BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCF7a10.yg.2.1
(523 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB644530.1|CB644530 OSJNEb05M15.f OSJNEb Oryza sativa (j... 307 3e-081
gb|CB656792.1|CB656792 OSJNEc11I12.f OSJNEc Oryza sativa (j... 307 3e-081
dbj|AB099292.1| Oryza sativa (japonica cultivar-group) OsUE... 307 3e-081
dbj|AK065715.1| Oryza sativa (japonica cultivar-group) cDNA... 307 3e-081
dbj|AK099222.1| Oryza sativa (japonica cultivar-group) cDNA... 307 3e-081
ref|XM_479925.1| Oryza sativa (japonica cultivar-group), mRNA 307 3e-081
ref|XM_507116.1| PREDICTED Oryza sativa (japonica cultivar-... 307 3e-081
dbj|AP003879.1| Oryza sativa (japonica cultivar-group) chro... 135 3e-029
dbj|AP004591.3| Oryza sativa (japonica cultivar-group) geno... 135 3e-029
gb|AACV01017191.1| Oryza sativa (japonica cultivar-group) c... 135 3e-029
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 135 3e-029
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 135 3e-029
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 135 3e-029
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 135 3e-029
gb|D41876.1|D41876 RICS4842A Rice shoot Oryza sativa (japon... 78 5e-012
gb|CB644395.1|CB644395 OSJNEb05J11.f OSJNEb Oryza sativa (j... 78 5e-012
gb|CB644459.1|CB644459 OSJNEb05K24.f OSJNEb Oryza sativa (j... 78 5e-012
gb|CB647320.1|CB647320 OSJNEb10D06.f OSJNEb Oryza sativa (j... 78 5e-012
gb|CB663075.1|CB663075 OSJNEd07K12.f OSJNEd Oryza sativa (j... 78 5e-012
gb|CB664607.1|CB664607 OSJNEd10G21.f OSJNEd Oryza sativa (j... 78 5e-012
emb|AL607094.1|OSJN01001 Oryza sativa (japonica cultivar-gr... 78 5e-012
emb|AL607095.1|OSJN01003 Oryza sativa (japonica cultivar-gr... 78 5e-012
dbj|AB096864.1| Oryza sativa (japonica cultivar-group) OsUE... 78 5e-012
dbj|AP003829.2| Oryza sativa (japonica cultivar-group) geno... 78 5e-012
dbj|AK059685.1| Oryza sativa (japonica cultivar-group) cDNA... 78 5e-012
dbj|AK065558.1| Oryza sativa (japonica cultivar-group) cDNA... 78 5e-012
dbj|AK099140.1| Oryza sativa (japonica cultivar-group) cDNA... 78 5e-012
dbj|AK099183.1| Oryza sativa (japonica cultivar-group) cDNA... 78 5e-012
dbj|AP004314.3| Oryza sativa (japonica cultivar-group) geno... 78 5e-012
gb|AACV01015146.1| Oryza sativa (japonica cultivar-group) c... 78 5e-012
ref|XM_476598.1| Oryza sativa (japonica cultivar-group), mRNA 78 5e-012
ref|XM_506159.2| PREDICTED Oryza sativa (japonica cultivar-... 78 5e-012
ref|XM_507350.1| PREDICTED Oryza sativa (japonica cultivar-... 78 5e-012
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 78 5e-012
gb|CH401219.1| Oryza sativa (japonica cultivar-group) chrom... 78 5e-012
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 78 5e-012
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 78 5e-012
gb|CB651858.1|CB651858 OSJNEb16P24.f OSJNEb Oryza sativa (j... 70 1e-009
gb|CB665595.1|CB665595 OSJNEd12B20.f OSJNEd Oryza sativa (j... 68 5e-009
gb|AACV01010487.1| Oryza sativa (japonica cultivar-group) c... 66 2e-008
ref|NT_107200.1| Oryza sativa (japonica cultivar-group) 66 2e-008
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 66 2e-008
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 66 2e-008
emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromoso... 66 2e-008
emb|AL606648.3|OSJN00093 Oryza sativa genomic DNA, chromoso... 66 2e-008
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 66 2e-008
gb|CB651700.1|CB651700 OSJNEb16M10.f OSJNEb Oryza sativa (j... 60 1e-006
gb|CB662313.1|CB662313 OSJNEd06D10.f OSJNEd Oryza sativa (j... 60 1e-006
gb|CB662314.1|CB662314 OSJNEd06D10.r OSJNEd Oryza sativa (j... 60 1e-006
gb|CB662315.1|CB662315 OSJNEd06D11.f OSJNEd Oryza sativa (j... 60 1e-006
dbj|AB097461.1| Oryza sativa (japonica cultivar-group) mRNA... 60 1e-006
dbj|AK060820.1| Oryza sativa (japonica cultivar-group) cDNA... 60 1e-006
dbj|AK065875.1| Oryza sativa (japonica cultivar-group) cDNA... 60 1e-006
dbj|AK102657.1| Oryza sativa (japonica cultivar-group) cDNA... 60 1e-006
ref|XM_473906.1| Oryza sativa (japonica cultivar-group), p... 60 1e-006
gb|CA758729.1|CA758729 BR040013000_PLATE_E12_93_098.ab1 OA ... 54 8e-005
gb|CF293645.1|CF293645 30DGS--02-O12.b1 Rice leaf plasmid c... 54 8e-005
>gb|CB644530.1|CB644530 OSJNEb05M15.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb05M15 5', mRNA sequence
Length = 835
Score = 307 bits (155), Expect = 3e-081
Identities = 242/271 (89%)
Strand = Plus / Plus
Query: 1 actttgatgcaaggcggaagcctcgtaatgttggaaaaatcattgcagccctggtcctca 60
|||| ||||| ||||||||||||| ||||||||| ||| | |||||||| ||||||||||
Sbjct: 348 acttcgatgctaggcggaagcctcataatgttgggaaagttattgcagctctggtcctca 407
Query: 61 caacactctgtatatttgctctgaagcaatctcctggttttggtggcaatagtgtgtttt 120
||||||| ||||||||| | ||||||||||||||||||||||||||| |||||||||||
Sbjct: 408 caacactatgtatatttattttgaagcaatctcctggttttggtggcagtagtgtgtttt 467
Query: 121 ctcgccatgaacctggtgttacccacgtcttagtaacaggaggagctggttatattggtt 180
|||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| |
Sbjct: 468 ctcgccatgaacctggtgttactcatgtcttagtaacaggaggagctggctatattgggt 527
Query: 181 cacatgccgctttaaggctcttacaggatagctatcgagttaccattgtggataatctat 240
||||||| | ||| | || ||| |||| | |||||||||||||||||||| ||||| |
Sbjct: 528 cacatgcttcattacgcctgttaaaggacaattatcgagttaccattgtggacaatcttt 587
Query: 241 ctagaggaaatatgggagcagtaaaggttct 271
|||||||||| ||||||||||||||||||||
Sbjct: 588 ctagaggaaacatgggagcagtaaaggttct 618
Score = 93.7 bits (47), Expect = 9e-017
Identities = 77/88 (87%)
Strand = Plus / Plus
Query: 436 gtcaacaagatatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngct 495
||||||||||| ||||| || ||||| ||||||||||| ||||||||||| |||| ||
Sbjct: 686 gtcaacaagatctttgccganaatgcgtttgatgctgttatgcactttgctgctgttgcc 745
Query: 496 tatgtgggagagagcacattggaacccc 523
|||||||| ||||| |||||||||||||
Sbjct: 746 tatgtgggtgagagtacattggaacccc 773
>gb|CB656792.1|CB656792 OSJNEc11I12.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11I12 5', mRNA sequence
Length = 807
Score = 307 bits (155), Expect = 3e-081
Identities = 242/271 (89%)
Strand = Plus / Plus
Query: 1 actttgatgcaaggcggaagcctcgtaatgttggaaaaatcattgcagccctggtcctca 60
|||| ||||| ||||||||||||| ||||||||| ||| | |||||||| ||||||||||
Sbjct: 228 acttcgatgctaggcggaagcctcataatgttgggaaagttattgcagctctggtcctca 287
Query: 61 caacactctgtatatttgctctgaagcaatctcctggttttggtggcaatagtgtgtttt 120
||||||| ||||||||| | ||||||||||||||||||||||||||| |||||||||||
Sbjct: 288 caacactatgtatatttattttgaagcaatctcctggttttggtggcagtagtgtgtttt 347
Query: 121 ctcgccatgaacctggtgttacccacgtcttagtaacaggaggagctggttatattggtt 180
|||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| |
Sbjct: 348 ctcgccatgaacctggtgttactcatgtcttagtaacaggaggagctggctatattgggt 407
Query: 181 cacatgccgctttaaggctcttacaggatagctatcgagttaccattgtggataatctat 240
||||||| | ||| | || ||| |||| | |||||||||||||||||||| ||||| |
Sbjct: 408 cacatgcttcattacgcctgttaaaggacaattatcgagttaccattgtggacaatcttt 467
Query: 241 ctagaggaaatatgggagcagtaaaggttct 271
|||||||||| ||||||||||||||||||||
Sbjct: 468 ctagaggaaacatgggagcagtaaaggttct 498
Score = 99.6 bits (50), Expect = 1e-018
Identities = 78/88 (88%)
Strand = Plus / Plus
Query: 436 gtcaacaagatatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngct 495
||||||||||| ||||| |||||||| ||||||||||| ||||||||||| |||| ||
Sbjct: 567 gtcaacaagatctttgccgaaaatgcgtttgatgctgttatgcactttgctgctgttgcc 626
Query: 496 tatgtgggagagagcacattggaacccc 523
|||||||| ||||| |||||||||||||
Sbjct: 627 tatgtgggtgagagtacattggaacccc 654
>dbj|AB099292.1| Oryza sativa (japonica cultivar-group) OsUEL-3 mRNA for
UDP-galactose 4-epimerase-like protein, complete cds
Length = 1412
Score = 307 bits (155), Expect = 3e-081
Identities = 242/271 (89%)
Strand = Plus / Plus
Query: 1 actttgatgcaaggcggaagcctcgtaatgttggaaaaatcattgcagccctggtcctca 60
|||| ||||| ||||||||||||| ||||||||| ||| | |||||||| ||||||||||
Sbjct: 136 acttcgatgctaggcggaagcctcataatgttgggaaagttattgcagctctggtcctca 195
Query: 61 caacactctgtatatttgctctgaagcaatctcctggttttggtggcaatagtgtgtttt 120
||||||| ||||||||| | ||||||||||||||||||||||||||| |||||||||||
Sbjct: 196 caacactatgtatatttattttgaagcaatctcctggttttggtggcagtagtgtgtttt 255
Query: 121 ctcgccatgaacctggtgttacccacgtcttagtaacaggaggagctggttatattggtt 180
|||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| |
Sbjct: 256 ctcgccatgaacctggtgttactcatgtcttagtaacaggaggagctggctatattgggt 315
Query: 181 cacatgccgctttaaggctcttacaggatagctatcgagttaccattgtggataatctat 240
||||||| | ||| | || ||| |||| | |||||||||||||||||||| ||||| |
Sbjct: 316 cacatgcttcattacgcctgttaaaggacaattatcgagttaccattgtggacaatcttt 375
Query: 241 ctagaggaaatatgggagcagtaaaggttct 271
|||||||||| ||||||||||||||||||||
Sbjct: 376 ctagaggaaacatgggagcagtaaaggttct 406
Score = 99.6 bits (50), Expect = 1e-018
Identities = 78/88 (88%)
Strand = Plus / Plus
Query: 436 gtcaacaagatatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngct 495
||||||||||| ||||| |||||||| ||||||||||| ||||||||||| |||| ||
Sbjct: 474 gtcaacaagatctttgccgaaaatgcgtttgatgctgttatgcactttgctgctgttgcc 533
Query: 496 tatgtgggagagagcacattggaacccc 523
|||||||| ||||| |||||||||||||
Sbjct: 534 tatgtgggtgagagtacattggaacccc 561
>dbj|AK065715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041C03, full
insert sequence
Length = 1773
Score = 307 bits (155), Expect = 3e-081
Identities = 242/271 (89%)
Strand = Plus / Plus
Query: 1 actttgatgcaaggcggaagcctcgtaatgttggaaaaatcattgcagccctggtcctca 60
|||| ||||| ||||||||||||| ||||||||| ||| | |||||||| ||||||||||
Sbjct: 360 acttcgatgctaggcggaagcctcataatgttgggaaagttattgcagctctggtcctca 419
Query: 61 caacactctgtatatttgctctgaagcaatctcctggttttggtggcaatagtgtgtttt 120
||||||| ||||||||| | ||||||||||||||||||||||||||| |||||||||||
Sbjct: 420 caacactatgtatatttattttgaagcaatctcctggttttggtggcagtagtgtgtttt 479
Query: 121 ctcgccatgaacctggtgttacccacgtcttagtaacaggaggagctggttatattggtt 180
|||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| |
Sbjct: 480 ctcgccatgaacctggtgttactcatgtcttagtaacaggaggagctggctatattgggt 539
Query: 181 cacatgccgctttaaggctcttacaggatagctatcgagttaccattgtggataatctat 240
||||||| | ||| | || ||| |||| | |||||||||||||||||||| ||||| |
Sbjct: 540 cacatgcttcattacgcctgttaaaggacaattatcgagttaccattgtggacaatcttt 599
Query: 241 ctagaggaaatatgggagcagtaaaggttct 271
|||||||||| ||||||||||||||||||||
Sbjct: 600 ctagaggaaacatgggagcagtaaaggttct 630
Score = 99.6 bits (50), Expect = 1e-018
Identities = 78/88 (88%)
Strand = Plus / Plus
Query: 436 gtcaacaagatatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngct 495
||||||||||| ||||| |||||||| ||||||||||| ||||||||||| |||| ||
Sbjct: 698 gtcaacaagatctttgccgaaaatgcgtttgatgctgttatgcactttgctgctgttgcc 757
Query: 496 tatgtgggagagagcacattggaacccc 523
|||||||| ||||| |||||||||||||
Sbjct: 758 tatgtgggtgagagtacattggaacccc 785
>dbj|AK099222.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091G23, full
insert sequence
Length = 1743
Score = 307 bits (155), Expect = 3e-081
Identities = 242/271 (89%)
Strand = Plus / Plus
Query: 1 actttgatgcaaggcggaagcctcgtaatgttggaaaaatcattgcagccctggtcctca 60
|||| ||||| ||||||||||||| ||||||||| ||| | |||||||| ||||||||||
Sbjct: 301 acttcgatgctaggcggaagcctcataatgttgggaaagttattgcagctctggtcctca 360
Query: 61 caacactctgtatatttgctctgaagcaatctcctggttttggtggcaatagtgtgtttt 120
||||||| ||||||||| | ||||||||||||||||||||||||||| |||||||||||
Sbjct: 361 caacactatgtatatttattttgaagcaatctcctggttttggtggcagtagtgtgtttt 420
Query: 121 ctcgccatgaacctggtgttacccacgtcttagtaacaggaggagctggttatattggtt 180
|||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| |
Sbjct: 421 ctcgccatgaacctggtgttactcatgtcttagtaacaggaggagctggctatattgggt 480
Query: 181 cacatgccgctttaaggctcttacaggatagctatcgagttaccattgtggataatctat 240
||||||| | ||| | || ||| |||| | |||||||||||||||||||| ||||| |
Sbjct: 481 cacatgcttcattacgcctgttaaaggacaattatcgagttaccattgtggacaatcttt 540
Query: 241 ctagaggaaatatgggagcagtaaaggttct 271
|||||||||| ||||||||||||||||||||
Sbjct: 541 ctagaggaaacatgggagcagtaaaggttct 571
Score = 99.6 bits (50), Expect = 1e-018
Identities = 78/88 (88%)
Strand = Plus / Plus
Query: 436 gtcaacaagatatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngct 495
||||||||||| ||||| |||||||| ||||||||||| ||||||||||| |||| ||
Sbjct: 639 gtcaacaagatctttgccgaaaatgcgtttgatgctgttatgcactttgctgctgttgcc 698
Query: 496 tatgtgggagagagcacattggaacccc 523
|||||||| ||||| |||||||||||||
Sbjct: 699 tatgtgggtgagagtacattggaacccc 726
>ref|XM_479925.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1743
Score = 307 bits (155), Expect = 3e-081
Identities = 242/271 (89%)
Strand = Plus / Plus
Query: 1 actttgatgcaaggcggaagcctcgtaatgttggaaaaatcattgcagccctggtcctca 60
|||| ||||| ||||||||||||| ||||||||| ||| | |||||||| ||||||||||
Sbjct: 301 acttcgatgctaggcggaagcctcataatgttgggaaagttattgcagctctggtcctca 360
Query: 61 caacactctgtatatttgctctgaagcaatctcctggttttggtggcaatagtgtgtttt 120
||||||| ||||||||| | ||||||||||||||||||||||||||| |||||||||||
Sbjct: 361 caacactatgtatatttattttgaagcaatctcctggttttggtggcagtagtgtgtttt 420
Query: 121 ctcgccatgaacctggtgttacccacgtcttagtaacaggaggagctggttatattggtt 180
|||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| |
Sbjct: 421 ctcgccatgaacctggtgttactcatgtcttagtaacaggaggagctggctatattgggt 480
Query: 181 cacatgccgctttaaggctcttacaggatagctatcgagttaccattgtggataatctat 240
||||||| | ||| | || ||| |||| | |||||||||||||||||||| ||||| |
Sbjct: 481 cacatgcttcattacgcctgttaaaggacaattatcgagttaccattgtggacaatcttt 540
Query: 241 ctagaggaaatatgggagcagtaaaggttct 271
|||||||||| ||||||||||||||||||||
Sbjct: 541 ctagaggaaacatgggagcagtaaaggttct 571
Score = 99.6 bits (50), Expect = 1e-018
Identities = 78/88 (88%)
Strand = Plus / Plus
Query: 436 gtcaacaagatatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngct 495
||||||||||| ||||| |||||||| ||||||||||| ||||||||||| |||| ||
Sbjct: 639 gtcaacaagatctttgccgaaaatgcgtttgatgctgttatgcactttgctgctgttgcc 698
Query: 496 tatgtgggagagagcacattggaacccc 523
|||||||| ||||| |||||||||||||
Sbjct: 699 tatgtgggtgagagtacattggaacccc 726
>ref|XM_507116.1| PREDICTED Oryza sativa (japonica cultivar-group), P0582D05.120 mRNA
Length = 1773
Score = 307 bits (155), Expect = 3e-081
Identities = 242/271 (89%)
Strand = Plus / Plus
Query: 1 actttgatgcaaggcggaagcctcgtaatgttggaaaaatcattgcagccctggtcctca 60
|||| ||||| ||||||||||||| ||||||||| ||| | |||||||| ||||||||||
Sbjct: 360 acttcgatgctaggcggaagcctcataatgttgggaaagttattgcagctctggtcctca 419
Query: 61 caacactctgtatatttgctctgaagcaatctcctggttttggtggcaatagtgtgtttt 120
||||||| ||||||||| | ||||||||||||||||||||||||||| |||||||||||
Sbjct: 420 caacactatgtatatttattttgaagcaatctcctggttttggtggcagtagtgtgtttt 479
Query: 121 ctcgccatgaacctggtgttacccacgtcttagtaacaggaggagctggttatattggtt 180
|||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| |
Sbjct: 480 ctcgccatgaacctggtgttactcatgtcttagtaacaggaggagctggctatattgggt 539
Query: 181 cacatgccgctttaaggctcttacaggatagctatcgagttaccattgtggataatctat 240
||||||| | ||| | || ||| |||| | |||||||||||||||||||| ||||| |
Sbjct: 540 cacatgcttcattacgcctgttaaaggacaattatcgagttaccattgtggacaatcttt 599
Query: 241 ctagaggaaatatgggagcagtaaaggttct 271
|||||||||| ||||||||||||||||||||
Sbjct: 600 ctagaggaaacatgggagcagtaaaggttct 630
Score = 99.6 bits (50), Expect = 1e-018
Identities = 78/88 (88%)
Strand = Plus / Plus
Query: 436 gtcaacaagatatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngct 495
||||||||||| ||||| |||||||| ||||||||||| ||||||||||| |||| ||
Sbjct: 698 gtcaacaagatctttgccgaaaatgcgtttgatgctgttatgcactttgctgctgttgcc 757
Query: 496 tatgtgggagagagcacattggaacccc 523
|||||||| ||||| |||||||||||||
Sbjct: 758 tatgtgggtgagagtacattggaacccc 785
>dbj|AP003879.1| Oryza sativa (japonica cultivar-group) chromosome 8 clone OJ1123_A02,
*** SEQUENCING IN PROGRESS ***
Length = 119531
Score = 135 bits (68), Expect = 3e-029
Identities = 99/110 (90%)
Strand = Plus / Plus
Query: 414 ttttcacttaactgcctcccaggtcaacaagatatttgctgaaaatgcatttgatgctgt 473
|||||||||||||| |||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 47161 ttttcacttaactggctcccaggtcaacaagatctttgccgaaaatgcgtttgatgctgt 47220
Query: 474 gatgcactttgcagctgnngcttatgtgggagagagcacattggaacccc 523
||||||||||| |||| || |||||||| ||||| |||||||||||||
Sbjct: 47221 tatgcactttgctgctgttgcctatgtgggtgagagtacattggaacccc 47270
Score = 135 bits (68), Expect = 3e-029
Identities = 104/116 (89%)
Strand = Plus / Plus
Query: 1 actttgatgcaaggcggaagcctcgtaatgttggaaaaatcattgcagccctggtcctca 60
|||| ||||| ||||||||||||| ||||||||| ||| | |||||||| ||||||||||
Sbjct: 45772 acttcgatgctaggcggaagcctcataatgttgggaaagttattgcagctctggtcctca 45831
Query: 61 caacactctgtatatttgctctgaagcaatctcctggttttggtggcaatagtgtg 116
||||||| ||||||||| | ||||||||||||||||||||||||||| |||||||
Sbjct: 45832 caacactatgtatatttattttgaagcaatctcctggttttggtggcagtagtgtg 45887
Score = 119 bits (60), Expect = 2e-024
Identities = 102/116 (87%)
Strand = Plus / Plus
Query: 116 gttttctcgccatgaacctggtgttacccacgtcttagtaacaggaggagctggttatat 175
||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||
Sbjct: 46793 gttttctcgccatgaacctggtgttactcatgtcttagtaacaggaggagctggctatat 46852
Query: 176 tggttcacatgccgctttaaggctcttacaggatagctatcgagttaccattgtgg 231
||| |||||||| | ||| | || ||| |||| | |||||||||||||||||||
Sbjct: 46853 tgggtcacatgcttcattacgcctgttaaaggacaattatcgagttaccattgtgg 46908
Score = 69.9 bits (35), Expect = 1e-009
Identities = 95/115 (82%)
Strand = Plus / Plus
Query: 234 aatctatctagaggaaatatgggagcagtaaaggttctgcagggcttatttccgcagcct 293
||||| ||||||||||| |||||||||||||||||||| || | || || || |||||
Sbjct: 46994 aatctttctagaggaaacatgggagcagtaaaggttctccaagagttgttcccccagcca 47053
Query: 294 ggtagactacaattcatctttgctgatctgggggaccagaaatctgtatcctcat 348
|| ||||| || || |||| ||||||||| || || || ||| ||||||||||||
Sbjct: 47054 ggaagacttcagtttatctatgctgatcttggagatcaaaaaactgtatcctcat 47108
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0582D05
Length = 150483
Score = 135 bits (68), Expect = 3e-029
Identities = 99/110 (90%)
Strand = Plus / Plus
Query: 414 ttttcacttaactgcctcccaggtcaacaagatatttgctgaaaatgcatttgatgctgt 473
|||||||||||||| |||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 62997 ttttcacttaactggctcccaggtcaacaagatctttgccgaaaatgcgtttgatgctgt 63056
Query: 474 gatgcactttgcagctgnngcttatgtgggagagagcacattggaacccc 523
||||||||||| |||| || |||||||| ||||| |||||||||||||
Sbjct: 63057 tatgcactttgctgctgttgcctatgtgggtgagagtacattggaacccc 63106
Score = 135 bits (68), Expect = 3e-029
Identities = 104/116 (89%)
Strand = Plus / Plus
Query: 1 actttgatgcaaggcggaagcctcgtaatgttggaaaaatcattgcagccctggtcctca 60
|||| ||||| ||||||||||||| ||||||||| ||| | |||||||| ||||||||||
Sbjct: 61608 acttcgatgctaggcggaagcctcataatgttgggaaagttattgcagctctggtcctca 61667
Query: 61 caacactctgtatatttgctctgaagcaatctcctggttttggtggcaatagtgtg 116
||||||| ||||||||| | ||||||||||||||||||||||||||| |||||||
Sbjct: 61668 caacactatgtatatttattttgaagcaatctcctggttttggtggcagtagtgtg 61723
Score = 119 bits (60), Expect = 2e-024
Identities = 102/116 (87%)
Strand = Plus / Plus
Query: 116 gttttctcgccatgaacctggtgttacccacgtcttagtaacaggaggagctggttatat 175
||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||
Sbjct: 62629 gttttctcgccatgaacctggtgttactcatgtcttagtaacaggaggagctggctatat 62688
Query: 176 tggttcacatgccgctttaaggctcttacaggatagctatcgagttaccattgtgg 231
||| |||||||| | ||| | || ||| |||| | |||||||||||||||||||
Sbjct: 62689 tgggtcacatgcttcattacgcctgttaaaggacaattatcgagttaccattgtgg 62744
Score = 69.9 bits (35), Expect = 1e-009
Identities = 95/115 (82%)
Strand = Plus / Plus
Query: 234 aatctatctagaggaaatatgggagcagtaaaggttctgcagggcttatttccgcagcct 293
||||| ||||||||||| |||||||||||||||||||| || | || || || |||||
Sbjct: 62830 aatctttctagaggaaacatgggagcagtaaaggttctccaagagttgttcccccagcca 62889
Query: 294 ggtagactacaattcatctttgctgatctgggggaccagaaatctgtatcctcat 348
|| ||||| || || |||| ||||||||| || || || ||| ||||||||||||
Sbjct: 62890 ggaagacttcagtttatctatgctgatcttggagatcaaaaaactgtatcctcat 62944
>gb|AACV01017191.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017191, whole
genome shotgun sequence
Length = 51787
Score = 135 bits (68), Expect = 3e-029
Identities = 104/116 (89%)
Strand = Plus / Minus
Query: 1 actttgatgcaaggcggaagcctcgtaatgttggaaaaatcattgcagccctggtcctca 60
|||| ||||| ||||||||||||| ||||||||| ||| | |||||||| ||||||||||
Sbjct: 28522 acttcgatgctaggcggaagcctcataatgttgggaaagttattgcagctctggtcctca 28463
Query: 61 caacactctgtatatttgctctgaagcaatctcctggttttggtggcaatagtgtg 116
||||||| ||||||||| | ||||||||||||||||||||||||||| |||||||
Sbjct: 28462 caacactatgtatatttattttgaagcaatctcctggttttggtggcagtagtgtg 28407
Score = 135 bits (68), Expect = 3e-029
Identities = 99/110 (90%)
Strand = Plus / Minus
Query: 414 ttttcacttaactgcctcccaggtcaacaagatatttgctgaaaatgcatttgatgctgt 473
|||||||||||||| |||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 27133 ttttcacttaactggctcccaggtcaacaagatctttgccgaaaatgcgtttgatgctgt 27074
Query: 474 gatgcactttgcagctgnngcttatgtgggagagagcacattggaacccc 523
||||||||||| |||| || |||||||| ||||| |||||||||||||
Sbjct: 27073 tatgcactttgctgctgttgcctatgtgggtgagagtacattggaacccc 27024
Score = 119 bits (60), Expect = 2e-024
Identities = 102/116 (87%)
Strand = Plus / Minus
Query: 116 gttttctcgccatgaacctggtgttacccacgtcttagtaacaggaggagctggttatat 175
||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||
Sbjct: 27501 gttttctcgccatgaacctggtgttactcatgtcttagtaacaggaggagctggctatat 27442
Query: 176 tggttcacatgccgctttaaggctcttacaggatagctatcgagttaccattgtgg 231
||| |||||||| | ||| | || ||| |||| | |||||||||||||||||||
Sbjct: 27441 tgggtcacatgcttcattacgcctgttaaaggacaattatcgagttaccattgtgg 27386
Score = 69.9 bits (35), Expect = 1e-009
Identities = 95/115 (82%)
Strand = Plus / Minus
Query: 234 aatctatctagaggaaatatgggagcagtaaaggttctgcagggcttatttccgcagcct 293
||||| ||||||||||| |||||||||||||||||||| || | || || || |||||
Sbjct: 27300 aatctttctagaggaaacatgggagcagtaaaggttctccaagagttgttcccccagcca 27241
Query: 294 ggtagactacaattcatctttgctgatctgggggaccagaaatctgtatcctcat 348
|| ||||| || || |||| ||||||||| || || || ||| ||||||||||||
Sbjct: 27240 ggaagacttcagtttatctatgctgatcttggagatcaaaaaactgtatcctcat 27186
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 135 bits (68), Expect = 3e-029
Identities = 99/110 (90%)
Strand = Plus / Plus
Query: 414 ttttcacttaactgcctcccaggtcaacaagatatttgctgaaaatgcatttgatgctgt 473
|||||||||||||| |||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 1431023 ttttcacttaactggctcccaggtcaacaagatctttgccgaaaatgcgtttgatgctgt 1431082
Query: 474 gatgcactttgcagctgnngcttatgtgggagagagcacattggaacccc 523
||||||||||| |||| || |||||||| ||||| |||||||||||||
Sbjct: 1431083 tatgcactttgctgctgttgcctatgtgggtgagagtacattggaacccc 1431132
Score = 135 bits (68), Expect = 3e-029
Identities = 104/116 (89%)
Strand = Plus / Plus
Query: 1 actttgatgcaaggcggaagcctcgtaatgttggaaaaatcattgcagccctggtcctca 60
|||| ||||| ||||||||||||| ||||||||| ||| | |||||||| ||||||||||
Sbjct: 1429634 acttcgatgctaggcggaagcctcataatgttgggaaagttattgcagctctggtcctca 1429693
Query: 61 caacactctgtatatttgctctgaagcaatctcctggttttggtggcaatagtgtg 116
||||||| ||||||||| | ||||||||||||||||||||||||||| |||||||
Sbjct: 1429694 caacactatgtatatttattttgaagcaatctcctggttttggtggcagtagtgtg 1429749
Score = 119 bits (60), Expect = 2e-024
Identities = 102/116 (87%)
Strand = Plus / Plus
Query: 116 gttttctcgccatgaacctggtgttacccacgtcttagtaacaggaggagctggttatat 175
||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||
Sbjct: 1430655 gttttctcgccatgaacctggtgttactcatgtcttagtaacaggaggagctggctatat 1430714
Query: 176 tggttcacatgccgctttaaggctcttacaggatagctatcgagttaccattgtgg 231
||| |||||||| | ||| | || ||| |||| | |||||||||||||||||||
Sbjct: 1430715 tgggtcacatgcttcattacgcctgttaaaggacaattatcgagttaccattgtgg 1430770
Score = 69.9 bits (35), Expect = 1e-009
Identities = 95/115 (82%)
Strand = Plus / Plus
Query: 234 aatctatctagaggaaatatgggagcagtaaaggttctgcagggcttatttccgcagcct 293
||||| ||||||||||| |||||||||||||||||||| || | || || || |||||
Sbjct: 1430856 aatctttctagaggaaacatgggagcagtaaaggttctccaagagttgttcccccagcca 1430915
Query: 294 ggtagactacaattcatctttgctgatctgggggaccagaaatctgtatcctcat 348
|| ||||| || || |||| ||||||||| || || || ||| ||||||||||||
Sbjct: 1430916 ggaagacttcagtttatctatgctgatcttggagatcaaaaaactgtatcctcat 1430970
>gb|CH401228.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000065 genomic
scaffold, whole genome shotgun sequence
Length = 5026603
Score = 135 bits (68), Expect = 3e-029
Identities = 99/110 (90%)
Strand = Plus / Plus
Query: 414 ttttcacttaactgcctcccaggtcaacaagatatttgctgaaaatgcatttgatgctgt 473
|||||||||||||| |||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 1637741 ttttcacttaactggctcccaggtcaacaagatctttgccgaaaatgcgtttgatgctgt 1637800
Query: 474 gatgcactttgcagctgnngcttatgtgggagagagcacattggaacccc 523
||||||||||| |||| || |||||||| ||||| |||||||||||||
Sbjct: 1637801 tatgcactttgctgctgttgcctatgtgggtgagagtacattggaacccc 1637850
Score = 135 bits (68), Expect = 3e-029
Identities = 104/116 (89%)
Strand = Plus / Plus
Query: 1 actttgatgcaaggcggaagcctcgtaatgttggaaaaatcattgcagccctggtcctca 60
|||| ||||| ||||||||||||| ||||||||| ||| | |||||||| ||||||||||
Sbjct: 1636352 acttcgatgctaggcggaagcctcataatgttgggaaagttattgcagctctggtcctca 1636411
Query: 61 caacactctgtatatttgctctgaagcaatctcctggttttggtggcaatagtgtg 116
||||||| ||||||||| | ||||||||||||||||||||||||||| |||||||
Sbjct: 1636412 caacactatgtatatttattttgaagcaatctcctggttttggtggcagtagtgtg 1636467
Score = 119 bits (60), Expect = 2e-024
Identities = 102/116 (87%)
Strand = Plus / Plus
Query: 116 gttttctcgccatgaacctggtgttacccacgtcttagtaacaggaggagctggttatat 175
||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||
Sbjct: 1637373 gttttctcgccatgaacctggtgttactcatgtcttagtaacaggaggagctggctatat 1637432
Query: 176 tggttcacatgccgctttaaggctcttacaggatagctatcgagttaccattgtgg 231
||| |||||||| | ||| | || ||| |||| | |||||||||||||||||||
Sbjct: 1637433 tgggtcacatgcttcattacgcctgttaaaggacaattatcgagttaccattgtgg 1637488
Score = 69.9 bits (35), Expect = 1e-009
Identities = 95/115 (82%)
Strand = Plus / Plus
Query: 234 aatctatctagaggaaatatgggagcagtaaaggttctgcagggcttatttccgcagcct 293
||||| ||||||||||| |||||||||||||||||||| || | || || || |||||
Sbjct: 1637574 aatctttctagaggaaacatgggagcagtaaaggttctccaagagttgttcccccagcca 1637633
Query: 294 ggtagactacaattcatctttgctgatctgggggaccagaaatctgtatcctcat 348
|| ||||| || || |||| ||||||||| || || || ||| ||||||||||||
Sbjct: 1637634 ggaagacttcagtttatctatgctgatcttggagatcaaaaaactgtatcctcat 1637688
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 135 bits (68), Expect = 3e-029
Identities = 99/110 (90%)
Strand = Plus / Plus
Query: 414 ttttcacttaactgcctcccaggtcaacaagatatttgctgaaaatgcatttgatgctgt 473
|||||||||||||| |||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 1637741 ttttcacttaactggctcccaggtcaacaagatctttgccgaaaatgcgtttgatgctgt 1637800
Query: 474 gatgcactttgcagctgnngcttatgtgggagagagcacattggaacccc 523
||||||||||| |||| || |||||||| ||||| |||||||||||||
Sbjct: 1637801 tatgcactttgctgctgttgcctatgtgggtgagagtacattggaacccc 1637850
Score = 135 bits (68), Expect = 3e-029
Identities = 104/116 (89%)
Strand = Plus / Plus
Query: 1 actttgatgcaaggcggaagcctcgtaatgttggaaaaatcattgcagccctggtcctca 60
|||| ||||| ||||||||||||| ||||||||| ||| | |||||||| ||||||||||
Sbjct: 1636352 acttcgatgctaggcggaagcctcataatgttgggaaagttattgcagctctggtcctca 1636411
Query: 61 caacactctgtatatttgctctgaagcaatctcctggttttggtggcaatagtgtg 116
||||||| ||||||||| | ||||||||||||||||||||||||||| |||||||
Sbjct: 1636412 caacactatgtatatttattttgaagcaatctcctggttttggtggcagtagtgtg 1636467
Score = 119 bits (60), Expect = 2e-024
Identities = 102/116 (87%)
Strand = Plus / Plus
Query: 116 gttttctcgccatgaacctggtgttacccacgtcttagtaacaggaggagctggttatat 175
||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||
Sbjct: 1637373 gttttctcgccatgaacctggtgttactcatgtcttagtaacaggaggagctggctatat 1637432
Query: 176 tggttcacatgccgctttaaggctcttacaggatagctatcgagttaccattgtgg 231
||| |||||||| | ||| | || ||| |||| | |||||||||||||||||||
Sbjct: 1637433 tgggtcacatgcttcattacgcctgttaaaggacaattatcgagttaccattgtgg 1637488
Score = 69.9 bits (35), Expect = 1e-009
Identities = 95/115 (82%)
Strand = Plus / Plus
Query: 234 aatctatctagaggaaatatgggagcagtaaaggttctgcagggcttatttccgcagcct 293
||||| ||||||||||| |||||||||||||||||||| || | || || || |||||
Sbjct: 1637574 aatctttctagaggaaacatgggagcagtaaaggttctccaagagttgttcccccagcca 1637633
Query: 294 ggtagactacaattcatctttgctgatctgggggaccagaaatctgtatcctcat 348
|| ||||| || || |||| ||||||||| || || || ||| ||||||||||||
Sbjct: 1637634 ggaagacttcagtttatctatgctgatcttggagatcaaaaaactgtatcctcat 1637688
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 135 bits (68), Expect = 3e-029
Identities = 99/110 (90%)
Strand = Plus / Plus
Query: 414 ttttcacttaactgcctcccaggtcaacaagatatttgctgaaaatgcatttgatgctgt 473
|||||||||||||| |||||||||||||||||| ||||| |||||||| |||||||||||
Sbjct: 1663497 ttttcacttaactggctcccaggtcaacaagatctttgccgaaaatgcgtttgatgctgt 1663556
Query: 474 gatgcactttgcagctgnngcttatgtgggagagagcacattggaacccc 523
||||||||||| |||| || |||||||| ||||| |||||||||||||
Sbjct: 1663557 tatgcactttgctgctgttgcctatgtgggtgagagtacattggaacccc 1663606
Score = 135 bits (68), Expect = 3e-029
Identities = 104/116 (89%)
Strand = Plus / Plus
Query: 1 actttgatgcaaggcggaagcctcgtaatgttggaaaaatcattgcagccctggtcctca 60
|||| ||||| ||||||||||||| ||||||||| ||| | |||||||| ||||||||||
Sbjct: 1662108 acttcgatgctaggcggaagcctcataatgttgggaaagttattgcagctctggtcctca 1662167
Query: 61 caacactctgtatatttgctctgaagcaatctcctggttttggtggcaatagtgtg 116
||||||| ||||||||| | ||||||||||||||||||||||||||| |||||||
Sbjct: 1662168 caacactatgtatatttattttgaagcaatctcctggttttggtggcagtagtgtg 1662223
Score = 119 bits (60), Expect = 2e-024
Identities = 102/116 (87%)
Strand = Plus / Plus
Query: 116 gttttctcgccatgaacctggtgttacccacgtcttagtaacaggaggagctggttatat 175
||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||
Sbjct: 1663129 gttttctcgccatgaacctggtgttactcatgtcttagtaacaggaggagctggctatat 1663188
Query: 176 tggttcacatgccgctttaaggctcttacaggatagctatcgagttaccattgtgg 231
||| |||||||| | ||| | || ||| |||| | |||||||||||||||||||
Sbjct: 1663189 tgggtcacatgcttcattacgcctgttaaaggacaattatcgagttaccattgtgg 1663244
Score = 69.9 bits (35), Expect = 1e-009
Identities = 95/115 (82%)
Strand = Plus / Plus
Query: 234 aatctatctagaggaaatatgggagcagtaaaggttctgcagggcttatttccgcagcct 293
||||| ||||||||||| |||||||||||||||||||| || | || || || |||||
Sbjct: 1663330 aatctttctagaggaaacatgggagcagtaaaggttctccaagagttgttcccccagcca 1663389
Query: 294 ggtagactacaattcatctttgctgatctgggggaccagaaatctgtatcctcat 348
|| ||||| || || |||| ||||||||| || || || ||| ||||||||||||
Sbjct: 1663390 ggaagacttcagtttatctatgctgatcttggagatcaaaaaactgtatcctcat 1663444
>gb|D41876.1|D41876 RICS4842A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 225
Score = 77.8 bits (39), Expect = 5e-012
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgtggga 504
|||||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 25 atatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggt 84
Query: 505 gagagcaca 513
|||||||||
Sbjct: 85 gagagcaca 93
>gb|CB644395.1|CB644395 OSJNEb05J11.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb05J11 5', mRNA sequence
Length = 835
Score = 77.8 bits (39), Expect = 5e-012
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgtggga 504
|||||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 673 atatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggt 732
Query: 505 gagagcaca 513
|||||||||
Sbjct: 733 gagagcaca 741
Score = 54.0 bits (27), Expect = 8e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 217 gagttaccattgtggataatctatctagaggaaatatgggagcagtaaaggttct 271
|||| ||||| ||||||||||| || |||||||||||||| ||| | ||||||||
Sbjct: 542 gagtcaccatagtggataatctttcaagaggaaatatgggggcaatcaaggttct 596
>gb|CB644459.1|CB644459 OSJNEb05K24.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb05K24 5', mRNA sequence
Length = 836
Score = 77.8 bits (39), Expect = 5e-012
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgtggga 504
|||||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 673 atatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggt 732
Query: 505 gagagcaca 513
|||||||||
Sbjct: 733 gagagcaca 741
Score = 54.0 bits (27), Expect = 8e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 217 gagttaccattgtggataatctatctagaggaaatatgggagcagtaaaggttct 271
|||| ||||| ||||||||||| || |||||||||||||| ||| | ||||||||
Sbjct: 542 gagtcaccatagtggataatctttcaagaggaaatatgggggcaatcaaggttct 596
>gb|CB647320.1|CB647320 OSJNEb10D06.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb10D06 5', mRNA sequence
Length = 851
Score = 77.8 bits (39), Expect = 5e-012
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgtggga 504
|||||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 680 atatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggt 739
Query: 505 gagagcaca 513
|||||||||
Sbjct: 740 gagagcaca 748
Score = 54.0 bits (27), Expect = 8e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 217 gagttaccattgtggataatctatctagaggaaatatgggagcagtaaaggttct 271
|||| ||||| ||||||||||| || |||||||||||||| ||| | ||||||||
Sbjct: 549 gagtcaccatagtggataatctttcaagaggaaatatgggggcaatcaaggttct 603
>gb|CB663075.1|CB663075 OSJNEd07K12.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd07K12 5', mRNA sequence
Length = 776
Score = 77.8 bits (39), Expect = 5e-012
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgtggga 504
|||||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 180 atatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggt 239
Query: 505 gagagcaca 513
|||||||||
Sbjct: 240 gagagcaca 248
>gb|CB664607.1|CB664607 OSJNEd10G21.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd10G21 5', mRNA sequence
Length = 800
Score = 77.8 bits (39), Expect = 5e-012
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgtggga 504
|||||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 653 atatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggt 712
Query: 505 gagagcaca 513
|||||||||
Sbjct: 713 gagagcaca 721
Score = 54.0 bits (27), Expect = 8e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 217 gagttaccattgtggataatctatctagaggaaatatgggagcagtaaaggttct 271
|||| ||||| ||||||||||| || |||||||||||||| ||| | ||||||||
Sbjct: 522 gagtcaccatagtggataatctttcaagaggaaatatgggggcaatcaaggttct 576
>emb|AL607094.1|OSJN01001 Oryza sativa (japonica cultivar-group) chromosome 7 clone
OSJNBa0017I17, *** SEQUENCING IN PROGRESS ***
Length = 141902
Score = 77.8 bits (39), Expect = 5e-012
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgtggga 504
|||||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 1141 atatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggt 1082
Query: 505 gagagcaca 513
|||||||||
Sbjct: 1081 gagagcaca 1073
Score = 44.1 bits (22), Expect = 0.074
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 230 ggataatctatctagaggaaatatgggagcagtaaaggttct 271
||||||||| || |||||||||||||| ||| | ||||||||
Sbjct: 1388 ggataatctttcaagaggaaatatgggggcaatcaaggttct 1347
>emb|AL607095.1|OSJN01003 Oryza sativa (japonica cultivar-group) chromosome 7 clone OSJNBa0087K02,
*** SEQUENCING IN PROGRESS ***
Length = 164324
Score = 77.8 bits (39), Expect = 5e-012
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgtggga 504
|||||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 152784 atatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggt 152725
Query: 505 gagagcaca 513
|||||||||
Sbjct: 152724 gagagcaca 152716
Score = 44.1 bits (22), Expect = 0.074
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 230 ggataatctatctagaggaaatatgggagcagtaaaggttct 271
||||||||| || |||||||||||||| ||| | ||||||||
Sbjct: 153031 ggataatctttcaagaggaaatatgggggcaatcaaggttct 152990
>dbj|AB096864.1| Oryza sativa (japonica cultivar-group) OsUEL-1 mRNA for
UDP-galactose 4-epimerase-like protein, complete cds
Length = 1516
Score = 77.8 bits (39), Expect = 5e-012
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgtggga 504
|||||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 518 atatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggt 577
Query: 505 gagagcaca 513
|||||||||
Sbjct: 578 gagagcaca 586
Score = 54.0 bits (27), Expect = 8e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 217 gagttaccattgtggataatctatctagaggaaatatgggagcagtaaaggttct 271
|||| ||||| ||||||||||| || |||||||||||||| ||| | ||||||||
Sbjct: 387 gagtcaccatagtggataatctttcaagaggaaatatgggggcaatcaaggttct 441
>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1417_E01
Length = 118058
Score = 77.8 bits (39), Expect = 5e-012
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgtggga 504
|||||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 69716 atatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggt 69775
Query: 505 gagagcaca 513
|||||||||
Sbjct: 69776 gagagcaca 69784
Score = 44.1 bits (22), Expect = 0.074
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 230 ggataatctatctagaggaaatatgggagcagtaaaggttct 271
||||||||| || |||||||||||||| ||| | ||||||||
Sbjct: 69469 ggataatctttcaagaggaaatatgggggcaatcaaggttct 69510
>dbj|AK059685.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-A06, full
insert sequence
Length = 1177
Score = 77.8 bits (39), Expect = 5e-012
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgtggga 504
|||||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 100 atatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggt 159
Query: 505 gagagcaca 513
|||||||||
Sbjct: 160 gagagcaca 168
>dbj|AK065558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033B01, full
insert sequence
Length = 1822
Score = 77.8 bits (39), Expect = 5e-012
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgtggga 504
|||||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 721 atatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggt 780
Query: 505 gagagcaca 513
|||||||||
Sbjct: 781 gagagcaca 789
Score = 54.0 bits (27), Expect = 8e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 217 gagttaccattgtggataatctatctagaggaaatatgggagcagtaaaggttct 271
|||| ||||| ||||||||||| || |||||||||||||| ||| | ||||||||
Sbjct: 590 gagtcaccatagtggataatctttcaagaggaaatatgggggcaatcaaggttct 644
>dbj|AK099140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023053D14, full
insert sequence
Length = 1765
Score = 77.8 bits (39), Expect = 5e-012
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgtggga 504
|||||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 696 atatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggt 755
Query: 505 gagagcaca 513
|||||||||
Sbjct: 756 gagagcaca 764
Score = 54.0 bits (27), Expect = 8e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 217 gagttaccattgtggataatctatctagaggaaatatgggagcagtaaaggttct 271
|||| ||||| ||||||||||| || |||||||||||||| ||| | ||||||||
Sbjct: 565 gagtcaccatagtggataatctttcaagaggaaatatgggggcaatcaaggttct 619
>dbj|AK099183.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099C15, full
insert sequence
Length = 1761
Score = 77.8 bits (39), Expect = 5e-012
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgtggga 504
|||||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 686 atatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggt 745
Query: 505 gagagcaca 513
|||||||||
Sbjct: 746 gagagcaca 754
Score = 46.1 bits (23), Expect = 0.019
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 217 gagttaccattgtggataatctatctagaggaaatatgggagcagtaaaggttct 271
|||| ||||| || |||||||| || |||||||||||||| ||| | ||||||||
Sbjct: 555 gagtcaccatagtagataatctttcaagaggaaatatgggggcaatcaaggttct 609
>dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0495H05
Length = 205595
Score = 77.8 bits (39), Expect = 5e-012
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgtggga 504
|||||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 198220 atatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggt 198279
Query: 505 gagagcaca 513
|||||||||
Sbjct: 198280 gagagcaca 198288
Score = 44.1 bits (22), Expect = 0.074
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 230 ggataatctatctagaggaaatatgggagcagtaaaggttct 271
||||||||| || |||||||||||||| ||| | ||||||||
Sbjct: 197973 ggataatctttcaagaggaaatatgggggcaatcaaggttct 198014
>gb|AACV01015146.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015146, whole
genome shotgun sequence
Length = 19731
Score = 77.8 bits (39), Expect = 5e-012
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgtggga 504
|||||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 7332 atatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggt 7391
Query: 505 gagagcaca 513
|||||||||
Sbjct: 7392 gagagcaca 7400
Score = 44.1 bits (22), Expect = 0.074
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 230 ggataatctatctagaggaaatatgggagcagtaaaggttct 271
||||||||| || |||||||||||||| ||| | ||||||||
Sbjct: 7085 ggataatctttcaagaggaaatatgggggcaatcaaggttct 7126
>ref|XM_476598.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1761
Score = 77.8 bits (39), Expect = 5e-012
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgtggga 504
|||||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 686 atatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggt 745
Query: 505 gagagcaca 513
|||||||||
Sbjct: 746 gagagcaca 754
Score = 54.0 bits (27), Expect = 8e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 217 gagttaccattgtggataatctatctagaggaaatatgggagcagtaaaggttct 271
|||| ||||| ||||||||||| || |||||||||||||| ||| | ||||||||
Sbjct: 555 gagtcaccatagtggataatctttcaagaggaaatatgggggcaatcaaggttct 609
>ref|XM_506159.2| PREDICTED Oryza sativa (japonica cultivar-group), P0495H05.61 mRNA
Length = 1824
Score = 77.8 bits (39), Expect = 5e-012
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgtggga 504
|||||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 723 atatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggt 782
Query: 505 gagagcaca 513
|||||||||
Sbjct: 783 gagagcaca 791
Score = 54.0 bits (27), Expect = 8e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 217 gagttaccattgtggataatctatctagaggaaatatgggagcagtaaaggttct 271
|||| ||||| ||||||||||| || |||||||||||||| ||| | ||||||||
Sbjct: 592 gagtcaccatagtggataatctttcaagaggaaatatgggggcaatcaaggttct 646
>ref|XM_507350.1| PREDICTED Oryza sativa (japonica cultivar-group), P0495H05.61 mRNA
Length = 1765
Score = 77.8 bits (39), Expect = 5e-012
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgtggga 504
|||||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 697 atatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggt 756
Query: 505 gagagcaca 513
|||||||||
Sbjct: 757 gagagcaca 765
Score = 54.0 bits (27), Expect = 8e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 217 gagttaccattgtggataatctatctagaggaaatatgggagcagtaaaggttct 271
|||| ||||| ||||||||||| || |||||||||||||| ||| | ||||||||
Sbjct: 566 gagtcaccatagtggataatctttcaagaggaaatatgggggcaatcaaggttct 620
>ref|NT_079879.2| Oryza sativa (japonica cultivar-group)
Length = 11570172
Score = 77.8 bits (39), Expect = 5e-012
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgtggga 504
|||||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 2069995 atatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggt 2070054
Query: 505 gagagcaca 513
|||||||||
Sbjct: 2070055 gagagcaca 2070063
Score = 44.1 bits (22), Expect = 0.074
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 230 ggataatctatctagaggaaatatgggagcagtaaaggttct 271
||||||||| || |||||||||||||| ||| | ||||||||
Sbjct: 2069748 ggataatctttcaagaggaaatatgggggcaatcaaggttct 2069789
>gb|CH401219.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000056
genomic scaffold, whole genome shotgun sequence
Length = 1384745
Score = 77.8 bits (39), Expect = 5e-012
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgtggga 504
|||||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 628857 atatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggt 628916
Query: 505 gagagcaca 513
|||||||||
Sbjct: 628917 gagagcaca 628925
Score = 44.1 bits (22), Expect = 0.074
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 230 ggataatctatctagaggaaatatgggagcagtaaaggttct 271
||||||||| || |||||||||||||| ||| | ||||||||
Sbjct: 628610 ggataatctttcaagaggaaatatgggggcaatcaaggttct 628651
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 77.8 bits (39), Expect = 5e-012
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgtggga 504
|||||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 2060761 atatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggt 2060820
Query: 505 gagagcaca 513
|||||||||
Sbjct: 2060821 gagagcaca 2060829
Score = 44.1 bits (22), Expect = 0.074
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 230 ggataatctatctagaggaaatatgggagcagtaaaggttct 271
||||||||| || |||||||||||||| ||| | ||||||||
Sbjct: 2060514 ggataatctttcaagaggaaatatgggggcaatcaaggttct 2060555
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 77.8 bits (39), Expect = 5e-012
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgtggga 504
|||||||| |||||||| ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 2113923 atatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggt 2113982
Query: 505 gagagcaca 513
|||||||||
Sbjct: 2113983 gagagcaca 2113991
Score = 44.1 bits (22), Expect = 0.074
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 230 ggataatctatctagaggaaatatgggagcagtaaaggttct 271
||||||||| || |||||||||||||| ||| | ||||||||
Sbjct: 2113676 ggataatctttcaagaggaaatatgggggcaatcaaggttct 2113717
>gb|CB651858.1|CB651858 OSJNEb16P24.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16P24 5', mRNA sequence
Length = 767
Score = 69.9 bits (35), Expect = 1e-009
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgtggga 504
|||||||| ||||||| ||||||||||| ||||||||||| |||| |||||||| ||
Sbjct: 673 atatttgcacaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgttggt 732
Query: 505 gagagcaca 513
|||||||||
Sbjct: 733 gagagcaca 741
Score = 52.0 bits (26), Expect = 3e-004
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 222 accattgtggataatctatctagaggaaatatgggagcagtaaaggttct 271
||||| ||||||||||| || |||||||||||||| ||| | ||||||||
Sbjct: 547 accatagtggataatctttcaagaggaaatatgggggcaatcaaggttct 596
>gb|CB665595.1|CB665595 OSJNEd12B20.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd12B20 5', mRNA sequence
Length = 760
Score = 67.9 bits (34), Expect = 5e-009
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 445 atatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttatgt 500
|||||||| |||||||| ||||||||||| ||||||||||| |||| ||||||||
Sbjct: 700 atatttgcagaaaatgcttttgatgctgtcatgcactttgctgctgtcgcttatgt 755
Score = 54.0 bits (27), Expect = 8e-005
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 217 gagttaccattgtggataatctatctagaggaaatatgggagcagtaaaggttct 271
|||| ||||| ||||||||||| || |||||||||||||| ||| | ||||||||
Sbjct: 569 gagtcaccatagtggataatctttcaagaggaaatatgggggcaatcaaggttct 623
>gb|AACV01010487.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010487, whole
genome shotgun sequence
Length = 50489
Score = 65.9 bits (33), Expect = 2e-008
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 432 ccaggtcaacaagatatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgn 491
|||||| ||||| |||||| | ||||||||||| |||||||| ||||||||||| || |
Sbjct: 30119 ccaggttaacaaaatattttcagaaaatgcattcgatgctgttatgcactttgctgccgt 30060
Query: 492 ngcttatgtgggagagagcacattgga 518
||||| || || |||||||| |||||
Sbjct: 30059 tgcttacgttggtgagagcacgttgga 30033
>ref|NT_107200.1| Oryza sativa (japonica cultivar-group)
Length = 1324591
Score = 65.9 bits (33), Expect = 2e-008
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 432 ccaggtcaacaagatatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgn 491
|||||| ||||| |||||| | ||||||||||| |||||||| ||||||||||| || |
Sbjct: 260663 ccaggttaacaaaatattttcagaaaatgcattcgatgctgttatgcactttgctgccgt 260722
Query: 492 ngcttatgtgggagagagcacattgga 518
||||| || || |||||||| |||||
Sbjct: 260723 tgcttacgttggtgagagcacgttgga 260749
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 65.9 bits (33), Expect = 2e-008
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 432 ccaggtcaacaagatatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgn 491
|||||| ||||| |||||| | ||||||||||| |||||||| ||||||||||| || |
Sbjct: 9170933 ccaggttaacaaaatattttcagaaaatgcattcgatgctgttatgcactttgctgccgt 9170992
Query: 492 ngcttatgtgggagagagcacattgga 518
||||| || || |||||||| |||||
Sbjct: 9170993 tgcttacgttggtgagagcacgttgga 9171019
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 65.9 bits (33), Expect = 2e-008
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 432 ccaggtcaacaagatatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgn 491
|||||| ||||| |||||| | ||||||||||| |||||||| ||||||||||| || |
Sbjct: 28315032 ccaggttaacaaaatattttcagaaaatgcattcgatgctgttatgcactttgctgccgt 28315091
Query: 492 ngcttatgtgggagagagcacattgga 518
||||| || || |||||||| |||||
Sbjct: 28315092 tgcttacgttggtgagagcacgttgga 28315118
>emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23,
complete sequence
Length = 164805
Score = 65.9 bits (33), Expect = 2e-008
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 432 ccaggtcaacaagatatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgn 491
|||||| ||||| |||||| | ||||||||||| |||||||| ||||||||||| || |
Sbjct: 16742 ccaggttaacaaaatattttcagaaaatgcattcgatgctgttatgcactttgctgccgt 16801
Query: 492 ngcttatgtgggagagagcacattgga 518
||||| || || |||||||| |||||
Sbjct: 16802 tgcttacgttggtgagagcacgttgga 16828
>emb|AL606648.3|OSJN00093 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0093O08,
complete sequence
Length = 148860
Score = 65.9 bits (33), Expect = 2e-008
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 432 ccaggtcaacaagatatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgn 491
|||||| ||||| |||||| | ||||||||||| |||||||| ||||||||||| || |
Sbjct: 135867 ccaggttaacaaaatattttcagaaaatgcattcgatgctgttatgcactttgctgccgt 135926
Query: 492 ngcttatgtgggagagagcacattgga 518
||||| || || |||||||| |||||
Sbjct: 135927 tgcttacgttggtgagagcacgttgga 135953
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 65.9 bits (33), Expect = 2e-008
Identities = 73/87 (83%)
Strand = Plus / Plus
Query: 432 ccaggtcaacaagatatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgn 491
|||||| ||||| |||||| | ||||||||||| |||||||| ||||||||||| || |
Sbjct: 31439059 ccaggttaacaaaatattttcagaaaatgcattcgatgctgttatgcactttgctgccgt 31439118
Query: 492 ngcttatgtgggagagagcacattgga 518
||||| || || |||||||| |||||
Sbjct: 31439119 tgcttacgttggtgagagcacgttgga 31439145
>gb|CB651700.1|CB651700 OSJNEb16M10.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16M10 5', mRNA sequence
Length = 782
Score = 60.0 bits (30), Expect = 1e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 439 aacaagatatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttat 498
||||| |||||| | ||||||||||| |||||||| ||||||||||| || | |||||
Sbjct: 614 aacaaaatattttcagaaaatgcattcgatgctgttatgcactttgctgccgttgcttac 673
Query: 499 gtgggagagagcacattgga 518
|| || |||||||| |||||
Sbjct: 674 gttggtgagagcacgttgga 693
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 216 cgagttaccattgtggataatctatctagaggaaatatgggagc 259
|||||||||||||||||||| || |||||||| || ||||||||
Sbjct: 488 cgagttaccattgtggataacctttctagagggaacatgggagc 531
Score = 50.1 bits (25), Expect = 0.001
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 111 agtgtgttttctcgccatgaacctggtgttacccacgtcttagtaacaggaggagctggt 170
|||||||| |||||||||||| |||||| || || || || || || |||||||||||
Sbjct: 383 agtgtgttctctcgccatgaaattggtgtgactcatgtgttggtgactggaggagctgga 442
Query: 171 tatattggttcacatgc 187
|| ||||| ||||||||
Sbjct: 443 tacattgggtcacatgc 459
>gb|CB662313.1|CB662313 OSJNEd06D10.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd06D10 5', mRNA sequence
Length = 813
Score = 60.0 bits (30), Expect = 1e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 439 aacaagatatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttat 498
||||| |||||| | ||||||||||| |||||||| ||||||||||| || | |||||
Sbjct: 597 aacaaaatattttcagaaaatgcattcgatgctgttatgcactttgctgccgttgcttac 656
Query: 499 gtgggagagagcacattgga 518
|| || |||||||| |||||
Sbjct: 657 gttggtgagagcacgttgga 676
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 216 cgagttaccattgtggataatctatctagaggaaatatgggagc 259
|||||||||||||||||||| || |||||||| || ||||||||
Sbjct: 471 cgagttaccattgtggataacctttctagagggaacatgggagc 514
Score = 50.1 bits (25), Expect = 0.001
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 111 agtgtgttttctcgccatgaacctggtgttacccacgtcttagtaacaggaggagctggt 170
|||||||| |||||||||||| |||||| || || || || || || |||||||||||
Sbjct: 366 agtgtgttctctcgccatgaaattggtgtgactcatgtgttggtgactggaggagctgga 425
Query: 171 tatattggttcacatgc 187
|| ||||| ||||||||
Sbjct: 426 tacattgggtcacatgc 442
>gb|CB662314.1|CB662314 OSJNEd06D10.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd06D10 3', mRNA sequence
Length = 816
Score = 60.0 bits (30), Expect = 1e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 439 aacaagatatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttat 498
||||| |||||| | ||||||||||| |||||||| ||||||||||| || | |||||
Sbjct: 597 aacaaaatattttcagaaaatgcattcgatgctgttatgcactttgctgccgttgcttac 656
Query: 499 gtgggagagagcacattgga 518
|| || |||||||| |||||
Sbjct: 657 gttggtgagagcacgttgga 676
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 216 cgagttaccattgtggataatctatctagaggaaatatgggagc 259
|||||||||||||||||||| || |||||||| || ||||||||
Sbjct: 471 cgagttaccattgtggataacctttctagagggaacatgggagc 514
Score = 50.1 bits (25), Expect = 0.001
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 111 agtgtgttttctcgccatgaacctggtgttacccacgtcttagtaacaggaggagctggt 170
|||||||| |||||||||||| |||||| || || || || || || |||||||||||
Sbjct: 366 agtgtgttctctcgccatgaaattggtgtgactcatgtgttggtgactggaggagctgga 425
Query: 171 tatattggttcacatgc 187
|| ||||| ||||||||
Sbjct: 426 tacattgggtcacatgc 442
>gb|CB662315.1|CB662315 OSJNEd06D11.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd06D11 5', mRNA sequence
Length = 847
Score = 60.0 bits (30), Expect = 1e-006
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 439 aacaagatatttgctgaaaatgcatttgatgctgtgatgcactttgcagctgnngcttat 498
||||| |||||| | ||||||||||| |||||||| ||||||||||| || | |||||
Sbjct: 597 aacaaaatattttcagaaaatgcattcgatgctgttatgcactttgctgccgttgcttac 656
Query: 499 gtgggagagagcacattgga 518
|| || |||||||| |||||
Sbjct: 657 gttggtgagagcacgttgga 676
Score = 56.0 bits (28), Expect = 2e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 216 cgagttaccattgtggataatctatctagaggaaatatgggagc 259
|||||||||||||||||||| || |||||||| || ||||||||
Sbjct: 471 cgagttaccattgtggataacctttctagagggaacatgggagc 514
Score = 50.1 bits (25), Expect = 0.001
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 111 agtgtgttttctcgccatgaacctggtgttacccacgtcttagtaacaggaggagctggt 170
|||||||| |||||||||||| |||||| || || || || || || |||||||||||
Sbjct: 366 agtgtgttctctcgccatgaaattggtgtgactcatgtgttggtgactggaggagctgga 425
Query: 171 tatattggttcacatgc 187
|| ||||| ||||||||
Sbjct: 426 tacattgggtcacatgc 442
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 679,363
Number of Sequences: 438736
Number of extensions: 679363
Number of successful extensions: 11185
Number of sequences better than 0.5: 57
Number of HSP's better than 0.5 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10822
Number of HSP's gapped (non-prelim): 342
length of query: 523
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 502
effective length of database: 2,791,206,460
effective search space: 1401185642920
effective search space used: 1401185642920
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)