BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBL17f07.xg.2.1
(657 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AU167017.1|AU167017 AU167017 Rice mature leaf Oryza sati... 64 1e-007
gb|CF307587.1|CF307587 ABF--01-B03.b1 ABF3-overexpressing t... 64 1e-007
gb|CF307607.1|CF307607 ABF--01-B15.b1 ABF3-overexpressing t... 64 1e-007
gb|CF307633.1|CF307633 ABF--01-C04.b1 ABF3-overexpressing t... 64 1e-007
gb|CF307892.1|CF307892 ABF--01-H21.b1 ABF3-overexpressing t... 64 1e-007
gb|CF308079.1|CF308079 ABF--01-M02.b1 ABF3-overexpressing t... 64 1e-007
gb|CF317363.1|CF317363 HD--07-A12.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317379.1|CF317379 HD--07-A22.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317392.1|CF317392 HD--07-B05.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317396.1|CF317396 HD--07-B07.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317400.1|CF317400 HD--07-B09.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317407.1|CF317407 HD--07-B13.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317456.1|CF317456 HD--07-C15.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317460.1|CF317460 HD--07-C17.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317474.1|CF317474 HD--07-C24.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317494.1|CF317494 HD--07-D10.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317512.1|CF317512 HD--07-D19.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317515.1|CF317515 HD--07-D21.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317517.1|CF317517 HD--07-D22.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317534.1|CF317534 HD--07-E07.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317558.1|CF317558 HD--07-E20.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317560.1|CF317560 HD--07-E21.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317576.1|CF317576 HD--07-F05.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317584.1|CF317584 HD--07-F09.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317609.1|CF317609 HD--07-F23.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317619.1|CF317619 HD--07-G04.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317673.1|CF317673 HD--07-H07.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317759.1|CF317759 HD--07-J03.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317770.1|CF317770 HD--07-J09.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317826.1|CF317826 HD--07-K15.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317830.1|CF317830 HD--07-K17.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317834.1|CF317834 HD--07-K19.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317846.1|CF317846 HD--07-L01.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317854.1|CF317854 HD--07-L05.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317860.1|CF317860 HD--07-L08.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317902.1|CF317902 HD--07-M07.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317923.1|CF317923 HD--07-M18.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317931.1|CF317931 HD--07-M22.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317935.1|CF317935 HD--07-M24.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF317990.1|CF317990 HD--07-O07.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF318010.1|CF318010 HD--07-O17.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF318020.1|CF318020 HD--07-O22.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF318022.1|CF318022 HD--07-O23.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF318028.1|CF318028 HD--07-P02.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF318054.1|CF318054 HD--07-P16.b1 OsHDAC1-overexpressing... 64 1e-007
gb|CF334179.1|CF334179 JMT--03-F23.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF334355.1|CF334355 JMT--03-J23.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF335816.1|CF335816 JMT--05-K09.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF335924.1|CF335924 JMT--05-M17.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF336212.1|CF336212 JMT--06-D01.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF336222.1|CF336222 JMT--06-D06.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF336236.1|CF336236 JMT--06-D13.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF336310.1|CF336310 JMT--06-F03.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF336322.1|CF336322 JMT--06-F09.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF336340.1|CF336340 JMT--06-F18.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF336459.1|CF336459 JMT--06-I10.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF336500.1|CF336500 JMT--06-J08.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF336579.1|CF336579 JMT--06-L02.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF336607.1|CF336607 JMT--06-L16.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF336685.1|CF336685 JMT--06-N09.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF336693.1|CF336693 JMT--06-N13.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF337548.1|CF337548 JMT--08-A13.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF337557.1|CF337557 JMT--08-A18.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF337565.1|CF337565 JMT--08-B01.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF337576.1|CF337576 JMT--08-B09.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF337587.1|CF337587 JMT--08-B15.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF337687.1|CF337687 JMT--08-D22.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF337693.1|CF337693 JMT--08-E01.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF337744.1|CF337744 JMT--08-F04.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF337756.1|CF337756 JMT--08-F10.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF337764.1|CF337764 JMT--08-F14.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF337772.1|CF337772 JMT--08-F18.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF337838.1|CF337838 JMT--08-H06.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF337901.1|CF337901 JMT--08-I16.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF337904.1|CF337904 JMT--08-I18.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF337930.1|CF337930 JMT--08-J08.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF337938.1|CF337938 JMT--08-J12.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF337968.1|CF337968 JMT--08-K04.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF337972.1|CF337972 JMT--08-K06.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF337976.1|CF337976 JMT--08-K08.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF338000.1|CF338000 JMT--08-K22.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF338032.1|CF338032 JMT--08-L14.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF338082.1|CF338082 JMT--08-M18.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF338147.1|CF338147 JMT--08-O06.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF338151.1|CF338151 JMT--08-O08.b1 AtJMT-overexpressing ... 64 1e-007
gb|CF338183.1|CF338183 JMT--08-P01.b1 AtJMT-overexpressing ... 64 1e-007
gb|BP184498.1|BP184498 BP184498 pNS rice panicle cDNA, flow... 64 1e-007
dbj|AK070415.1| Oryza sativa (japonica cultivar-group) cDNA... 64 1e-007
dbj|AP004040.3| Oryza sativa (japonica cultivar-group) geno... 64 1e-007
gb|AACV01005302.1| Oryza sativa (japonica cultivar-group) c... 64 1e-007
ref|XM_467504.1| Oryza sativa (japonica cultivar-group), mRNA 64 1e-007
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 64 1e-007
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 64 1e-007
gb|CF318006.1|CF318006 HD--07-O15.b1 OsHDAC1-overexpressing... 58 6e-006
gb|CF336240.1|CF336240 JMT--06-D15.b1 AtJMT-overexpressing ... 58 6e-006
gb|CF317986.1|CF317986 HD--07-O05.b1 OsHDAC1-overexpressing... 56 2e-005
gb|CF318018.1|CF318018 HD--07-O21.b1 OsHDAC1-overexpressing... 56 2e-005
dbj|AP004862.3| Oryza sativa (japonica cultivar-group) geno... 52 4e-004
gb|AACV01013393.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 52 4e-004
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 52 4e-004
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 52 4e-004
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 52 4e-004
gb|AU182394.1|AU182394 AU182394 Rice panicle at flowering s... 50 0.002
gb|CF336613.1|CF336613 JMT--06-L19.b1 AtJMT-overexpressing ... 48 0.006
gb|BP184551.1|BP184551 BP184551 pNS rice panicle cDNA, flow... 48 0.006
gb|CF317492.1|CF317492 HD--07-D09.b1 OsHDAC1-overexpressing... 46 0.024
gb|AU032503.1|AU032503 AU032503 Rice green shoot Oryza sati... 44 0.094
gb|AACV01013395.1| Oryza sativa (japonica cultivar-group) c... 44 0.094
gb|CZ557677.1|CZ557677 M0035664 AS_TRIM_TDNA_B1 Oryza sativ... 42 0.37
dbj|AK070156.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.37
dbj|AK110936.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.37
gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbar... 42 0.37
ref|NT_107115.1| Oryza sativa (japonica cultivar-group) 42 0.37
gb|AACV01006309.1| Oryza sativa (japonica cultivar-group) c... 42 0.37
gb|AACV01006379.1| Oryza sativa (japonica cultivar-group) c... 42 0.37
gb|AACV01013396.1| Oryza sativa (japonica cultivar-group) c... 42 0.37
gb|AACV01013936.1| Oryza sativa (japonica cultivar-group) c... 42 0.37
ref|XM_474247.1| Oryza sativa (japonica cultivar-group), p... 42 0.37
ref|NT_107201.1| Oryza sativa (japonica cultivar-group) 42 0.37
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 42 0.37
gb|CH401213.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.37
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.37
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.37
emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromoso... 42 0.37
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 42 0.37
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 42 0.37
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 42 0.37
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.37
gb|AC145364.2| Oryza sativa (japonica cultivar-group) chrom... 42 0.37
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.37
>gb|AU167017.1|AU167017 AU167017 Rice mature leaf Oryza sativa (japonica cultivar-group)
cDNA clone S20748, mRNA sequence
Length = 452
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 408 cagttcttcctcaacgacctccccggcaacgacttcaacc 447
>gb|CF307587.1|CF307587 ABF--01-B03.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--01-B03, mRNA sequence
Length = 503
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 417 cagttcttcctcaacgacctccccggcaacgacttcaacc 456
>gb|CF307607.1|CF307607 ABF--01-B15.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--01-B15, mRNA sequence
Length = 641
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 417 cagttcttcctcaacgacctccccggcaacgacttcaacc 456
>gb|CF307633.1|CF307633 ABF--01-C04.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--01-C04, mRNA sequence
Length = 502
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 420 cagttcttcctcaacgacctccccggcaacgacttcaacc 459
>gb|CF307892.1|CF307892 ABF--01-H21.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--01-H21, mRNA sequence
Length = 574
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 417 cagttcttcctcaacgacctccccggcaacgacttcaacc 456
>gb|CF308079.1|CF308079 ABF--01-M02.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--01-M02, mRNA sequence
Length = 602
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 420 cagttcttcctcaacgacctccccggcaacgacttcaacc 459
>gb|CF317363.1|CF317363 HD--07-A12.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-A12, mRNA sequence
Length = 594
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 418 cagttcttcctcaacgacctccccggcaacgacttcaacc 457
>gb|CF317379.1|CF317379 HD--07-A22.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-A22, mRNA sequence
Length = 539
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 418 cagttcttcctcaacgacctccccggcaacgacttcaacc 457
>gb|CF317392.1|CF317392 HD--07-B05.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-B05, mRNA sequence
Length = 499
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 419 cagttcttcctcaacgacctccccggcaacgacttcaacc 458
>gb|CF317396.1|CF317396 HD--07-B07.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-B07, mRNA sequence
Length = 501
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 419 cagttcttcctcaacgacctccccggcaacgacttcaacc 458
>gb|CF317400.1|CF317400 HD--07-B09.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-B09, mRNA sequence
Length = 503
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 422 cagttcttcctcaacgacctccccggcaacgacttcaacc 461
>gb|CF317407.1|CF317407 HD--07-B13.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-B13, mRNA sequence
Length = 508
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 422 cagttcttcctcaacgacctccccggcaacgacttcaacc 461
>gb|CF317456.1|CF317456 HD--07-C15.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-C15, mRNA sequence
Length = 541
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 418 cagttcttcctcaacgacctccccggcaacgacttcaacc 457
>gb|CF317460.1|CF317460 HD--07-C17.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-C17, mRNA sequence
Length = 567
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 417 cagttcttcctcaacgacctccccggcaacgacttcaacc 456
>gb|CF317474.1|CF317474 HD--07-C24.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-C24, mRNA sequence
Length = 501
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 419 cagttcttcctcaacgacctccccggcaacgacttcaacc 458
>gb|CF317494.1|CF317494 HD--07-D10.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-D10, mRNA sequence
Length = 493
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 420 cagttcttcctcaacgacctccccggcaacgacttcaacc 459
>gb|CF317512.1|CF317512 HD--07-D19.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-D19, mRNA sequence
Length = 533
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 418 cagttcttcctcaacgacctccccggcaacgacttcaacc 457
>gb|CF317515.1|CF317515 HD--07-D21.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-D21, mRNA sequence
Length = 504
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 421 cagttcttcctcaacgacctccccggcaacgacttcaacc 460
>gb|CF317517.1|CF317517 HD--07-D22.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-D22, mRNA sequence
Length = 502
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 420 cagttcttcctcaacgacctccccggcaacgacttcaacc 459
>gb|CF317534.1|CF317534 HD--07-E07.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-E07, mRNA sequence
Length = 513
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 419 cagttcttcctcaacgacctccccggcaacgacttcaacc 458
>gb|CF317558.1|CF317558 HD--07-E20.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-E20, mRNA sequence
Length = 576
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 419 cagttcttcctcaacgacctccccggcaacgacttcaacc 458
>gb|CF317560.1|CF317560 HD--07-E21.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-E21, mRNA sequence
Length = 502
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 419 cagttcttcctcaacgacctccccggcaacgacttcaacc 458
>gb|CF317576.1|CF317576 HD--07-F05.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-F05, mRNA sequence
Length = 625
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 418 cagttcttcctcaacgacctccccggcaacgacttcaacc 457
>gb|CF317584.1|CF317584 HD--07-F09.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-F09, mRNA sequence
Length = 577
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 417 cagttcttcctcaacgacctccccggcaacgacttcaacc 456
>gb|CF317609.1|CF317609 HD--07-F23.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-F23, mRNA sequence
Length = 537
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 419 cagttcttcctcaacgacctccccggcaacgacttcaacc 458
>gb|CF317619.1|CF317619 HD--07-G04.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-G04, mRNA sequence
Length = 509
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 420 cagttcttcctcaacgacctccccggcaacgacttcaacc 459
>gb|CF317673.1|CF317673 HD--07-H07.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-H07, mRNA sequence
Length = 503
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 420 cagttcttcctcaacgacctccccggcaacgacttcaacc 459
>gb|CF317759.1|CF317759 HD--07-J03.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-J03, mRNA sequence
Length = 495
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 421 cagttcttcctcaacgacctccccggcaacgacttcaacc 460
>gb|CF317770.1|CF317770 HD--07-J09.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-J09, mRNA sequence
Length = 479
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 416 cagttcttcctcaacgacctccccggcaacgacttcaacc 455
>gb|CF317826.1|CF317826 HD--07-K15.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-K15, mRNA sequence
Length = 538
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 437 cagttcttcctcaacgacctccccggcaacgacttcaacc 476
>gb|CF317830.1|CF317830 HD--07-K17.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-K17, mRNA sequence
Length = 498
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 419 cagttcttcctcaacgacctccccggcaacgacttcaacc 458
>gb|CF317834.1|CF317834 HD--07-K19.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-K19, mRNA sequence
Length = 496
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 417 cagttcttcctcaacgacctccccggcaacgacttcaacc 456
>gb|CF317846.1|CF317846 HD--07-L01.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-L01, mRNA sequence
Length = 503
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 420 cagttcttcctcaacgacctccccggcaacgacttcaacc 459
>gb|CF317854.1|CF317854 HD--07-L05.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-L05, mRNA sequence
Length = 644
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 435 cagttcttcctcaacgacctccccggcaacgacttcaacc 474
>gb|CF317860.1|CF317860 HD--07-L08.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-L08, mRNA sequence
Length = 510
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 418 cagttcttcctcaacgacctccccggcaacgacttcaacc 457
>gb|CF317902.1|CF317902 HD--07-M07.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-M07, mRNA sequence
Length = 610
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 420 cagttcttcctcaacgacctccccggcaacgacttcaacc 459
>gb|CF317923.1|CF317923 HD--07-M18.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-M18, mRNA sequence
Length = 502
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 418 cagttcttcctcaacgacctccccggcaacgacttcaacc 457
>gb|CF317931.1|CF317931 HD--07-M22.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-M22, mRNA sequence
Length = 501
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 420 cagttcttcctcaacgacctccccggcaacgacttcaacc 459
>gb|CF317935.1|CF317935 HD--07-M24.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-M24, mRNA sequence
Length = 533
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 420 cagttcttcctcaacgacctccccggcaacgacttcaacc 459
>gb|CF317990.1|CF317990 HD--07-O07.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-O07, mRNA sequence
Length = 500
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 418 cagttcttcctcaacgacctccccggcaacgacttcaacc 457
>gb|CF318010.1|CF318010 HD--07-O17.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-O17, mRNA sequence
Length = 518
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 418 cagttcttcctcaacgacctccccggcaacgacttcaacc 457
>gb|CF318020.1|CF318020 HD--07-O22.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-O22, mRNA sequence
Length = 537
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 419 cagttcttcctcaacgacctccccggcaacgacttcaacc 458
>gb|CF318022.1|CF318022 HD--07-O23.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-O23, mRNA sequence
Length = 562
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 420 cagttcttcctcaacgacctccccggcaacgacttcaacc 459
>gb|CF318028.1|CF318028 HD--07-P02.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-P02, mRNA sequence
Length = 563
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 420 cagttcttcctcaacgacctccccggcaacgacttcaacc 459
>gb|CF318054.1|CF318054 HD--07-P16.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-P16, mRNA sequence
Length = 500
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 419 cagttcttcctcaacgacctccccggcaacgacttcaacc 458
>gb|CF334179.1|CF334179 JMT--03-F23.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--03-F23, mRNA sequence
Length = 512
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 394 cagttcttcctcaacgacctccccggcaacgacttcaacc 433
>gb|CF334355.1|CF334355 JMT--03-J23.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--03-J23, mRNA sequence
Length = 653
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 443 cagttcttcctcaacgacctccccggcaacgacttcaacc 482
>gb|CF335816.1|CF335816 JMT--05-K09.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--05-K09, mRNA sequence
Length = 557
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 426 cagttcttcctcaacgacctccccggcaacgacttcaacc 465
>gb|CF335924.1|CF335924 JMT--05-M17.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--05-M17, mRNA sequence
Length = 704
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 442 cagttcttcctcaacgacctccccggcaacgacttcaacc 481
>gb|CF336212.1|CF336212 JMT--06-D01.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--06-D01, mRNA sequence
Length = 500
Score = 63.9 bits (32), Expect = 1e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 372 cagttcgtcctgaacgacctccccggcaacgacttcaacc 411
|||||| |||| ||||||||||||||||||||||||||||
Sbjct: 418 cagttcttcctcaacgacctccccggcaacgacttcaacc 457
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,211,895
Number of Sequences: 438736
Number of extensions: 1211895
Number of successful extensions: 46988
Number of sequences better than 0.5: 133
Number of HSP's better than 0.5 without gapping: 134
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 45205
Number of HSP's gapped (non-prelim): 1783
length of query: 657
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 636
effective length of database: 2,791,206,460
effective search space: 1775207308560
effective search space used: 1775207308560
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)