BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBS7b05.xg.2.1
(526 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB643325.1|CB643325 OSJNEb03P11.r OSJNEb Oryza sativa (j... 379 e-102
gb|CB661448.1|CB661448 OSJNEd04F08.r OSJNEd Oryza sativa (j... 379 e-102
dbj|AK121170.1| Oryza sativa (japonica cultivar-group) cDNA... 379 e-102
dbj|AP005420.3| Oryza sativa (japonica cultivar-group) geno... 379 e-102
dbj|AP005579.3| Oryza sativa (japonica cultivar-group) geno... 379 e-102
gb|AACV01020011.1| Oryza sativa (japonica cultivar-group) c... 379 e-102
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 379 e-102
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 379 e-102
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 379 e-102
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 379 e-102
gb|AU082309.1|AU082309 AU082309 Rice panicle at flowering s... 357 4e-096
gb|CF277079.1|CF277079 14ETL--02-H16.g1 Rice etiolated leaf... 357 4e-096
gb|D40673.1|D40673 RICS2778A Rice shoot Oryza sativa (japon... 337 4e-090
gb|CB639145.1|CB639145 OSJNEa08I15.r OSJNEa Oryza sativa (j... 331 2e-088
gb|CV721269.1|CV721269 YBH--03-H23.b1 Rice before heading y... 303 5e-080
gb|CV728643.1|CV728643 FLO--01-B11.g1 Rice flower lambda ph... 242 2e-061
dbj|AK072259.1| Oryza sativa (japonica cultivar-group) cDNA... 242 2e-061
dbj|AK120265.1| Oryza sativa (japonica cultivar-group) cDNA... 242 2e-061
gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06... 242 2e-061
gb|AACV01021752.1| Oryza sativa (japonica cultivar-group) c... 242 2e-061
ref|NM_196933.1| Oryza sativa (japonica cultivar-group) put... 242 2e-061
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 242 2e-061
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 242 2e-061
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 242 2e-061
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 242 2e-061
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 242 2e-061
gb|CB675258.1|CB675258 OSJNEe10O07.r OSJNEe Oryza sativa (j... 234 4e-059
gb|CB647914.1|CB647914 OSJNEb11A21.r OSJNEb Oryza sativa (j... 194 3e-047
gb|CB648833.1|CB648833 OSJNEb12G21.r OSJNEb Oryza sativa (j... 194 3e-047
gb|CB650381.1|CB650381 OSJNEb14M17.r OSJNEb Oryza sativa (j... 194 3e-047
dbj|AK100374.1| Oryza sativa (japonica cultivar-group) cDNA... 194 3e-047
dbj|AK100475.1| Oryza sativa (japonica cultivar-group) cDNA... 194 3e-047
dbj|AK105078.1| Oryza sativa (japonica cultivar-group) cDNA... 194 3e-047
gb|AACV01002349.1| Oryza sativa (japonica cultivar-group) c... 194 3e-047
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 194 3e-047
ref|NM_191233.1| Oryza sativa (japonica cultivar-group), p... 194 3e-047
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 194 3e-047
dbj|AP003237.2| Oryza sativa (japonica cultivar-group) geno... 194 3e-047
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 194 3e-047
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 194 3e-047
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 194 3e-047
gb|CB646550.1|CB646550 OSJNEb09B15.r OSJNEb Oryza sativa (j... 165 3e-038
gb|CB636280.1|CB636280 OSJNEa01J02.r OSJNEa Oryza sativa (j... 111 4e-022
gb|D24979.1|D24979 RICR2879A Rice root Oryza sativa (japoni... 111 4e-022
dbj|AK061688.1| Oryza sativa (japonica cultivar-group) cDNA... 111 4e-022
dbj|AK069196.1| Oryza sativa (japonica cultivar-group) cDNA... 111 4e-022
gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 ... 111 4e-022
gb|AC145384.2| Oryza sativa chromosome 3 BAC OSJNBa0060M17 ... 111 4e-022
gb|AACV01008134.1| Oryza sativa (japonica cultivar-group) c... 111 4e-022
ref|XM_470040.1| Oryza sativa (japonica cultivar-group), mRNA 111 4e-022
ref|NT_107188.1| Oryza sativa (japonica cultivar-group) 111 4e-022
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 111 4e-022
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 111 4e-022
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 111 4e-022
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 111 4e-022
gb|D24381.1|D24381 RICR1814A Rice root Oryza sativa (japoni... 107 6e-021
gb|AC132494.1| Oryza sativa (japonica cultivar-group) chrom... 105 2e-020
dbj|AK060079.1| Oryza sativa (japonica cultivar-group) cDNA... 105 2e-020
dbj|AK067967.1| Oryza sativa (japonica cultivar-group) cDNA... 105 2e-020
dbj|AK098978.1| Oryza sativa (japonica cultivar-group) cDNA... 105 2e-020
dbj|AK099228.1| Oryza sativa (japonica cultivar-group) cDNA... 105 2e-020
dbj|AK099281.1| Oryza sativa (japonica cultivar-group) cDNA... 105 2e-020
dbj|AK100188.1| Oryza sativa (japonica cultivar-group) cDNA... 105 2e-020
dbj|AK102140.1| Oryza sativa (japonica cultivar-group) cDNA... 105 2e-020
gb|AC144738.2| Oryza sativa (japonica cultivar-group) chrom... 105 2e-020
gb|AC135426.2| Oryza sativa (japonica cultivar-group) chrom... 105 2e-020
gb|AACV01011005.1| Oryza sativa (japonica cultivar-group) c... 105 2e-020
ref|NT_107223.1| Oryza sativa (japonica cultivar-group) 105 2e-020
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 105 2e-020
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 105 2e-020
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 105 2e-020
dbj|AK060838.1| Oryza sativa (japonica cultivar-group) cDNA... 98 6e-018
gb|AU096339.1|AU096339 AU096339 Rice green shoot Oryza sati... 96 2e-017
gb|D24711.1|D24711 RICR2417A Rice root Oryza sativa (japoni... 92 4e-016
gb|AU082170.1|AU082170 AU082170 Rice green shoot Oryza sati... 92 4e-016
gb|CF277609.1|CF277609 14ETL--03-D13.b1 Rice etiolated leaf... 92 4e-016
dbj|AK062007.1| Oryza sativa (japonica cultivar-group) cDNA... 92 4e-016
dbj|AK072356.1| Oryza sativa (japonica cultivar-group) cDNA... 92 4e-016
dbj|AP003837.2| Oryza sativa (japonica cultivar-group) geno... 92 4e-016
dbj|AP003748.4| Oryza sativa (japonica cultivar-group) geno... 92 4e-016
gb|AACV01015403.1| Oryza sativa (japonica cultivar-group) c... 92 4e-016
ref|XM_477093.1| Oryza sativa (japonica cultivar-group), mRNA 92 4e-016
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 92 4e-016
gb|CH401220.1| Oryza sativa (japonica cultivar-group) chrom... 92 4e-016
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 92 4e-016
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 92 4e-016
gb|AU174803.1|AU174803 AU174803 Rice cDNA from leaf Oryza s... 80 1e-012
gb|D24945.2|D24945 RICR2825A Rice root Oryza sativa (japoni... 62 3e-007
gb|D48053.1|D48053 RICS13983A Rice green shoot Oryza sativa... 58 5e-006
gb|CF311260.1|CF311260 ABF--06-G16.b1 ABF3-overexpressing t... 58 5e-006
gb|D48612.2|D48612 RICS14935A Rice green shoot Oryza sativa... 58 5e-006
dbj|AK062154.1| Oryza sativa (japonica cultivar-group) cDNA... 58 5e-006
dbj|AK067386.1| Oryza sativa (japonica cultivar-group) cDNA... 58 5e-006
dbj|AK071976.1| Oryza sativa (japonica cultivar-group) cDNA... 58 5e-006
dbj|AK121193.1| Oryza sativa (japonica cultivar-group) cDNA... 58 5e-006
dbj|AP004298.4| Oryza sativa (japonica cultivar-group) geno... 58 5e-006
dbj|AP005248.4| Oryza sativa (japonica cultivar-group) geno... 58 5e-006
gb|AACV01015914.1| Oryza sativa (japonica cultivar-group) c... 58 5e-006
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 58 5e-006
gb|CH401223.1| Oryza sativa (japonica cultivar-group) chrom... 58 5e-006
gb|AU068488.1|AU068488 AU068488 Rice callus Oryza sativa (j... 54 8e-005
gb|CB000645.1|CB000645 S345Q_E04 Rice cold stress germinati... 54 8e-005
gb|CF309533.1|CF309533 ABF--03-M03.g1 ABF3-overexpressing t... 54 8e-005
gb|CF323718.1|CF323718 HDN--04-J12.g1 OsHDAC1-overexpressin... 54 8e-005
dbj|AP003945.1| Oryza sativa (japonica cultivar-group) chro... 54 8e-005
dbj|AK059649.1| Oryza sativa (japonica cultivar-group) cDNA... 54 8e-005
dbj|AK100914.1| Oryza sativa (japonica cultivar-group) cDNA... 54 8e-005
dbj|AP005824.4| Oryza sativa (japonica cultivar-group) geno... 54 8e-005
gb|AACV01015596.1| Oryza sativa (japonica cultivar-group) c... 54 8e-005
ref|XM_477282.1| Oryza sativa (japonica cultivar-group), mRNA 54 8e-005
gb|CH401221.1| Oryza sativa (japonica cultivar-group) chrom... 54 8e-005
dbj|AK073561.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.001
gb|AU174034.1|AU174034 AU174034 Rice green shoot Oryza sati... 44 0.075
gb|CA755226.1|CA755226 BR030016000_PLATE_A04_25_023.ab1 OA ... 44 0.075
dbj|AK072829.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.29
gb|AC124143.2| Oryza sativa (japonica cultivar-group) chrom... 42 0.29
gb|AC113333.2| Oryza sativa (japonica cultivar-group) chrom... 42 0.29
gb|AACV01012712.1| Oryza sativa (japonica cultivar-group) c... 42 0.29
ref|NT_107221.1| Oryza sativa (japonica cultivar-group) 42 0.29
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.29
>gb|CB643325.1|CB643325 OSJNEb03P11.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03P11 3', mRNA sequence
Length = 792
Score = 379 bits (191), Expect = e-102
Identities = 263/287 (91%)
Strand = Plus / Plus
Query: 237 ctcagcagttgatgccacactgcctgacgtcgggccccttggtcctgacgatgaagggat 296
|||||||||||||||| |||||||||||||| || ||| ||| | ||| | |||||||||
Sbjct: 183 ctcagcagttgatgccgcactgcctgacgtcagggcccctggccttgatggtgaagggat 242
Query: 297 cgatcctgacccagagcagggagaagatggaggccagcagcacggaccagatgacgacaa 356
| |||||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||
Sbjct: 243 caatcctgacccagagcaaggaaaagatggaggcgagcagcacggaccagatgacaacaa 302
Query: 357 tggtgggcgtccggttctggcgccccatgagccccttgaggaacgggtagaggtggacga 416
||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||
Sbjct: 303 tggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtagaggtggacga 362
Query: 417 tgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgttgt 476
||||||||||||||||||||||||| ||||||||||||||||||| || | | |||||||
Sbjct: 363 tgacccagaaggcgaagaagagcttcccgaagagcgggccccacgcctcggagccgttgt 422
Query: 477 tgatggcgtcggagatgccggccacgacgccgatgatgttgatgatg 523
||||||||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 423 tgatggcgtcggagacgccggcgacgacgccgatgatgttgaggatg 469
>gb|CB661448.1|CB661448 OSJNEd04F08.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd04F08 3', mRNA sequence
Length = 835
Score = 379 bits (191), Expect = e-102
Identities = 263/287 (91%)
Strand = Plus / Plus
Query: 237 ctcagcagttgatgccacactgcctgacgtcgggccccttggtcctgacgatgaagggat 296
|||||||||||||||| |||||||||||||| || ||| ||| | ||| | |||||||||
Sbjct: 235 ctcagcagttgatgccgcactgcctgacgtcagggcccctggccttgatggtgaagggat 294
Query: 297 cgatcctgacccagagcagggagaagatggaggccagcagcacggaccagatgacgacaa 356
| |||||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||
Sbjct: 295 caatcctgacccagagcaaggaaaagatggaggcgagcagcacggaccagatgacaacaa 354
Query: 357 tggtgggcgtccggttctggcgccccatgagccccttgaggaacgggtagaggtggacga 416
||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||
Sbjct: 355 tggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtagaggtggacga 414
Query: 417 tgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgttgt 476
||||||||||||||||||||||||| ||||||||||||||||||| || | | |||||||
Sbjct: 415 tgacccagaaggcgaagaagagcttcccgaagagcgggccccacgcctcggagccgttgt 474
Query: 477 tgatggcgtcggagatgccggccacgacgccgatgatgttgatgatg 523
||||||||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 475 tgatggcgtcggagacgccggcgacgacgccgatgatgttgaggatg 521
>dbj|AK121170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081B08, full
insert sequence
Length = 3631
Score = 379 bits (191), Expect = e-102
Identities = 263/287 (91%)
Strand = Plus / Minus
Query: 237 ctcagcagttgatgccacactgcctgacgtcgggccccttggtcctgacgatgaagggat 296
|||||||||||||||| |||||||||||||| || ||| ||| | ||| | |||||||||
Sbjct: 3264 ctcagcagttgatgccgcactgcctgacgtcagggcccctggccttgatggtgaagggat 3205
Query: 297 cgatcctgacccagagcagggagaagatggaggccagcagcacggaccagatgacgacaa 356
| |||||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||
Sbjct: 3204 caatcctgacccagagcaaggaaaagatggaggcgagcagcacggaccagatgacaacaa 3145
Query: 357 tggtgggcgtccggttctggcgccccatgagccccttgaggaacgggtagaggtggacga 416
||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||
Sbjct: 3144 tggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtagaggtggacga 3085
Query: 417 tgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgttgt 476
||||||||||||||||||||||||| ||||||||||||||||||| || | | |||||||
Sbjct: 3084 tgacccagaaggcgaagaagagcttcccgaagagcgggccccacgcctcggagccgttgt 3025
Query: 477 tgatggcgtcggagatgccggccacgacgccgatgatgttgatgatg 523
||||||||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 3024 tgatggcgtcggagacgccggcgacgacgccgatgatgttgaggatg 2978
>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0418B08
Length = 165909
Score = 379 bits (191), Expect = e-102
Identities = 263/287 (91%)
Strand = Plus / Minus
Query: 237 ctcagcagttgatgccacactgcctgacgtcgggccccttggtcctgacgatgaagggat 296
|||||||||||||||| |||||||||||||| || ||| ||| | ||| | |||||||||
Sbjct: 10064 ctcagcagttgatgccgcactgcctgacgtcagggcccctggccttgatggtgaagggat 10005
Query: 297 cgatcctgacccagagcagggagaagatggaggccagcagcacggaccagatgacgacaa 356
| |||||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||
Sbjct: 10004 caatcctgacccagagcaaggaaaagatggaggcgagcagcacggaccagatgacaacaa 9945
Query: 357 tggtgggcgtccggttctggcgccccatgagccccttgaggaacgggtagaggtggacga 416
||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||
Sbjct: 9944 tggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtagaggtggacga 9885
Query: 417 tgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgttgt 476
||||||||||||||||||||||||| ||||||||||||||||||| || | | |||||||
Sbjct: 9884 tgacccagaaggcgaagaagagcttcccgaagagcgggccccacgcctcggagccgttgt 9825
Query: 477 tgatggcgtcggagatgccggccacgacgccgatgatgttgatgatg 523
||||||||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 9824 tgatggcgtcggagacgccggcgacgacgccgatgatgttgaggatg 9778
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:OJ1740_D06
Length = 187410
Score = 379 bits (191), Expect = e-102
Identities = 263/287 (91%)
Strand = Plus / Minus
Query: 237 ctcagcagttgatgccacactgcctgacgtcgggccccttggtcctgacgatgaagggat 296
|||||||||||||||| |||||||||||||| || ||| ||| | ||| | |||||||||
Sbjct: 124851 ctcagcagttgatgccgcactgcctgacgtcagggcccctggccttgatggtgaagggat 124792
Query: 297 cgatcctgacccagagcagggagaagatggaggccagcagcacggaccagatgacgacaa 356
| |||||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||
Sbjct: 124791 caatcctgacccagagcaaggaaaagatggaggcgagcagcacggaccagatgacaacaa 124732
Query: 357 tggtgggcgtccggttctggcgccccatgagccccttgaggaacgggtagaggtggacga 416
||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||
Sbjct: 124731 tggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtagaggtggacga 124672
Query: 417 tgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgttgt 476
||||||||||||||||||||||||| ||||||||||||||||||| || | | |||||||
Sbjct: 124671 tgacccagaaggcgaagaagagcttcccgaagagcgggccccacgcctcggagccgttgt 124612
Query: 477 tgatggcgtcggagatgccggccacgacgccgatgatgttgatgatg 523
||||||||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 124611 tgatggcgtcggagacgccggcgacgacgccgatgatgttgaggatg 124565
>gb|AACV01020011.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020011, whole
genome shotgun sequence
Length = 29808
Score = 379 bits (191), Expect = e-102
Identities = 263/287 (91%)
Strand = Plus / Plus
Query: 237 ctcagcagttgatgccacactgcctgacgtcgggccccttggtcctgacgatgaagggat 296
|||||||||||||||| |||||||||||||| || ||| ||| | ||| | |||||||||
Sbjct: 14477 ctcagcagttgatgccgcactgcctgacgtcagggcccctggccttgatggtgaagggat 14536
Query: 297 cgatcctgacccagagcagggagaagatggaggccagcagcacggaccagatgacgacaa 356
| |||||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||
Sbjct: 14537 caatcctgacccagagcaaggaaaagatggaggcgagcagcacggaccagatgacaacaa 14596
Query: 357 tggtgggcgtccggttctggcgccccatgagccccttgaggaacgggtagaggtggacga 416
||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||
Sbjct: 14597 tggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtagaggtggacga 14656
Query: 417 tgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgttgt 476
||||||||||||||||||||||||| ||||||||||||||||||| || | | |||||||
Sbjct: 14657 tgacccagaaggcgaagaagagcttcccgaagagcgggccccacgcctcggagccgttgt 14716
Query: 477 tgatggcgtcggagatgccggccacgacgccgatgatgttgatgatg 523
||||||||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 14717 tgatggcgtcggagacgccggcgacgacgccgatgatgttgaggatg 14763
>ref|NT_107084.1| Oryza sativa (japonica cultivar-group)
Length = 4175757
Score = 379 bits (191), Expect = e-102
Identities = 263/287 (91%)
Strand = Plus / Minus
Query: 237 ctcagcagttgatgccacactgcctgacgtcgggccccttggtcctgacgatgaagggat 296
|||||||||||||||| |||||||||||||| || ||| ||| | ||| | |||||||||
Sbjct: 922678 ctcagcagttgatgccgcactgcctgacgtcagggcccctggccttgatggtgaagggat 922619
Query: 297 cgatcctgacccagagcagggagaagatggaggccagcagcacggaccagatgacgacaa 356
| |||||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||
Sbjct: 922618 caatcctgacccagagcaaggaaaagatggaggcgagcagcacggaccagatgacaacaa 922559
Query: 357 tggtgggcgtccggttctggcgccccatgagccccttgaggaacgggtagaggtggacga 416
||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||
Sbjct: 922558 tggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtagaggtggacga 922499
Query: 417 tgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgttgt 476
||||||||||||||||||||||||| ||||||||||||||||||| || | | |||||||
Sbjct: 922498 tgacccagaaggcgaagaagagcttcccgaagagcgggccccacgcctcggagccgttgt 922439
Query: 477 tgatggcgtcggagatgccggccacgacgccgatgatgttgatgatg 523
||||||||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 922438 tgatggcgtcggagacgccggcgacgacgccgatgatgttgaggatg 922392
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 379 bits (191), Expect = e-102
Identities = 263/287 (91%)
Strand = Plus / Minus
Query: 237 ctcagcagttgatgccacactgcctgacgtcgggccccttggtcctgacgatgaagggat 296
|||||||||||||||| |||||||||||||| || ||| ||| | ||| | |||||||||
Sbjct: 4554725 ctcagcagttgatgccgcactgcctgacgtcagggcccctggccttgatggtgaagggat 4554666
Query: 297 cgatcctgacccagagcagggagaagatggaggccagcagcacggaccagatgacgacaa 356
| |||||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||
Sbjct: 4554665 caatcctgacccagagcaaggaaaagatggaggcgagcagcacggaccagatgacaacaa 4554606
Query: 357 tggtgggcgtccggttctggcgccccatgagccccttgaggaacgggtagaggtggacga 416
||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||
Sbjct: 4554605 tggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtagaggtggacga 4554546
Query: 417 tgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgttgt 476
||||||||||||||||||||||||| ||||||||||||||||||| || | | |||||||
Sbjct: 4554545 tgacccagaaggcgaagaagagcttcccgaagagcgggccccacgcctcggagccgttgt 4554486
Query: 477 tgatggcgtcggagatgccggccacgacgccgatgatgttgatgatg 523
||||||||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 4554485 tgatggcgtcggagacgccggcgacgacgccgatgatgttgaggatg 4554439
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 379 bits (191), Expect = e-102
Identities = 263/287 (91%)
Strand = Plus / Minus
Query: 237 ctcagcagttgatgccacactgcctgacgtcgggccccttggtcctgacgatgaagggat 296
|||||||||||||||| |||||||||||||| || ||| ||| | ||| | |||||||||
Sbjct: 14028536 ctcagcagttgatgccgcactgcctgacgtcagggcccctggccttgatggtgaagggat 14028477
Query: 297 cgatcctgacccagagcagggagaagatggaggccagcagcacggaccagatgacgacaa 356
| |||||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||
Sbjct: 14028476 caatcctgacccagagcaaggaaaagatggaggcgagcagcacggaccagatgacaacaa 14028417
Query: 357 tggtgggcgtccggttctggcgccccatgagccccttgaggaacgggtagaggtggacga 416
||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||
Sbjct: 14028416 tggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtagaggtggacga 14028357
Query: 417 tgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgttgt 476
||||||||||||||||||||||||| ||||||||||||||||||| || | | |||||||
Sbjct: 14028356 tgacccagaaggcgaagaagagcttcccgaagagcgggccccacgcctcggagccgttgt 14028297
Query: 477 tgatggcgtcggagatgccggccacgacgccgatgatgttgatgatg 523
||||||||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 14028296 tgatggcgtcggagacgccggcgacgacgccgatgatgttgaggatg 14028250
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 379 bits (191), Expect = e-102
Identities = 263/287 (91%)
Strand = Plus / Minus
Query: 237 ctcagcagttgatgccacactgcctgacgtcgggccccttggtcctgacgatgaagggat 296
|||||||||||||||| |||||||||||||| || ||| ||| | ||| | |||||||||
Sbjct: 15230875 ctcagcagttgatgccgcactgcctgacgtcagggcccctggccttgatggtgaagggat 15230816
Query: 297 cgatcctgacccagagcagggagaagatggaggccagcagcacggaccagatgacgacaa 356
| |||||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||
Sbjct: 15230815 caatcctgacccagagcaaggaaaagatggaggcgagcagcacggaccagatgacaacaa 15230756
Query: 357 tggtgggcgtccggttctggcgccccatgagccccttgaggaacgggtagaggtggacga 416
||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||
Sbjct: 15230755 tggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtagaggtggacga 15230696
Query: 417 tgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgttgt 476
||||||||||||||||||||||||| ||||||||||||||||||| || | | |||||||
Sbjct: 15230695 tgacccagaaggcgaagaagagcttcccgaagagcgggccccacgcctcggagccgttgt 15230636
Query: 477 tgatggcgtcggagatgccggccacgacgccgatgatgttgatgatg 523
||||||||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 15230635 tgatggcgtcggagacgccggcgacgacgccgatgatgttgaggatg 15230589
>gb|AU082309.1|AU082309 AU082309 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1220, mRNA sequence
Length = 658
Score = 357 bits (180), Expect = 4e-096
Identities = 261/287 (90%), Gaps = 1/287 (0%)
Strand = Plus / Minus
Query: 237 ctcagcagttgatgccacactgcctgacgtcgggccccttggtcctgacgatgaagggat 296
|||||||||||||||| |||||||||||||| || ||| ||| | ||| | |||||||||
Sbjct: 443 ctcagcagttgatgccgcactgcctgacgtcagggcccctggccttgatggtgaagggat 384
Query: 297 cgatcctgacccagagcagggagaagatggaggccagcagcacggaccagatgacgacaa 356
| |||||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||
Sbjct: 383 caatcctgacccagagcaaggaaaagatggaggcgagcagcacggaccagatgacaacaa 324
Query: 357 tggtgggcgtccggttctggcgccccatgagccccttgaggaacgggtagaggtggacga 416
||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||
Sbjct: 323 tggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtagaggtggacga 264
Query: 417 tgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgttgt 476
||||||||||||||||||||||||| ||||||||||||||||||| || | | |||||||
Sbjct: 263 tgacccagaaggcgaagaagagcttcccgaagagcgggccccacgcctcggagccgttgt 204
Query: 477 tgatggcgtcggagatgccggccacgacgccgatgatgttgatgatg 523
||||||||||||||| | ||| ||||||||||||||||||| ||||
Sbjct: 203 tgatggcgtcggaga-ncgggcgacgacgccgatgatgttgaggatg 158
>gb|CF277079.1|CF277079 14ETL--02-H16.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--02-H16, mRNA sequence
Length = 488
Score = 357 bits (180), Expect = 4e-096
Identities = 262/288 (90%), Gaps = 1/288 (0%)
Strand = Plus / Plus
Query: 237 ctcagcagttgatgccacactgcctgacgtcgggccccttggtcctgacgatgaagggat 296
|||||||||||||||| |||||||||||||| || ||| ||| | ||| | |||||||||
Sbjct: 201 ctcagcagttgatgccgcactgcctgacgtcagggcccctggccttgatggtgaagggat 260
Query: 297 cgatcctgacccagagcagggagaagatggaggccagcagcacggaccagatgacgacaa 356
| |||||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||
Sbjct: 261 caatcctgacccagagcaaggaaaagatggaggcgagcagcacggaccagatgacaacaa 320
Query: 357 tggtgggcgtccggttctggcgccccatgagccccttgaggaacgggt-agaggtggacg 415
||||||||||||||||||| | ||||||||||||||||||||| |||| |||||||||||
Sbjct: 321 tggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtnagaggtggacg 380
Query: 416 atgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgttg 475
|||||||||||||||||||||||||| ||||||||||||||||||| || | ||||||
Sbjct: 381 atgacccagaaggcgaagaagagcttcccgaagagcgggccccacgcctcggggccgttg 440
Query: 476 ttgatggcgtcggagatgccggccacgacgccgatgatgttgatgatg 523
|||||||||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 441 ttgatggcgtcggagacgccggcgacgacgccgatgatgttgaggatg 488
>gb|D40673.1|D40673 RICS2778A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 357
Score = 337 bits (170), Expect = 4e-090
Identities = 257/285 (90%), Gaps = 1/285 (0%)
Strand = Plus / Minus
Query: 240 agcagttgatgccacactgcctgac-gtcgggccccttggtcctgacgatgaagggatcg 298
||||||||||||| |||||||||| ||| || ||| ||| | ||| | ||||||||||
Sbjct: 292 agcagttgatgccgaactgcctgaccgtcagggcccctggccttgatggtgaagggatca 233
Query: 299 atcctgacccagagcagggagaagatggaggccagcagcacggaccagatgacgacaatg 358
|||||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||||
Sbjct: 232 atcctgacccagagcaaggaaaagatggaggcgagcagcacggaccagatgacaacaatg 173
Query: 359 gtgggcgtccggttctggcgccccatgagccccttgaggaacgggtagaggtggacgatg 418
||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 172 gtgggcgtccggttctgcctccccatgagccccttgaggaaggggtagaggtggacgatg 113
Query: 419 acccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgttgttg 478
||||||||||||||||||||||| ||||||||||||||||||| || | | |||||||||
Sbjct: 112 acccagaaggcgaagaagagcttcccgaagagcgggccccacgcctcggagccgttgttg 53
Query: 479 atggcgtcggagatgccggccacgacgccgatgatgttgatgatg 523
| |||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 52 antgcgtcggagacgccggcgacgacgccgatgatgttgaggatg 8
>gb|CB639145.1|CB639145 OSJNEa08I15.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa08I15 3', mRNA sequence
Length = 534
Score = 331 bits (167), Expect = 2e-088
Identities = 257/287 (89%)
Strand = Plus / Plus
Query: 237 ctcagcagttgatgccacactgcctgacgtcgggccccttggtcctgacgatgaagggat 296
|||| ||||||||||| |||||||||||||| || ||| ||| | ||| | |||||||||
Sbjct: 156 ctcaacagttgatgccgcactgcctgacgtcagggcccctggccttgatggtgaagggat 215
Query: 297 cgatcctgacccagagcagggagaagatggaggccagcagcacggaccagatgacgacaa 356
| |||||||||||||||| ||| ||||||| ||| |||||||||||||| ||||| ||||
Sbjct: 216 caatcctgacccagagcaaggaaaagatgggggcgagcagcacggaccaaatgacaacaa 275
Query: 357 tggtgggcgtccggttctggcgccccatgagccccttgaggaacgggtagaggtggacga 416
||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||| |
Sbjct: 276 tggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtagaggtggacca 335
Query: 417 tgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgttgt 476
||||||| |||||||| |||||||| ||||||||||||||||||| || | | |||||||
Sbjct: 336 tgacccaaaaggcgaaaaagagcttcccgaagagcgggccccacgcctcggagccgttgt 395
Query: 477 tgatggcgtcggagatgccggccacgacgccgatgatgttgatgatg 523
||||||||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 396 tgatggcgtcggagacgccggcgacgacgccgatgatgttgaggatg 442
>gb|CV721269.1|CV721269 YBH--03-H23.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--03-H23, mRNA sequence
Length = 432
Score = 303 bits (153), Expect = 5e-080
Identities = 222/245 (90%)
Strand = Plus / Minus
Query: 237 ctcagcagttgatgccacactgcctgacgtcgggccccttggtcctgacgatgaagggat 296
|||||||||||||||| |||||||||||||| || ||| ||| | ||| | |||||||||
Sbjct: 356 ctcagcagttgatgccgcactgcctgacgtcagggcccctggccttgatggtgaagggat 297
Query: 297 cgatcctgacccagagcagggagaagatggaggccagcagcacggaccagatgacgacaa 356
| |||||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||
Sbjct: 296 caatcctgacccagagcaaggaaaagatggaggcgagcagcacggaccagatgacaacaa 237
Query: 357 tggtgggcgtccggttctggcgccccatgagccccttgaggaacgggtagaggtggacga 416
||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||
Sbjct: 236 tggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtagaggtggacga 177
Query: 417 tgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgttgt 476
|||||||||||||||||||||| | ||||||||||||||||||| || | | |||||||
Sbjct: 176 tgacccagaaggcgaagaagagaataccgaagagcgggccccacgcctcggagccgttgt 117
Query: 477 tgatg 481
|||||
Sbjct: 116 tgatg 112
>gb|CV728643.1|CV728643 FLO--01-B11.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--01-B11,
mRNA sequence
Length = 319
Score = 242 bits (122), Expect = 2e-061
Identities = 194/218 (88%)
Strand = Plus / Minus
Query: 286 gatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacca 345
||||||||| |||||||||||||||| ||||||||||||||||| || || | ||||||
Sbjct: 278 gatgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggacca 219
Query: 346 gatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggta 405
|| |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||
Sbjct: 218 gagcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggta 159
Query: 406 gaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 465
|||||||| |||||||||||||| |||||||||||| ||||| |||||||||||||||
Sbjct: 158 gaggtggaggatgacccagaaggagaagaagagcttcccgaacagcgggccccacgaccc 99
Query: 466 gtacccgttgttgatggcgtcggagatgccggccacga 503
|||||||||||| | |||||| || | |||||| ||||
Sbjct: 98 gtacccgttgttcacggcgtccgacacgccggcgacga 61
>dbj|AK072259.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009D02, full
insert sequence
Length = 3426
Score = 242 bits (122), Expect = 2e-061
Identities = 194/218 (88%)
Strand = Plus / Minus
Query: 286 gatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacca 345
||||||||| |||||||||||||||| ||||||||||||||||| || || | ||||||
Sbjct: 3177 gatgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggacca 3118
Query: 346 gatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggta 405
|| |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||
Sbjct: 3117 gagcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggta 3058
Query: 406 gaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 465
|||||||| |||||||||||||| |||||||||||| ||||| |||||||||||||||
Sbjct: 3057 gaggtggaggatgacccagaaggagaagaagagcttcccgaacagcgggccccacgaccc 2998
Query: 466 gtacccgttgttgatggcgtcggagatgccggccacga 503
|||||||||||| | |||||| || | |||||| ||||
Sbjct: 2997 gtacccgttgttcacggcgtccgacacgccggcgacga 2960
>dbj|AK120265.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047D23, full
insert sequence
Length = 612
Score = 242 bits (122), Expect = 2e-061
Identities = 194/218 (88%)
Strand = Plus / Minus
Query: 286 gatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacca 345
||||||||| |||||||||||||||| ||||||||||||||||| || || | ||||||
Sbjct: 403 gatgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggacca 344
Query: 346 gatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggta 405
|| |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||
Sbjct: 343 gagcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggta 284
Query: 406 gaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 465
|||||||| |||||||||||||| |||||||||||| ||||| |||||||||||||||
Sbjct: 283 gaggtggaggatgacccagaaggagaagaagagcttcccgaacagcgggccccacgaccc 224
Query: 466 gtacccgttgttgatggcgtcggagatgccggccacga 503
|||||||||||| | |||||| || | |||||| ||||
Sbjct: 223 gtacccgttgttcacggcgtccgacacgccggcgacga 186
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete
sequence
Length = 162339
Score = 242 bits (122), Expect = 2e-061
Identities = 194/218 (88%)
Strand = Plus / Minus
Query: 286 gatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacca 345
||||||||| |||||||||||||||| ||||||||||||||||| || || | ||||||
Sbjct: 95864 gatgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggacca 95805
Query: 346 gatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggta 405
|| |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||
Sbjct: 95804 gagcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggta 95745
Query: 406 gaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 465
|||||||| |||||||||||||| |||||||||||| ||||| |||||||||||||||
Sbjct: 95744 gaggtggaggatgacccagaaggagaagaagagcttcccgaacagcgggccccacgaccc 95685
Query: 466 gtacccgttgttgatggcgtcggagatgccggccacga 503
|||||||||||| | |||||| || | |||||| ||||
Sbjct: 95684 gtacccgttgttcacggcgtccgacacgccggcgacga 95647
>gb|AACV01021752.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021752, whole
genome shotgun sequence
Length = 96066
Score = 242 bits (122), Expect = 2e-061
Identities = 194/218 (88%)
Strand = Plus / Plus
Query: 286 gatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacca 345
||||||||| |||||||||||||||| ||||||||||||||||| || || | ||||||
Sbjct: 28206 gatgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggacca 28265
Query: 346 gatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggta 405
|| |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||
Sbjct: 28266 gagcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggta 28325
Query: 406 gaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 465
|||||||| |||||||||||||| |||||||||||| ||||| |||||||||||||||
Sbjct: 28326 gaggtggaggatgacccagaaggagaagaagagcttcccgaacagcgggccccacgaccc 28385
Query: 466 gtacccgttgttgatggcgtcggagatgccggccacga 503
|||||||||||| | |||||| || | |||||| ||||
Sbjct: 28386 gtacccgttgttcacggcgtccgacacgccggcgacga 28423
>ref|NM_196933.1| Oryza sativa (japonica cultivar-group) putative cellulose synthase
(OSJNBa0006L06.10), mRNA
Length = 3408
Score = 242 bits (122), Expect = 2e-061
Identities = 194/218 (88%)
Strand = Plus / Minus
Query: 286 gatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacca 345
||||||||| |||||||||||||||| ||||||||||||||||| || || | ||||||
Sbjct: 3144 gatgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggacca 3085
Query: 346 gatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggta 405
|| |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||
Sbjct: 3084 gagcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggta 3025
Query: 406 gaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 465
|||||||| |||||||||||||| |||||||||||| ||||| |||||||||||||||
Sbjct: 3024 gaggtggaggatgacccagaaggagaagaagagcttcccgaacagcgggccccacgaccc 2965
Query: 466 gtacccgttgttgatggcgtcggagatgccggccacga 503
|||||||||||| | |||||| || | |||||| ||||
Sbjct: 2964 gtacccgttgttcacggcgtccgacacgccggcgacga 2927
>ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4809259
Score = 242 bits (122), Expect = 2e-061
Identities = 194/218 (88%)
Strand = Plus / Minus
Query: 286 gatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacca 345
||||||||| |||||||||||||||| ||||||||||||||||| || || | ||||||
Sbjct: 3483778 gatgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggacca 3483719
Query: 346 gatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggta 405
|| |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||
Sbjct: 3483718 gagcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggta 3483659
Query: 406 gaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 465
|||||||| |||||||||||||| |||||||||||| ||||| |||||||||||||||
Sbjct: 3483658 gaggtggaggatgacccagaaggagaagaagagcttcccgaacagcgggccccacgaccc 3483599
Query: 466 gtacccgttgttgatggcgtcggagatgccggccacga 503
|||||||||||| | |||||| || | |||||| ||||
Sbjct: 3483598 gtacccgttgttcacggcgtccgacacgccggcgacga 3483561
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 242 bits (122), Expect = 2e-061
Identities = 194/218 (88%)
Strand = Plus / Minus
Query: 286 gatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacca 345
||||||||| |||||||||||||||| ||||||||||||||||| || || | ||||||
Sbjct: 4666247 gatgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggacca 4666188
Query: 346 gatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggta 405
|| |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||
Sbjct: 4666187 gagcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggta 4666128
Query: 406 gaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 465
|||||||| |||||||||||||| |||||||||||| ||||| |||||||||||||||
Sbjct: 4666127 gaggtggaggatgacccagaaggagaagaagagcttcccgaacagcgggccccacgaccc 4666068
Query: 466 gtacccgttgttgatggcgtcggagatgccggccacga 503
|||||||||||| | |||||| || | |||||| ||||
Sbjct: 4666067 gtacccgttgttcacggcgtccgacacgccggcgacga 4666030
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 242 bits (122), Expect = 2e-061
Identities = 194/218 (88%)
Strand = Plus / Minus
Query: 286 gatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacca 345
||||||||| |||||||||||||||| ||||||||||||||||| || || | ||||||
Sbjct: 15532041 gatgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggacca 15531982
Query: 346 gatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggta 405
|| |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||
Sbjct: 15531981 gagcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggta 15531922
Query: 406 gaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 465
|||||||| |||||||||||||| |||||||||||| ||||| |||||||||||||||
Sbjct: 15531921 gaggtggaggatgacccagaaggagaagaagagcttcccgaacagcgggccccacgaccc 15531862
Query: 466 gtacccgttgttgatggcgtcggagatgccggccacga 503
|||||||||||| | |||||| || | |||||| ||||
Sbjct: 15531861 gtacccgttgttcacggcgtccgacacgccggcgacga 15531824
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 242 bits (122), Expect = 2e-061
Identities = 194/218 (88%)
Strand = Plus / Minus
Query: 286 gatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacca 345
||||||||| |||||||||||||||| ||||||||||||||||| || || | ||||||
Sbjct: 16751347 gatgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggacca 16751288
Query: 346 gatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggta 405
|| |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||
Sbjct: 16751287 gagcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggta 16751228
Query: 406 gaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 465
|||||||| |||||||||||||| |||||||||||| ||||| |||||||||||||||
Sbjct: 16751227 gaggtggaggatgacccagaaggagaagaagagcttcccgaacagcgggccccacgaccc 16751168
Query: 466 gtacccgttgttgatggcgtcggagatgccggccacga 503
|||||||||||| | |||||| || | |||||| ||||
Sbjct: 16751167 gtacccgttgttcacggcgtccgacacgccggcgacga 16751130
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 242 bits (122), Expect = 2e-061
Identities = 194/218 (88%)
Strand = Plus / Minus
Query: 286 gatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacca 345
||||||||| |||||||||||||||| ||||||||||||||||| || || | ||||||
Sbjct: 16760387 gatgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggacca 16760328
Query: 346 gatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggta 405
|| |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||
Sbjct: 16760327 gagcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggta 16760268
Query: 406 gaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 465
|||||||| |||||||||||||| |||||||||||| ||||| |||||||||||||||
Sbjct: 16760267 gaggtggaggatgacccagaaggagaagaagagcttcccgaacagcgggccccacgaccc 16760208
Query: 466 gtacccgttgttgatggcgtcggagatgccggccacga 503
|||||||||||| | |||||| || | |||||| ||||
Sbjct: 16760207 gtacccgttgttcacggcgtccgacacgccggcgacga 16760170
>gb|CB675258.1|CB675258 OSJNEe10O07.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe10O07 3', mRNA sequence
Length = 786
Score = 234 bits (118), Expect = 4e-059
Identities = 193/218 (88%)
Strand = Plus / Plus
Query: 286 gatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacca 345
||||||||| |||||||||||||||| ||||||||||||||||| || || | ||||||
Sbjct: 246 gatgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggacca 305
Query: 346 gatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggta 405
| |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||
Sbjct: 306 aagcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggta 365
Query: 406 gaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactg 465
|||||||| |||||||||||||| |||||||||||| ||||| |||||||||||||||
Sbjct: 366 gaggtggaggatgacccagaaggagaagaagagcttcccgaacagcgggccccacgaccc 425
Query: 466 gtacccgttgttgatggcgtcggagatgccggccacga 503
|||||||||||| | |||||| || | |||||| ||||
Sbjct: 426 gtacccgttgttcacggcgtccgacacgccggcgacga 463
>gb|CB647914.1|CB647914 OSJNEb11A21.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb11A21 3', mRNA sequence
Length = 811
Score = 194 bits (98), Expect = 3e-047
Identities = 200/234 (85%)
Strand = Plus / Plus
Query: 285 cgatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacc 344
||||||| || |||||| |||||||||| |||||||||| |||||| ||||| || ||||
Sbjct: 452 cgatgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagacc 511
Query: 345 agatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggt 404
||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||
Sbjct: 512 agagcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggt 571
Query: 405 agaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgact 464
| | ||| | ||| ||||| | ||||||||| | ||||||||||||||||||||| ||||
Sbjct: 572 acaagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggact 631
Query: 465 ggtacccgttgttgatggcgtcggagatgccggccacgacgccgatgatgttga 518
||| ||| |||||| |||||||||| |||||||| ||||||| || |||||
Sbjct: 632 cgtagccgctgttgagcgcgtcggagaacccggccaccacgccgacgaggttga 685
>gb|CB648833.1|CB648833 OSJNEb12G21.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb12G21 3', mRNA sequence
Length = 782
Score = 194 bits (98), Expect = 3e-047
Identities = 200/234 (85%)
Strand = Plus / Plus
Query: 285 cgatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacc 344
||||||| || |||||| |||||||||| |||||||||| |||||| ||||| || ||||
Sbjct: 389 cgatgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagacc 448
Query: 345 agatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggt 404
| | ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||
Sbjct: 449 atagcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggt 508
Query: 405 agaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgact 464
| | ||| | ||| ||||| | ||||||||| | ||||||||||||||||||||| ||||
Sbjct: 509 acaagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggact 568
Query: 465 ggtacccgttgttgatggcgtcggagatgccggccacgacgccgatgatgttga 518
||||||| |||||| |||||||||| |||||||| ||||||| || |||||
Sbjct: 569 cgtacccgctgttgagcgcgtcggagaacccggccaccacgccgacgaggttga 622
>gb|CB650381.1|CB650381 OSJNEb14M17.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb14M17 3', mRNA sequence
Length = 807
Score = 194 bits (98), Expect = 3e-047
Identities = 200/234 (85%)
Strand = Plus / Plus
Query: 285 cgatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacc 344
||||||| || |||||| |||||||||| |||||||||| |||||| ||||| || ||||
Sbjct: 436 cgatgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagacc 495
Query: 345 agatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggt 404
||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||
Sbjct: 496 agagcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggt 555
Query: 405 agaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgact 464
| | ||| | ||| ||||| | ||||||||| | ||||||||||||||||||||| ||||
Sbjct: 556 acaagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggact 615
Query: 465 ggtacccgttgttgatggcgtcggagatgccggccacgacgccgatgatgttga 518
||| ||| |||||| |||||||||| |||||||| ||||||| || |||||
Sbjct: 616 cgtagccgctgttgagcgcgtcggagaacccggccaccacgccgacgaggttga 669
>dbj|AK100374.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084J22, full
insert sequence
Length = 2024
Score = 194 bits (98), Expect = 3e-047
Identities = 200/234 (85%)
Strand = Plus / Minus
Query: 285 cgatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacc 344
||||||| || |||||| |||||||||| |||||||||| |||||| ||||| || ||||
Sbjct: 1618 cgatgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagacc 1559
Query: 345 agatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggt 404
||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||
Sbjct: 1558 agagcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggt 1499
Query: 405 agaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgact 464
| | ||| | ||| ||||| | ||||||||| | ||||||||||||||||||||| ||||
Sbjct: 1498 acaagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggact 1439
Query: 465 ggtacccgttgttgatggcgtcggagatgccggccacgacgccgatgatgttga 518
||| ||| |||||| |||||||||| |||||||| ||||||| || |||||
Sbjct: 1438 cgtagccgctgttgagcgcgtcggagaacccggccaccacgccgacgaggttga 1385
>dbj|AK100475.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093O20, full
insert sequence
Length = 3462
Score = 194 bits (98), Expect = 3e-047
Identities = 200/234 (85%)
Strand = Plus / Minus
Query: 285 cgatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacc 344
||||||| || |||||| |||||||||| |||||||||| |||||| ||||| || ||||
Sbjct: 3052 cgatgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagacc 2993
Query: 345 agatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggt 404
||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||
Sbjct: 2992 agagcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggt 2933
Query: 405 agaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgact 464
| | ||| | ||| ||||| | ||||||||| | ||||||||||||||||||||| ||||
Sbjct: 2932 acaagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggact 2873
Query: 465 ggtacccgttgttgatggcgtcggagatgccggccacgacgccgatgatgttga 518
||| ||| |||||| |||||||||| |||||||| ||||||| || |||||
Sbjct: 2872 cgtagccgctgttgagcgcgtcggagaacccggccaccacgccgacgaggttga 2819
>dbj|AK105078.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-G07, full
insert sequence
Length = 1504
Score = 194 bits (98), Expect = 3e-047
Identities = 200/234 (85%)
Strand = Plus / Minus
Query: 285 cgatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacc 344
||||||| || |||||| |||||||||| |||||||||| |||||| ||||| || ||||
Sbjct: 1164 cgatgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagacc 1105
Query: 345 agatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggt 404
||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||
Sbjct: 1104 agagcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggt 1045
Query: 405 agaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgact 464
| | ||| | ||| ||||| | ||||||||| | ||||||||||||||||||||| ||||
Sbjct: 1044 acaagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggact 985
Query: 465 ggtacccgttgttgatggcgtcggagatgccggccacgacgccgatgatgttga 518
||| ||| |||||| |||||||||| |||||||| ||||||| || |||||
Sbjct: 984 cgtagccgctgttgagcgcgtcggagaacccggccaccacgccgacgaggttga 931
>gb|AACV01002349.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002349, whole
genome shotgun sequence
Length = 8745
Score = 194 bits (98), Expect = 3e-047
Identities = 200/234 (85%)
Strand = Plus / Minus
Query: 285 cgatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacc 344
||||||| || |||||| |||||||||| |||||||||| |||||| ||||| || ||||
Sbjct: 4150 cgatgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagacc 4091
Query: 345 agatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggt 404
||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||
Sbjct: 4090 agagcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggt 4031
Query: 405 agaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgact 464
| | ||| | ||| ||||| | ||||||||| | ||||||||||||||||||||| ||||
Sbjct: 4030 acaagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggact 3971
Query: 465 ggtacccgttgttgatggcgtcggagatgccggccacgacgccgatgatgttga 518
||| ||| |||||| |||||||||| |||||||| ||||||| || |||||
Sbjct: 3970 cgtagccgctgttgagcgcgtcggagaacccggccaccacgccgacgaggttga 3917
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 194 bits (98), Expect = 3e-047
Identities = 200/234 (85%)
Strand = Plus / Minus
Query: 285 cgatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacc 344
||||||| || |||||| |||||||||| |||||||||| |||||| ||||| || ||||
Sbjct: 31502188 cgatgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagacc 31502129
Query: 345 agatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggt 404
||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||
Sbjct: 31502128 agagcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggt 31502069
Query: 405 agaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgact 464
| | ||| | ||| ||||| | ||||||||| | ||||||||||||||||||||| ||||
Sbjct: 31502068 acaagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggact 31502009
Query: 465 ggtacccgttgttgatggcgtcggagatgccggccacgacgccgatgatgttga 518
||| ||| |||||| |||||||||| |||||||| ||||||| || |||||
Sbjct: 31502008 cgtagccgctgttgagcgcgtcggagaacccggccaccacgccgacgaggttga 31501955
>ref|NM_191233.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 2820
Score = 194 bits (98), Expect = 3e-047
Identities = 200/234 (85%)
Strand = Plus / Minus
Query: 285 cgatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacc 344
||||||| || |||||| |||||||||| |||||||||| |||||| ||||| || ||||
Sbjct: 2770 cgatgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagacc 2711
Query: 345 agatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggt 404
||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||
Sbjct: 2710 agagcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggt 2651
Query: 405 agaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgact 464
| | ||| | ||| ||||| | ||||||||| | ||||||||||||||||||||| ||||
Sbjct: 2650 acaagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggact 2591
Query: 465 ggtacccgttgttgatggcgtcggagatgccggccacgacgccgatgatgttga 518
||| ||| |||||| |||||||||| |||||||| ||||||| || |||||
Sbjct: 2590 cgtagccgctgttgagcgcgtcggagaacccggccaccacgccgacgaggttga 2537
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 194 bits (98), Expect = 3e-047
Identities = 200/234 (85%)
Strand = Plus / Minus
Query: 285 cgatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacc 344
||||||| || |||||| |||||||||| |||||||||| |||||| ||||| || ||||
Sbjct: 5949571 cgatgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagacc 5949512
Query: 345 agatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggt 404
||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||
Sbjct: 5949511 agagcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggt 5949452
Query: 405 agaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgact 464
| | ||| | ||| ||||| | ||||||||| | ||||||||||||||||||||| ||||
Sbjct: 5949451 acaagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggact 5949392
Query: 465 ggtacccgttgttgatggcgtcggagatgccggccacgacgccgatgatgttga 518
||| ||| |||||| |||||||||| |||||||| ||||||| || |||||
Sbjct: 5949391 cgtagccgctgttgagcgcgtcggagaacccggccaccacgccgacgaggttga 5949338
>dbj|AP003237.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0046E05
Length = 162776
Score = 194 bits (98), Expect = 3e-047
Identities = 200/234 (85%)
Strand = Plus / Minus
Query: 285 cgatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacc 344
||||||| || |||||| |||||||||| |||||||||| |||||| ||||| || ||||
Sbjct: 15582 cgatgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagacc 15523
Query: 345 agatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggt 404
||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||
Sbjct: 15522 agagcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggt 15463
Query: 405 agaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgact 464
| | ||| | ||| ||||| | ||||||||| | ||||||||||||||||||||| ||||
Sbjct: 15462 acaagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggact 15403
Query: 465 ggtacccgttgttgatggcgtcggagatgccggccacgacgccgatgatgttga 518
||| ||| |||||| |||||||||| |||||||| ||||||| || |||||
Sbjct: 15402 cgtagccgctgttgagcgcgtcggagaacccggccaccacgccgacgaggttga 15349
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 194 bits (98), Expect = 3e-047
Identities = 200/234 (85%)
Strand = Plus / Minus
Query: 285 cgatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacc 344
||||||| || |||||| |||||||||| |||||||||| |||||| ||||| || ||||
Sbjct: 5853294 cgatgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagacc 5853235
Query: 345 agatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggt 404
||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||
Sbjct: 5853234 agagcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggt 5853175
Query: 405 agaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgact 464
| | ||| | ||| ||||| | ||||||||| | ||||||||||||||||||||| ||||
Sbjct: 5853174 acaagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggact 5853115
Query: 465 ggtacccgttgttgatggcgtcggagatgccggccacgacgccgatgatgttga 518
||| ||| |||||| |||||||||| |||||||| ||||||| || |||||
Sbjct: 5853114 cgtagccgctgttgagcgcgtcggagaacccggccaccacgccgacgaggttga 5853061
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 194 bits (98), Expect = 3e-047
Identities = 200/234 (85%)
Strand = Plus / Minus
Query: 285 cgatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacc 344
||||||| || |||||| |||||||||| |||||||||| |||||| ||||| || ||||
Sbjct: 31055015 cgatgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagacc 31054956
Query: 345 agatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggt 404
||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||
Sbjct: 31054955 agagcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggt 31054896
Query: 405 agaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgact 464
| | ||| | ||| ||||| | ||||||||| | ||||||||||||||||||||| ||||
Sbjct: 31054895 acaagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggact 31054836
Query: 465 ggtacccgttgttgatggcgtcggagatgccggccacgacgccgatgatgttga 518
||| ||| |||||| |||||||||| |||||||| ||||||| || |||||
Sbjct: 31054835 cgtagccgctgttgagcgcgtcggagaacccggccaccacgccgacgaggttga 31054782
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 194 bits (98), Expect = 3e-047
Identities = 200/234 (85%)
Strand = Plus / Minus
Query: 285 cgatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacc 344
||||||| || |||||| |||||||||| |||||||||| |||||| ||||| || ||||
Sbjct: 31421518 cgatgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagacc 31421459
Query: 345 agatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggt 404
||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||
Sbjct: 31421458 agagcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggt 31421399
Query: 405 agaggtggacgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgact 464
| | ||| | ||| ||||| | ||||||||| | ||||||||||||||||||||| ||||
Sbjct: 31421398 acaagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggact 31421339
Query: 465 ggtacccgttgttgatggcgtcggagatgccggccacgacgccgatgatgttga 518
||| ||| |||||| |||||||||| |||||||| ||||||| || |||||
Sbjct: 31421338 cgtagccgctgttgagcgcgtcggagaacccggccaccacgccgacgaggttga 31421285
>gb|CB646550.1|CB646550 OSJNEb09B15.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb09B15 3', mRNA sequence
Length = 575
Score = 165 bits (83), Expect = 3e-038
Identities = 236/287 (82%)
Strand = Plus / Plus
Query: 237 ctcagcagttgatgccacactgcctgacgtcgggccccttggtcctgacgatgaagggat 296
|||| ||||||||||| |||||||||||||| || ||| ||| | ||| | ||||||||
Sbjct: 201 ctcaacagttgatgccccactgcctgacgtcagggcccctggccttgatggggaagggat 260
Query: 297 cgatcctgacccagagcagggagaagatggaggccagcagcacggaccagatgacgacaa 356
| |||||||||| | || ||| || |||||||| |||||||||||||| ||||| ||||
Sbjct: 261 caatcctgaccccaaacaaggaaaaaatggaggcgagcagcacggaccaaatgacaacaa 320
Query: 357 tggtgggcgtccggttctggcgccccatgagccccttgaggaacgggtagaggtggacga 416
||| ||||||||||||||| | |||||||| |||||||||||| ||||| ||| |||| |
Sbjct: 321 tggggggcgtccggttctgcctccccatgaaccccttgaggaaggggtaaagggggacca 380
Query: 417 tgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccgttgt 476
|||||| |||| ||| || | ||| ||||| | |||||||||| || | |||||||
Sbjct: 381 tgaccccaaaggggaaaaaaaacttcccgaaaaacgggccccacccctccgaaccgttgt 440
Query: 477 tgatggcgtcggagatgccggccacgacgccgatgatgttgatgatg 523
||||||||||||| | ||||| || || || |||||||||| ||||
Sbjct: 441 tgatggcgtcggaaaccccggcgaccacccccatgatgttgaggatg 487
>gb|CB636280.1|CB636280 OSJNEa01J02.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa01J02 3', mRNA sequence
Length = 611
Score = 111 bits (56), Expect = 4e-022
Identities = 119/140 (85%)
Strand = Plus / Plus
Query: 353 acaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggtagaggtgg 412
|||||||| || || |||||||| || |||||||| ||||| ||||| ||||| ||||||
Sbjct: 385 acaatggtcggtgtacggttctgccgacccatgagacccttaaggaaggggtacaggtgg 444
Query: 413 acgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccg 472
|| || ||||||||||| ||||||||||| || |||||||| ||||| |||||||| ||
Sbjct: 445 acaatcacccagaaggcaaagaagagcttcccaaagagcggaccccatgactggtagcca 504
Query: 473 ttgttgatggcgtcggagat 492
||||||| |||| ||||||
Sbjct: 505 ctgttgatagcgtaggagat 524
>gb|D24979.1|D24979 RICR2879A Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2879_1A, mRNA sequence
Length = 428
Score = 111 bits (56), Expect = 4e-022
Identities = 108/125 (86%), Gaps = 1/125 (0%)
Strand = Plus / Plus
Query: 286 gatgaagggatcgatcctgacccagagcagggagaagatggaggccagcagcacggacca 345
||||||||| ||| |||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 305 gatgaaggggtcgntcctgacccagacgagggagaagatggaggcgaggaggntggacca 364
Query: 346 gatgacgacaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggta 405
|| ||| |||| |||||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 365 gagcacgncaattgtgggcgtccggttct-gcctcccatgagccccttgaggaaggggta 423
Query: 406 gaggt 410
|||||
Sbjct: 424 gaggt 428
>dbj|AK061688.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B05, full
insert sequence
Length = 1582
Score = 111 bits (56), Expect = 4e-022
Identities = 119/140 (85%)
Strand = Plus / Minus
Query: 353 acaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggtagaggtgg 412
|||||||| || || |||||||| || |||||||| ||||| ||||| ||||| ||||||
Sbjct: 1046 acaatggtcggtgtacggttctgccgacccatgagacccttaaggaaggggtacaggtgg 987
Query: 413 acgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccg 472
|| || ||||||||||| ||||||||||| || |||||||| ||||| |||||||| ||
Sbjct: 986 acaatcacccagaaggcaaagaagagcttcccaaagagcggaccccatgactggtagcca 927
Query: 473 ttgttgatggcgtcggagat 492
||||||| |||| ||||||
Sbjct: 926 ctgttgatagcgtaggagat 907
>dbj|AK069196.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003G18, full
insert sequence
Length = 4282
Score = 111 bits (56), Expect = 4e-022
Identities = 119/140 (85%)
Strand = Plus / Minus
Query: 353 acaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggtagaggtgg 412
|||||||| || || |||||||| || |||||||| ||||| ||||| ||||| ||||||
Sbjct: 3381 acaatggtcggtgtacggttctgccgacccatgagacccttaaggaaggggtacaggtgg 3322
Query: 413 acgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccg 472
|| || ||||||||||| ||||||||||| || |||||||| ||||| |||||||| ||
Sbjct: 3321 acaatcacccagaaggcaaagaagagcttcccaaagagcggaccccatgactggtagcca 3262
Query: 473 ttgttgatggcgtcggagat 492
||||||| |||| ||||||
Sbjct: 3261 ctgttgatagcgtaggagat 3242
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete
sequence
Length = 154555
Score = 111 bits (56), Expect = 4e-022
Identities = 119/140 (85%)
Strand = Plus / Minus
Query: 353 acaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggtagaggtgg 412
|||||||| || || |||||||| || |||||||| ||||| ||||| ||||| ||||||
Sbjct: 21121 acaatggtcggtgtacggttctgccgacccatgagacccttaaggaaggggtacaggtgg 21062
Query: 413 acgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccg 472
|| || ||||||||||| ||||||||||| || |||||||| ||||| |||||||| ||
Sbjct: 21061 acaatcacccagaaggcaaagaagagcttcccaaagagcggaccccatgactggtagcca 21002
Query: 473 ttgttgatggcgtcggagat 492
||||||| |||| ||||||
Sbjct: 21001 ctgttgatagcgtaggagat 20982
>gb|AC145384.2| Oryza sativa chromosome 3 BAC OSJNBa0060M17 genomic sequence,
complete sequence
Length = 41693
Score = 111 bits (56), Expect = 4e-022
Identities = 119/140 (85%)
Strand = Plus / Plus
Query: 353 acaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggtagaggtgg 412
|||||||| || || |||||||| || |||||||| ||||| ||||| ||||| ||||||
Sbjct: 6217 acaatggtcggtgtacggttctgccgacccatgagacccttaaggaaggggtacaggtgg 6276
Query: 413 acgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccg 472
|| || ||||||||||| ||||||||||| || |||||||| ||||| |||||||| ||
Sbjct: 6277 acaatcacccagaaggcaaagaagagcttcccaaagagcggaccccatgactggtagcca 6336
Query: 473 ttgttgatggcgtcggagat 492
||||||| |||| ||||||
Sbjct: 6337 ctgttgatagcgtaggagat 6356
>gb|AACV01008134.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg008134, whole
genome shotgun sequence
Length = 22039
Score = 111 bits (56), Expect = 4e-022
Identities = 119/140 (85%)
Strand = Plus / Minus
Query: 353 acaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggtagaggtgg 412
|||||||| || || |||||||| || |||||||| ||||| ||||| ||||| ||||||
Sbjct: 17684 acaatggtcggtgtacggttctgccgacccatgagacccttaaggaaggggtacaggtgg 17625
Query: 413 acgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccg 472
|| || ||||||||||| ||||||||||| || |||||||| ||||| |||||||| ||
Sbjct: 17624 acaatcacccagaaggcaaagaagagcttcccaaagagcggaccccatgactggtagcca 17565
Query: 473 ttgttgatggcgtcggagat 492
||||||| |||| ||||||
Sbjct: 17564 ctgttgatagcgtaggagat 17545
>ref|XM_470040.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3607
Score = 111 bits (56), Expect = 4e-022
Identities = 119/140 (85%)
Strand = Plus / Minus
Query: 353 acaatggtgggcgtccggttctggcgccccatgagccccttgaggaacgggtagaggtgg 412
|||||||| || || |||||||| || |||||||| ||||| ||||| ||||| ||||||
Sbjct: 3492 acaatggtcggtgtacggttctgccgacccatgagacccttaaggaaggggtacaggtgg 3433
Query: 413 acgatgacccagaaggcgaagaagagcttgccgaagagcgggccccacgactggtacccg 472
|| || ||||||||||| ||||||||||| || |||||||| ||||| |||||||| ||
Sbjct: 3432 acaatcacccagaaggcaaagaagagcttcccaaagagcggaccccatgactggtagcca 3373
Query: 473 ttgttgatggcgtcggagat 492
||||||| |||| ||||||
Sbjct: 3372 ctgttgatagcgtaggagat 3353
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 739,322
Number of Sequences: 438736
Number of extensions: 739322
Number of successful extensions: 17485
Number of sequences better than 0.5: 120
Number of HSP's better than 0.5 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 16463
Number of HSP's gapped (non-prelim): 999
length of query: 526
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 505
effective length of database: 2,791,206,460
effective search space: 1409559262300
effective search space used: 1409559262300
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)