BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.149
(1197 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF389831.1|CF389831 RTDR2_5_A07.g1_A021 Loblolly pine ro... 133 2e-029
gb|BX252327.1|BX252327 BX252327 Pinus pinaster differenciat... 125 4e-027
gb|CF668776.1|CF668776 RTCNT1_38_C12.g1_A029 Root control P... 125 4e-027
gb|CF671228.1|CF671228 RTCNT1_55_D09.g1_A029 Root control P... 125 4e-027
gb|CF671371.1|CF671371 RTCNT1_56_D08.g1_A029 Root control P... 125 4e-027
gb|CV033978.1|CV033978 RTNACL1_37_F10.g1_A029 Roots plus ad... 125 4e-027
gb|CV034112.1|CV034112 RTNACL1_38_F04.g1_A029 Roots plus ad... 125 4e-027
gb|CX653138.1|CX653138 COLD1_63_D07.g1_A029 Root cold Pinus... 125 4e-027
gb|DR024573.1|DR024573 STRS1_65_H07.g1_A034 Shoot tip pitch... 125 4e-027
gb|DR053863.1|DR053863 RTCA1_13_F11.g1_A029 Roots minus cal... 125 4e-027
gb|DR060162.1|DR060162 RTNIT1_26_D01.b1_A029 Roots minus ni... 125 4e-027
gb|DR117556.1|DR117556 RTMG1_7_E04.g1_A029 Roots minus magn... 125 4e-027
gb|CF668696.1|CF668696 RTCNT1_38_C12.b1_A029 Root control P... 119 3e-025
gb|CF395949.1|CF395949 RTDS2_19_E08.g1_A021 Drought-stresse... 117 1e-024
gb|CO172782.1|CO172782 NDL1_31_G11.g1_A029 Needles control ... 117 1e-024
gb|CO172793.1|CO172793 NDL1_31_H11.g1_A029 Needles control ... 117 1e-024
gb|DR070733.1|DR070733 RTDK1_15_F04.b1_A029 Roots, dark Pin... 117 1e-024
gb|DR110262.1|DR110262 RTS1_9_H01.g1_A029 Roots minus sulfu... 117 1e-024
gb|DR388204.1|DR388204 RTHG1_26_F09.g1_A029 Roots plus adde... 111 7e-023
gb|CF476920.1|CF476920 RTWW3_4_G05.g1_A022 Well-watered lob... 109 3e-022
gb|CF479652.1|CF479652 RTWW3_11_H01.g1_A022 Well-watered lo... 109 3e-022
gb|CO161525.1|CO161525 FLD1_29_A01.g1_A029 Root flooded Pin... 109 3e-022
gb|CO167361.1|CO167361 FLD1_68_B02.g1_A029 Root flooded Pin... 109 3e-022
gb|CO197228.1|CO197228 GEO1_4_F03.g1_A029 Root gravitropism... 109 3e-022
gb|CO199992.1|CO199992 GEO2_4_F10.g1_A032 Root gravitropism... 109 3e-022
gb|CO363124.1|CO363124 RTK1_7_F09.g1_A029 Roots minus potas... 109 3e-022
gb|CO366062.1|CO366062 RTK1_20_H12.g1_A029 Roots minus pota... 109 3e-022
gb|CX646886.1|CX646886 COLD1_12_D06.b1_A029 Root cold Pinus... 109 3e-022
gb|CX647525.1|CX647525 COLD1_17_H02.b1_A029 Root cold Pinus... 109 3e-022
gb|CX652981.1|CX652981 COLD1_62_D12.g1_A029 Root cold Pinus... 109 3e-022
gb|CX716004.1|CX716004 RTPQ1_39_B07.g1_A032 Roots treated w... 109 3e-022
gb|DR019661.1|DR019661 STRS1_31_C04.g1_A034 Shoot tip pitch... 109 3e-022
gb|DR048300.1|DR048300 RTBOR1_7_G08.g2_A029 Roots plus adde... 109 3e-022
gb|DR055615.1|DR055615 RTCA1_24_F12.g2_A029 Roots minus cal... 109 3e-022
gb|DR060882.1|DR060882 RTNIT1_30_D04.g1_A029 Roots minus ni... 109 3e-022
gb|DR078062.1|DR078062 RTFEPL1_1_E06.g1_A029 Roots plus add... 109 3e-022
gb|DR080221.1|DR080221 RTFEPL1_21_E08.b1_A029 Roots plus ad... 109 3e-022
gb|DR088815.1|DR088815 RTAL1_4_F02.g1_A029 Roots plus added... 109 3e-022
gb|DR090386.1|DR090386 RTAL1_14_E07.g1_A029 Roots plus adde... 109 3e-022
gb|DR117351.1|DR117351 RTMG1_6_A07.g1_A029 Roots minus magn... 109 3e-022
gb|DR165494.1|DR165494 RTPHOS1_5_A07.g1_A029 Roots minus ph... 109 3e-022
gb|DR166061.1|DR166061 RTPHOS1_9_C12.b2_A029 Roots minus ph... 109 3e-022
gb|DR166370.1|DR166370 RTPHOS1_11_B03.g2_A029 Roots minus p... 109 3e-022
gb|DR168745.1|DR168745 RTPHOS1_27_C04.g1_A029 Roots minus p... 109 3e-022
gb|DR169077.1|DR169077 RTPHOS1_29_G12.g1_A029 Roots minus p... 109 3e-022
gb|DR182083.1|DR182083 RTMNUT1_42_F12.g1_A029 Roots minus m... 109 3e-022
gb|DR385739.1|DR385739 RTHG1_10_C02.g1_A029 Roots plus adde... 109 3e-022
gb|DR745312.1|DR745312 RTCU1_28_B03.g1_A029 Roots plus adde... 109 3e-022
gb|AW043049.1|AW043049 ST28F06 Pine TriplEx shoot tip libra... 105 4e-021
gb|AW043210.1|AW043210 ST30F04 Pine TriplEx shoot tip libra... 105 4e-021
gb|BF049808.1|BF049808 NXCI_111_A05_F NXCI (Nsf Xylem Compr... 105 4e-021
gb|AW981692.1|AW981692 PC15E12 Pine TriplEx pollen cone lib... 103 2e-020
gb|BF517263.1|BF517263 NXSI_012_D01_F NXSI (Nsf Xylem Side ... 103 2e-020
gb|BQ703100.1|BQ703100 NXSI_136_D11_F NXSI (Nsf Xylem Side ... 103 2e-020
gb|CR392643.1|CR392643 CR392643 RN Pinus pinaster cDNA clon... 103 2e-020
gb|CO364837.1|CO364837 RTK1_22_C09.b1_A029 Roots minus pota... 103 2e-020
gb|DR022067.1|DR022067 STRS1_48_D10.g1_A034 Shoot tip pitch... 103 2e-020
gb|DR165985.1|DR165985 RTPHOS1_8_C06.g1_A029 Roots minus ph... 103 2e-020
gb|BM367526.1|BM367526 NXLV_050_E05_F NXLV (Nsf Xylem Late ... 96 4e-018
gb|CX646968.1|CX646968 COLD1_12_D06.g1_A029 Root cold Pinus... 96 4e-018
gb|DR060807.1|DR060807 RTNIT1_30_D04.b1_A029 Roots minus ni... 96 4e-018
gb|DR117270.1|DR117270 RTMG1_6_A07.b1_A029 Roots minus magn... 96 4e-018
gb|AW043003.1|AW043003 ST28A12 Pine TriplEx shoot tip libra... 94 2e-017
gb|BX251527.1|BX251527 BX251527 Pinus pinaster differenciat... 94 2e-017
gb|CD025328.1|CD025328 NXSI_044_B12_F NXSI (Nsf Xylem Side ... 88 1e-015
gb|CO199912.1|CO199912 GEO2_4_F10.b1_A032 Root gravitropism... 88 1e-015
gb|DR052213.1|DR052213 RTCA1_3_D06.b1_A029 Roots minus calc... 88 1e-015
gb|AW225680.1|AW225680 ST70C06 Pine TriplEx shoot tip libra... 82 6e-014
gb|BG039240.1|BG039240 NXSI_096_F01_F NXSI (Nsf Xylem Side ... 82 6e-014
gb|DR024499.1|DR024499 STRS1_65_H07.b1_A034 Shoot tip pitch... 82 6e-014
gb|DR181997.1|DR181997 RTMNUT1_42_F12.b1_A029 Roots minus m... 82 6e-014
gb|AW056674.1|AW056674 ST54D10 Pine TriplEx shoot tip libra... 80 2e-013
gb|AW755131.1|AW755131 PC11C10 Pine TriplEx pollen cone lib... 80 2e-013
gb|BF610106.1|BF610106 NXSI_054_G09_F NXSI (Nsf Xylem Side ... 80 2e-013
gb|BG039067.1|BG039067 NXSI_092_D03_F NXSI (Nsf Xylem Side ... 80 2e-013
gb|BQ695719.1|BQ695719 NXPV_031_G12_F NXPV (Nsf Xylem Plani... 80 2e-013
gb|DR052286.1|DR052286 RTCA1_3_D06.g1_A029 Roots minus calc... 80 2e-013
gb|BF186189.1|BF186189 NXCI_131_D10_F NXCI (Nsf Xylem Compr... 76 4e-012
gb|DR385663.1|DR385663 RTHG1_10_C02.b1_A029 Roots plus adde... 76 4e-012
gb|AW225749.1|AW225749 ST71D03 Pine TriplEx shoot tip libra... 74 1e-011
gb|BF169512.1|BF169512 NXCI_120_E09_F NXCI (Nsf Xylem Compr... 74 1e-011
gb|CX712633.1|CX712633 RTPQ1_3_E12.g1_A032 Roots treated wi... 74 1e-011
gb|CO161460.1|CO161460 FLD1_29_A01.b1_A029 Root flooded Pin... 72 6e-011
gb|CX652895.1|CX652895 COLD1_62_D12.b1_A029 Root cold Pinus... 72 6e-011
gb|BG832585.1|BG832585 NXPV_076_G10_F NXPV (Nsf Xylem Plani... 70 2e-010
gb|CD022945.1|CD022945 NXPV_096_C11_F NXPV (Nsf Xylem Plani... 70 2e-010
gb|DR743465.1|DR743465 RTCU1_16_B08.b1_A029 Roots plus adde... 64 1e-008
gb|DR102517.1|DR102517 STRR1_81_E07.g1_A033 Stem Response R... 62 6e-008
gb|DR019559.1|DR019559 STRS1_30_H02.g1_A034 Shoot tip pitch... 58 9e-007
gb|AL750215.1|AL750215 AL750215 AS Pinus pinaster cDNA clon... 54 1e-005
gb|CO365978.1|CO365978 RTK1_20_H12.b1_A029 Roots minus pota... 52 5e-005
gb|CX653056.1|CX653056 COLD1_63_D07.b1_A029 Root cold Pinus... 52 5e-005
gb|CX715969.1|CX715969 RTPQ1_39_B07.b1_A032 Roots treated w... 52 5e-005
gb|DR019481.1|DR019481 STRS1_30_H02.b1_A034 Shoot tip pitch... 52 5e-005
gb|DR077983.1|DR077983 RTFEPL1_1_E06.b1_A029 Roots plus add... 52 5e-005
gb|DR090309.1|DR090309 RTAL1_14_E07.b1_A029 Roots plus adde... 52 5e-005
gb|DR101765.1|DR101765 STRR1_75_D08.g1_A033 Stem Response R... 52 5e-005
gb|DR160122.1|DR160122 RTFE1_3_H02.g1_A029 Roots minus iron... 52 5e-005
gb|DR169007.1|DR169007 RTPHOS1_29_G12.b1_A029 Roots minus p... 52 5e-005
gb|CD016014.1|CD016014 NXCI_009_C02_F NXCI (Nsf Xylem Compr... 46 0.003
gb|CD023175.1|CD023175 NXPV_102_B05_F NXPV (Nsf Xylem Plani... 46 0.003
gb|DR110172.1|DR110172 RTS1_9_H01.b1_A029 Roots minus sulfu... 44 0.013
>gb|CF389831.1|CF389831 RTDR2_5_A07.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_5_A07_A021 5', mRNA
sequence
Length = 732
Score = 133 bits (67), Expect = 2e-029
Identities = 256/319 (80%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 524 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 465
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| |||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 464 cgcaaaccgtagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 405
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || |||||||| || ||||||||||| |||| ||| ||||| || || |||||
Sbjct: 404 ttgcggaccagggatctaagcttatcagtggtgaaatccattccccagaaattagtgagg 345
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| ||||| ||||| || ||||| ||| |||| || |||||||||||||| ||
Sbjct: 344 acattccttccctgaacatcctctgcacgaagcttgatctttctgtaagcttgatcttca 285
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 284 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 225
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 224 atcttagtaccctgagtcc 206
Score = 103 bits (52), Expect = 2e-020
Identities = 82/92 (89%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||||||||| ||||| |||||||| | ||| |||||||| ||||||||||||
Sbjct: 149 tcataccaatccttctttgagaaggggtcgacagccttcttcttgcctcccttctttccc 90
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | ||||||||| |||||||||||
Sbjct: 89 ttggatatgcgcttgttcttcccgacagccat 58
>gb|BX252327.1|BX252327 BX252327 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP062H10 similar to 40S RIBOSOMAL PROTEIN
S3A, mRNA sequence
Length = 733
Score = 125 bits (63), Expect = 4e-027
Identities = 255/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 563 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 504
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 503 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 444
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || |||||||| || ||||||||||| |||| ||| ||||| || || |||||
Sbjct: 443 ttgcggaccagggatctaagcttatcagtggtgaaatccattccccagaaattagtgagg 384
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| ||||| ||||| || ||||| ||| |||| || |||||||||||||| ||
Sbjct: 383 acattccttccctgaacatcctctgcacgaagcttgatctttctgtaagcttgatcttca 324
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 323 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 264
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 263 atcttagtaccctgagtcc 245
Score = 103 bits (52), Expect = 2e-020
Identities = 82/92 (89%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||||||||| ||||| |||||||| | ||| |||||||| ||||||||||||
Sbjct: 188 tcataccaatccttctttgagaaggggtcgacagccttcttcttgcctcccttctttccc 129
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | ||||||||| |||||||||||
Sbjct: 128 ttggatatgcgcttgttcttcccgacagccat 97
>gb|CF668776.1|CF668776 RTCNT1_38_C12.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_38_C12_A029 5', mRNA sequence
Length = 792
Score = 125 bits (63), Expect = 4e-027
Identities = 255/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 536 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 477
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 476 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 417
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || |||||||| || ||||||||||| |||| ||| ||||| || || |||||
Sbjct: 416 ttgcggaccagggatctaagcttatcagtggtgaaatccattccccagaaattagtgagg 357
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| ||||| ||||| || ||||| ||| |||| || |||||||||||||| ||
Sbjct: 356 acattccttccctgaacatcctctgcacgaagcttgatctttctgtaagcttgatcttca 297
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 296 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagtccttcagatgca 237
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 236 atcttagtaccctgagtcc 218
Score = 103 bits (52), Expect = 2e-020
Identities = 82/92 (89%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||||||||| ||||| |||||||| | ||| |||||||| ||||||||||||
Sbjct: 161 tcataccaatccttctttgagaaggggtcgacagccttcttcttgcctcccttctttccc 102
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | ||||||||| |||||||||||
Sbjct: 101 ttggatatgcgcttgttcttcccgacagccat 70
>gb|CF671228.1|CF671228 RTCNT1_55_D09.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_55_D09_A029 5', mRNA sequence
Length = 665
Score = 125 bits (63), Expect = 4e-027
Identities = 255/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 553 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 494
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 493 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 434
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || |||||||| || ||||||||||| |||| ||| ||||| || || |||||
Sbjct: 433 ttgcggaccagggatctaagcttatcagtggtgaaatccattccccagaaattagtgagg 374
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| ||||| ||||| || ||||| ||| |||| || |||||||||||||| ||
Sbjct: 373 acattccttccctgaacatcctctgcacgaagcttgatctttctgtaagcttgatcttca 314
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 313 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagtccttcagatgca 254
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 253 atcttagtaccctgagtcc 235
Score = 103 bits (52), Expect = 2e-020
Identities = 82/92 (89%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||||||||| ||||| |||||||| | ||| |||||||| ||||||||||||
Sbjct: 178 tcataccaatccttctttgagaaggggtcgacagccttcttcttgcctcccttctttccc 119
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | ||||||||| |||||||||||
Sbjct: 118 ttggatatgcgcttgttcttcccgacagccat 87
>gb|CF671371.1|CF671371 RTCNT1_56_D08.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_56_D08_A029 5', mRNA sequence
Length = 743
Score = 125 bits (63), Expect = 4e-027
Identities = 255/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 580 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 521
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 520 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 461
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || |||||||| || ||||||||||| |||| ||| ||||| || || |||||
Sbjct: 460 ttgcggaccagggatctaagcttatcagtggtgaaatccattccccagaaattagtgagg 401
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| ||||| ||||| || ||||| ||| |||| || |||||||||||||| ||
Sbjct: 400 acattccttccctgaacatcctctgcacgaagcttgatctttctgtaagcttgatcttca 341
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 340 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagtccttcagatgca 281
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 280 atcttagtaccctgagtcc 262
Score = 103 bits (52), Expect = 2e-020
Identities = 82/92 (89%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||||||||| ||||| |||||||| | ||| |||||||| ||||||||||||
Sbjct: 205 tcataccaatccttctttgagaaggggtcgacagccttcttcttgcctcccttctttccc 146
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | ||||||||| |||||||||||
Sbjct: 145 ttggatatgcgcttgttcttcccgacagccat 114
>gb|CV033978.1|CV033978 RTNACL1_37_F10.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_37_F10_A029 5', mRNA sequence
Length = 741
Score = 125 bits (63), Expect = 4e-027
Identities = 255/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 554 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 495
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 494 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 435
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || |||||||| || ||||||||||| |||| ||| ||||| || || |||||
Sbjct: 434 ttgcggaccagggatctaagcttatcagtggtgaaatccattccccagaaattagtgagg 375
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| ||||| ||||| || ||||| ||| |||| || |||||||||||||| ||
Sbjct: 374 acattccttccctgaacatcctctgcacgaagcttgatctttctgtaagcttgatcttca 315
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 314 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagtccttcagatgca 255
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 254 atcttagtaccctgagtcc 236
Score = 103 bits (52), Expect = 2e-020
Identities = 82/92 (89%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||||||||| ||||| |||||||| | ||| |||||||| ||||||||||||
Sbjct: 179 tcataccaatccttctttgagaaggggtcgacagccttcttcttgcctcccttctttccc 120
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | ||||||||| |||||||||||
Sbjct: 119 ttggatatgcgcttgttcttcccgacagccat 88
>gb|CV034112.1|CV034112 RTNACL1_38_F04.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_38_F04_A029 5', mRNA sequence
Length = 823
Score = 125 bits (63), Expect = 4e-027
Identities = 255/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 385 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 326
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 325 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 266
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || |||||||| || ||||||||||| |||| ||| ||||| || || |||||
Sbjct: 265 ttgcggaccagggatctaagcttatcagtggtgaaatccattccccagaaattagtgagg 206
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| ||||| ||||| || ||||| ||| |||| || |||||||||||||| ||
Sbjct: 205 acattccttccctgaacatcctctgcacgaagcttgatctttctgtaagcttgatcttca 146
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 145 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagtccttcagatgca 86
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 85 atcttagtaccctgagtcc 67
>gb|CX653138.1|CX653138 COLD1_63_D07.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_63_D07_A029 5', mRNA sequence
Length = 718
Score = 125 bits (63), Expect = 4e-027
Identities = 255/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 576 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 517
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 516 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 457
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || |||||||| || ||||||||||| |||| ||| ||||| || || |||||
Sbjct: 456 ttgcggaccagggatctaagcttatcagtggtgaaatccattccccagaaattagtgagg 397
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| ||||| ||||| || ||||| ||| |||| || |||||||||||||| ||
Sbjct: 396 acattccttccctgaacatcctctgcacgaagcttgatctttctgtaagcttgatcttca 337
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 336 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagtccttcagatgca 277
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 276 atcttagtaccctgagtcc 258
Score = 103 bits (52), Expect = 2e-020
Identities = 82/92 (89%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||||||||| ||||| |||||||| | ||| |||||||| ||||||||||||
Sbjct: 201 tcataccaatccttctttgagaaggggtcgacagccttcttcttgcctcccttctttccc 142
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | ||||||||| |||||||||||
Sbjct: 141 ttggatatgcgcttgttcttcccgacagccat 110
>gb|DR024573.1|DR024573 STRS1_65_H07.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_65_H07_A034 5', mRNA sequence
Length = 656
Score = 125 bits (63), Expect = 4e-027
Identities = 255/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 504 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 445
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 444 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 385
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || |||||||| || ||||||||||| |||| ||| ||||| || || |||||
Sbjct: 384 ttgcggaccagggatctaagcttatcagtggtgaaatccattccccagaaattagtgagg 325
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| ||||| ||||| || ||||| ||| |||| || |||||||||||||| ||
Sbjct: 324 acattccttccctgaacatcctctgcacgaagcttgatctttctgtaagcttgatcttca 265
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 264 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagtccttcagatgca 205
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 204 atcttagtaccctgagtcc 186
Score = 103 bits (52), Expect = 2e-020
Identities = 82/92 (89%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||||||||| ||||| |||||||| | ||| |||||||| ||||||||||||
Sbjct: 129 tcataccaatccttctttgagaaggggtcgacagccttcttcttgcctcccttctttccc 70
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | ||||||||| |||||||||||
Sbjct: 69 ttggatatgcgcttgttcttcccgacagccat 38
>gb|DR053863.1|DR053863 RTCA1_13_F11.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_13_F11_A029 5', mRNA sequence
Length = 614
Score = 125 bits (63), Expect = 4e-027
Identities = 255/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 488 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 429
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 428 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 369
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || |||||||| || ||||||||||| |||| ||| ||||| || || |||||
Sbjct: 368 ttgcggaccagggatctaagcttatcagtggtgaaatccattccccagaaattagtgagg 309
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| ||||| ||||| || ||||| ||| |||| || |||||||||||||| ||
Sbjct: 308 acattccttccctgaacatcctctgcacgaagcttgatctttctgtaagcttgatcttca 249
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 248 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagtccttcagatgca 189
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 188 atcttagtaccctgagtcc 170
Score = 95.6 bits (48), Expect = 4e-018
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||||||||| |||| |||||||| | ||| |||||||| ||||||||||||
Sbjct: 113 tcataccaatccttctttaagaaggggtcgacagccttcttcttgcctcccttctttccc 54
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | ||||||||| |||||||||||
Sbjct: 53 ttggatatgcgcttgttcttcccgacagccat 22
>gb|DR060162.1|DR060162 RTNIT1_26_D01.b1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_26_D01_A029 3', mRNA sequence
Length = 796
Score = 125 bits (63), Expect = 4e-027
Identities = 255/319 (79%)
Strand = Plus / Plus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 295 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 354
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 355 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 414
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || |||||||| || ||||||||||| |||| ||| ||||| || || |||||
Sbjct: 415 ttgcggaccagggatctaagcttatcagtggtgaaatccattccccagaaattagtgagg 474
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| ||||| ||||| || ||||| ||| |||| || |||||||||||||| ||
Sbjct: 475 acattccttccctgaacatcctctgcacgaagcttgatctttctgtaagcttgatcttca 534
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 535 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagtccttcagatgca 594
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 595 atcttagtaccctgagtcc 613
Score = 103 bits (52), Expect = 2e-020
Identities = 82/92 (89%)
Strand = Plus / Plus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||||||||| ||||| |||||||| | ||| |||||||| ||||||||||||
Sbjct: 670 tcataccaatccttctttgagaaggggtcgacagccttcttcttgcctcccttctttccc 729
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | ||||||||| |||||||||||
Sbjct: 730 ttggatatgcgcttgttcttcccgacagccat 761
>gb|DR117556.1|DR117556 RTMG1_7_E04.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_7_E04_A029 5', mRNA sequence
Length = 898
Score = 125 bits (63), Expect = 4e-027
Identities = 255/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 469 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 410
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 409 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 350
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || |||||||| || ||||||||||| |||| ||| ||||| || || |||||
Sbjct: 349 ttgcggaccagggatctaagcttatcagtggtgaaatccattccccagaaattagtgagg 290
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| ||||| ||||| || ||||| ||| |||| || |||||||||||||| ||
Sbjct: 289 acattccttccctgaacatcctctgcacgaagcttgatctttctgtaagcttgatcttca 230
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 229 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagtccttcagatgca 170
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 169 atcttagtaccctgagtcc 151
Score = 103 bits (52), Expect = 2e-020
Identities = 82/92 (89%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||||||||| ||||| |||||||| | ||| |||||||| ||||||||||||
Sbjct: 94 tcataccaatccttctttgagaaggggtcgacagccttcttcttgcctcccttctttccc 35
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | ||||||||| |||||||||||
Sbjct: 34 ttggatatgcgcttgttcttcccgacagccat 3
>gb|CF668696.1|CF668696 RTCNT1_38_C12.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_38_C12_A029 3', mRNA sequence
Length = 720
Score = 119 bits (60), Expect = 3e-025
Identities = 219/272 (80%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 308 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 249
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 248 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 189
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || |||||||| || ||||||||||| |||| ||| ||||| || || |||||
Sbjct: 188 ttgcggaccagggatctaagcttatcagtggtgaaatccattccccagaaattagtgagg 129
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| ||||| ||||| || ||||| ||| |||| || |||||||||||||| ||
Sbjct: 128 acattccttccctgaacatcctctgcacgaagcttgatctttctgtaagcttgatcttca 69
Query: 861 tcgccctgaagatcagctaggcaaacctcaaa 892
|| ||||||||||||||| ||||||||||
Sbjct: 68 tcattctgaagatcagctagtgaaacctcaaa 37
>gb|CF395949.1|CF395949 RTDS2_19_E08.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_19_E08_A021 5', mRNA sequence
Length = 650
Score = 117 bits (59), Expect = 1e-024
Identities = 254/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 628 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 569
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 568 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 509
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || |||||||| || ||||||||||| |||| ||| ||||| || || ||| |
Sbjct: 508 ttgcggaccagggatctaagcttatcagtggtgaaatccattccccagaaattagtgcgg 449
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| ||||| ||||| || ||||| ||| |||| || |||||||||||||| ||
Sbjct: 448 acattccttccctgaacatcctctgcacgaagcttgatctttctgtaagcttgatcttca 389
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 388 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagtccttcagatgca 329
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 328 atcttagtaccctgagtcc 310
Score = 103 bits (52), Expect = 2e-020
Identities = 82/92 (89%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||||||||| ||||| |||||||| | ||| |||||||| ||||||||||||
Sbjct: 253 tcataccaatccttctttgagaaggggtcgacagccttcttcttgcctcccttctttccc 194
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | ||||||||| |||||||||||
Sbjct: 193 ttggatatgcgcttgttcttcccgacagccat 162
>gb|CO172782.1|CO172782 NDL1_31_G11.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_31_G11_A029 5', mRNA sequence
Length = 761
Score = 117 bits (59), Expect = 1e-024
Identities = 254/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||| | |
Sbjct: 594 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaaaata 535
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 534 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 475
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || |||||||| || ||||||||||| |||| ||| ||||| || || |||||
Sbjct: 474 ttgcggaccagggatctaagcttatcagtggtgaaatccattccccagaaattagtgagg 415
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| ||||| ||||| || ||||| ||| |||| || |||||||||||||| ||
Sbjct: 414 acattccttccctgaacatcctctgcacgaagcttgatctttctgtaagcttgatcttca 355
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 354 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagtccttcagatgca 295
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 294 atcttagtaccctgagtcc 276
Score = 103 bits (52), Expect = 2e-020
Identities = 82/92 (89%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||||||||| ||||| |||||||| | ||| |||||||| ||||||||||||
Sbjct: 219 tcataccaatccttctttgagaaggggtcgacagccttcttcttgcctcccttctttccc 160
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | ||||||||| |||||||||||
Sbjct: 159 ttggatatgcgcttgttcttcccgacagccat 128
>gb|CO172793.1|CO172793 NDL1_31_H11.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_31_H11_A029 5', mRNA sequence
Length = 710
Score = 117 bits (59), Expect = 1e-024
Identities = 254/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||| | |
Sbjct: 595 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaaaata 536
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 535 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 476
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || |||||||| || ||||||||||| |||| ||| ||||| || || |||||
Sbjct: 475 ttgcggaccagggatctaagcttatcagtggtgaaatccattccccagaaattagtgagg 416
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| ||||| ||||| || ||||| ||| |||| || |||||||||||||| ||
Sbjct: 415 acattccttccctgaacatcctctgcacgaagcttgatctttctgtaagcttgatcttca 356
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 355 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagtccttcagatgca 296
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 295 atcttagtaccctgagtcc 277
Score = 103 bits (52), Expect = 2e-020
Identities = 82/92 (89%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||||||||| ||||| |||||||| | ||| |||||||| ||||||||||||
Sbjct: 220 tcataccaatccttctttgagaaggggtcgacagccttcttcttgcctcccttctttccc 161
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | ||||||||| |||||||||||
Sbjct: 160 ttggatatgcgcttgttcttcccgacagccat 129
>gb|DR070733.1|DR070733 RTDK1_15_F04.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_15_F04_A029 3', mRNA sequence
Length = 903
Score = 117 bits (59), Expect = 1e-024
Identities = 230/287 (80%)
Strand = Plus / Minus
Query: 653 cctcttggtgaagccgatgcagaacaaacgcaacatgtagttgtcggttgtcttgacatc 712
|||||| ||||| || |||||||||| |||||| ||||| || |||||||| |||||
Sbjct: 879 cctctttgtgaatccaatgcagaacatacgcaaaccatagttatctgttgtcttaacatc 820
Query: 713 aacatgggcttcgattaatgtctgccacttcttcactagggatctcagtttatcagtggt 772
|| || ||||| || || ||||||||||| || |||||||| || |||||||||||
Sbjct: 819 cacgtgagcttcaatcaaagtctgccacttgcggaccagggatctaagcttatcagtggt 760
Query: 773 aaaattcataccccaaaagtttgtgagcacattcctgccctgcacatcttcagcacggag 832
|||| ||| ||||| || || ||||| |||||||| ||||| ||||| || ||||| ||
Sbjct: 759 gaaatccattccccagaaattagtgaggacattccttccctgaacatcctctgcacgaag 700
Query: 833 cctgattttcctgtaagcttgatcctcgtcgccctgaagatcagctaggcaaacctcaaa 892
| |||| || |||||||||||||| || || ||||||||||||||| ||||||||||
Sbjct: 699 cttgatctttctgtaagcttgatcttcatcattctgaagatcagctagtgaaacctcaaa 640
Query: 893 gactctgtgcttcagaccctcagaagcaatcctggtaccctgtgtcc 939
|| | ||||| || || ||||| |||||| | |||||||| ||||
Sbjct: 639 cacacgatgcttaagtccttcagatgcaatcttagtaccctgagtcc 593
Score = 103 bits (52), Expect = 2e-020
Identities = 82/92 (89%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||||||||| ||||| |||||||| | ||| |||||||| ||||||||||||
Sbjct: 536 tcataccaatccttctttgagaaggggtcgacagccttcttcttgcctcccttctttccc 477
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | ||||||||| |||||||||||
Sbjct: 476 ttggatatgcgcttgttcttcccgacagccat 445
>gb|DR110262.1|DR110262 RTS1_9_H01.g1_A029 Roots minus sulfur Pinus taeda cDNA clone
RTS1_9_H01_A029 5', mRNA sequence
Length = 872
Score = 117 bits (59), Expect = 1e-024
Identities = 254/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||| | |
Sbjct: 415 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaaaata 356
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 355 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 296
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || |||||||| || ||||||||||| |||| ||| ||||| || || |||||
Sbjct: 295 ttgcggaccagggatctaagcttatcagtggtgaaatccattccccagaaattagtgagg 236
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| ||||| ||||| || ||||| ||| |||| || |||||||||||||| ||
Sbjct: 235 acattccttccctgaacatcctctgcacgaagcttgatctttctgtaagcttgatcttca 176
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 175 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagtccttcagatgca 116
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 115 atcttagtaccctgagtcc 97
>gb|DR388204.1|DR388204 RTHG1_26_F09.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_26_F09_A029 5', mRNA sequence
Length = 790
Score = 111 bits (56), Expect = 7e-023
Identities = 209/260 (80%)
Strand = Plus / Plus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 531 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 590
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 591 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 650
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || |||||||| || ||||||||||| |||| ||| ||||| || || |||||
Sbjct: 651 ttgcggaccagggatctaagcttatcagtggtgaaatccattccccagaaattagtgagg 710
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| ||||| ||||| || ||||| ||| |||| || |||||||||||||| ||
Sbjct: 711 acattccttccctgaacatcctctgcacgaagcttgatctttctgtaagcttgatcttca 770
Query: 861 tcgccctgaagatcagctag 880
|| |||||||||||||||
Sbjct: 771 tcattctgaagatcagctag 790
>gb|CF476920.1|CF476920 RTWW3_4_G05.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_4_G05_A022 5', mRNA sequence
Length = 605
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 445 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 386
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 385 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 326
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 325 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 266
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 265 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 206
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 205 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 146
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 145 atcttagtaccctgagtcc 127
Score = 65.9 bits (33), Expect = 4e-009
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||||| ||||||||||||
Sbjct: 70 tcataccaatctttctttgagaaggggtctacagcctttttcttgcctcccttctttccc 11
Query: 1056 t 1056
|
Sbjct: 10 t 10
>gb|CF479652.1|CF479652 RTWW3_11_H01.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_11_H01_A022 5', mRNA sequence
Length = 647
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 477 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 418
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 417 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 358
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 357 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 298
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 297 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 238
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 237 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 178
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 177 atcttagtaccctgagtcc 159
Score = 79.8 bits (40), Expect = 2e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||||| ||||||||||||
Sbjct: 102 tcataccaatctttctttgagaaggggtctacagcctttttcttgcctcccttctttccc 43
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | |||||||| ||||| |||||
Sbjct: 42 ttggatatgcgtttgttcttcccgacggccat 11
>gb|CO161525.1|CO161525 FLD1_29_A01.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_29_A01_A029 5', mRNA sequence
Length = 775
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 547 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 488
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 487 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 428
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 427 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 368
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 367 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 308
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 307 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 248
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 247 atcttagtaccctgagtcc 229
Score = 79.8 bits (40), Expect = 2e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||||| ||||||||||||
Sbjct: 172 tcataccaatctttctttgagaaggggtctacagcctttttcttgcctcccttctttccc 113
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | |||||||| ||||| |||||
Sbjct: 112 ttggatatgcgtttgttcttcccgacggccat 81
>gb|CO167361.1|CO167361 FLD1_68_B02.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_68_B02_A029 5', mRNA sequence
Length = 872
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 498 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 439
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 438 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 379
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 378 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 319
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 318 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 259
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 258 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 199
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 198 atcttagtaccctgagtcc 180
Score = 58.0 bits (29), Expect = 9e-007
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||| ||||||||||||
Sbjct: 123 tcataccaatctttctttgagaaggggtctacagcaattttcttgcctcccttctttccc 64
Query: 1056 ttgga 1060
|||||
Sbjct: 63 ttgga 59
>gb|CO197228.1|CO197228 GEO1_4_F03.g1_A029 Root gravitropism April 2003 test Pinus taeda
cDNA clone GEO1_4_F03_A029 5', mRNA sequence
Length = 678
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 509 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 450
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 449 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 390
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 389 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 330
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 329 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 270
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 269 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 210
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 209 atcttagtaccctgagtcc 191
Score = 79.8 bits (40), Expect = 2e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||||| ||||||||||||
Sbjct: 134 tcataccaatctttctttgagaaggggtctacagcctttttcttgcctcccttctttccc 75
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | |||||||| ||||| |||||
Sbjct: 74 ttggatatgcgtttgttcttcccgacggccat 43
>gb|CO199992.1|CO199992 GEO2_4_F10.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_4_F10_A032 5', mRNA sequence
Length = 611
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 502 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 443
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 442 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 383
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 382 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 323
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 322 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 263
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 262 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 203
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 202 atcttagtaccctgagtcc 184
Score = 79.8 bits (40), Expect = 2e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||||| ||||||||||||
Sbjct: 127 tcataccaatctttctttgagaaggggtctacagcctttttcttgcctcccttctttccc 68
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | |||||||| ||||| |||||
Sbjct: 67 ttggatatgcgtttgttcttcccgacggccat 36
>gb|CO363124.1|CO363124 RTK1_7_F09.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_7_F09_A029 5', mRNA sequence
Length = 760
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 512 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 453
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 452 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 393
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 392 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 333
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 332 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 273
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 272 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 213
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 212 atcttagtaccctgagtcc 194
Score = 79.8 bits (40), Expect = 2e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||||| ||||||||||||
Sbjct: 137 tcataccaatctttctttgagaaggggtctacagcctttttcttgcctcccttctttccc 78
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | |||||||| ||||| |||||
Sbjct: 77 ttggatatgcgtttgttcttcccgacggccat 46
>gb|CO366062.1|CO366062 RTK1_20_H12.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_20_H12_A029 5', mRNA sequence
Length = 700
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 424 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 365
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 364 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 305
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 304 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 245
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 244 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 185
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 184 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 125
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 124 atcttagtaccctgagtcc 106
Score = 46.1 bits (23), Expect = 0.003
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgcc 1042
||||||||||| ||||| ||||| ||||| || | ||||||||||||
Sbjct: 49 tcataccaatctttctttgagaaggggtctacagcctttttcttgcc 3
>gb|CX646886.1|CX646886 COLD1_12_D06.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_12_D06_A029 3', mRNA sequence
Length = 932
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Plus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 472 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 531
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 532 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 591
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 592 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 651
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 652 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 711
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 712 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 771
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 772 atcttagtaccctgagtcc 790
Score = 73.8 bits (37), Expect = 1e-011
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||||| ||||||||||||
Sbjct: 847 tcataccaatctttctttgagaaggggtctacagcctttttcttgcctcccttctttccc 906
Query: 1056 ttgga 1060
|||||
Sbjct: 907 ttgga 911
>gb|CX647525.1|CX647525 COLD1_17_H02.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_17_H02_A029 3', mRNA sequence
Length = 939
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Plus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 412 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 471
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 472 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 531
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 532 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 591
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 592 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 651
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 652 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 711
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 712 atcttagtaccctgagtcc 730
Score = 79.8 bits (40), Expect = 2e-013
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||||| ||||||||||||
Sbjct: 787 tcataccaatctttctttgagaaggggtctacagcctttttcttgcctcccttctttccc 846
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | |||||||| ||||| |||||
Sbjct: 847 ttggatatgcgtttgttcttcccgacggccat 878
>gb|CX652981.1|CX652981 COLD1_62_D12.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_62_D12_A029 5', mRNA sequence
Length = 876
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 499 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 440
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 439 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 380
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 379 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 320
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 319 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 260
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 259 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 200
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 199 atcttagtaccctgagtcc 181
Score = 79.8 bits (40), Expect = 2e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||||| ||||||||||||
Sbjct: 124 tcataccaatctttctttgagaaggggtctacagcctttttcttgcctcccttctttccc 65
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | |||||||| ||||| |||||
Sbjct: 64 ttggatatgcgtttgttcttcccgacggccat 33
>gb|CX716004.1|CX716004 RTPQ1_39_B07.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_39_B07_A032 5', mRNA sequence
Length = 617
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 452 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 393
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 392 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 333
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 332 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 273
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 272 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 213
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 212 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 153
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 152 atcttagtaccctgagtcc 134
Score = 73.8 bits (37), Expect = 1e-011
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||||| ||||||||||||
Sbjct: 77 tcataccaatctttctttgagaaggggtctacagcctttttcttgcctcccttctttccc 18
Query: 1056 ttgga 1060
|||||
Sbjct: 17 ttgga 13
>gb|DR019661.1|DR019661 STRS1_31_C04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_31_C04_A034 5', mRNA sequence
Length = 549
Score = 109 bits (55), Expect = 3e-022
Identities = 217/271 (80%)
Strand = Plus / Minus
Query: 669 atgcagaacaaacgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgatt 728
|||||||||| |||||| |||||| || |||||||| ||||| || || ||||| ||
Sbjct: 544 atgcagaacatacgcaaaccgtagttatctgttgtcttaacatccacgtgagcttcaatc 485
Query: 729 aatgtctgccacttcttcactagggatctcagtttatcagtggtaaaattcataccccaa 788
|| ||||||||||| || |||||||| || ||||||||||| |||| ||| |||||
Sbjct: 484 aaagtctgccacttgcggaccagggatctaagcttatcagtggtgaaatccattccccag 425
Query: 789 aagtttgtgagcacattcctgccctgcacatcttcagcacggagcctgattttcctgtaa 848
|| || ||||| |||||||| ||||| ||||| | ||||| ||| |||| || ||||||
Sbjct: 424 aaattagtgaggacattccttccctgaacatcctatgcacgaagcttgatctttctgtaa 365
Query: 849 gcttgatcctcgtcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcaga 908
|||||||| || || ||||||||||||||| |||||||||| || | ||||| ||
Sbjct: 364 gcttgatcttcatcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagc 305
Query: 909 ccctcagaagcaatcctggtaccctgtgtcc 939
|| ||||| |||||| | |||||||| ||||
Sbjct: 304 ccttcagatgcaatcttagtaccctgagtcc 274
Score = 103 bits (52), Expect = 2e-020
Identities = 82/92 (89%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||||||||| ||||| |||||||| | ||| |||||||| ||||||||||||
Sbjct: 217 tcataccaatccttctttgagaaggggtcgacagccttcttcttgcctcccttctttccc 158
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | ||||||||| |||||||||||
Sbjct: 157 ttggatatgcgcttgttcttcccgacagccat 126
>gb|DR048300.1|DR048300 RTBOR1_7_G08.g2_A029 Roots plus added boron Pinus taeda cDNA clone
RTBOR1_7_G08_A029 5', mRNA sequence
Length = 746
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 418 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 359
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 358 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 299
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 298 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 239
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 238 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 179
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 178 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 119
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 118 atcttagtaccctgagtcc 100
>gb|DR055615.1|DR055615 RTCA1_24_F12.g2_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_24_F12_A029 5', mRNA sequence
Length = 643
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 527 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 468
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 467 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 408
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 407 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 348
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 347 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 288
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 287 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 228
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 227 atcttagtaccctgagtcc 209
Score = 81.8 bits (41), Expect = 6e-014
Identities = 80/93 (86%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||||| ||||||||||||
Sbjct: 152 tcataccaatctttctttgagaaggggtctacagcctttttcttgcctcccttctttccc 93
Query: 1056 ttggagatcctcttgttctttccgacagccatg 1088
||||| || | |||||||| ||||| ||||||
Sbjct: 92 ttggatatgcgtttgttcttcccgacggccatg 60
>gb|DR060882.1|DR060882 RTNIT1_30_D04.g1_A029 Roots minus nitrogen Pinus taeda cDNA clone
RTNIT1_30_D04_A029 5', mRNA sequence
Length = 800
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 466 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 407
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 406 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 347
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 346 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 287
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 286 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 227
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 226 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 167
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 166 atcttagtaccctgagtcc 148
Score = 77.8 bits (39), Expect = 9e-013
Identities = 78/91 (85%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||||| ||||||||||||
Sbjct: 91 tcataccaatctttctttgagaatgggtctacagcctttttcttgcctcccttctttccc 32
Query: 1056 ttggagatcctcttgttctttccgacagcca 1086
||||| || | |||||||| ||||| ||||
Sbjct: 31 ttggatatgcgtttgttcttcccgacggcca 1
>gb|DR078062.1|DR078062 RTFEPL1_1_E06.g1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_1_E06_A029 5', mRNA sequence
Length = 754
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 514 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 455
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 454 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 395
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 394 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 335
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 334 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 275
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 274 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 215
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 214 atcttagtaccctgagtcc 196
Score = 79.8 bits (40), Expect = 2e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||||| ||||||||||||
Sbjct: 139 tcataccaatctttctttgagaaggggtctacagcctttttcttgcctcccttctttccc 80
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | |||||||| ||||| |||||
Sbjct: 79 ttggatatgcgtttgttcttcccgacggccat 48
>gb|DR080221.1|DR080221 RTFEPL1_21_E08.b1_A029 Roots plus added iron Pinus taeda cDNA clone
RTFEPL1_21_E08_A029 3', mRNA sequence
Length = 708
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Plus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 181 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 240
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 241 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 300
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 301 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 360
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 361 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 420
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 421 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 480
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 481 atcttagtaccctgagtcc 499
Score = 79.8 bits (40), Expect = 2e-013
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||||| ||||||||||||
Sbjct: 556 tcataccaatctttctttgagaaggggtctacagcctttttcttgcctcccttctttccc 615
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | |||||||| ||||| |||||
Sbjct: 616 ttggatatgcgtttgttcttcccgacggccat 647
>gb|DR088815.1|DR088815 RTAL1_4_F02.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_4_F02_A029 5', mRNA sequence
Length = 693
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 465 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 406
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 405 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 346
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 345 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 286
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 285 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 226
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 225 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 166
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 165 atcttagtaccctgagtcc 147
Score = 75.8 bits (38), Expect = 4e-012
Identities = 74/86 (86%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||||| ||||||||||||
Sbjct: 90 tcataccaatctttctttgagaaggggtctacagcctttttcttgcctcccttctttccc 31
Query: 1056 ttggagatcctcttgttctttccgac 1081
||||| || | |||||||| |||||
Sbjct: 30 ttggatatgcgtttgttcttcccgac 5
>gb|DR090386.1|DR090386 RTAL1_14_E07.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_14_E07_A029 5', mRNA sequence
Length = 694
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 519 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 460
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 459 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 400
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 399 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 340
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 339 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 280
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 279 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 220
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 219 atcttagtaccctgagtcc 201
Score = 79.8 bits (40), Expect = 2e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||||| ||||||||||||
Sbjct: 144 tcataccaatctttctttgagaaggggtctacagcctttttcttgcctcccttctttccc 85
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | |||||||| ||||| |||||
Sbjct: 84 ttggatatgcgtttgttcttcccgacggccat 53
>gb|DR117351.1|DR117351 RTMG1_6_A07.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_6_A07_A029 5', mRNA sequence
Length = 871
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 502 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 443
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 442 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 383
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 382 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 323
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 322 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 263
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 262 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 203
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 202 atcttagtaccctgagtcc 184
Score = 79.8 bits (40), Expect = 2e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||||| ||||||||||||
Sbjct: 127 tcataccaatctttctttgagaaggggtctacagcctttttcttgcctcccttctttccc 68
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | |||||||| ||||| |||||
Sbjct: 67 ttggatatgcgtttgttcttcccgacggccat 36
>gb|DR165494.1|DR165494 RTPHOS1_5_A07.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_5_A07_A029 5', mRNA sequence
Length = 913
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 523 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 464
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 463 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 404
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 403 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 344
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 343 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 284
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 283 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 224
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 223 atcttagtaccctgagtcc 205
Score = 79.8 bits (40), Expect = 2e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||||| ||||||||||||
Sbjct: 148 tcataccaatctttctttgagaaggggtctacagcctttttcttgcctcccttctttccc 89
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | |||||||| ||||| |||||
Sbjct: 88 ttggatatgcgtttgttcttcccgacggccat 57
>gb|DR166061.1|DR166061 RTPHOS1_9_C12.b2_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_9_C12_A029 3', mRNA sequence
Length = 670
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Plus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 143 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 202
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 203 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 262
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 263 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 322
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 323 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 382
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 383 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 442
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 443 atcttagtaccctgagtcc 461
Score = 67.9 bits (34), Expect = 9e-010
Identities = 59/66 (89%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtc-tttttcttgccacccttctttcc 1054
||||||||||| ||||| ||||| ||||| || ||| ||||||||||| |||||||||||
Sbjct: 518 tcataccaatctttctttgagaaggggtctacagtcctttttcttgcctcccttctttcc 577
Query: 1055 cttgga 1060
||||||
Sbjct: 578 cttgga 583
>gb|DR166370.1|DR166370 RTPHOS1_11_B03.g2_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_11_B03_A029 5', mRNA sequence
Length = 691
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 515 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 456
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 455 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 396
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 395 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 336
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 335 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 276
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 275 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 216
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 215 atcttagtaccctgagtcc 197
Score = 79.8 bits (40), Expect = 2e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||||| ||||||||||||
Sbjct: 140 tcataccaatctttctttgagaaggggtctacagcctttttcttgcctcccttctttccc 81
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | |||||||| ||||| |||||
Sbjct: 80 ttggatatgcgtttgttcttcccgacggccat 49
>gb|DR168745.1|DR168745 RTPHOS1_27_C04.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_27_C04_A029 5', mRNA sequence
Length = 593
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 467 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 408
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 407 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 348
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 347 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 288
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 287 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 228
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 227 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 168
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 167 atcttagtaccctgagtcc 149
Score = 79.8 bits (40), Expect = 2e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||||| ||||||||||||
Sbjct: 92 tcataccaatctttctttgagaaggggtctacagcctttttcttgcctcccttctttccc 33
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | |||||||| ||||| |||||
Sbjct: 32 ttggatatgcgtttgttcttcccgacggccat 1
>gb|DR169077.1|DR169077 RTPHOS1_29_G12.g1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_29_G12_A029 5', mRNA sequence
Length = 682
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 514 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 455
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 454 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 395
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 394 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 335
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 334 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 275
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 274 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 215
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 214 atcttagtaccctgagtcc 196
Score = 79.8 bits (40), Expect = 2e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||||| ||||||||||||
Sbjct: 139 tcataccaatctttctttgagaaggggtctacagcctttttcttgcctcccttctttccc 80
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | |||||||| ||||| |||||
Sbjct: 79 ttggatatgcgtttgttcttcccgacggccat 48
>gb|DR182083.1|DR182083 RTMNUT1_42_F12.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_42_F12_A029 5', mRNA sequence
Length = 762
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 496 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 437
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 436 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 377
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 376 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 317
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 316 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 257
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 256 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 197
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 196 atcttagtaccctgagtcc 178
Score = 79.8 bits (40), Expect = 2e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||||| ||||||||||||
Sbjct: 121 tcataccaatctttctttgagaaggggtctacagcctttttcttgcctcccttctttccc 62
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | |||||||| ||||| |||||
Sbjct: 61 ttggatatgcgtttgttcttcccgacggccat 30
>gb|DR385739.1|DR385739 RTHG1_10_C02.g1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_10_C02_A029 5', mRNA sequence
Length = 842
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 510 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 451
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 450 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 391
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 390 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 331
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 330 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 271
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 270 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 211
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 210 atcttagtaccctgagtcc 192
Score = 79.8 bits (40), Expect = 2e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||||| ||||||||||||
Sbjct: 135 tcataccaatctttctttgagaaggggtctacagcctttttcttgcctcccttctttccc 76
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | |||||||| ||||| |||||
Sbjct: 75 ttggatatgcgtttgttcttcccgacggccat 44
>gb|DR745312.1|DR745312 RTCU1_28_B03.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_28_B03_A029 5', mRNA sequence
Length = 619
Score = 109 bits (55), Expect = 3e-022
Identities = 253/319 (79%)
Strand = Plus / Minus
Query: 621 gcatagcaggttctcttgacctggtttgggcgcctcttggtgaagccgatgcagaacaaa 680
|||||||| |||| |||||| || || || | |||||| ||||| || |||||||||| |
Sbjct: 515 gcatagcatgttcgcttgacttgattgggcctcctctttgtgaatccaatgcagaacata 456
Query: 681 cgcaacatgtagttgtcggttgtcttgacatcaacatgggcttcgattaatgtctgccac 740
||||| ||||| || |||||||| ||||| || || ||||| || || |||||||||
Sbjct: 455 cgcaaaccatagttatctgttgtcttaacatccacgtgagcttcaatcaaagtctgccac 396
Query: 741 ttcttcactagggatctcagtttatcagtggtaaaattcataccccaaaagtttgtgagc 800
|| || | |||||| || ||||||||||| |||| ||| ||||| ||||| |||||
Sbjct: 395 ttacggaccaaggatctaagcttatcagtggtgaaatccattccccagaagttagtgagg 336
Query: 801 acattcctgccctgcacatcttcagcacggagcctgattttcctgtaagcttgatcctcg 860
|||||||| || || ||||| || ||||| ||| |||| || |||||||| ||||| ||
Sbjct: 335 acattccttccttgaacatcctctgcacgaagcttgatctttctgtaagcctgatcttca 276
Query: 861 tcgccctgaagatcagctaggcaaacctcaaagactctgtgcttcagaccctcagaagca 920
|| ||||||||||||||| |||||||||| || | ||||| || || ||||| |||
Sbjct: 275 tcattctgaagatcagctagtgaaacctcaaacacacgatgcttaagcccttcagatgca 216
Query: 921 atcctggtaccctgtgtcc 939
||| | |||||||| ||||
Sbjct: 215 atcttagtaccctgagtcc 197
Score = 79.8 bits (40), Expect = 2e-013
Identities = 79/92 (85%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||| ||||| ||||| ||||| || | |||||||||||| ||||||||||||
Sbjct: 140 tcataccaatctttctttgagaaggggtctacagcctttttcttgcctcccttctttccc 81
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | |||||||| ||||| |||||
Sbjct: 80 ttggatatgcgtttgttcttcccgacggccat 49
>gb|AW043049.1|AW043049 ST28F06 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST28F06, mRNA sequence
Length = 601
Score = 105 bits (53), Expect = 4e-021
Identities = 227/285 (79%)
Strand = Plus / Minus
Query: 655 tcttggtgaagccgatgcagaacaaacgcaacatgtagttgtcggttgtcttgacatcaa 714
|||| ||||| || |||||||||| |||||| ||||| || |||||||| ||||| |
Sbjct: 512 tctttgtgaatccaatgcagaacatacgcaaaccatagttatctgttgtcttaacatcca 453
Query: 715 catgggcttcgattaatgtctgccacttcttcactagggatctcagtttatcagtggtaa 774
| || ||||| || || ||||||||||| || ||||| || || ||||||||||| |
Sbjct: 452 cgtgagcttcaatcaaagtctgccacttgcggaccagggacctaagcttatcagtggtga 393
Query: 775 aattcataccccaaaagtttgtgagcacattcctgccctgcacatcttcagcacggagcc 834
||| ||| ||||| || || ||||| |||||||| ||||| ||||| || ||||| |||
Sbjct: 392 aatccattccccagaaattagtgaggacattccttccctgaacatcctctgcacgaagct 333
Query: 835 tgattttcctgtaagcttgatcctcgtcgccctgaagatcagctaggcaaacctcaaaga 894
|||| || |||||||||||||| || || ||||||||||||||| |||||||||| |
Sbjct: 332 tgatctttctgtaagcttgatcttcatcattctgaagatcagctagtgaaacctcaaaca 273
Query: 895 ctctgtgcttcagaccctcagaagcaatcctggtaccctgtgtcc 939
| | ||||| || || ||||| |||||| | |||||||| ||||
Sbjct: 272 cacgatgcttaagtccttcagatgcaatcttagtaccctgagtcc 228
Score = 95.6 bits (48), Expect = 4e-018
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||||||||| ||||| |||||||| | ||| |||||||| ||||||||||||
Sbjct: 171 tcataccaatccttctttgagaaggggtcgacagccttcttcttgcctcccttctttccc 112
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | |||| |||| |||||||||||
Sbjct: 111 ttggatatgcgcttgctcttcccgacagccat 80
>gb|AW043210.1|AW043210 ST30F04 Pine TriplEx shoot tip library Pinus taeda cDNA clone
ST30F04, mRNA sequence
Length = 584
Score = 105 bits (53), Expect = 4e-021
Identities = 228/285 (80%), Gaps = 1/285 (0%)
Strand = Plus / Minus
Query: 655 tcttggtgaagccgatgcagaacaaacgcaacatgtagttgtcggttgtcttgacatcaa 714
|||| ||||| || |||||||||| ||||||| ||||| || |||||||| ||||| |
Sbjct: 513 tctttgtgaatccaatgcagaacatacgcaacccatagttatctgttgtcttaacatcca 454
Query: 715 catgggcttcgattaatgtctgccacttcttcactagggatctcagtttatcagtggtaa 774
| || ||||| || || ||||||||||| || ||| |||| || ||||||||||| |
Sbjct: 453 cgtgagcttcaatcaaagtctgccacttgcggaccagg-atctaagcttatcagtggtga 395
Query: 775 aattcataccccaaaagtttgtgagcacattcctgccctgcacatcttcagcacggagcc 834
||| ||| ||||| || || ||||| |||||||| ||||| ||||| || ||||| |||
Sbjct: 394 aatccattccccagaaattagtgaggacattccttccctgaacatcctctgcacgaagct 335
Query: 835 tgattttcctgtaagcttgatcctcgtcgccctgaagatcagctaggcaaacctcaaaga 894
|||| || |||||||||||||| || || ||||||||||||||| |||||||||| |
Sbjct: 334 tgatctttctgtaagcttgatcttcatcattctgaagatcagctagtgaaacctcaaaca 275
Query: 895 ctctgtgcttcagaccctcagaagcaatcctggtaccctgtgtcc 939
| | ||||| || || ||||| |||||| | |||||||| ||||
Sbjct: 274 cacgatgcttaagtccttcagatgcaatcttagtaccctgagtcc 230
Score = 95.6 bits (48), Expect = 4e-018
Identities = 81/92 (88%)
Strand = Plus / Minus
Query: 996 tcataccaatccttcttagagaaagggtcgacggtctttttcttgccacccttctttccc 1055
||||||||||||||||| ||||| |||||||| | | | |||||||| ||||||||||||
Sbjct: 173 tcataccaatccttctttgagaaggggtcgacagccctcttcttgcctcccttctttccc 114
Query: 1056 ttggagatcctcttgttctttccgacagccat 1087
||||| || | ||||||||| |||||||||||
Sbjct: 113 ttggatatgcgcttgttcttcccgacagccat 82
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 128,070
Number of Sequences: 355925
Number of extensions: 128070
Number of successful extensions: 34199
Number of sequences better than 0.5: 102
Number of HSP's better than 0.5 without gapping: 92
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 33834
Number of HSP's gapped (non-prelim): 302
length of query: 1197
length of database: 217,277,237
effective HSP length: 19
effective length of query: 1178
effective length of database: 210,514,662
effective search space: 247986271836
effective search space used: 247986271836
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)