttcaaagcctgagtagggaagtaacgaataacattagcagtgttacccctcca 1171
|||||||||||||||||||| || || ||||| |||||||| |||||||| || |||||
Sbjct: 392 gcaaagttcaaagcctgagtgggaaaataacggataacatttgcagtgtttcctctcca 334
>gb|CF394023.1|CF394023 RTDS2_2_E04.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_2_E04_A021 5', mRNA sequence
Length = 724
Score = 204 bits (103), Expect = 9e-051
Identities = 295/359 (82%)
Strand = Plus / Minus
Query: 813 ccacgataaacaataattccaacacaagatatgttaaatccacggtaaagcccagcaata 872
|||||||| || |||||||| |||||||| ||||| || ||||| || || ||||||||
Sbjct: 687 ccacgatagaccataattcccacacaagaaatgttgaacccacgatagagaccagcaatt 628
Query: 873 ccatcagatttgagtgtcttgcggtagacatccacaagaccattgaattgtctatcgcct 932
||||||| ||| | ||| || ||||||||| ||||| ||||| ||||| || || |||
Sbjct: 627 ccatcagttttcaatgttttcttgtagacatcaacaagcccattaaattgcctctcccct 568
Query: 933 cctcccttggcagccttggcatcattggccaaccttgtcctcgcataatccagggagtac 992
|| ||| ||||||||| |||||| |||| || || | ||||| |||| || ||
Sbjct: 567 cccttctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataa 508
Query: 993 acaaaaaacaaagaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccac 1052
||||||| | ||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 507 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 448
Query: 1053 ttccagtaaccatccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaac 1112
|||||||||||||||||||| |||||||| || || || ||||| ||||| ||||| |||
Sbjct: 447 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 388
Query: 1113 gcaaagttcaaagcctgagtagggaagtaacgaataacattagcagtgttacccctcca 1171
|||||||||||||||||||| || || ||||| |||||||| |||||||| || |||||
Sbjct: 387 gcaaagttcaaagcctgagtgggaaaataacggataacatttgcagtgtttcctctcca 329
>gb|CO164871.1|CO164871 FLD1_50_G08.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_50_G08_A029 5', mRNA sequence
Length = 839
Score = 204 bits (103), Expect = 9e-051
Identities = 295/359 (82%)
Strand = Plus / Minus
Query: 813 ccacgataaacaataattccaacacaagatatgttaaatccacggtaaagcccagcaata 872
|||||||| || |||||||| |||||||| ||||| || ||||| || || ||||||||
Sbjct: 419 ccacgatagactataattcccacacaagaaatgttgaacccacgatagagaccagcaatt 360
Query: 873 ccatcagatttgagtgtcttgcggtagacatccacaagaccattgaattgtctatcgcct 932
||||||| ||| | ||| || ||||||||| ||||| ||||| ||||| || || |||
Sbjct: 359 ccatcagttttcaatgttttcttgtagacatcaacaagcccattaaattgcctctcccct 300
Query: 933 cctcccttggcagccttggcatcattggccaaccttgtcctcgcataatccagggagtac 992
|| ||| ||||||||| |||||| |||| || || | ||||| |||| || ||
Sbjct: 299 cccttctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataa 240
Query: 993 acaaaaaacaaagaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccac 1052
||||||| | ||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 239 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 180
Query: 1053 ttccagtaaccatccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaac 1112
|||||||||||||||||||| |||||||| || || || ||||| ||||| ||||| |||
Sbjct: 179 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 120
Query: 1113 gcaaagttcaaagcctgagtagggaagtaacgaataacattagcagtgttacccctcca 1171
|||||||||||||||||||| || || ||||| |||||||| |||||||| || |||||
Sbjct: 119 gcaaagttcaaagcctgagtgggaaaataacggataacatttgcagtgtttcctctcca 61
Score = 91.7 bits (46), Expect = 9e-017
Identities = 151/186 (81%)
Strand = Plus / Minus
Query: 524 cacaccagcgccagcaatggcacgaagaatgttagcaccagcacccttgaacagggactt 583
||||||||| || ||||| ||||| || || || ||||| ||||||||||| || |||||
Sbjct: 708 cacaccagccccggcaatagcacggaggatatttgcacctgcacccttgaagagtgactt 649
Query: 584 ggggccttccttcttaaggatctgctggaatgcgtccaatgagctcttgtacttgacagc 643
|| ||||| || | | ||||| | ||||| ||||| || || |||||||| || ||
Sbjct: 648 ggcaccttcattttggacaatctgtttaaatgcatccaacgaacttttgtacttaactgc 589
Query: 644 ctcaccagaagtcatcatcatccttctgcggacagtatcaatggggtaagatgcaagacc 703
|||||| |||||||||||||| ||||| || |||||||| || || || |||||||||||
Sbjct: 588 ctcaccggaagtcatcatcattcttcttcgtacagtatctataggatacgatgcaagacc 529
Query: 704 agcacc 709
||||||
Sbjct: 528 agcacc 523
>gb|CO167141.1|CO167141 FLD1_67_D01.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_67_D01_A029 3', mRNA sequence
Length = 872
Score = 204 bits (103), Expect = 9e-051
Identities = 295/359 (82%)
Strand = Plus / Minus
Query: 813 ccacgataaacaataattccaacacaagatatgttaaatccacggtaaagcccagcaata 872
|||||||| || |||||||| |||||||| ||||| || ||||| || || ||||||||
Sbjct: 627 ccacgatagactataattcccacacaagaaatgttgaacccacgatagagaccagcaatt 568
Query: 873 ccatcagatttgagtgtcttgcggtagacatccacaagaccattgaattgtctatcgcct 932
||||||| ||| | ||| || ||||||||| ||||| ||||| ||||| || || |||
Sbjct: 567 ccatcagttttcaatgttttcttgtagacatcaacaagcccattaaattgcctctcccct 508
Query: 933 cctcccttggcagccttggcatcattggccaaccttgtcctcgcataatccagggagtac 992
|| ||| ||||||||| |||||| |||| || || | ||||| |||| || ||
Sbjct: 507 cccttctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataa 448
Query: 993 acaaaaaacaaagaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccac 1052
||||||| | ||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 447 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 388
Query: 1053 ttccagtaaccatccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaac 1112
|||||||||||||||||||| |||||||| || || || ||||| ||||| ||||| |||
Sbjct: 387 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 328
Query: 1113 gcaaagttcaaagcctgagtagggaagtaacgaataacattagcagtgttacccctcca 1171
|||||||||||||||||||| || || ||||| |||||||| |||||||| || |||||
Sbjct: 327 gcaaagttcaaagcctgagtgggaaaataacggataacatttgcagtgtttcctctcca 269
Score = 83.8 bits (42), Expect = 2e-014
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 612 aatgcgtccaatgagctcttgtacttgacagcctcaccagaagtcatcatcatccttctg 671
||||| ||||| || || |||||||| || |||||||| |||||||||||||| |||||
Sbjct: 828 aatgcatccaacgaacttttgtacttaactgcctcaccggaagtcatcatcattcttctt 769
Query: 672 cggacagtatcaatggggtaagatgcaagaccagcacc 709
|| |||||||| || || || |||||||||||||||||
Sbjct: 768 cgtacagtatctataggatacgatgcaagaccagcacc 731
>gb|DR019041.1|DR019041 STRS1_27_A10.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_27_A10_A034 5', mRNA sequence
Length = 852
Score = 204 bits (103), Expect = 9e-051
Identities = 295/359 (82%)
Strand = Plus / Minus
Query: 813 ccacgataaacaataattccaacacaagatatgttaaatccacggtaaagcccagcaata 872
|||||||| || |||||||| |||||||| ||||| || ||||| || || ||||||||
Sbjct: 554 ccacgatagactataattcccacacaagaaatgttgaacccacgatagagaccagcaatt 495
Query: 873 ccatcagatttgagtgtcttgcggtagacatccacaagaccattgaattgtctatcgcct 932
||||||| ||| | ||| || ||||||||| ||||| ||||| ||||| || || |||
Sbjct: 494 ccatcagttttcaatgttttcttgtagacatcaacaagcccattaaattgcctctcccct 435
Query: 933 cctcccttggcagccttggcatcattggccaaccttgtcctcgcataatccagggagtac 992
|| ||| ||||||||| |||||| |||| || || | ||||| |||| || ||
Sbjct: 434 cccttctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataa 375
Query: 993 acaaaaaacaaagaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccac 1052
||||||| | ||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 374 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 315
Query: 1053 ttccagtaaccatccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaac 1112
|||||||||||||||||||| |||||||| || || || ||||| ||||| ||||| |||
Sbjct: 314 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 255
Query: 1113 gcaaagttcaaagcctgagtagggaagtaacgaataacattagcagtgttacccctcca 1171
|||||||||||||||||||| || || ||||| |||||||| |||||||| || |||||
Sbjct: 254 gcaaagttcaaagcctgagtgggaaaataacggataacatttgcagtgtttcctctcca 196
Score = 83.8 bits (42), Expect = 2e-014
Identities = 150/186 (80%)
Strand = Plus / Minus
Query: 524 cacaccagcgccagcaatggcacgaagaatgttagcaccagcacccttgaacagggactt 583
||||||||| || ||||| ||||| || || || ||||| ||||||||||| || |||||
Sbjct: 843 cacaccagccccggcaatagcacggaggatatttgcacctgcacccttgaagagtgactt 784
Query: 584 ggggccttccttcttaaggatctgctggaatgcgtccaatgagctcttgtacttgacagc 643
|| ||||| || | | ||||| | ||||| ||||| || || |||||||| || ||
Sbjct: 783 ggcaccttcattttggacaatctgtttaaatgcatccaacgaacttttgtacttaactgc 724
Query: 644 ctcaccagaagtcatcatcatccttctgcggacagtatcaatggggtaagatgcaagacc 703
||||| |||||||||||||| ||||| || |||||||| || || || |||||||||||
Sbjct: 723 ttcaccggaagtcatcatcattcttcttcgtacagtatctataggatacgatgcaagacc 664
Query: 704 agcacc 709
||||||
Sbjct: 663 agcacc 658
>gb|DR055331.1|DR055331 RTCA1_23_B04.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_23_B04_A029 3', mRNA sequence
Length = 812
Score = 204 bits (103), Expect = 9e-051
Identities = 295/359 (82%)
Strand = Plus / Plus
Query: 813 ccacgataaacaataattccaacacaagatatgttaaatccacggtaaagcccagcaata 872
|||||||| || |||||||| |||||||| ||||| || ||||| || || ||||||||
Sbjct: 347 ccacgatagactataattcccacacaagaaatgttgaacccacgatagagaccagcaatt 406
Query: 873 ccatcagatttgagtgtcttgcggtagacatccacaagaccattgaattgtctatcgcct 932
||||||| ||| | ||| || ||||||||| ||||| ||||| ||||| || || |||
Sbjct: 407 ccatcagttttcaatgttttcttgtagacatcaacaagcccattaaattgcctctcccct 466
Query: 933 cctcccttggcagccttggcatcattggccaaccttgtcctcgcataatccagggagtac 992
|| ||| ||||||||| |||||| |||| || || | ||||| |||| || ||
Sbjct: 467 cccttctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataa 526
Query: 993 acaaaaaacaaagaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccac 1052
||||||| | ||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 527 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 586
Query: 1053 ttccagtaaccatccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaac 1112
|||||||||||||||||||| |||||||| || || || ||||| ||||| ||||| |||
Sbjct: 587 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 646
Query: 1113 gcaaagttcaaagcctgagtagggaagtaacgaataacattagcagtgttacccctcca 1171
|||||||||||||||||||| || || ||||| |||||||| |||||||| || |||||
Sbjct: 647 gcaaagttcaaagcctgagtgggaaaataacggataacatttgcagtgtttcctctcca 705
Score = 83.8 bits (42), Expect = 2e-014
Identities = 150/186 (80%)
Strand = Plus / Plus
Query: 524 cacaccagcgccagcaatggcacgaagaatgttagcaccagcacccttgaacagggactt 583
||||||||| || ||||| ||||| || || || ||||| ||||||||||| || |||||
Sbjct: 58 cacaccagccccggcaatagcacggaggatatttgcacctgcacccttgaagagtgactt 117
Query: 584 ggggccttccttcttaaggatctgctggaatgcgtccaatgagctcttgtacttgacagc 643
|| ||||| || | | ||||| | ||||| ||||| || || |||||||| || ||
Sbjct: 118 ggcaccttcattttggacaatctgtttaaatgcatccaacgaacttttgtacttaactgc 177
Query: 644 ctcaccagaagtcatcatcatccttctgcggacagtatcaatggggtaagatgcaagacc 703
||||| |||||||||||||| ||||| || |||||||| || || || |||||||||||
Sbjct: 178 ttcaccggaagtcatcatcattcttcttcgtacagtatctataggatacgatgcaagacc 237
Query: 704 agcacc 709
||||||
Sbjct: 238 agcacc 243
>gb|DR072361.1|DR072361 RTDK1_25_F11.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_25_F11_A029 5', mRNA sequence
Length = 666
Score = 204 bits (103), Expect = 9e-051
Identities = 295/359 (82%)
Strand = Plus / Minus
Query: 813 ccacgataaacaataattccaacacaagatatgttaaatccacggtaaagcccagcaata 872
|||||||| || |||||||| |||||||| ||||| || ||||| || || ||||||||
Sbjct: 484 ccacgatagactataattcccacacaagaaatgttgaacccacgatagagaccagcaatt 425
Query: 873 ccatcagatttgagtgtcttgcggtagacatccacaagaccattgaattgtctatcgcct 932
||||||| ||| | ||| || ||||||||| ||||| ||||| ||||| || || |||
Sbjct: 424 ccatcagttttcaatgttttcttgtagacatcaacaagcccattaaattgcctctcccct 365
Query: 933 cctcccttggcagccttggcatcattggccaaccttgtcctcgcataatccagggagtac 992
|| ||| ||||||||| |||||| |||| || || | ||||| |||| || ||
Sbjct: 364 cccttctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataa 305
Query: 993 acaaaaaacaaagaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccac 1052
||||||| | ||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 304 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 245
Query: 1053 ttccagtaaccatccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaac 1112
|||||||||||||||||||| |||||||| || || || ||||| ||||| ||||| |||
Sbjct: 244 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 185
Query: 1113 gcaaagttcaaagcctgagtagggaagtaacgaataacattagcagtgttacccctcca 1171
|||||||||||||||||||| || || ||||| |||||||| |||||||| || |||||
Sbjct: 184 gcaaagttcaaagcctgagtgggaaaataacggataacatttgcagtgtttcctctcca 126
Score = 77.8 bits (39), Expect = 1e-012
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 631 tgtacttgacagcctcaccagaagtcatcatcatccttctgcggacagtatcaatggggt 690
||||||| || |||||||| |||||||||||||| ||||| || |||||||| || || |
Sbjct: 666 tgtacttaactgcctcaccggaagtcatcatcattcttcttcgtacagtatctataggat 607
Query: 691 aagatgcaagaccagcacc 709
| |||||||||||||||||
Sbjct: 606 acgatgcaagaccagcacc 588
>gb|DR119088.1|DR119088 RTMG1_21_C02.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_21_C02_A029 3', mRNA sequence
Length = 876
Score = 204 bits (103), Expect = 9e-051
Identities = 295/359 (82%)
Strand = Plus / Plus
Query: 813 ccacgataaacaataattccaacacaagatatgttaaatccacggtaaagcccagcaata 872
|||||||| || |||||||| |||||||| ||||| || ||||| || || ||||||||
Sbjct: 178 ccacgatagactataattcccacacaagaaatgttgaacccacgatagagaccagcaatt 237
Query: 873 ccatcagatttgagtgtcttgcggtagacatccacaagaccattgaattgtctatcgcct 932
||||||| ||| | ||| || ||||||||| ||||| ||||| ||||| || || |||
Sbjct: 238 ccatcagttttcaatgttttcttgtagacatcaacaagcccattaaattgcctctcccct 297
Query: 933 cctcccttggcagccttggcatcattggccaaccttgtcctcgcataatccagggagtac 992
|| ||| ||||||||| |||||| |||| || || | ||||| |||| || ||
Sbjct: 298 cccttctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataa 357
Query: 993 acaaaaaacaaagaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccac 1052
||||||| | ||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 358 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 417
Query: 1053 ttccagtaaccatccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaac 1112
|||||||||||||||||||| |||||||| || || || ||||| ||||| ||||| |||
Sbjct: 418 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 477
Query: 1113 gcaaagttcaaagcctgagtagggaagtaacgaataacattagcagtgttacccctcca 1171
|||||||||||||||||||| || || ||||| |||||||| |||||||| || |||||
Sbjct: 478 gcaaagttcaaagcctgagtgggaaaataacggataacatttgcagtgtttcctctcca 536
Score = 65.9 bits (33), Expect = 5e-009
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 645 tcaccagaagtcatcatcatccttctgcggacagtatcaatggggtaagatgcaagacca 704
||||| |||||||||||||| ||||| || |||||||| || || || ||||||||||||
Sbjct: 13 tcaccggaagtcatcatcattcttcttcgtacagtatctataggatacgatgcaagacca 72
Query: 705 gcacc 709
|||||
Sbjct: 73 gcacc 77
>gb|DR165853.1|DR165853 RTPHOS1_7_F02.g1_A029 Roots minus phosphorous Pinus taeda cDNA clone
RTPHOS1_7_F02_A029 5', mRNA sequence
Length = 890
Score = 204 bits (103), Expect = 9e-051
Identities = 295/359 (82%)
Strand = Plus / Minus
Query: 813 ccacgataaacaataattccaacacaagatatgttaaatccacggtaaagcccagcaata 872
|||||||| || |||||||| |||||||| ||||| || ||||| || || ||||||||
Sbjct: 626 ccacgatagactataattcccacacaagaaatgttgaacccacgatagagaccagcaatt 567
Query: 873 ccatcagatttgagtgtcttgcggtagacatccacaagaccattgaattgtctatcgcct 932
||||||| ||| | ||| || ||||||||| ||||| ||||| ||||| || || |||
Sbjct: 566 ccatcagttttcaatgttttcttgtagacatcaacaagcccattaaattgcctctcccct 507
Query: 933 cctcccttggcagccttggcatcattggccaaccttgtcctcgcataatccagggagtac 992
|| ||| ||||||||| |||||| |||| || || | ||||| |||| || ||
Sbjct: 506 cccttctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataa 447
Query: 993 acaaaaaacaaagaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccac 1052
||||||| | ||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 446 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 387
Query: 1053 ttccagtaaccatccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaac 1112
|||||||||||||||||||| |||||||| || || || ||||| ||||| ||||| |||
Sbjct: 386 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 327
Query: 1113 gcaaagttcaaagcctgagtagggaagtaacgaataacattagcagtgttacccctcca 1171
|||||||||||||||||||| || || ||||| |||||||| |||||||| || |||||
Sbjct: 326 gcaaagttcaaagcctgagtgggaaaataacggataacatttgcagtgtttcctctcca 268
Score = 75.8 bits (38), Expect = 5e-012
Identities = 83/98 (84%)
Strand = Plus / Minus
Query: 612 aatgcgtccaatgagctcttgtacttgacagcctcaccagaagtcatcatcatccttctg 671
||||| ||||| || || |||||||| || || ||||| |||||||||||||| |||||
Sbjct: 827 aatgcatccaacgaacttttgtacttaactgcttcaccggaagtcatcatcattcttctt 768
Query: 672 cggacagtatcaatggggtaagatgcaagaccagcacc 709
|| |||||||| || || || |||||||||||||||||
Sbjct: 767 cgtacagtatctataggatacgatgcaagaccagcacc 730
>gb|DR386244.1|DR386244 RTHG1_13_G10.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_13_G10_A029 5', mRNA sequence
Length = 793
Score = 204 bits (103), Expect = 9e-051
Identities = 295/359 (82%)
Strand = Plus / Minus
Query: 813 ccacgataaacaataattccaacacaagatatgttaaatccacggtaaagcccagcaata 872
|||||||| || |||||||| |||||||| ||||| || ||||| || || ||||||||
Sbjct: 651 ccacgatagactataattcccacacaagaaatgttgaacccacgatagagaccagcaatt 592
Query: 873 ccatcagatttgagtgtcttgcggtagacatccacaagaccattgaattgtctatcgcct 932
||||||| ||| | ||| || ||||||||| ||||| ||||| ||||| || || |||
Sbjct: 591 ccatcagttttcaatgttttcttgtagacatcaacaagcccattaaattgcctctcccct 532
Query: 933 cctcccttggcagccttggcatcattggccaaccttgtcctcgcataatccagggagtac 992
|| ||| ||||||||| |||||| |||| || || | ||||| |||| || ||
Sbjct: 531 cccttctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataa 472
Query: 993 acaaaaaacaaagaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccac 1052
||||||| | ||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 471 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 412
Query: 1053 ttccagtaaccatccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaac 1112
|||||||||||||||||||| |||||||| || || || ||||| ||||| ||||| |||
Sbjct: 411 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 352
Query: 1113 gcaaagttcaaagcctgagtagggaagtaacgaataacattagcagtgttacccctcca 1171
|||||||||||||||||||| || || ||||| |||||||| |||||||| || |||||
Sbjct: 351 gcaaagttcaaagcctgagtgggaaaataacggataacatttgcagtgtttcctctcca 293
>gb|BF610148.1|BF610148 NXSI_055_C08_F NXSI (Nsf Xylem Side wood Inclined) Pinus taeda cDNA
clone NXSI_055_C08 5' similar to Arabidopsis thaliana
sequence At4g28390 ADP,ATP carrier-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 526
Score = 202 bits (102), Expect = 3e-050
Identities = 294/358 (82%)
Strand = Plus / Minus
Query: 814 cacgataaacaataattccaacacaagatatgttaaatccacggtaaagcccagcaatac 873
||||||| || |||||||| |||||||| ||||| || ||||| || || |||||||| |
Sbjct: 359 cacgatagactataattcccacacaagaaatgttgaacccacgatagagaccagcaattc 300
Query: 874 catcagatttgagtgtcttgcggtagacatccacaagaccattgaattgtctatcgcctc 933
|||||| ||| | ||| || ||||||||| ||||| ||||| ||||| || || ||||
Sbjct: 299 catcagttttcaatgttttcttgtagacatcaacaagcccattaaattgcctctcccctc 240
Query: 934 ctcccttggcagccttggcatcattggccaaccttgtcctcgcataatccagggagtaca 993
| ||| ||||||||| |||||| |||| || || | ||||| |||| || || |
Sbjct: 239 ccttctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataaa 180
Query: 994 caaaaaacaaagaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccact 1053
|||||| | ||| || |||||||| |||||||||||||||||||| ||||||||||| |
Sbjct: 179 caaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccatt 120
Query: 1054 tccagtaaccatccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaacg 1113
||||||||||||||||||| |||||||| || || || ||||| ||||| ||||| ||||
Sbjct: 119 tccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaacg 60
Query: 1114 caaagttcaaagcctgagtagggaagtaacgaataacattagcagtgttacccctcca 1171
||||||||||||||||||| || || ||||| |||||||| |||||||| || |||||
Sbjct: 59 caaagttcaaagcctgagtgggaaaataacggataacatttgcagtgtttcctctcca 2
Score = 58.0 bits (29), Expect = 1e-006
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 653 agtcatcatcatccttctgcggacagtatcaatggggtaagatgcaagaccagcacc 709
|||||||||||| ||||| || |||||||| || || || |||||||||||||||||
Sbjct: 520 agtcatcatcattcttcttcgtacagtatctataggatacgatgcaagaccagcacc 464
>gb|BX249370.1|BX249370 BX249370 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP023C03 similar to ADP,ATP CARRIER PROTEIN,
mRNA sequence
Length = 669
Score = 198 bits (100), Expect = 5e-049
Identities = 285/347 (82%)
Strand = Plus / Minus
Query: 825 ataattccaacacaagatatgttaaatccacggtaaagcccagcaataccatcagatttg 884
|||||||| |||||||| ||||| || ||||| || || |||||||| |||||||||||
Sbjct: 661 ataattcccacacaagaaatgttgaacccacgatagagaccagcaattccatcagatttc 602
Query: 885 agtgtcttgcggtagacatccacaagaccattgaattgtctatcgcctcctcccttggca 944
| ||| || ||||||||| | ||| ||||| |||| || || ||||| ||| |||
Sbjct: 601 aatgttttcttgtagacatcaataagcccattanattgcctctcccctcccttctttgca 542
Query: 945 gccttggcatcattggccaaccttgtcctcgcataatccagggagtacacaaaaaacaaa 1004
|||||| ||||||||||| || || | ||||| |||| || || ||||||| | |
Sbjct: 541 gccttgttatcattggccagccgagttcgagcatagtccaaagaataaacaaaaaggaga 482
Query: 1005 gaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaacca 1064
|| || |||||||| |||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 481 gaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaacca 422
Query: 1065 tccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaa 1124
|||||||| |||||||| || || || ||||| ||||| ||||| |||||||||||||||
Sbjct: 421 tccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaa 362
Query: 1125 gcctgagtagggaagtaacgaataacattagcagtgttacccctcca 1171
|||||||| || || ||||| |||||||| |||||||| || |||||
Sbjct: 361 gcctgagtgggaaaataacggataacatttgcagtgtttcctctcca 315
>gb|BQ634709.1|BQ634709 NXRV072_C12_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV072_C12 5' similar to Arabidopsis thaliana
sequence At5g13490 adenosine nucleotide translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 795
Score = 198 bits (100), Expect = 5e-049
Identities = 294/359 (81%)
Strand = Plus / Minus
Query: 813 ccacgataaacaataattccaacacaagatatgttaaatccacggtaaagcccagcaata 872
||| |||| || |||||||| |||||||| ||||| || ||||| || || ||||||||
Sbjct: 692 ccangatagactataattcccacacaagaaatgttgaacccacgatagagaccagcaatt 633
Query: 873 ccatcagatttgagtgtcttgcggtagacatccacaagaccattgaattgtctatcgcct 932
||||||| ||| | ||| || ||||||||| ||||| ||||| ||||| || || |||
Sbjct: 632 ccatcagttttcaatgttttcttgtagacatcaacaagcccattaaattgcctctcccct 573
Query: 933 cctcccttggcagccttggcatcattggccaaccttgtcctcgcataatccagggagtac 992
|| ||| ||||||||| |||||| |||| || || | ||||| |||| || ||
Sbjct: 572 cccttctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataa 513
Query: 993 acaaaaaacaaagaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccac 1052
||||||| | ||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 512 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 453
Query: 1053 ttccagtaaccatccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaac 1112
|||||||||||||||||||| |||||||| || || || ||||| ||||| ||||| |||
Sbjct: 452 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 393
Query: 1113 gcaaagttcaaagcctgagtagggaagtaacgaataacattagcagtgttacccctcca 1171
|||||||||||||||||||| || || ||||| |||||||| |||||||| || |||||
Sbjct: 392 gcaaagttcaaagcctgagtgggaaaataacggataacatttgcagtgtttcctctcca 334
>gb|CF663717.1|CF663717 RTCNT1_4_E08.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_4_E08_A029 5', mRNA sequence
Length = 784
Score = 196 bits (99), Expect = 2e-048
Identities = 294/359 (81%)
Strand = Plus / Minus
Query: 813 ccacgataaacaataattccaacacaagatatgttaaatccacggtaaagcccagcaata 872
|||||||| || |||||||| |||||||| ||||| || ||||| || || ||||||||
Sbjct: 737 ccacgatagactataattcccacacaagaaatgttgaacccacgatagagaccagcaatt 678
Query: 873 ccatcagatttgagtgtcttgcggtagacatccacaagaccattgaattgtctatcgcct 932
||||||| ||| | ||| || ||||||||| | ||| ||||| ||||| || || |||
Sbjct: 677 ccatcagttttcaatgttttcttgtagacatcaataagcccattaaattgcctctcccct 618
Query: 933 cctcccttggcagccttggcatcattggccaaccttgtcctcgcataatccagggagtac 992
|| ||| ||||||||| |||||| |||| || || | ||||| |||| || ||
Sbjct: 617 cccttctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataa 558
Query: 993 acaaaaaacaaagaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccac 1052
||||||| | ||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 557 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 498
Query: 1053 ttccagtaaccatccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaac 1112
|||||||||||||||||||| |||||||| || || || ||||| ||||| ||||| |||
Sbjct: 497 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 438
Query: 1113 gcaaagttcaaagcctgagtagggaagtaacgaataacattagcagtgttacccctcca 1171
|||||||||||||||||||| || || ||||| |||||||| |||||||| || |||||
Sbjct: 437 gcaaagttcaaagcctgagtgggaaaataacggataacatttgcagtgtttcctctcca 379
>gb|CO163260.1|CO163260 FLD1_40_B01.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_40_B01_A029 5', mRNA sequence
Length = 810
Score = 196 bits (99), Expect = 2e-048
Identities = 285/347 (82%)
Strand = Plus / Minus
Query: 825 ataattccaacacaagatatgttaaatccacggtaaagcccagcaataccatcagatttg 884
|||||||| |||||||| ||||| || ||||| || || |||||||| ||||||| |||
Sbjct: 810 ataattcccacacaagaaatgttgaacccacgatagagaccagcaattccatcagttttc 751
Query: 885 agtgtcttgcggtagacatccacaagaccattgaattgtctatcgcctcctcccttggca 944
| ||| || ||||||||| ||||| ||||| ||||| || || ||||| ||| |||
Sbjct: 750 aatgttttcttgtagacatcaacaagcccattaaattgcctctcccctcccttctttgca 691
Query: 945 gccttggcatcattggccaaccttgtcctcgcataatccagggagtacacaaaaaacaaa 1004
|||||| |||||| |||| || || | ||||| |||| || || ||||||| | |
Sbjct: 690 gccttgttatcattagccagccgagttcgagcatagtccaaagaataaacaaaaaggaga 631
Query: 1005 gaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaacca 1064
|| || |||||||| |||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 630 gaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaacca 571
Query: 1065 tccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaa 1124
|||||||| |||||||| || || || ||||| ||||| ||||| |||||||||||||||
Sbjct: 570 tccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaa 511
Query: 1125 gcctgagtagggaagtaacgaataacattagcagtgttacccctcca 1171
|||||||| || || ||||| |||||||| |||||||| || |||||
Sbjct: 510 gcctgagtgggaaaataacggataacatttgcagtgtttcctctcca 464
>gb|DR050316.1|DR050316 RTBOR1_22_D10.g1_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_22_D10_A029 5', mRNA sequence
Length = 790
Score = 196 bits (99), Expect = 2e-048
Identities = 294/359 (81%)
Strand = Plus / Minus
Query: 813 ccacgataaacaataattccaacacaagatatgttaaatccacggtaaagcccagcaata 872
|||||||| || |||||||| |||||||| ||||| || ||||| || || ||||||||
Sbjct: 457 ccacgatagactataattcccacacaagaaatgttgaacccacgatagagaccagcaatt 398
Query: 873 ccatcagatttgagtgtcttgcggtagacatccacaagaccattgaattgtctatcgcct 932
||||||| ||| | ||| || ||||||||| | ||| ||||| ||||| || || |||
Sbjct: 397 ccatcagttttcaatgttttcttgtagacatcaataagcccattaaattgcctctcccct 338
Query: 933 cctcccttggcagccttggcatcattggccaaccttgtcctcgcataatccagggagtac 992
|| ||| ||||||||| |||||| |||| || || | ||||| |||| || ||
Sbjct: 337 cccttctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataa 278
Query: 993 acaaaaaacaaagaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccac 1052
||||||| | ||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 277 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 218
Query: 1053 ttccagtaaccatccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaac 1112
|||||||||||||||||||| |||||||| || || || ||||| ||||| ||||| |||
Sbjct: 217 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 158
Query: 1113 gcaaagttcaaagcctgagtagggaagtaacgaataacattagcagtgttacccctcca 1171
|||||||||||||||||||| || || ||||| |||||||| |||||||| || |||||
Sbjct: 157 gcaaagttcaaagcctgagtgggaaaataacggataacatttgcagtgtttcctctcca 99
Score = 91.7 bits (46), Expect = 9e-017
Identities = 151/186 (81%)
Strand = Plus / Minus
Query: 524 cacaccagcgccagcaatggcacgaagaatgttagcaccagcacccttgaacagggactt 583
||||||||| || ||||| ||||| || || || ||||| ||||||||||| || |||||
Sbjct: 746 cacaccagccccggcaatagcacggaggatatttgcacctgcacccttgaagagtgactt 687
Query: 584 ggggccttccttcttaaggatctgctggaatgcgtccaatgagctcttgtacttgacagc 643
|| ||||| || | | ||||| | ||||| ||||| || || |||||||| || ||
Sbjct: 686 ggaaccttcattttggacaatctgtttaaatgcatccaacgaacttttgtacttaactgc 627
Query: 644 ctcaccagaagtcatcatcatccttctgcggacagtatcaatggggtaagatgcaagacc 703
|||||| |||||||||||||| ||||| || |||||||| || || || |||||||||||
Sbjct: 626 ctcaccggaagtcatcatcattcttcttcgtacagtatctataggatacgatgcaagacc 567
Query: 704 agcacc 709
||||||
Sbjct: 566 agcacc 561
>gb|DR117547.1|DR117547 RTMG1_7_D06.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_7_D06_A029 5', mRNA sequence
Length = 837
Score = 196 bits (99), Expect = 2e-048
Identities = 294/359 (81%)
Strand = Plus / Minus
Query: 813 ccacgataaacaataattccaacacaagatatgttaaatccacggtaaagcccagcaata 872
|||||||| || |||||||| |||||||| ||||| || ||||| || || ||||||||
Sbjct: 668 ccacgatagactataattcccacacaagaaatgttgaacccacgatagagaccagcaatt 609
Query: 873 ccatcagatttgagtgtcttgcggtagacatccacaagaccattgaattgtctatcgcct 932
||||||| ||| | ||| || ||||||||| | ||| ||||| ||||| || || |||
Sbjct: 608 ccatcagttttcaatgttttcttgtagacatcaataagcccattaaattgcctctcccct 549
Query: 933 cctcccttggcagccttggcatcattggccaaccttgtcctcgcataatccagggagtac 992
|| ||| ||||||||| |||||| |||| || || | ||||| |||| || ||
Sbjct: 548 cccttctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataa 489
Query: 993 acaaaaaacaaagaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccac 1052
||||||| | ||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 488 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 429
Query: 1053 ttccagtaaccatccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaac 1112
|||||||||||||||||||| |||||||| || || || ||||| ||||| ||||| |||
Sbjct: 428 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 369
Query: 1113 gcaaagttcaaagcctgagtagggaagtaacgaataacattagcagtgttacccctcca 1171
|||||||||||||||||||| || || ||||| |||||||| |||||||| || |||||
Sbjct: 368 gcaaagttcaaagcctgagtgggaaaataacggataacatttgcagtgtttcctctcca 310
Score = 67.9 bits (34), Expect = 1e-009
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 644 ctcaccagaagtcatcatcatccttctgcggacagtatcaatggggtaagatgcaagacc 703
|||||| |||||||||||||| ||||| || |||||||| || || || |||||||||||
Sbjct: 837 ctcaccggaagtcatcatcattcttcttcgtacagtatctataggatacgatgcaagacc 778
Query: 704 agcacc 709
||||||
Sbjct: 777 agcacc 772
>gb|DR385595.1|DR385595 RTHG1_9_D06.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_9_D06_A029 5', mRNA sequence
Length = 731
Score = 196 bits (99), Expect = 2e-048
Identities = 294/359 (81%)
Strand = Plus / Minus
Query: 813 ccacgataaacaataattccaacacaagatatgttaaatccacggtaaagcccagcaata 872
|||||||| || |||||||| |||||||| ||||| || ||||| || || ||||||||
Sbjct: 564 ccacgatagactataattcccacacaagaaatgttgaacccacgatagagaccagcaatt 505
Query: 873 ccatcagatttgagtgtcttgcggtagacatccacaagaccattgaattgtctatcgcct 932
||||||| ||| | ||| || ||||||||| | ||| ||||| ||||| || || |||
Sbjct: 504 ccatcagttttcaatgttttcttgtagacatcaataagcccattaaattgcctctcccct 445
Query: 933 cctcccttggcagccttggcatcattggccaaccttgtcctcgcataatccagggagtac 992
|| ||| ||||||||| |||||| |||| || || | ||||| |||| || ||
Sbjct: 444 cccttctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataa 385
Query: 993 acaaaaaacaaagaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccac 1052
||||||| | ||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 384 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 325
Query: 1053 ttccagtaaccatccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaac 1112
|||||||||||||||||||| |||||||| || || || ||||| ||||| ||||| |||
Sbjct: 324 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 265
Query: 1113 gcaaagttcaaagcctgagtagggaagtaacgaataacattagcagtgttacccctcca 1171
|||||||||||||||||||| || || ||||| |||||||| |||||||| || |||||
Sbjct: 264 gcaaagttcaaagcctgagtgggaaaataacggataacatttgcagtgtttcctctcca 206
Score = 63.9 bits (32), Expect = 2e-008
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 646 caccagaagtcatcatcatccttctgcggacagtatcaatggggtaagatgcaagaccag 705
|||| |||||||||||||| ||||| || |||||||| || || || |||||||||||||
Sbjct: 731 caccggaagtcatcatcattcttcttcgtacagtatctataggatacgatgcaagaccag 672
Query: 706 cacc 709
||||
Sbjct: 671 cacc 668
>gb|DT625022.1|DT625022 EST1159297 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAL08 5' end, mRNA sequence
Length = 950
Score = 196 bits (99), Expect = 2e-048
Identities = 285/347 (82%)
Strand = Plus / Minus
Query: 825 ataattccaacacaagatatgttaaatccacggtaaagcccagcaataccatcagatttg 884
|||||||| |||||||| ||||| || ||||| || || |||||||| ||||||| |||
Sbjct: 945 ataattcccacacaagaaatgttgaacccacgatagagaccagcaattccatcagttttc 886
Query: 885 agtgtcttgcggtagacatccacaagaccattgaattgtctatcgcctcctcccttggca 944
| ||| || ||||||||| ||||| ||||| ||||| || || ||||| ||| |||
Sbjct: 885 aatgttttcttgtagacatcaacaagcccattaaattgcctctcccctcccttctttgca 826
Query: 945 gccttggcatcattggccaaccttgtcctcgcataatccagggagtacacaaaaaacaaa 1004
|||||| |||||| |||| || || | ||||| |||| || || ||||||| | |
Sbjct: 825 gccttgttatcattagccagccgagttcgagcatagtccaaagaataaacaaaaaggaga 766
Query: 1005 gaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaacca 1064
|| || |||||||| |||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 765 gaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaacca 706
Query: 1065 tccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaa 1124
|||||||| |||||||| || || || ||||| ||||| ||||| |||||||||||||||
Sbjct: 705 tccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaa 646
Query: 1125 gcctgagtagggaagtaacgaataacattagcagtgttacccctcca 1171
|||||||| || || ||||| |||||||| |||||||| || |||||
Sbjct: 645 gcctgagtgggaaaataacggataacatttgcagtgtttcctctcca 599
>gb|DR081289.1|DR081289 RTFEPL1_28_D04.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_28_D04_A029 5', mRNA sequence
Length = 674
Score = 192 bits (97), Expect = 3e-047
Identities = 280/341 (82%)
Strand = Plus / Minus
Query: 813 ccacgataaacaataattccaacacaagatatgttaaatccacggtaaagcccagcaata 872
|||||||| || |||||||| |||||||| ||||| || ||||| || || ||||||||
Sbjct: 344 ccacgatagactataattcccacacaagaaatgttgaacccacgatagagaccagcaatt 285
Query: 873 ccatcagatttgagtgtcttgcggtagacatccacaagaccattgaattgtctatcgcct 932
||||||| ||| | ||| || ||||||||| ||||| ||||| ||||| || || |||
Sbjct: 284 ccatcagttttcaatgttttcttgtagacatcaacaagcccattaaattgcctctcccct 225
Query: 933 cctcccttggcagccttggcatcattggccaaccttgtcctcgcataatccagggagtac 992
|| ||| ||||||||| |||||| |||| || || | ||||| |||| || ||
Sbjct: 224 cccttctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataa 165
Query: 993 acaaaaaacaaagaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccac 1052
||||||| | ||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 164 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 105
Query: 1053 ttccagtaaccatccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaac 1112
|||||||||||||||||||| |||||||| || || || ||||| ||||| ||||| |||
Sbjct: 104 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 45
Query: 1113 gcaaagttcaaagcctgagtagggaagtaacgaataacatt 1153
|||||||||||||||||||| || || ||||| ||||||||
Sbjct: 44 gcaaagttcaaagcctgagtgggaaaataacggataacatt 4
Score = 83.8 bits (42), Expect = 2e-014
Identities = 150/186 (80%)
Strand = Plus / Minus
Query: 524 cacaccagcgccagcaatggcacgaagaatgttagcaccagcacccttgaacagggactt 583
||||||||| || ||||| ||||| || || || ||||| ||||||||||| || |||||
Sbjct: 633 cacaccagccccggcaatagcacggaggatatttgcacctgcacccttgaagagtgactt 574
Query: 584 ggggccttccttcttaaggatctgctggaatgcgtccaatgagctcttgtacttgacagc 643
|| ||||| || | | ||||| | ||||| ||||| || || |||||||| || ||
Sbjct: 573 ggcaccttcattttggacaatctgtttaaatgcatccaacgaacttttgtacttaactgc 514
Query: 644 ctcaccagaagtcatcatcatccttctgcggacagtatcaatggggtaagatgcaagacc 703
||||| |||||||||||||| ||||| || |||||||| || || || |||||||||||
Sbjct: 513 ttcaccggaagtcatcatcattcttcttcgtacagtatctataggatacgatgcaagacc 454
Query: 704 agcacc 709
||||||
Sbjct: 453 agcacc 448
>gb|AI812944.1|AI812944 22G12 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence
Length = 580
Score = 186 bits (94), Expect = 2e-045
Identities = 277/338 (81%)
Strand = Plus / Minus
Query: 813 ccacgataaacaataattccaacacaagatatgttaaatccacggtaaagcccagcaata 872
|||||||| || |||||||| |||||||| ||||| || ||||| || || ||||||||
Sbjct: 338 ccacgatagactataattcccacacaagaaatgttgaacccacgatagagaccagcaatt 279
Query: 873 ccatcagatttgagtgtcttgcggtagacatccacaagaccattgaattgtctatcgcct 932
||||||| ||| | ||| || ||||||||| ||||| ||||| ||||| || || |||
Sbjct: 278 ccatcagttttcaatgttttcttgtagacatcaacaagcccattaaattgcctctcccct 219
Query: 933 cctcccttggcagccttggcatcattggccaaccttgtcctcgcataatccagggagtac 992
|| ||| ||||||||| |||||| |||| || || | ||||| |||| || ||
Sbjct: 218 cccttctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataa 159
Query: 993 acaaaaaacaaagaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccac 1052
||||||| | ||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 158 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 99
Query: 1053 ttccagtaaccatccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaac 1112
|||||||||||||||||||| |||||||| || || || ||||| ||||| ||||| |||
Sbjct: 98 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 39
Query: 1113 gcaaagttcaaagcctgagtagggaagtaacgaataac 1150
|||||||||||||||||||| || || ||||| |||||
Sbjct: 38 gcaaagttcaaagcctgagtgggaaaataacggataac 1
Score = 83.8 bits (42), Expect = 2e-014
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 612 aatgcgtccaatgagctcttgtacttgacagcctcaccagaagtcatcatcatccttctg 671
||||| ||||| || || |||||||| || |||||||| |||||||||||||| |||||
Sbjct: 539 aatgcatccaacgaacttttgtacttaactgcctcaccggaagtcatcatcattcttctt 480
Query: 672 cggacagtatcaatggggtaagatgcaagaccagcacc 709
|| |||||||| || || || |||||||||||||||||
Sbjct: 479 cgtacagtatctataggatacgatgcaagaccagcacc 442
>gb|BQ634195.1|BQ634195 NXRV064_H09_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV064_H09 5' similar to Arabidopsis thaliana
sequence At5g13490 adenosine nucleotide translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 750
Score = 186 bits (94), Expect = 2e-045
Identities = 291/359 (81%)
Strand = Plus / Minus
Query: 813 ccacgataaacaataattccaacacaagatatgttaaatccacggtaaagcccagcaata 872
|||||||| || |||||||| |||||||| ||||| || ||||| || || ||||||||
Sbjct: 692 ccacgatagactataattcccacacaagaaatgttgaacccacgatagagaccagcaatt 633
Query: 873 ccatcagatttgagtgtcttgcggtagacatccacaagaccattgaattgtctatcgcct 932
||||||| ||| | ||| || ||||||||| ||||| ||||| ||||| || ||
Sbjct: 632 ccatcagttttcaatgttttcttgtagacatcaacaagcccattaaattgcctctccnnn 573
Query: 933 cctcccttggcagccttggcatcattggccaaccttgtcctcgcataatccagggagtac 992
| ||| ||||||||| |||||| |||| || || | ||||| |||| || ||
Sbjct: 572 cnnnnctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataa 513
Query: 993 acaaaaaacaaagaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccac 1052
||||||| | ||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 512 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 453
Query: 1053 ttccagtaaccatccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaac 1112
|||||||||||||||||||| |||||||| || || || ||||| ||||| ||||| |||
Sbjct: 452 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 393
Query: 1113 gcaaagttcaaagcctgagtagggaagtaacgaataacattagcagtgttacccctcca 1171
|||||||||||||||||||| || || ||||| |||||||| |||||||| || |||||
Sbjct: 392 gcaaagttcaaagcctgagtgggaaaataacggataacatttgcagtgtttcctctcca 334
>gb|DR387015.1|DR387015 RTHG1_18_G07.g1_A029 Roots plus added mercury Pinus taeda cDNA clone
RTHG1_18_G07_A029 5', mRNA sequence
Length = 756
Score = 186 bits (94), Expect = 2e-045
Identities = 283/346 (81%)
Strand = Plus / Minus
Query: 813 ccacgataaacaataattccaacacaagatatgttaaatccacggtaaagcccagcaata 872
|||||||| || |||||||| |||||||| ||||| || ||||| || || ||||||||
Sbjct: 358 ccacgatagactataattcccacacaagaaatgttgaacccacgatagagaccagcaatt 299
Query: 873 ccatcagatttgagtgtcttgcggtagacatccacaagaccattgaattgtctatcgcct 932
||||||| ||| | ||| || ||||||||| | ||| ||||| ||||| || || |||
Sbjct: 298 ccatcagttttcaatgttttcttgtagacatcaataagcccattaaattgcctctcccct 239
Query: 933 cctcccttggcagccttggcatcattggccaaccttgtcctcgcataatccagggagtac 992
|| ||| ||||||||| |||||| |||| || || | ||||| |||| || ||
Sbjct: 238 cccttctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataa 179
Query: 993 acaaaaaacaaagaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccac 1052
||||||| | ||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 178 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 119
Query: 1053 ttccagtaaccatccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaac 1112
|||||||||||||||||||| |||||||| || || || ||||| ||||| ||||| |||
Sbjct: 118 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 59
Query: 1113 gcaaagttcaaagcctgagtagggaagtaacgaataacattagcag 1158
|||||||||||||||||||| || || ||||| |||||||| ||||
Sbjct: 58 gcaaagttcaaagcctgagtgggaaaataacggataacatttgcag 13
Score = 91.7 bits (46), Expect = 9e-017
Identities = 151/186 (81%)
Strand = Plus / Minus
Query: 524 cacaccagcgccagcaatggcacgaagaatgttagcaccagcacccttgaacagggactt 583
||||||||| || ||||| ||||| || || || ||||| ||||||||||| || |||||
Sbjct: 647 cacaccagccccggcaatagcacggaggatatttgcacctgcacccttgaagagtgactt 588
Query: 584 ggggccttccttcttaaggatctgctggaatgcgtccaatgagctcttgtacttgacagc 643
|| ||||| || | | ||||| | ||||| ||||| || || |||||||| || ||
Sbjct: 587 ggaaccttcattttggacaatctgtttaaatgcatccaacgaacttttgtacttaactgc 528
Query: 644 ctcaccagaagtcatcatcatccttctgcggacagtatcaatggggtaagatgcaagacc 703
|||||| |||||||||||||| ||||| || |||||||| || || || |||||||||||
Sbjct: 527 ctcaccggaagtcatcatcattcttcttcgtacagtatctataggatacgatgcaagacc 468
Query: 704 agcacc 709
||||||
Sbjct: 467 agcacc 462
>gb|BQ634705.1|BQ634705 NXRV072_C08_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV072_C08 5' similar to Arabidopsis thaliana
sequence At3g08580 adenylate translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 731
Score = 182 bits (92), Expect = 3e-044
Identities = 279/343 (81%)
Strand = Plus / Minus
Query: 829 ttccaacacaagatatgttaaatccacggtaaagcccagcaataccatcagatttgagtg 888
|||| |||||||| ||||| || ||||| || || |||||||| ||||||| ||| | ||
Sbjct: 678 ttcccacacaagaaatgttgaacccacgatagagaccagcaattccatcagttttcaatg 619
Query: 889 tcttgcggtagacatccacaagaccattgaattgtctatcgcctcctcccttggcagcct 948
| ||||||||| ||||| ||||| ||||| || || ||||| ||| |||||||
Sbjct: 618 tnnntnngtagacatcaacaagcccattaaattgcctctcccctcccttctttgcagcct 559
Query: 949 tggcatcattggccaaccttgtcctcgcataatccagggagtacacaaaaaacaaagagg 1008
|| |||||| |||| || || | ||||| |||| || || ||||||| | ||| |
Sbjct: 558 tgttatcattagccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaag 499
Query: 1009 aagcaccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaaccatccc 1068
| |||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 498 atgcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccc 439
Query: 1069 tgtccttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaagcct 1128
|||| |||||||| || || || ||||| ||||| ||||| |||||||||||||||||||
Sbjct: 438 tgtctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcct 379
Query: 1129 gagtagggaagtaacgaataacattagcagtgttacccctcca 1171
|||| || || ||||| |||||||| |||||||| || |||||
Sbjct: 378 gagtgggaaaataacggataacatttgcagtgtttcctctcca 336
>gb|CF395120.1|CF395120 RTDS2_9_A02.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_9_A02_A021 5', mRNA sequence
Length = 534
Score = 182 bits (92), Expect = 3e-044
Identities = 284/347 (81%), Gaps = 1/347 (0%)
Strand = Plus / Minus
Query: 813 ccacgataaacaataattccaacacaagatatgttaaatccacggtaaagcccagcaata 872
|||||||| || |||||||| |||||||| ||||| || ||||| || || ||||||||
Sbjct: 364 ccacgatagactataattcccacacaagaaatgttgaacccacgatagagaccagcaatt 305
Query: 873 ccatcagatttgagtgtcttgcggtagacatccacaagacc-attgaattgtctatcgcc 931
||||||| ||| | ||| || ||||||||| ||||| || ||| ||||| || || ||
Sbjct: 304 ccatcagttttcaatgttttcttgtagacatcaacaagncccattaaattgcctctcccc 245
Query: 932 tcctcccttggcagccttggcatcattggccaaccttgtcctcgcataatccagggagta 991
||| ||| ||||||||| |||||| |||| || || | ||||| |||| || ||
Sbjct: 244 tcccttctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaata 185
Query: 992 cacaaaaaacaaagaggaagcaccagcagcaccaccagaggccaggttgccagcaaacca 1051
||||||| | ||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 184 aacaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaacca 125
Query: 1052 cttccagtaaccatccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaa 1111
|||||||||||||||||||| |||||||| || || || ||||| ||||| ||||| ||
Sbjct: 124 tttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaa 65
Query: 1112 cgcaaagttcaaagcctgagtagggaagtaacgaataacattagcag 1158
||||||||||||||||||||| || || ||||| |||||||| ||||
Sbjct: 64 cgcaaagttcaaagcctgagtgggaaaataacggataacatttgcag 18
Score = 65.9 bits (33), Expect = 5e-009
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 645 tcaccagaagtcatcatcatccttctgcggacagtatcaatggggtaagatgcaagacca 704
||||| |||||||||||||| ||||| || |||||||| || || || ||||||||||||
Sbjct: 532 tcaccggaagtcatcatcattcttcttcgtacagtatctataggatacgatgcaagacca 473
Query: 705 gcacc 709
|||||
Sbjct: 472 gcacc 468
>gb|CO367254.1|CO367254 RTK1_33_E04.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_33_E04_A029 3', mRNA sequence
Length = 878
Score = 182 bits (92), Expect = 3e-044
Identities = 281/344 (81%)
Strand = Plus / Plus
Query: 828 attccaacacaagatatgttaaatccacggtaaagcccagcaataccatcagatttgagt 887
||||| |||||||| ||||| || ||||| || || |||||||| ||||||| ||| | |
Sbjct: 42 attcccacacaagaaatgttgaacccacgatagagaccagcaattccatcagttttcaat 101
Query: 888 gtcttgcggtagacatccacaagaccattgaattgtctatcgcctcctcccttggcagcc 947
|| || ||||||||| | ||| ||||| ||||| || || ||||| ||| ||||||
Sbjct: 102 gttttcttgtagacatcaataagcccattaaattgcctctcccctcccttctttgcagcc 161
Query: 948 ttggcatcattggccaaccttgtcctcgcataatccagggagtacacaaaaaacaaagag 1007
||| |||||| |||| || || | ||||| |||| || || ||||||| | |||
Sbjct: 162 ttgttatcattagccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaa 221
Query: 1008 gaagcaccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaaccatcc 1067
|| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 222 gatgcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaaccatcc 281
Query: 1068 ctgtccttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaagcc 1127
||||| |||||||| || || || ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 282 ctgtctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcc 341
Query: 1128 tgagtagggaagtaacgaataacattagcagtgttacccctcca 1171
||||| || || ||||| |||||||| |||||||| || |||||
Sbjct: 342 tgagtgggaaaataacggataacatttgcagtgtttcctctcca 385
>gb|DR015317.1|DR015317 STRS1_2_F07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_2_F07_A034 5', mRNA sequence
Length = 900
Score = 182 bits (92), Expect = 3e-044
Identities = 263/320 (82%)
Strand = Plus / Plus
Query: 813 ccacgataaacaataattccaacacaagatatgttaaatccacggtaaagcccagcaata 872
|||||||| || |||||||| |||||||| ||||| || ||||| || || ||||||||
Sbjct: 575 ccacgatagactataattcccacacaagaaatgttgaacccacgatagagaccagcaatt 634
Query: 873 ccatcagatttgagtgtcttgcggtagacatccacaagaccattgaattgtctatcgcct 932
||||||| ||| | ||| || ||||||||| ||||| ||||| ||||| || || |||
Sbjct: 635 ccatcagttttcaatgttttcttgtagacatcaacaagcccattaaattgcctctcccct 694
Query: 933 cctcccttggcagccttggcatcattggccaaccttgtcctcgcataatccagggagtac 992
|| ||| ||||||||| |||||| |||| || || | ||||| |||| || ||
Sbjct: 695 cccttctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataa 754
Query: 993 acaaaaaacaaagaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccac 1052
||||||| | ||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 755 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 814
Query: 1053 ttccagtaaccatccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaac 1112
|||||||||||||||||||| |||||||| || || || ||||| ||||| ||||| |||
Sbjct: 815 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 874
Query: 1113 gcaaagttcaaagcctgagt 1132
||||||||||||||||||||
Sbjct: 875 gcaaagttcaaagcctgagt 894
Score = 91.7 bits (46), Expect = 9e-017
Identities = 151/186 (81%)
Strand = Plus / Plus
Query: 524 cacaccagcgccagcaatggcacgaagaatgttagcaccagcacccttgaacagggactt 583
||||||||| || ||||| ||||| || || || ||||| ||||||||||| || |||||
Sbjct: 286 cacaccagccccggcaatagcacggaggatatttgcacctgcacccttgaagagtgactt 345
Query: 584 ggggccttccttcttaaggatctgctggaatgcgtccaatgagctcttgtacttgacagc 643
|| ||||| || | | ||||| | ||||| ||||| || || |||||||| || ||
Sbjct: 346 ggcaccttcattttggacaatctgtttaaatgcatccaacgaacttttgtacttaactgc 405
Query: 644 ctcaccagaagtcatcatcatccttctgcggacagtatcaatggggtaagatgcaagacc 703
|||||| |||||||||||||| ||||| || |||||||| || || || |||||||||||
Sbjct: 406 ctcaccggaagtcatcatcattcttcttcgtacagtatctataggatacgatgcaagacc 465
Query: 704 agcacc 709
||||||
Sbjct: 466 agcacc 471
>gb|CO162784.1|CO162784 FLD1_37_B04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_37_B04_A029 5', mRNA sequence
Length = 878
Score = 180 bits (91), Expect = 1e-043
Identities = 262/319 (82%)
Strand = Plus / Minus
Query: 813 ccacgataaacaataattccaacacaagatatgttaaatccacggtaaagcccagcaata 872
|||||||| || |||||||| |||||||| ||||| || ||||| || || ||||||||
Sbjct: 332 ccacgatagactataattcccacacaagaaatgttgaacccacgatagagaccagcaatt 273
Query: 873 ccatcagatttgagtgtcttgcggtagacatccacaagaccattgaattgtctatcgcct 932
||||||| ||| | ||| || ||||||||| ||||| ||||| ||||| || || |||
Sbjct: 272 ccatcagttttcaatgttttcttgtagacatcaacaagcccattaaattgcctctcccct 213
Query: 933 cctcccttggcagccttggcatcattggccaaccttgtcctcgcataatccagggagtac 992
|| ||| ||||||||| |||||| |||| || || | ||||| |||| || ||
Sbjct: 212 cccttctttgcagccttgttatcattagccagccgagttcgagcatagtccaaagaataa 153
Query: 993 acaaaaaacaaagaggaagcaccagcagcaccaccagaggccaggttgccagcaaaccac 1052
||||||| | ||| || |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 152 acaaaaaggagagaagatgcaccagctgcaccaccagaggccaggtttccagcaaaccat 93
Query: 1053 ttccagtaaccatccctgtccttcttgaagttgaacagcctcttgaagtagtccttaaac 1112
|||||||||||||||||||| |||||||| || || || ||||| ||||| ||||| |||
Sbjct: 92 ttccagtaaccatccctgtctttcttgaaattaaagagtctcttaaagtaatccttgaac 33
Query: 1113 gcaaagttcaaagcctgag 1131
|||||||||||||||||||
Sbjct: 32 gcaaagttcaaagcctgag 14
Score = 83.8 bits (42), Expect = 2e-014
Identities = 150/186 (80%)
Strand = Plus / Minus
Query: 524 cacaccagcgccagcaatggcacgaagaatgttagcaccagcacccttgaacagggactt 583
||||||||| || ||||| ||||| || || || ||||| ||||||||||| || |||||
Sbjct: 621 cacaccagccccggcaatagcacggaggatatttgcacctgcacccttgaagagtgactt 562
Query: 584 ggggccttccttcttaaggatctgctggaatgcgtccaatgagctcttgtacttgacagc 643
|| ||||| || | | ||||| | ||||| ||||| || || |||||||| || ||
Sbjct: 561 ggcaccttcattttggacaatctgtttaaatgcatccaacgaacttttgtacttaactgc 502
Query: 644 ctcaccagaagtcatcatcatccttctgcggacagtatcaatggggtaagatgcaagacc 703
||||| |||||||||||||| ||||| || |||||||| || || || |||||||||||
Sbjct: 501 ttcaccggaagtcatcatcattcttcttcgtacagtatctataggatacgatgcaagacc 442
Query: 704 agcacc 709
||||||
Sbjct: 441 agcacc 436
>gb|CF474863.1|CF474863 RTWW2_8_E08.g1_A021 Well-watered loblolly pine roots WW2 Pinus taeda
cDNA clone RTWW2_8_E08_A021 5', mRNA sequence
Length = 723
Score = 178 bits (90), Expect = 5e-043
Identities = 273/334 (81%)
Strand = Plus / Minus
Query: 838 aagatatgttaaatccacggtaaagcccagcaataccatcagatttgagtgtcttgcggt 897
|||| ||||| || ||||| || || |||||||| ||||||| ||| | ||| || ||
Sbjct: 723 aagaaatgttgaacccacgatagagaccagcaattccatcagttttcaatgttttcttgt 664
Query: 898 agacatccacaagaccattgaattgtctatcgcctcctcccttggcagccttggcatcat 957
||||||| ||||| ||||| ||||| || || ||||| ||| ||||||||| |||||
Sbjct: 663 agacatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgttatcat 604
Query: 958 tggccaaccttgtcctcgcataatccagggagtacacaaaaaacaaagaggaagcaccag 1017
| |||| || || | ||||| |||| || || ||||||| | ||| || |||||||
Sbjct: 603 tagccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgcaccag 544
Query: 1018 cagcaccaccagaggccaggttgccagcaaaccacttccagtaaccatccctgtccttct 1077
| |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||
Sbjct: 543 ctgcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtctttct 484
Query: 1078 tgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaagcctgagtaggga 1137
|||| || || || ||||| ||||| ||||| ||||||||||||||||||||||| || |
Sbjct: 483 tgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtgggaa 424
Query: 1138 agtaacgaataacattagcagtgttacccctcca 1171
| ||||| |||||||| |||||||| || |||||
Sbjct: 423 aataacggataacatttgcagtgtttcctctcca 390
>gb|DN465628.1|DN465628 EST961427 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIJS53 5' end, mRNA sequence
Length = 947
Score = 178 bits (90), Expect = 5e-043
Identities = 277/338 (81%), Gaps = 1/338 (0%)
Strand = Plus / Minus
Query: 834 acacaagatatgttaaatccacggtaaagcccagcaataccatcagatttgagtgtcttg 893
|||||||| ||||| || ||||| || || |||||||| ||||||| ||| | ||| ||
Sbjct: 945 acacaagaaatgttgaa-ccacgatagagaccagcaattccatcagttttcaatgttttc 887
Query: 894 cggtagacatccacaagaccattgaattgtctatcgcctcctcccttggcagccttggca 953
||||||||| ||||| ||||| ||||| || || ||||| ||| ||||||||| |
Sbjct: 886 ttgtagacatcaacaagcccattaaattgcctctcccctcccttctttgcagccttgtta 827
Query: 954 tcattggccaaccttgtcctcgcataatccagggagtacacaaaaaacaaagaggaagca 1013
||||| |||| || || | ||||| |||| || || ||||||| | ||| || |||
Sbjct: 826 tcattagccagccgagttcgagcatagtccaaagaataaacaaaaaggagagaagatgca 767
Query: 1014 ccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaaccatccctgtcc 1073
||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 766 ccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctgtct 707
Query: 1074 ttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaagcctgagta 1133
|||||||| || || || ||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 706 ttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctgagtg 647
Query: 1134 gggaagtaacgaataacattagcagtgttacccctcca 1171
|| || ||||| |||||||| |||||||| || |||||
Sbjct: 646 ggaaaataacggataacatttgcagtgtttcctctcca 609
>gb|BF049640.1|BF049640 NXCI_108_D04_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_108_D04 5' similar to Arabidopsis
thaliana sequence At4g28390 ADP,ATP carrier-like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 447
Score = 176 bits (89), Expect = 2e-042
Identities = 143/161 (88%)
Strand = Plus / Minus
Query: 1011 gcaccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaaccatccctg 1070
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 253 gcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctg 194
Query: 1071 tccttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaagcctga 1130
|| |||||||| || || || ||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 193 tctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctga 134
Query: 1131 gtagggaagtaacgaataacattagcagtgttacccctcca 1171
|| || || ||||| |||||||| |||||||| || |||||
Sbjct: 133 gtgggaaaataacggataacatttgcagtgtttcctctcca 93
>gb|BF169906.1|BF169906 NXCI_127_H07_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda
cDNA clone NXCI_127_H07 5' similar to Arabidopsis
thaliana sequence At4g28390 ADP,ATP carrier-like protein
see http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 370
Score = 176 bits (89), Expect = 2e-042
Identities = 143/161 (88%)
Strand = Plus / Minus
Query: 1011 gcaccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaaccatccctg 1070
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 185 gcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctg 126
Query: 1071 tccttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaagcctga 1130
|| |||||||| || || || ||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 125 tctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctga 66
Query: 1131 gtagggaagtaacgaataacattagcagtgttacccctcca 1171
|| || || ||||| |||||||| |||||||| || |||||
Sbjct: 65 gtgggaaaataacggataacatttgcagtgtttcctctcca 25
>gb|BM133906.1|BM133906 NXLV_014_A03_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_014_A03 5' similar to Arabidopsis thaliana
sequence At4g28390 ADP,ATP carrier-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 512
Score = 176 bits (89), Expect = 2e-042
Identities = 143/161 (88%)
Strand = Plus / Minus
Query: 1011 gcaccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaaccatccctg 1070
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 389 gcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctg 330
Query: 1071 tccttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaagcctga 1130
|| |||||||| || || || ||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 329 tctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctga 270
Query: 1131 gtagggaagtaacgaataacattagcagtgttacccctcca 1171
|| || || ||||| |||||||| |||||||| || |||||
Sbjct: 269 gtgggaaaataacggataacatttgcagtgtttcctctcca 229
>gb|BQ291272.1|BQ291272 NXRV058_B02_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV058_B02 5' similar to Arabidopsis thaliana
sequence At3g08580 adenylate translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 703
Score = 176 bits (89), Expect = 2e-042
Identities = 143/161 (88%)
Strand = Plus / Minus
Query: 1011 gcaccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaaccatccctg 1070
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 494 gcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctg 435
Query: 1071 tccttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaagcctga 1130
|| |||||||| || || || ||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 434 tctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctga 375
Query: 1131 gtagggaagtaacgaataacattagcagtgttacccctcca 1171
|| || || ||||| |||||||| |||||||| || |||||
Sbjct: 374 gtgggaaaataacggataacatttgcagtgtttcctctcca 334
>gb|BQ291438.1|BQ291438 NXRV059_B03_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV059_B03 5' similar to Arabidopsis thaliana
sequence At5g13490 adenosine nucleotide translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 662
Score = 176 bits (89), Expect = 2e-042
Identities = 143/161 (88%)
Strand = Plus / Minus
Query: 1011 gcaccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaaccatccctg 1070
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 494 gcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctg 435
Query: 1071 tccttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaagcctga 1130
|| |||||||| || || || ||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 434 tctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctga 375
Query: 1131 gtagggaagtaacgaataacattagcagtgttacccctcca 1171
|| || || ||||| |||||||| |||||||| || |||||
Sbjct: 374 gtgggaaaataacggataacatttgcagtgtttcctctcca 334
>gb|BQ633794.1|BQ633794 NXRV060_G12_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV060_G12 5' similar to Arabidopsis thaliana
sequence At4g28390 ADP,ATP carrier-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 651
Score = 176 bits (89), Expect = 2e-042
Identities = 143/161 (88%)
Strand = Plus / Minus
Query: 1011 gcaccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaaccatccctg 1070
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 494 gcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctg 435
Query: 1071 tccttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaagcctga 1130
|| |||||||| || || || ||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 434 tctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctga 375
Query: 1131 gtagggaagtaacgaataacattagcagtgttacccctcca 1171
|| || || ||||| |||||||| |||||||| || |||||
Sbjct: 374 gtgggaaaataacggataacatttgcagtgtttcctctcca 334
>gb|BQ633798.1|BQ633798 NXRV060_H04_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV060_H04 5' similar to Arabidopsis thaliana
sequence At5g13490 adenosine nucleotide translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 699
Score = 176 bits (89), Expect = 2e-042
Identities = 143/161 (88%)
Strand = Plus / Minus
Query: 1011 gcaccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaaccatccctg 1070
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 494 gcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctg 435
Query: 1071 tccttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaagcctga 1130
|| |||||||| || || || ||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 434 tctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctga 375
Query: 1131 gtagggaagtaacgaataacattagcagtgttacccctcca 1171
|| || || ||||| |||||||| |||||||| || |||||
Sbjct: 374 gtgggaaaataacggataacatttgcagtgtttcctctcca 334
>gb|BQ633829.1|BQ633829 NXRV061_D03_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV061_D03 5' similar to Arabidopsis thaliana
sequence At4g28390 ADP,ATP carrier-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 593
Score = 176 bits (89), Expect = 2e-042
Identities = 143/161 (88%)
Strand = Plus / Minus
Query: 1011 gcaccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaaccatccctg 1070
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 490 gcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctg 431
Query: 1071 tccttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaagcctga 1130
|| |||||||| || || || ||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 430 tctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctga 371
Query: 1131 gtagggaagtaacgaataacattagcagtgttacccctcca 1171
|| || || ||||| |||||||| |||||||| || |||||
Sbjct: 370 gtgggaaaataacggataacatttgcagtgtttcctctcca 330
>gb|BQ633964.1|BQ633964 NXRV063_A07_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV063_A07 5' similar to Arabidopsis thaliana
sequence At3g08580 adenylate translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 675
Score = 176 bits (89), Expect = 2e-042
Identities = 143/161 (88%)
Strand = Plus / Minus
Query: 1011 gcaccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaaccatccctg 1070
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 494 gcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctg 435
Query: 1071 tccttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaagcctga 1130
|| |||||||| || || || ||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 434 tctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctga 375
Query: 1131 gtagggaagtaacgaataacattagcagtgttacccctcca 1171
|| || || ||||| |||||||| |||||||| || |||||
Sbjct: 374 gtgggaaaataacggataacatttgcagtgtttcctctcca 334
>gb|BQ634246.1|BQ634246 NXRV066_E11_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV066_E11 5' similar to Arabidopsis thaliana
sequence At5g13490 adenosine nucleotide translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 756
Score = 176 bits (89), Expect = 2e-042
Identities = 143/161 (88%)
Strand = Plus / Minus
Query: 1011 gcaccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaaccatccctg 1070
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 494 gcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctg 435
Query: 1071 tccttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaagcctga 1130
|| |||||||| || || || ||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 434 tctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctga 375
Query: 1131 gtagggaagtaacgaataacattagcagtgttacccctcca 1171
|| || || ||||| |||||||| |||||||| || |||||
Sbjct: 374 gtgggaaaataacggataacatttgcagtgtttcctctcca 334
>gb|BQ634282.1|BQ634282 NXRV067_A02_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV067_A02 5' similar to Arabidopsis thaliana
sequence At5g13490 adenosine nucleotide translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 727
Score = 176 bits (89), Expect = 2e-042
Identities = 143/161 (88%)
Strand = Plus / Minus
Query: 1011 gcaccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaaccatccctg 1070
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 494 gcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctg 435
Query: 1071 tccttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaagcctga 1130
|| |||||||| || || || ||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 434 tctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctga 375
Query: 1131 gtagggaagtaacgaataacattagcagtgttacccctcca 1171
|| || || ||||| |||||||| |||||||| || |||||
Sbjct: 374 gtgggaaaataacggataacatttgcagtgtttcctctcca 334
>gb|BQ634283.1|BQ634283 NXRV067_A03_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV067_A03 5' similar to Arabidopsis thaliana
sequence At5g13490 adenosine nucleotide translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 717
Score = 176 bits (89), Expect = 2e-042
Identities = 143/161 (88%)
Strand = Plus / Minus
Query: 1011 gcaccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaaccatccctg 1070
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 494 gcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctg 435
Query: 1071 tccttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaagcctga 1130
|| |||||||| || || || ||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 434 tctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctga 375
Query: 1131 gtagggaagtaacgaataacattagcagtgttacccctcca 1171
|| || || ||||| |||||||| |||||||| || |||||
Sbjct: 374 gtgggaaaataacggataacatttgcagtgtttcctctcca 334
>gb|BQ634365.1|BQ634365 NXRV068_A11_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV068_A11 5' similar to Arabidopsis thaliana
sequence At4g28390 ADP,ATP carrier-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 564
Score = 176 bits (89), Expect = 2e-042
Identities = 143/161 (88%)
Strand = Plus / Minus
Query: 1011 gcaccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaaccatccctg 1070
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 493 gcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctg 434
Query: 1071 tccttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaagcctga 1130
|| |||||||| || || || ||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 433 tctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctga 374
Query: 1131 gtagggaagtaacgaataacattagcagtgttacccctcca 1171
|| || || ||||| |||||||| |||||||| || |||||
Sbjct: 373 gtgggaaaataacggataacatttgcagtgtttcctctcca 333
>gb|BQ634416.1|BQ634416 NXRV068_F08_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV068_F08 5' similar to Arabidopsis thaliana
sequence At4g28390 ADP,ATP carrier-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 568
Score = 176 bits (89), Expect = 2e-042
Identities = 143/161 (88%)
Strand = Plus / Minus
Query: 1011 gcaccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaaccatccctg 1070
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 494 gcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctg 435
Query: 1071 tccttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaagcctga 1130
|| |||||||| || || || ||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 434 tctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctga 375
Query: 1131 gtagggaagtaacgaataacattagcagtgttacccctcca 1171
|| || || ||||| |||||||| |||||||| || |||||
Sbjct: 374 gtgggaaaataacggataacatttgcagtgtttcctctcca 334
>gb|BQ634437.1|BQ634437 NXRV068_H09_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV068_H09 5' similar to Arabidopsis thaliana
sequence At3g08580 adenylate translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 591
Score = 176 bits (89), Expect = 2e-042
Identities = 143/161 (88%)
Strand = Plus / Minus
Query: 1011 gcaccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaaccatccctg 1070
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 494 gcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctg 435
Query: 1071 tccttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaagcctga 1130
|| |||||||| || || || ||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 434 tctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctga 375
Query: 1131 gtagggaagtaacgaataacattagcagtgttacccctcca 1171
|| || || ||||| |||||||| |||||||| || |||||
Sbjct: 374 gtgggaaaataacggataacatttgcagtgtttcctctcca 334
>gb|BQ634579.1|BQ634579 NXRV070_F11_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV070_F11 5' similar to Arabidopsis thaliana
sequence At5g13490 adenosine nucleotide translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 717
Score = 176 bits (89), Expect = 2e-042
Identities = 143/161 (88%)
Strand = Plus / Minus
Query: 1011 gcaccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaaccatccctg 1070
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 494 gcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctg 435
Query: 1071 tccttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaagcctga 1130
|| |||||||| || || || ||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 434 tctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctga 375
Query: 1131 gtagggaagtaacgaataacattagcagtgttacccctcca 1171
|| || || ||||| |||||||| |||||||| || |||||
Sbjct: 374 gtgggaaaataacggataacatttgcagtgtttcctctcca 334
>gb|BQ634588.1|BQ634588 NXRV070_G09_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV070_G09 5' similar to Arabidopsis thaliana
sequence At3g08580 adenylate translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 740
Score = 176 bits (89), Expect = 2e-042
Identities = 143/161 (88%)
Strand = Plus / Minus
Query: 1011 gcaccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaaccatccctg 1070
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 494 gcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctg 435
Query: 1071 tccttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaagcctga 1130
|| |||||||| || || || ||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 434 tctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctga 375
Query: 1131 gtagggaagtaacgaataacattagcagtgttacccctcca 1171
|| || || ||||| |||||||| |||||||| || |||||
Sbjct: 374 gtgggaaaataacggataacatttgcagtgtttcctctcca 334
>gb|BQ634601.1|BQ634601 NXRV070_H12_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV070_H12 5' similar to Arabidopsis thaliana
sequence At5g13490 adenosine nucleotide translocator see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 699
Score = 176 bits (89), Expect = 2e-042
Identities = 143/161 (88%)
Strand = Plus / Minus
Query: 1011 gcaccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaaccatccctg 1070
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 494 gcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctg 435
Query: 1071 tccttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaagcctga 1130
|| |||||||| || || || ||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 434 tctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctga 375
Query: 1131 gtagggaagtaacgaataacattagcagtgttacccctcca 1171
|| || || ||||| |||||||| |||||||| || |||||
Sbjct: 374 gtgggaaaataacggataacatttgcagtgtttcctctcca 334
>gb|BQ634688.1|BQ634688 NXRV072_A09_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV072_A09 5' similar to Arabidopsis thaliana
sequence At4g28390 ADP,ATP carrier-like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence
Length = 623
Score = 176 bits (89), Expect = 2e-042
Identities = 143/161 (88%)
Strand = Plus / Minus
Query: 1011 gcaccagcagcaccaccagaggccaggttgccagcaaaccacttccagtaaccatccctg 1070
|||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 494 gcaccagctgcaccaccagaggccaggtttccagcaaaccatttccagtaaccatccctg 435
Query: 1071 tccttcttgaagttgaacagcctcttgaagtagtccttaaacgcaaagttcaaagcctga 1130
|| |||||||| || || || ||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 434 tctttcttgaaattaaagagtctcttaaagtaatccttgaacgcaaagttcaaagcctga 375
Query: 1131 gtagggaagtaacgaataacattagcagtgttacccctcca 1171
|| || || ||||| |||||||| |||||||| || |||||
Sbjct: 374 gtgggaaaataacggataacatttgcagtgtttcctctcca 334
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 247,014
Number of Sequences: 355925
Number of extensions: 247014
Number of successful extensions: 65663
Number of sequences better than 0.5: 299
Number of HSP's better than 0.5 without gapping: 298
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 64984
Number of HSP's gapped (non-prelim): 664
length of query: 1721
length of database: 217,277,237
effective HSP length: 20
effective length of query: 1701
effective length of database: 210,158,737
effective search space: 357480011637
effective search space used: 357480011637
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)