BLASTN 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QCN28g01.yg.2.1
         (513 letters)

Database: Oryza_nucl_with_EST.fasta 
           438,736 sequences; 2,800,419,916 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AY324384.1|  Oryza sativa (japonica cultivar-group) callo...   373   e-101
ref|XM_468556.1|  Oryza sativa (japonica cultivar-group),  mRNA   373   e-101
gb|CB675632.1|CB675632  OSJNEe11H21.r OSJNEe Oryza sativa (j...   347   4e-093
gb|CB639228.1|CB639228  OSJNEa08N01.f OSJNEa Oryza sativa (j...   242   2e-061
dbj|AP004082.3|  Oryza sativa (japonica cultivar-group) geno...   157   7e-036
dbj|AP005290.2|  Oryza sativa (japonica cultivar-group) geno...   157   7e-036
gb|AACV01005686.1|  Oryza sativa (japonica cultivar-group) c...   157   7e-036
ref|NT_107182.1|  Oryza sativa (japonica cultivar-group)          157   7e-036
gb|CH401170.1|  Oryza sativa (japonica cultivar-group) chrom...   157   7e-036
gb|CM000139.1|  Oryza sativa (japonica cultivar-group) chrom...   157   7e-036
dbj|AP008208.1|  Oryza sativa (japonica cultivar-group) geno...   157   7e-036
ref|NT_107235.1|  Oryza sativa (japonica cultivar-group)          133   1e-028
dbj|AP004685.3|  Oryza sativa (japonica cultivar-group) geno...   133   1e-028
dbj|AP005750.3|  Oryza sativa (japonica cultivar-group) geno...   133   1e-028
gb|AACV01014976.1|  Oryza sativa (japonica cultivar-group) c...   133   1e-028
gb|CH401216.1|  Oryza sativa (japonica cultivar-group) chrom...   133   1e-028
gb|CM000143.1|  Oryza sativa (japonica cultivar-group) chrom...   133   1e-028
dbj|AP008212.1|  Oryza sativa (japonica cultivar-group) geno...   133   1e-028
gb|AZ126558.1|AZ126558  OSJNBb0078B11r CUGI Rice BAC Library...    72   3e-010
dbj|AG210767.1|  Oryza sativa (japonica cultivar-group) DNA,...    50   0.001
dbj|AG023962.1|  Oryza sativa (japonica cultivar-group) DNA,...    50   0.001
gb|AC104427.2|  Oryza sativa (japonica cultivar-group) chrom...    50   0.001
gb|AC144426.1|  Oryza sativa (japonica cultivar-group) chrom...    50   0.001
gb|AACV01005795.1|  Oryza sativa (japonica cultivar-group) c...    50   0.001
ref|NM_187591.1|  Oryza sativa (japonica cultivar-group),  p...    50   0.001
ref|NT_107183.1|  Oryza sativa (japonica cultivar-group)           50   0.001
gb|CH401173.1|  Oryza sativa (japonica cultivar-group) chrom...    50   0.001
gb|CM000140.1|  Oryza sativa (japonica cultivar-group) chrom...    50   0.001
dbj|AP008209.1|  Oryza sativa (japonica cultivar-group) geno...    50   0.001
gb|DP000009.1|  Oryza sativa (japonica cultivar-group) chrom...    50   0.001
ref|NM_193204.1|  Oryza sativa (japonica cultivar-group),  p...    46   0.018
gb|CF328591.1|CF328591  NACL--03-J03.b1 Rice callus plasmid ...    44   0.073
gb|CF329508.1|CF329508  NACL--04-N18.b1 Rice callus plasmid ...    44   0.073
dbj|AK064082.1|  Oryza sativa (japonica cultivar-group) cDNA...    44   0.073
dbj|AK101426.1|  Oryza sativa (japonica cultivar-group) cDNA...    44   0.073
gb|AACV01002509.1|  Oryza sativa (japonica cultivar-group) c...    44   0.073
dbj|AP003221.2|  Oryza sativa (japonica cultivar-group) geno...    44   0.073
dbj|AP003293.5|  Oryza sativa (japonica cultivar-group) geno...    44   0.073
dbj|BA000010.8|  Oryza sativa (japonica cultivar-group) geno...    44   0.073
ref|NM_190932.1|  Oryza sativa (japonica cultivar-group),  p...    44   0.073
ref|NT_079927.2|  Oryza sativa (japonica cultivar-group)           44   0.073
gb|CH401168.1|  Oryza sativa (japonica cultivar-group) chrom...    44   0.073
gb|CM000138.1|  Oryza sativa (japonica cultivar-group) chrom...    44   0.073
dbj|AP008207.1|  Oryza sativa (japonica cultivar-group) geno...    44   0.073
gb|AQ574894.1|AQ574894  nbxb0086E18f CUGI Rice BAC Library O...    42   0.29 
gb|AACV01001409.1|  Oryza sativa (japonica cultivar-group) c...    42   0.29 
ref|NT_079926.2|  Oryza sativa (japonica cultivar-group)           42   0.29 
dbj|AP003447.2|  Oryza sativa (japonica cultivar-group) geno...    42   0.29 
gb|CH401166.1|  Oryza sativa (japonica cultivar-group) chrom...    42   0.29 
>gb|AY324384.1| Oryza sativa (japonica cultivar-group) callose synthase-like
           protein mRNA, partial cds
          Length = 2727

 Score =  373 bits (188), Expect = e-101
 Identities = 335/384 (87%)
 Strand = Plus / Minus

                                                                       
Query: 100 gtacatcatccctcttacagttcttgtcaaagtttgtccccggtatgatgcccaaaggcg 159
           ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||
Sbjct: 405 gtacatcatccctctgacagttctcgtcaaagtttggcccctgtatgatgcccaaaggcg 346

                                                                       
Query: 160 aagctgctcttcagaatgctcagtctcgtggagttgatcttcactctcacaatgcaccct 219
           |||||  |||||  | ||||| |||||  ||||||  |||||| | |  |||| ||||||
Sbjct: 345 aagctcatcttccaactgctctgtctcacggagttcctcttcagtattgcaatccaccct 286

                                                                       
Query: 220 ttcaagaaaatttttccattcatctgggtagattttttgcaaataaaaaaggatggaaac 279
           || ||| |||| ||||||||||||||| |||||||||||||| |||||||| || |||||
Sbjct: 285 ttgaaggaaatgtttccattcatctggatagattttttgcaagtaaaaaagaatagaaac 226

                                                                       
Query: 280 tccgtcctcattctgttctgctagtgcttgtgaagagaaaagaacatcttctttataata 339
            || || |||||||| ||| ||| |||||| ||||||||||| ||||||||||| || ||
Sbjct: 225 cccatcttcattctggtcttctaatgcttgggaagagaaaaggacatcttctttgtagta 166

                                                                       
Query: 340 aggagtcaagacagagaagggcaacatttgccgcacttttggagcatctggcatcgacat 399
           ||||||||||||||||||||||||||| ||||| ||||||||||||  ||||||   |||
Sbjct: 165 aggagtcaagacagagaagggcaacatgtgccggacttttggagcacttggcatgtccat 106

                                                                       
Query: 400 aaaaagagaattagcaaagaaagatatcctccttctagcatccaggtttgtagggacatc 459
            |||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||
Sbjct: 105 gaaaagagaattagcaaagaatgatatccgccttctagcatccaggtttgtaggaacatc 46

                                   
Query: 460 catagccgattccttcaccgtgag 483
           |||||| ||||||||||| |||||
Sbjct: 45  catagcagattccttcactgtgag 22
>ref|XM_468556.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 5910

 Score =  373 bits (188), Expect = e-101
 Identities = 335/384 (87%)
 Strand = Plus / Minus

                                                                        
Query: 100  gtacatcatccctcttacagttcttgtcaaagtttgtccccggtatgatgcccaaaggcg 159
            ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||
Sbjct: 3588 gtacatcatccctctgacagttctcgtcaaagtttggcccctgtatgatgcccaaaggcg 3529

                                                                        
Query: 160  aagctgctcttcagaatgctcagtctcgtggagttgatcttcactctcacaatgcaccct 219
            |||||  |||||  | ||||| |||||  ||||||  |||||| | |  |||| ||||||
Sbjct: 3528 aagctcatcttccaactgctctgtctcacggagttcctcttcagtattgcaatccaccct 3469

                                                                        
Query: 220  ttcaagaaaatttttccattcatctgggtagattttttgcaaataaaaaaggatggaaac 279
            || ||| |||| ||||||||||||||| |||||||||||||| |||||||| || |||||
Sbjct: 3468 ttgaaggaaatgtttccattcatctggatagattttttgcaagtaaaaaagaatagaaac 3409

                                                                        
Query: 280  tccgtcctcattctgttctgctagtgcttgtgaagagaaaagaacatcttctttataata 339
             || || |||||||| ||| ||| |||||| ||||||||||| ||||||||||| || ||
Sbjct: 3408 cccatcttcattctggtcttctaatgcttgggaagagaaaaggacatcttctttgtagta 3349

                                                                        
Query: 340  aggagtcaagacagagaagggcaacatttgccgcacttttggagcatctggcatcgacat 399
            ||||||||||||||||||||||||||| ||||| ||||||||||||  ||||||   |||
Sbjct: 3348 aggagtcaagacagagaagggcaacatgtgccggacttttggagcacttggcatgtccat 3289

                                                                        
Query: 400  aaaaagagaattagcaaagaaagatatcctccttctagcatccaggtttgtagggacatc 459
             |||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||
Sbjct: 3288 gaaaagagaattagcaaagaatgatatccgccttctagcatccaggtttgtaggaacatc 3229

                                    
Query: 460  catagccgattccttcaccgtgag 483
            |||||| ||||||||||| |||||
Sbjct: 3228 catagcagattccttcactgtgag 3205
>gb|CB675632.1|CB675632 OSJNEe11H21.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
           clone OSJNEe11H21 3', mRNA sequence
          Length = 914

 Score =  347 bits (175), Expect = 4e-093
 Identities = 319/367 (86%)
 Strand = Plus / Plus

                                                                       
Query: 117 cagttcttgtcaaagtttgtccccggtatgatgcccaaaggcgaagctgctcttcagaat 176
           ||||||| ||||||||||| |||| |||||||||||||||||||||||  |||||  | |
Sbjct: 522 cagttctcgtcaaagtttggcccctgtatgatgcccaaaggcgaagctcatcttccaact 581

                                                                       
Query: 177 gctcagtctcgtggagttgatcttcactctcacaatgcaccctttcaagaaaatttttcc 236
           |||| |||||  ||||||  |||||| | |  |||| |||||||| ||| |||| |||||
Sbjct: 582 gctctgtctcacggagttcctcttcagtattgcaatccaccctttgaaggaaatgtttcc 641

                                                                       
Query: 237 attcatctgggtagattttttgcaaataaaaaaggatggaaactccgtcctcattctgtt 296
           |||||||||| |||||||||||||| |||||||| || ||||| || || |||||||| |
Sbjct: 642 attcatctggatagattttttgcaagtaaaaaagaatagaaaccccatcttcattctggt 701

                                                                       
Query: 297 ctgctagtgcttgtgaagagaaaagaacatcttctttataataaggagtcaagacagaga 356
           || ||| |||||| ||||||||||| ||||||||||| || |||||||||||||||||||
Sbjct: 702 cttctaatgcttgggaagagaaaaggacatcttctttgtagtaaggagtcaagacagaga 761

                                                                       
Query: 357 agggcaacatttgccgcacttttggagcatctggcatcgacataaaaagagaattagcaa 416
           |||||||||| ||||| ||||||||||||  ||||||   ||| ||||||||||||||||
Sbjct: 762 agggcaacatgtgccggacttttggagcacttggcatgtccatgaaaagagaattagcaa 821

                                                                       
Query: 417 agaaagatatcctccttctagcatccaggtttgtagggacatccatagccgattccttca 476
           |||| ||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 822 agaatgatatccgccttctagcatccaggtttgtaggaacatccatagcagattccttca 881

                  
Query: 477 ccgtgag 483
           | |||||
Sbjct: 882 ctgtgag 888
>gb|CB639228.1|CB639228 OSJNEa08N01.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
           clone OSJNEa08N01 5', mRNA sequence
          Length = 603

 Score =  242 bits (122), Expect = 2e-061
 Identities = 233/270 (86%)
 Strand = Plus / Minus

                                                                       
Query: 214 caccctttcaagaaaatttttccattcatctgggtagattttttgcaaataaaaaaggat 273
           |||||| ||||| |||||||||||||||||||||||||||||||| || || ||||| ||
Sbjct: 429 caccctatcaaggaaatttttccattcatctgggtagattttttgtaagtagaaaagtat 370

                                                                       
Query: 274 ggaaactccgtcctcattctgttctgctagtgcttgtgaagagaaaagaacatcttcttt 333
           |||||| || ||||||||  | ||| | ||    || || ||||||||||||||||| ||
Sbjct: 369 ggaaaccccatcctcatttggctcttccagattatgagaggagaaaagaacatcttcctt 310

                                                                       
Query: 334 ataataaggagtcaagacagagaagggcaacatttgccgcacttttggagcatctggcat 393
            |||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||
Sbjct: 309 gtaataaggagtcaagacagagaagggcaacatatgccgcacttttggagcattaggcat 250

                                                                       
Query: 394 cgacataaaaagagaattagcaaagaaagatatcctccttctagcatccaggtttgtagg 453
           |  ||||||||||||||| |||||||| |||||||  || |||||||| ||||| |||||
Sbjct: 249 ctccataaaaagagaatttgcaaagaacgatatccgtctcctagcatcaaggttcgtagg 190

                                         
Query: 454 gacatccatagccgattccttcaccgtgag 483
           |||||||||||| || || ||||| |||||
Sbjct: 189 gacatccatagcagactctttcacagtgag 160

 Score = 87.7 bits (44), Expect = 5e-015
 Identities = 65/72 (90%)
 Strand = Plus / Minus

                                                                       
Query: 100 gtacatcatccctcttacagttcttgtcaaagtttgtccccggtatgatgcccaaaggcg 159
           ||||||||| ||||| |||||||||||||| || |||||||  |||||||||||||||||
Sbjct: 543 gtacatcattcctctcacagttcttgtcaatgtctgtcccctatatgatgcccaaaggcg 484

                       
Query: 160 aagctgctcttc 171
           ||||| ||||||
Sbjct: 483 aagctcctcttc 472
>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1149_C12
          Length = 120743

 Score =  157 bits (79), Expect = 7e-036
 Identities = 118/131 (90%)
 Strand = Plus / Minus

                                                                         
Query: 353   gagaagggcaacatttgccgcacttttggagcatctggcatcgacataaaaagagaatta 412
             |||||||||||||| ||||| ||||||||||||  ||||||   ||| ||||||||||||
Sbjct: 87708 gagaagggcaacatgtgccggacttttggagcacttggcatgtccatgaaaagagaatta 87649

                                                                         
Query: 413   gcaaagaaagatatcctccttctagcatccaggtttgtagggacatccatagccgattcc 472
             |||||||| ||||||| |||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 87648 gcaaagaatgatatccgccttctagcatccaggtttgtaggaacatccatagcagattcc 87589

                        
Query: 473   ttcaccgtgag 483
             ||||| |||||
Sbjct: 87588 ttcactgtgag 87578

 Score =  107 bits (54), Expect = 6e-021
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                         
Query: 243   ctgggtagattttttgcaaataaaaaaggatggaaactccgtcctcattctgttctgcta 302
             |||| |||||||||||||| |||||||| || ||||| || || |||||||| ||| |||
Sbjct: 88376 ctggatagattttttgcaagtaaaaaagaatagaaaccccatcttcattctggtcttcta 88317

                                                               
Query: 303   gtgcttgtgaagagaaaagaacatcttctttataataaggagtcaagaca 352
              |||||| ||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 88316 atgcttgggaagagaaaaggacatcttctttgtagtaaggagtcaagaca 88267

 Score = 87.7 bits (44), Expect = 5e-015
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                         
Query: 117   cagttcttgtcaaagtttgtccccggtatgatgcccaaaggcgaagctgctcttcagaat 176
             ||||||| ||||||||||| |||| |||||||||||||||||||||||  |||||  | |
Sbjct: 88604 cagttctcgtcaaagtttggcccctgtatgatgcccaaaggcgaagctcatcttccaact 88545

                                                                         
Query: 177   gctcagtctcgtggagttgatcttcactctcacaatgcaccctttcaagaaaatttttcc 236
             |||| |||||  ||||||  |||||| | |  |||| |||||||| ||| |||| |||||
Sbjct: 88544 gctctgtctcacggagttcctcttcagtattgcaatccaccctttgaaggaaatgtttcc 88485

                     
Query: 237   attcatct 244
             ||||||||
Sbjct: 88484 attcatct 88477
>dbj|AP005290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1282_E10
          Length = 107284

 Score =  157 bits (79), Expect = 7e-036
 Identities = 118/131 (90%)
 Strand = Plus / Minus

                                                                        
Query: 353  gagaagggcaacatttgccgcacttttggagcatctggcatcgacataaaaagagaatta 412
            |||||||||||||| ||||| ||||||||||||  ||||||   ||| ||||||||||||
Sbjct: 7539 gagaagggcaacatgtgccggacttttggagcacttggcatgtccatgaaaagagaatta 7480

                                                                        
Query: 413  gcaaagaaagatatcctccttctagcatccaggtttgtagggacatccatagccgattcc 472
            |||||||| ||||||| |||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 7479 gcaaagaatgatatccgccttctagcatccaggtttgtaggaacatccatagcagattcc 7420

                       
Query: 473  ttcaccgtgag 483
            ||||| |||||
Sbjct: 7419 ttcactgtgag 7409

 Score =  107 bits (54), Expect = 6e-021
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                        
Query: 243  ctgggtagattttttgcaaataaaaaaggatggaaactccgtcctcattctgttctgcta 302
            |||| |||||||||||||| |||||||| || ||||| || || |||||||| ||| |||
Sbjct: 8207 ctggatagattttttgcaagtaaaaaagaatagaaaccccatcttcattctggtcttcta 8148

                                                              
Query: 303  gtgcttgtgaagagaaaagaacatcttctttataataaggagtcaagaca 352
             |||||| ||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 8147 atgcttgggaagagaaaaggacatcttctttgtagtaaggagtcaagaca 8098

 Score = 87.7 bits (44), Expect = 5e-015
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 117  cagttcttgtcaaagtttgtccccggtatgatgcccaaaggcgaagctgctcttcagaat 176
            ||||||| ||||||||||| |||| |||||||||||||||||||||||  |||||  | |
Sbjct: 8435 cagttctcgtcaaagtttggcccctgtatgatgcccaaaggcgaagctcatcttccaact 8376

                                                                        
Query: 177  gctcagtctcgtggagttgatcttcactctcacaatgcaccctttcaagaaaatttttcc 236
            |||| |||||  ||||||  |||||| | |  |||| |||||||| ||| |||| |||||
Sbjct: 8375 gctctgtctcacggagttcctcttcagtattgcaatccaccctttgaaggaaatgtttcc 8316

                    
Query: 237  attcatct 244
            ||||||||
Sbjct: 8315 attcatct 8308
>gb|AACV01005686.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005686, whole
            genome shotgun sequence
          Length = 38041

 Score =  157 bits (79), Expect = 7e-036
 Identities = 118/131 (90%)
 Strand = Plus / Minus

                                                                        
Query: 353  gagaagggcaacatttgccgcacttttggagcatctggcatcgacataaaaagagaatta 412
            |||||||||||||| ||||| ||||||||||||  ||||||   ||| ||||||||||||
Sbjct: 2063 gagaagggcaacatgtgccggacttttggagcacttggcatgtccatgaaaagagaatta 2004

                                                                        
Query: 413  gcaaagaaagatatcctccttctagcatccaggtttgtagggacatccatagccgattcc 472
            |||||||| ||||||| |||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 2003 gcaaagaatgatatccgccttctagcatccaggtttgtaggaacatccatagcagattcc 1944

                       
Query: 473  ttcaccgtgag 483
            ||||| |||||
Sbjct: 1943 ttcactgtgag 1933

 Score =  107 bits (54), Expect = 6e-021
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                        
Query: 243  ctgggtagattttttgcaaataaaaaaggatggaaactccgtcctcattctgttctgcta 302
            |||| |||||||||||||| |||||||| || ||||| || || |||||||| ||| |||
Sbjct: 2731 ctggatagattttttgcaagtaaaaaagaatagaaaccccatcttcattctggtcttcta 2672

                                                              
Query: 303  gtgcttgtgaagagaaaagaacatcttctttataataaggagtcaagaca 352
             |||||| ||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 2671 atgcttgggaagagaaaaggacatcttctttgtagtaaggagtcaagaca 2622

 Score = 87.7 bits (44), Expect = 5e-015
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 117  cagttcttgtcaaagtttgtccccggtatgatgcccaaaggcgaagctgctcttcagaat 176
            ||||||| ||||||||||| |||| |||||||||||||||||||||||  |||||  | |
Sbjct: 2959 cagttctcgtcaaagtttggcccctgtatgatgcccaaaggcgaagctcatcttccaact 2900

                                                                        
Query: 177  gctcagtctcgtggagttgatcttcactctcacaatgcaccctttcaagaaaatttttcc 236
            |||| |||||  ||||||  |||||| | |  |||| |||||||| ||| |||| |||||
Sbjct: 2899 gctctgtctcacggagttcctcttcagtattgcaatccaccctttgaaggaaatgtttcc 2840

                    
Query: 237  attcatct 244
            ||||||||
Sbjct: 2839 attcatct 2832
>ref|NT_107182.1| Oryza sativa (japonica cultivar-group)
          Length = 1785023

 Score =  157 bits (79), Expect = 7e-036
 Identities = 118/131 (90%)
 Strand = Plus / Minus

                                                                           
Query: 353     gagaagggcaacatttgccgcacttttggagcatctggcatcgacataaaaagagaatta 412
               |||||||||||||| ||||| ||||||||||||  ||||||   ||| ||||||||||||
Sbjct: 1652266 gagaagggcaacatgtgccggacttttggagcacttggcatgtccatgaaaagagaatta 1652207

                                                                           
Query: 413     gcaaagaaagatatcctccttctagcatccaggtttgtagggacatccatagccgattcc 472
               |||||||| ||||||| |||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 1652206 gcaaagaatgatatccgccttctagcatccaggtttgtaggaacatccatagcagattcc 1652147

                          
Query: 473     ttcaccgtgag 483
               ||||| |||||
Sbjct: 1652146 ttcactgtgag 1652136

 Score =  107 bits (54), Expect = 6e-021
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                           
Query: 243     ctgggtagattttttgcaaataaaaaaggatggaaactccgtcctcattctgttctgcta 302
               |||| |||||||||||||| |||||||| || ||||| || || |||||||| ||| |||
Sbjct: 1652934 ctggatagattttttgcaagtaaaaaagaatagaaaccccatcttcattctggtcttcta 1652875

                                                                 
Query: 303     gtgcttgtgaagagaaaagaacatcttctttataataaggagtcaagaca 352
                |||||| ||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 1652874 atgcttgggaagagaaaaggacatcttctttgtagtaaggagtcaagaca 1652825

 Score = 87.7 bits (44), Expect = 5e-015
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                           
Query: 117     cagttcttgtcaaagtttgtccccggtatgatgcccaaaggcgaagctgctcttcagaat 176
               ||||||| ||||||||||| |||| |||||||||||||||||||||||  |||||  | |
Sbjct: 1653162 cagttctcgtcaaagtttggcccctgtatgatgcccaaaggcgaagctcatcttccaact 1653103

                                                                           
Query: 177     gctcagtctcgtggagttgatcttcactctcacaatgcaccctttcaagaaaatttttcc 236
               |||| |||||  ||||||  |||||| | |  |||| |||||||| ||| |||| |||||
Sbjct: 1653102 gctctgtctcacggagttcctcttcagtattgcaatccaccctttgaaggaaatgtttcc 1653043

                       
Query: 237     attcatct 244
               ||||||||
Sbjct: 1653042 attcatct 1653035
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
                scaffold, whole genome shotgun sequence
          Length = 22563205

 Score =  157 bits (79), Expect = 7e-036
 Identities = 118/131 (90%)
 Strand = Plus / Minus

                                                                            
Query: 353      gagaagggcaacatttgccgcacttttggagcatctggcatcgacataaaaagagaatta 412
                |||||||||||||| ||||| ||||||||||||  ||||||   ||| ||||||||||||
Sbjct: 22446172 gagaagggcaacatgtgccggacttttggagcacttggcatgtccatgaaaagagaatta 22446113

                                                                            
Query: 413      gcaaagaaagatatcctccttctagcatccaggtttgtagggacatccatagccgattcc 472
                |||||||| ||||||| |||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 22446112 gcaaagaatgatatccgccttctagcatccaggtttgtaggaacatccatagcagattcc 22446053

                           
Query: 473      ttcaccgtgag 483
                ||||| |||||
Sbjct: 22446052 ttcactgtgag 22446042

 Score =  107 bits (54), Expect = 6e-021
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                            
Query: 243      ctgggtagattttttgcaaataaaaaaggatggaaactccgtcctcattctgttctgcta 302
                |||| |||||||||||||| |||||||| || ||||| || || |||||||| ||| |||
Sbjct: 22446840 ctggatagattttttgcaagtaaaaaagaatagaaaccccatcttcattctggtcttcta 22446781

                                                                  
Query: 303      gtgcttgtgaagagaaaagaacatcttctttataataaggagtcaagaca 352
                 |||||| ||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 22446780 atgcttgggaagagaaaaggacatcttctttgtagtaaggagtcaagaca 22446731

 Score = 87.7 bits (44), Expect = 5e-015
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                            
Query: 117      cagttcttgtcaaagtttgtccccggtatgatgcccaaaggcgaagctgctcttcagaat 176
                ||||||| ||||||||||| |||| |||||||||||||||||||||||  |||||  | |
Sbjct: 22447068 cagttctcgtcaaagtttggcccctgtatgatgcccaaaggcgaagctcatcttccaact 22447009

                                                                            
Query: 177      gctcagtctcgtggagttgatcttcactctcacaatgcaccctttcaagaaaatttttcc 236
                |||| |||||  ||||||  |||||| | |  |||| |||||||| ||| |||| |||||
Sbjct: 22447008 gctctgtctcacggagttcctcttcagtattgcaatccaccctttgaaggaaatgtttcc 22446949

                        
Query: 237      attcatct 244
                ||||||||
Sbjct: 22446948 attcatct 22446941
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
                sequence
          Length = 36016269

 Score =  157 bits (79), Expect = 7e-036
 Identities = 118/131 (90%)
 Strand = Plus / Minus

                                                                            
Query: 353      gagaagggcaacatttgccgcacttttggagcatctggcatcgacataaaaagagaatta 412
                |||||||||||||| ||||| ||||||||||||  ||||||   ||| ||||||||||||
Sbjct: 35899236 gagaagggcaacatgtgccggacttttggagcacttggcatgtccatgaaaagagaatta 35899177

                                                                            
Query: 413      gcaaagaaagatatcctccttctagcatccaggtttgtagggacatccatagccgattcc 472
                |||||||| ||||||| |||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 35899176 gcaaagaatgatatccgccttctagcatccaggtttgtaggaacatccatagcagattcc 35899117

                           
Query: 473      ttcaccgtgag 483
                ||||| |||||
Sbjct: 35899116 ttcactgtgag 35899106

 Score =  107 bits (54), Expect = 6e-021
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                            
Query: 243      ctgggtagattttttgcaaataaaaaaggatggaaactccgtcctcattctgttctgcta 302
                |||| |||||||||||||| |||||||| || ||||| || || |||||||| ||| |||
Sbjct: 35899904 ctggatagattttttgcaagtaaaaaagaatagaaaccccatcttcattctggtcttcta 35899845

                                                                  
Query: 303      gtgcttgtgaagagaaaagaacatcttctttataataaggagtcaagaca 352
                 |||||| ||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 35899844 atgcttgggaagagaaaaggacatcttctttgtagtaaggagtcaagaca 35899795

 Score = 87.7 bits (44), Expect = 5e-015
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                            
Query: 117      cagttcttgtcaaagtttgtccccggtatgatgcccaaaggcgaagctgctcttcagaat 176
                ||||||| ||||||||||| |||| |||||||||||||||||||||||  |||||  | |
Sbjct: 35900132 cagttctcgtcaaagtttggcccctgtatgatgcccaaaggcgaagctcatcttccaact 35900073

                                                                            
Query: 177      gctcagtctcgtggagttgatcttcactctcacaatgcaccctttcaagaaaatttttcc 236
                |||| |||||  ||||||  |||||| | |  |||| |||||||| ||| |||| |||||
Sbjct: 35900072 gctctgtctcacggagttcctcttcagtattgcaatccaccctttgaaggaaatgtttcc 35900013

                        
Query: 237      attcatct 244
                ||||||||
Sbjct: 35900012 attcatct 35900005
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  157 bits (79), Expect = 7e-036
 Identities = 118/131 (90%)
 Strand = Plus / Minus

                                                                            
Query: 353      gagaagggcaacatttgccgcacttttggagcatctggcatcgacataaaaagagaatta 412
                |||||||||||||| ||||| ||||||||||||  ||||||   ||| ||||||||||||
Sbjct: 35816993 gagaagggcaacatgtgccggacttttggagcacttggcatgtccatgaaaagagaatta 35816934

                                                                            
Query: 413      gcaaagaaagatatcctccttctagcatccaggtttgtagggacatccatagccgattcc 472
                |||||||| ||||||| |||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 35816933 gcaaagaatgatatccgccttctagcatccaggtttgtaggaacatccatagcagattcc 35816874

                           
Query: 473      ttcaccgtgag 483
                ||||| |||||
Sbjct: 35816873 ttcactgtgag 35816863

 Score =  107 bits (54), Expect = 6e-021
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                            
Query: 243      ctgggtagattttttgcaaataaaaaaggatggaaactccgtcctcattctgttctgcta 302
                |||| |||||||||||||| |||||||| || ||||| || || |||||||| ||| |||
Sbjct: 35817661 ctggatagattttttgcaagtaaaaaagaatagaaaccccatcttcattctggtcttcta 35817602

                                                                  
Query: 303      gtgcttgtgaagagaaaagaacatcttctttataataaggagtcaagaca 352
                 |||||| ||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 35817601 atgcttgggaagagaaaaggacatcttctttgtagtaaggagtcaagaca 35817552

 Score = 87.7 bits (44), Expect = 5e-015
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                            
Query: 117      cagttcttgtcaaagtttgtccccggtatgatgcccaaaggcgaagctgctcttcagaat 176
                ||||||| ||||||||||| |||| |||||||||||||||||||||||  |||||  | |
Sbjct: 35817889 cagttctcgtcaaagtttggcccctgtatgatgcccaaaggcgaagctcatcttccaact 35817830

                                                                            
Query: 177      gctcagtctcgtggagttgatcttcactctcacaatgcaccctttcaagaaaatttttcc 236
                |||| |||||  ||||||  |||||| | |  |||| |||||||| ||| |||| |||||
Sbjct: 35817829 gctctgtctcacggagttcctcttcagtattgcaatccaccctttgaaggaaatgtttcc 35817770

                        
Query: 237      attcatct 244
                ||||||||
Sbjct: 35817769 attcatct 35817762
>ref|NT_107235.1| Oryza sativa (japonica cultivar-group)
          Length = 369247

 Score =  133 bits (67), Expect = 1e-028
 Identities = 115/131 (87%)
 Strand = Plus / Plus

                                                                          
Query: 353    gagaagggcaacatttgccgcacttttggagcatctggcatcgacataaaaagagaatta 412
              |||||||||||||| |||||||||||||||||||  ||||||  ||||||||||||||| 
Sbjct: 161295 gagaagggcaacatatgccgcacttttggagcattaggcatctccataaaaagagaattt 161354

                                                                          
Query: 413    gcaaagaaagatatcctccttctagcatccaggtttgtagggacatccatagccgattcc 472
              |||||||| |||||||  || |||||||| ||||| ||||||||||||||||| || || 
Sbjct: 161355 gcaaagaacgatatccgtctcctagcatcaaggttcgtagggacatccatagcagactct 161414

                         
Query: 473    ttcaccgtgag 483
              ||||| |||||
Sbjct: 161415 ttcacagtgag 161425

 Score = 69.9 bits (35), Expect = 1e-009
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                     
Query: 117    cagttcttgtcaaagtttgtccccggtatgatgcccaaaggcgaagctgctcttc 171
              ||||||||||||| || |||||||  |||||||||||||||||||||| ||||||
Sbjct: 160683 cagttcttgtcaatgtctgtcccctatatgatgcccaaaggcgaagctcctcttc 160737

 Score = 67.9 bits (34), Expect = 5e-009
 Identities = 91/110 (82%)
 Strand = Plus / Plus

                                                                          
Query: 243    ctgggtagattttttgcaaataaaaaaggatggaaactccgtcctcattctgttctgcta 302
              |||||||||||||||| || || ||||| |||||||| || ||||||||  | ||| | |
Sbjct: 160927 ctgggtagattttttgtaagtagaaaagtatggaaaccccatcctcatttggctcttcca 160986

                                                                
Query: 303    gtgcttgtgaagagaaaagaacatcttctttataataaggagtcaagaca 352
              |    || || ||||||||||||||||| || ||||||||||||||||||
Sbjct: 160987 gattatgagaggagaaaagaacatcttccttgtaataaggagtcaagaca 161036

 Score = 46.1 bits (23), Expect = 0.018
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 214    caccctttcaagaaaatttttccattcatct 244
              |||||| ||||| ||||||||||||||||||
Sbjct: 160780 caccctatcaaggaaatttttccattcatct 160810
>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0017G10
          Length = 166700

 Score =  133 bits (67), Expect = 1e-028
 Identities = 115/131 (87%)
 Strand = Plus / Plus

                                                                          
Query: 353    gagaagggcaacatttgccgcacttttggagcatctggcatcgacataaaaagagaatta 412
              |||||||||||||| |||||||||||||||||||  ||||||  ||||||||||||||| 
Sbjct: 161295 gagaagggcaacatatgccgcacttttggagcattaggcatctccataaaaagagaattt 161354

                                                                          
Query: 413    gcaaagaaagatatcctccttctagcatccaggtttgtagggacatccatagccgattcc 472
              |||||||| |||||||  || |||||||| ||||| ||||||||||||||||| || || 
Sbjct: 161355 gcaaagaacgatatccgtctcctagcatcaaggttcgtagggacatccatagcagactct 161414

                         
Query: 473    ttcaccgtgag 483
              ||||| |||||
Sbjct: 161415 ttcacagtgag 161425

 Score = 69.9 bits (35), Expect = 1e-009
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                     
Query: 117    cagttcttgtcaaagtttgtccccggtatgatgcccaaaggcgaagctgctcttc 171
              ||||||||||||| || |||||||  |||||||||||||||||||||| ||||||
Sbjct: 160683 cagttcttgtcaatgtctgtcccctatatgatgcccaaaggcgaagctcctcttc 160737

 Score = 67.9 bits (34), Expect = 5e-009
 Identities = 91/110 (82%)
 Strand = Plus / Plus

                                                                          
Query: 243    ctgggtagattttttgcaaataaaaaaggatggaaactccgtcctcattctgttctgcta 302
              |||||||||||||||| || || ||||| |||||||| || ||||||||  | ||| | |
Sbjct: 160927 ctgggtagattttttgtaagtagaaaagtatggaaaccccatcctcatttggctcttcca 160986

                                                                
Query: 303    gtgcttgtgaagagaaaagaacatcttctttataataaggagtcaagaca 352
              |    || || ||||||||||||||||| || ||||||||||||||||||
Sbjct: 160987 gattatgagaggagaaaagaacatcttccttgtaataaggagtcaagaca 161036

 Score = 46.1 bits (23), Expect = 0.018
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 214    caccctttcaagaaaatttttccattcatct 244
              |||||| ||||| ||||||||||||||||||
Sbjct: 160780 caccctatcaaggaaatttttccattcatct 160810
>dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0069C14
          Length = 150579

 Score =  133 bits (67), Expect = 1e-028
 Identities = 115/131 (87%)
 Strand = Plus / Plus

                                                                         
Query: 353   gagaagggcaacatttgccgcacttttggagcatctggcatcgacataaaaagagaatta 412
             |||||||||||||| |||||||||||||||||||  ||||||  ||||||||||||||| 
Sbjct: 22497 gagaagggcaacatatgccgcacttttggagcattaggcatctccataaaaagagaattt 22556

                                                                         
Query: 413   gcaaagaaagatatcctccttctagcatccaggtttgtagggacatccatagccgattcc 472
             |||||||| |||||||  || |||||||| ||||| ||||||||||||||||| || || 
Sbjct: 22557 gcaaagaacgatatccgtctcctagcatcaaggttcgtagggacatccatagcagactct 22616

                        
Query: 473   ttcaccgtgag 483
             ||||| |||||
Sbjct: 22617 ttcacagtgag 22627

 Score = 69.9 bits (35), Expect = 1e-009
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                    
Query: 117   cagttcttgtcaaagtttgtccccggtatgatgcccaaaggcgaagctgctcttc 171
             ||||||||||||| || |||||||  |||||||||||||||||||||| ||||||
Sbjct: 21885 cagttcttgtcaatgtctgtcccctatatgatgcccaaaggcgaagctcctcttc 21939

 Score = 67.9 bits (34), Expect = 5e-009
 Identities = 91/110 (82%)
 Strand = Plus / Plus

                                                                         
Query: 243   ctgggtagattttttgcaaataaaaaaggatggaaactccgtcctcattctgttctgcta 302
             |||||||||||||||| || || ||||| |||||||| || ||||||||  | ||| | |
Sbjct: 22129 ctgggtagattttttgtaagtagaaaagtatggaaaccccatcctcatttggctcttcca 22188

                                                               
Query: 303   gtgcttgtgaagagaaaagaacatcttctttataataaggagtcaagaca 352
             |    || || ||||||||||||||||| || ||||||||||||||||||
Sbjct: 22189 gattatgagaggagaaaagaacatcttccttgtaataaggagtcaagaca 22238

 Score = 46.1 bits (23), Expect = 0.018
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 214   caccctttcaagaaaatttttccattcatct 244
             |||||| ||||| ||||||||||||||||||
Sbjct: 21982 caccctatcaaggaaatttttccattcatct 22012
>gb|AACV01014976.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014976, whole
             genome shotgun sequence
          Length = 21689

 Score =  133 bits (67), Expect = 1e-028
 Identities = 115/131 (87%)
 Strand = Plus / Minus

                                                                         
Query: 353   gagaagggcaacatttgccgcacttttggagcatctggcatcgacataaaaagagaatta 412
             |||||||||||||| |||||||||||||||||||  ||||||  ||||||||||||||| 
Sbjct: 19788 gagaagggcaacatatgccgcacttttggagcattaggcatctccataaaaagagaattt 19729

                                                                         
Query: 413   gcaaagaaagatatcctccttctagcatccaggtttgtagggacatccatagccgattcc 472
             |||||||| |||||||  || |||||||| ||||| ||||||||||||||||| || || 
Sbjct: 19728 gcaaagaacgatatccgtctcctagcatcaaggttcgtagggacatccatagcagactct 19669

                        
Query: 473   ttcaccgtgag 483
             ||||| |||||
Sbjct: 19668 ttcacagtgag 19658

 Score = 69.9 bits (35), Expect = 1e-009
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                    
Query: 117   cagttcttgtcaaagtttgtccccggtatgatgcccaaaggcgaagctgctcttc 171
             ||||||||||||| || |||||||  |||||||||||||||||||||| ||||||
Sbjct: 20400 cagttcttgtcaatgtctgtcccctatatgatgcccaaaggcgaagctcctcttc 20346

 Score = 67.9 bits (34), Expect = 5e-009
 Identities = 91/110 (82%)
 Strand = Plus / Minus

                                                                         
Query: 243   ctgggtagattttttgcaaataaaaaaggatggaaactccgtcctcattctgttctgcta 302
             |||||||||||||||| || || ||||| |||||||| || ||||||||  | ||| | |
Sbjct: 20156 ctgggtagattttttgtaagtagaaaagtatggaaaccccatcctcatttggctcttcca 20097

                                                               
Query: 303   gtgcttgtgaagagaaaagaacatcttctttataataaggagtcaagaca 352
             |    || || ||||||||||||||||| || ||||||||||||||||||
Sbjct: 20096 gattatgagaggagaaaagaacatcttccttgtaataaggagtcaagaca 20047

 Score = 46.1 bits (23), Expect = 0.018
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 214   caccctttcaagaaaatttttccattcatct 244
             |||||| ||||| ||||||||||||||||||
Sbjct: 20303 caccctatcaaggaaatttttccattcatct 20273
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
                scaffold, whole genome shotgun sequence
          Length = 12033173

 Score =  133 bits (67), Expect = 1e-028
 Identities = 115/131 (87%)
 Strand = Plus / Plus

                                                                            
Query: 353      gagaagggcaacatttgccgcacttttggagcatctggcatcgacataaaaagagaatta 412
                |||||||||||||| |||||||||||||||||||  ||||||  ||||||||||||||| 
Sbjct: 11857126 gagaagggcaacatatgccgcacttttggagcattaggcatctccataaaaagagaattt 11857185

                                                                            
Query: 413      gcaaagaaagatatcctccttctagcatccaggtttgtagggacatccatagccgattcc 472
                |||||||| |||||||  || |||||||| ||||| ||||||||||||||||| || || 
Sbjct: 11857186 gcaaagaacgatatccgtctcctagcatcaaggttcgtagggacatccatagcagactct 11857245

                           
Query: 473      ttcaccgtgag 483
                ||||| |||||
Sbjct: 11857246 ttcacagtgag 11857256

 Score = 69.9 bits (35), Expect = 1e-009
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                       
Query: 117      cagttcttgtcaaagtttgtccccggtatgatgcccaaaggcgaagctgctcttc 171
                ||||||||||||| || |||||||  |||||||||||||||||||||| ||||||
Sbjct: 11856514 cagttcttgtcaatgtctgtcccctatatgatgcccaaaggcgaagctcctcttc 11856568

 Score = 67.9 bits (34), Expect = 5e-009
 Identities = 91/110 (82%)
 Strand = Plus / Plus

                                                                            
Query: 243      ctgggtagattttttgcaaataaaaaaggatggaaactccgtcctcattctgttctgcta 302
                |||||||||||||||| || || ||||| |||||||| || ||||||||  | ||| | |
Sbjct: 11856758 ctgggtagattttttgtaagtagaaaagtatggaaaccccatcctcatttggctcttcca 11856817

                                                                  
Query: 303      gtgcttgtgaagagaaaagaacatcttctttataataaggagtcaagaca 352
                |    || || ||||||||||||||||| || ||||||||||||||||||
Sbjct: 11856818 gattatgagaggagaaaagaacatcttccttgtaataaggagtcaagaca 11856867

 Score = 46.1 bits (23), Expect = 0.018
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 214      caccctttcaagaaaatttttccattcatct 244
                |||||| ||||| ||||||||||||||||||
Sbjct: 11856611 caccctatcaaggaaatttttccattcatct 11856641
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
                sequence
          Length = 29740507

 Score =  133 bits (67), Expect = 1e-028
 Identities = 115/131 (87%)
 Strand = Plus / Plus

                                                                            
Query: 353      gagaagggcaacatttgccgcacttttggagcatctggcatcgacataaaaagagaatta 412
                |||||||||||||| |||||||||||||||||||  ||||||  ||||||||||||||| 
Sbjct: 29555863 gagaagggcaacatatgccgcacttttggagcattaggcatctccataaaaagagaattt 29555922

                                                                            
Query: 413      gcaaagaaagatatcctccttctagcatccaggtttgtagggacatccatagccgattcc 472
                |||||||| |||||||  || |||||||| ||||| ||||||||||||||||| || || 
Sbjct: 29555923 gcaaagaacgatatccgtctcctagcatcaaggttcgtagggacatccatagcagactct 29555982

                           
Query: 473      ttcaccgtgag 483
                ||||| |||||
Sbjct: 29555983 ttcacagtgag 29555993

 Score = 69.9 bits (35), Expect = 1e-009
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                       
Query: 117      cagttcttgtcaaagtttgtccccggtatgatgcccaaaggcgaagctgctcttc 171
                ||||||||||||| || |||||||  |||||||||||||||||||||| ||||||
Sbjct: 29555251 cagttcttgtcaatgtctgtcccctatatgatgcccaaaggcgaagctcctcttc 29555305

 Score = 67.9 bits (34), Expect = 5e-009
 Identities = 91/110 (82%)
 Strand = Plus / Plus

                                                                            
Query: 243      ctgggtagattttttgcaaataaaaaaggatggaaactccgtcctcattctgttctgcta 302
                |||||||||||||||| || || ||||| |||||||| || ||||||||  | ||| | |
Sbjct: 29555495 ctgggtagattttttgtaagtagaaaagtatggaaaccccatcctcatttggctcttcca 29555554

                                                                  
Query: 303      gtgcttgtgaagagaaaagaacatcttctttataataaggagtcaagaca 352
                |    || || ||||||||||||||||| || ||||||||||||||||||
Sbjct: 29555555 gattatgagaggagaaaagaacatcttccttgtaataaggagtcaagaca 29555604

 Score = 46.1 bits (23), Expect = 0.018
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 214      caccctttcaagaaaatttttccattcatct 244
                |||||| ||||| ||||||||||||||||||
Sbjct: 29555348 caccctatcaaggaaatttttccattcatct 29555378
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  133 bits (67), Expect = 1e-028
 Identities = 115/131 (87%)
 Strand = Plus / Plus

                                                                            
Query: 353      gagaagggcaacatttgccgcacttttggagcatctggcatcgacataaaaagagaatta 412
                |||||||||||||| |||||||||||||||||||  ||||||  ||||||||||||||| 
Sbjct: 30523934 gagaagggcaacatatgccgcacttttggagcattaggcatctccataaaaagagaattt 30523993

                                                                            
Query: 413      gcaaagaaagatatcctccttctagcatccaggtttgtagggacatccatagccgattcc 472
                |||||||| |||||||  || |||||||| ||||| ||||||||||||||||| || || 
Sbjct: 30523994 gcaaagaacgatatccgtctcctagcatcaaggttcgtagggacatccatagcagactct 30524053

                           
Query: 473      ttcaccgtgag 483
                ||||| |||||
Sbjct: 30524054 ttcacagtgag 30524064

 Score = 69.9 bits (35), Expect = 1e-009
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                       
Query: 117      cagttcttgtcaaagtttgtccccggtatgatgcccaaaggcgaagctgctcttc 171
                ||||||||||||| || |||||||  |||||||||||||||||||||| ||||||
Sbjct: 30523322 cagttcttgtcaatgtctgtcccctatatgatgcccaaaggcgaagctcctcttc 30523376

 Score = 67.9 bits (34), Expect = 5e-009
 Identities = 91/110 (82%)
 Strand = Plus / Plus

                                                                            
Query: 243      ctgggtagattttttgcaaataaaaaaggatggaaactccgtcctcattctgttctgcta 302
                |||||||||||||||| || || ||||| |||||||| || ||||||||  | ||| | |
Sbjct: 30523566 ctgggtagattttttgtaagtagaaaagtatggaaaccccatcctcatttggctcttcca 30523625

                                                                  
Query: 303      gtgcttgtgaagagaaaagaacatcttctttataataaggagtcaagaca 352
                |    || || ||||||||||||||||| || ||||||||||||||||||
Sbjct: 30523626 gattatgagaggagaaaagaacatcttccttgtaataaggagtcaagaca 30523675

 Score = 46.1 bits (23), Expect = 0.018
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 214      caccctttcaagaaaatttttccattcatct 244
                |||||| ||||| ||||||||||||||||||
Sbjct: 30523419 caccctatcaaggaaatttttccattcatct 30523449
>gb|AZ126558.1|AZ126558 OSJNBb0078B11r CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
           cultivar-group) genomic clone OSJNBb0078B11r, DNA
           sequence
          Length = 834

 Score = 71.9 bits (36), Expect = 3e-010
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 117 cagttcttgtcaaagtttgtccccggtatgatgcccaaaggcgaagct 164
           ||||||| ||||||||||| |||| |||||||||||||||||||||||
Sbjct: 532 cagttctcgtcaaagtttggcccctgtatgatgcccaaaggcgaagct 579
>dbj|AG210767.1| Oryza sativa (japonica cultivar-group) DNA, clone:NF2786_0_501_1A,
           3' flanking sequence of Tos17 insertion in rice strain
           NF2786, genomic survey sequence
          Length = 778

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 430 ccttctagcatccaggtttgtagggacatccatagccgattccttcaccgtgagtaa 486
           ||||||||| ||||| ||||  |||||||||||||| || || ||||| ||||||||
Sbjct: 250 ccttctagcctccagatttgaggggacatccatagcagactctttcacagtgagtaa 194
>dbj|AG023962.1| Oryza sativa (japonica cultivar-group) DNA, clone:ND2066_0_502_1A,
           3' flanking sequence of Tos17 insertion in rice strain
           ND2066, genomic survey sequence
          Length = 662

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 430 ccttctagcatccaggtttgtagggacatccatagccgattccttcaccgtgagtaa 486
           ||||||||| ||||| ||||  |||||||||||||| || || ||||| ||||||||
Sbjct: 552 ccttctagcctccagatttgaggggacatccatagcagactctttcacagtgagtaa 496
>gb|AC104427.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1015F07,
              complete sequence
          Length = 117612

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                       
Query: 430    ccttctagcatccaggtttgtagggacatccatagccgattccttcaccgtgagtaa 486
              ||||||||| ||||| ||||  |||||||||||||| || || ||||| ||||||||
Sbjct: 105352 ccttctagcctccagatttgaggggacatccatagcagactctttcacagtgagtaa 105408
>gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07,
             complete sequence
          Length = 127098

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                      
Query: 430   ccttctagcatccaggtttgtagggacatccatagccgattccttcaccgtgagtaa 486
             ||||||||| ||||| ||||  |||||||||||||| || || ||||| ||||||||
Sbjct: 47740 ccttctagcctccagatttgaggggacatccatagcagactctttcacagtgagtaa 47796
>gb|AACV01005795.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg005795, whole
             genome shotgun sequence
          Length = 23395

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                      
Query: 430   ccttctagcatccaggtttgtagggacatccatagccgattccttcaccgtgagtaa 486
             ||||||||| ||||| ||||  |||||||||||||| || || ||||| ||||||||
Sbjct: 15694 ccttctagcctccagatttgaggggacatccatagcagactctttcacagtgagtaa 15638
>ref|NM_187591.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 4929

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 430  ccttctagcatccaggtttgtagggacatccatagccgattccttcaccgtgagtaa 486
            ||||||||| ||||| ||||  |||||||||||||| || || ||||| ||||||||
Sbjct: 2196 ccttctagcctccagatttgaggggacatccatagcagactctttcacagtgagtaa 2140

 Score = 46.1 bits (23), Expect = 0.018
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 233  ttccattcatctgggtagattttttgcaaataaaaaaggatggaaactccgtcctcatt 291
            ||||||||||||||||| ||||| || |  || || ||| |||||||||| ||||||||
Sbjct: 2393 ttccattcatctgggtaaattttctgtaggtagaatagggtggaaactccatcctcatt 2335
>ref|NT_107183.1| Oryza sativa (japonica cultivar-group)
          Length = 1680144

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                        
Query: 430     ccttctagcatccaggtttgtagggacatccatagccgattccttcaccgtgagtaa 486
               ||||||||| ||||| ||||  |||||||||||||| || || ||||| ||||||||
Sbjct: 1568177 ccttctagcctccagatttgaggggacatccatagcagactctttcacagtgagtaa 1568233
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
               scaffold, whole genome shotgun sequence
          Length = 13858245

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                        
Query: 430     ccttctagcatccaggtttgtagggacatccatagccgattccttcaccgtgagtaa 486
               ||||||||| ||||| ||||  |||||||||||||| || || ||||| ||||||||
Sbjct: 1574233 ccttctagcctccagatttgaggggacatccatagcagactctttcacagtgagtaa 1574289
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
               sequence
          Length = 37803064

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                        
Query: 430     ccttctagcatccaggtttgtagggacatccatagccgattccttcaccgtgagtaa 486
               ||||||||| ||||| ||||  |||||||||||||| || || ||||| ||||||||
Sbjct: 1766595 ccttctagcctccagatttgaggggacatccatagcagactctttcacagtgagtaa 1766651
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                        
Query: 430     ccttctagcatccaggtttgtagggacatccatagccgattccttcaccgtgagtaa 486
               ||||||||| ||||| ||||  |||||||||||||| || || ||||| ||||||||
Sbjct: 1568177 ccttctagcctccagatttgaggggacatccatagcagactctttcacagtgagtaa 1568233
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                        
Query: 430     ccttctagcatccaggtttgtagggacatccatagccgattccttcaccgtgagtaa 486
               ||||||||| ||||| ||||  |||||||||||||| || || ||||| ||||||||
Sbjct: 1568179 ccttctagcctccagatttgaggggacatccatagcagactctttcacagtgagtaa 1568235
>ref|NM_193204.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 4710

 Score = 46.1 bits (23), Expect = 0.018
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 221  tcaagaaaatttttccattcatctgggtagatttt 255
            ||||||||||| |||||||||||||| || |||||
Sbjct: 3389 tcaagaaaattcttccattcatctggatatatttt 3355
>gb|CF328591.1|CF328591 NACL--03-J03.b1 Rice callus plasmid cDNA library (NACL) Oryza
          sativa (japonica cultivar-group) cDNA clone
          NACL--03-J03, mRNA sequence
          Length = 570

 Score = 44.1 bits (22), Expect = 0.073
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                            
Query: 66 agaattcatcagtgctgatactaaatctttcttg 99
          ||||| |||||| |||||||| ||||||||||||
Sbjct: 84 agaatccatcagggctgataccaaatctttcttg 51
>gb|CF329508.1|CF329508 NACL--04-N18.b1 Rice callus plasmid cDNA library (NACL) Oryza
          sativa (japonica cultivar-group) cDNA clone
          NACL--04-N18, mRNA sequence
          Length = 550

 Score = 44.1 bits (22), Expect = 0.073
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                            
Query: 66 agaattcatcagtgctgatactaaatctttcttg 99
          ||||| |||||| |||||||| ||||||||||||
Sbjct: 84 agaatccatcagggctgataccaaatctttcttg 51
>dbj|AK064082.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-B04, full
           insert sequence
          Length = 1832

 Score = 44.1 bits (22), Expect = 0.073
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 66  agaattcatcagtgctgatactaaatctttcttg 99
           ||||| |||||| |||||||| ||||||||||||
Sbjct: 375 agaatccatcagggctgataccaaatctttcttg 342
>dbj|AK101426.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033038E19, full
           insert sequence
          Length = 1836

 Score = 44.1 bits (22), Expect = 0.073
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 66  agaattcatcagtgctgatactaaatctttcttg 99
           ||||| |||||| |||||||| ||||||||||||
Sbjct: 379 agaatccatcagggctgataccaaatctttcttg 346
>gb|AACV01002509.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002509, whole
             genome shotgun sequence
          Length = 69030

 Score = 44.1 bits (22), Expect = 0.073
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 66    agaattcatcagtgctgatactaaatctttcttg 99
             ||||| |||||| |||||||| ||||||||||||
Sbjct: 23061 agaatccatcagggctgataccaaatctttcttg 23028
>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0003D09
          Length = 161970

 Score = 44.1 bits (22), Expect = 0.073
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 66    agaattcatcagtgctgatactaaatctttcttg 99
             ||||| |||||| |||||||| ||||||||||||
Sbjct: 45183 agaatccatcagggctgataccaaatctttcttg 45150
>dbj|AP003293.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0691E06
          Length = 166497

 Score = 44.1 bits (22), Expect = 0.073
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 66     agaattcatcagtgctgatactaaatctttcttg 99
              ||||| |||||| |||||||| ||||||||||||
Sbjct: 152787 agaatccatcagggctgataccaaatctttcttg 152754
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43342410

 Score = 44.1 bits (22), Expect = 0.073
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 66       agaattcatcagtgctgatactaaatctttcttg 99
                ||||| |||||| |||||||| ||||||||||||
Sbjct: 33994410 agaatccatcagggctgataccaaatctttcttg 33994377

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 221      tcaagaaaatttttccattcatctg 245
                ||||||||||| |||||||||||||
Sbjct: 19342476 tcaagaaaattcttccattcatctg 19342500
>ref|NM_190932.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1482

 Score = 44.1 bits (22), Expect = 0.073
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 66  agaattcatcagtgctgatactaaatctttcttg 99
           ||||| |||||| |||||||| ||||||||||||
Sbjct: 327 agaatccatcagggctgataccaaatctttcttg 294
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
          Length = 14818989

 Score = 44.1 bits (22), Expect = 0.073
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 66      agaattcatcagtgctgatactaaatctttcttg 99
               ||||| |||||| |||||||| ||||||||||||
Sbjct: 8441793 agaatccatcagggctgataccaaatctttcttg 8441760
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
               scaffold, whole genome shotgun sequence
          Length = 17394610

 Score = 44.1 bits (22), Expect = 0.073
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 66      agaattcatcagtgctgatactaaatctttcttg 99
               ||||| |||||| |||||||| ||||||||||||
Sbjct: 8305570 agaatccatcagggctgataccaaatctttcttg 8305537
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
                sequence
          Length = 42596331

 Score = 44.1 bits (22), Expect = 0.073
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 66       agaattcatcagtgctgatactaaatctttcttg 99
                ||||| |||||| |||||||| ||||||||||||
Sbjct: 33507291 agaatccatcagggctgataccaaatctttcttg 33507258

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 221      tcaagaaaatttttccattcatctg 245
                ||||||||||| |||||||||||||
Sbjct: 19018717 tcaagaaaattcttccattcatctg 19018741
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.073
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 66       agaattcatcagtgctgatactaaatctttcttg 99
                ||||| |||||| |||||||| ||||||||||||
Sbjct: 33913740 agaatccatcagggctgataccaaatctttcttg 33913707

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 221      tcaagaaaatttttccattcatctg 245
                ||||||||||| |||||||||||||
Sbjct: 19263759 tcaagaaaattcttccattcatctg 19263783
>gb|AQ574894.1|AQ574894 nbxb0086E18f CUGI Rice BAC Library Oryza sativa (japonica
           cultivar-group) genomic clone nbxb0086E18f, DNA sequence
          Length = 704

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 221 tcaagaaaatttttccattcatctg 245
           ||||||||||| |||||||||||||
Sbjct: 476 tcaagaaaattcttccattcatctg 500
>gb|AACV01001409.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001409, whole
             genome shotgun sequence
          Length = 30879

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 221   tcaagaaaatttttccattcatctg 245
             ||||||||||| |||||||||||||
Sbjct: 16794 tcaagaaaattcttccattcatctg 16818
>ref|NT_079926.2| Oryza sativa (japonica cultivar-group)
          Length = 8469246

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 221     tcaagaaaatttttccattcatctg 245
               ||||||||||| |||||||||||||
Sbjct: 2260708 tcaagaaaattcttccattcatctg 2260732
>dbj|AP003447.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1619_F12
          Length = 133028

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 221   tcaagaaaatttttccattcatctg 245
             ||||||||||| |||||||||||||
Sbjct: 83380 tcaagaaaattcttccattcatctg 83404
>gb|CH401166.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000003 genomic
               scaffold, whole genome shotgun sequence
          Length = 8539496

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 221     tcaagaaaatttttccattcatctg 245
               ||||||||||| |||||||||||||
Sbjct: 2393594 tcaagaaaattcttccattcatctg 2393618
  Database: Oryza_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:41 PM
  Number of letters in database: 2,800,419,916
  Number of sequences in database:  438,736
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 863,606
Number of Sequences: 438736
Number of extensions: 863606
Number of successful extensions: 23130
Number of sequences better than  0.5: 49
Number of HSP's better than  0.5 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 22254
Number of HSP's gapped (non-prelim): 866
length of query: 513
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 492
effective length of database: 2,791,206,460
effective search space: 1373273578320
effective search space used: 1373273578320
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)