BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBH4g04.xg.3.1
(1549 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK099353.1| Oryza sativa (japonica cultivar-group) cDNA... 1074 0.0
ref|XM_479756.1| Oryza sativa (japonica cultivar-group), mRNA 1074 0.0
ref|XM_507097.1| PREDICTED Oryza sativa (japonica cultivar-... 1074 0.0
dbj|AK070120.1| Oryza sativa (japonica cultivar-group) cDNA... 1066 0.0
dbj|AB110164.1| Oryza sativa (japonica cultivar-group) mRNA... 1066 0.0
dbj|AK061391.1| Oryza sativa (japonica cultivar-group) cDNA... 880 0.0
dbj|AP004566.3| Oryza sativa (japonica cultivar-group) geno... 712 0.0
gb|AACV01017126.1| Oryza sativa (japonica cultivar-group) c... 712 0.0
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 712 0.0
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 712 0.0
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 712 0.0
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 712 0.0
gb|BP184577.1|BP184577 BP184577 pNS rice panicle cDNA, flow... 702 0.0
gb|BP184860.1|BP184860 BP184860 pNS rice callus cDNA Oryza ... 676 0.0
gb|BP184651.1|BP184651 BP184651 pNS rice panicle cDNA, germ... 650 0.0
gb|BP184646.1|BP184646 BP184646 pNS rice panicle cDNA, germ... 630 e-178
emb|AX364142.1| Sequence 149 from Patent WO0208410 533 e-149
emb|AX364158.1| Sequence 165 from Patent WO0208410 533 e-149
emb|AX364129.1| Sequence 136 from Patent WO0208410 502 e-139
gb|BP184510.1|BP184510 BP184510 pNS rice panicle cDNA, germ... 416 e-113
gb|AU165750.1|AU165750 AU165750 Rice panicle at flowering s... 408 e-111
gb|AU197852.1|AU197852 AU197852 Rice green shoot Oryza sati... 394 e-107
gb|BP184346.1|BP184346 BP184346 pNS rice panicle cDNA, germ... 394 e-107
gb|AU184066.1|AU184066 AU184066 Rice root Oryza sativa (jap... 377 e-101
gb|D41441.1|D41441 RICS3945A Rice shoot Oryza sativa (japon... 355 5e-095
gb|AU029608.1|AU029608 AU029608 Rice panicle shorter than 3... 347 1e-092
gb|AU184057.1|AU184057 AU184057 Rice root Oryza sativa (jap... 337 1e-089
gb|AU063943.1|AU063943 AU063943 Rice panicle at flowering s... 323 2e-085
gb|AU166103.1|AU166103 AU166103 Rice panicle shorter than 3... 317 1e-083
gb|C91889.2|C91889 C91889 Rice cDNA from immature leaf incl... 311 6e-082
gb|AU032758.1|AU032758 AU032758 Rice green shoot Oryza sati... 301 6e-079
gb|AU095053.1|AU095053 AU095053 Rice immature leaf includin... 299 2e-078
gb|D46917.1|D46917 RICS11878A Rice green shoot Oryza sativa... 295 4e-077
gb|AU166083.1|AU166083 AU166083 Rice panicle shorter than 3... 289 2e-075
gb|AU166211.1|AU166211 AU166211 Rice immature leaf includin... 289 2e-075
gb|D24795.1|D24795 RICR2570A Rice root Oryza sativa (japoni... 285 4e-074
gb|D46630.1|D46630 RICS11421A Rice green shoot Oryza sativa... 281 6e-073
gb|D46942.1|D46942 RICS11919A Rice green shoot Oryza sativa... 281 6e-073
gb|D24809.1|D24809 RICR2590A Rice root Oryza sativa (japoni... 281 6e-073
gb|D41917.1|D41917 RICS4923A Rice shoot Oryza sativa (japon... 280 2e-072
gb|D47081.1|D47081 RICS12195A Rice green shoot Oryza sativa... 274 1e-070
gb|AU032285.1|AU032285 AU032285 Rice root Oryza sativa (jap... 274 1e-070
gb|AU097429.1|AU097429 AU097429 Rice shoot Oryza sativa (ja... 266 3e-068
gb|D41921.1|D41921 RICS4929A Rice shoot Oryza sativa (japon... 254 1e-064
gb|C73520.1|C73520 C73520 Rice panicle at flowering stage O... 242 5e-061
gb|D24237.1|D24237 RICR1565A Rice root Oryza sativa (japoni... 230 2e-057
gb|AU070143.1|AU070143 AU070143 Rice cDNA from immature lea... 194 1e-046
gb|AU064481.2|AU064481 AU064481 Rice panicle shorter than 3... 165 9e-038
gb|C25146.2|C25146 C25146 Rice shoot Oryza sativa (japonica... 133 3e-028
gb|D41344.1|D41344 RICS3811A Rice shoot Oryza sativa (japon... 131 1e-027
gb|AU066252.1|AU066252 AU066252 Rice shoot Oryza sativa (ja... 121 1e-024
gb|AU091380.1|AU091380 AU091380 Rice immature leaf includin... 101 1e-018
gb|AU030403.1|AU030403 AU030403 Rice cDNA from immature lea... 86 7e-014
gb|AU174298.1|AU174298 AU174298 Rice shoot Oryza sativa (ja... 82 1e-012
gb|AU029947.1|AU029947 AU029947 Rice cDNA from immature lea... 74 3e-010
gb|CB654574.1|CB654574 OSJNEc07D11.f OSJNEc Oryza sativa (j... 70 4e-009
gb|CB655050.1|CB655050 OSJNEc08B13.f OSJNEc Oryza sativa (j... 70 4e-009
gb|CB677301.1|CB677301 OSJNEe14B12.f OSJNEe Oryza sativa (j... 70 4e-009
gb|AU030287.2|AU030287 AU030287 Rice cDNA from immature lea... 70 4e-009
gb|BP184862.1|BP184862 BP184862 pNS rice callus cDNA Oryza ... 70 4e-009
dbj|AK060500.1| Oryza sativa (japonica cultivar-group) cDNA... 70 4e-009
dbj|AK120887.1| Oryza sativa (japonica cultivar-group) cDNA... 70 4e-009
dbj|AP003316.4| Oryza sativa (japonica cultivar-group) geno... 70 4e-009
gb|AACV01002841.1| Oryza sativa (japonica cultivar-group) c... 70 4e-009
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 70 4e-009
ref|NM_190249.1| Oryza sativa (japonica cultivar-group), p... 70 4e-009
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 70 4e-009
dbj|AP003407.3| Oryza sativa (japonica cultivar-group) geno... 70 4e-009
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 70 4e-009
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 70 4e-009
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 70 4e-009
gb|AU184774.1|AU184774 AU184774 Rice root Oryza sativa (jap... 58 1e-005
gb|AACV01025780.1| Oryza sativa (japonica cultivar-group) C... 58 1e-005
gb|AU029505.1|AU029505 AU029505 Rice panicle shorter than 3... 46 0.057
dbj|AP004042.1| Oryza sativa (japonica cultivar-group) chro... 46 0.057
dbj|AK063287.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.057
dbj|AP004708.3| Oryza sativa (japonica cultivar-group) geno... 46 0.057
dbj|AP004622.3| Oryza sativa (japonica cultivar-group) geno... 46 0.057
gb|AACV01018859.1| Oryza sativa (japonica cultivar-group) c... 46 0.057
gb|AACV01027182.1| Oryza sativa (japonica cultivar-group) C... 46 0.057
ref|XM_483354.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.057
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.057
gb|AACV01000451.1| Oryza sativa (japonica cultivar-group) c... 44 0.23
ref|NM_188466.1| Oryza sativa (japonica cultivar-group), Oz... 44 0.23
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 44 0.23
dbj|AP001633.2| Oryza sativa (japonica cultivar-group) geno... 44 0.23
dbj|AP002861.2| Oryza sativa (japonica cultivar-group) geno... 44 0.23
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.23
>dbj|AK099353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041J08, full
insert sequence
Length = 1315
Score = 1074 bits (542), Expect = 0.0
Identities = 845/946 (89%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 136 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 195
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 196 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 255
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 256 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 315
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcct 396
||||||||||||| ||||| ||||||||||| ||||| |||||| |||||||||||||
Sbjct: 316 gttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcggaggggtgcct 375
Query: 397 gttcgacaagcacgcgcggacggcgctggccttcgtgacgctcaagcacgacggggagcg 456
||||||| |||||||||| ||||||||||| |||||||| | || | |||| |||||
Sbjct: 376 gttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttgaaaagcaacggcgagcg 435
Query: 457 cgagttcatgttctacaggaacccgagcgcggacatgctgctgacggaggcggagctgga 516
|||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 436 cgagttcatgttctaccggaacccgagcgccgacatgctcctgacggaggcggagctcaa 495
Query: 517 cctgggcctggtgcggcgcgccagggtgttccactacggctccatctcgctcatctccga 576
||||| |||| | |||||||||| | | |||||||||||||||||||| |||||| ||||
Sbjct: 496 cctggacctgatccggcgcgccaagatcttccactacggctccatctccctcatcaccga 555
Query: 577 gccgtgccgctcggcgcacatggccgccatgcgcgcagccaaggccgcgggcgtgctctg 636
|||||||||||| || ||| | |||||||||||||| |||||| | || ||| | |||||
Sbjct: 556 gccgtgccgctccgcccacgtcgccgccatgcgcgccgccaagtcggccggcatcctctg 615
Query: 637 ctcctacgaccccaacgtgcgcctcccgctctggccgtcgcccgacgccgcacgcgaggg 696
|||||||||||||||||| |||||||||||||||||||| |||||||| |||| ||
Sbjct: 616 ctcctacgaccccaacgtccgcctcccgctctggccgtccgaggacgccgcccgcgccgg 675
Query: 697 catcctcagcatctggaaggaggccgacttcatcaaggtcagcgacgacgaggtggcctt 756
||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 676 catcctctccatctggaaggaggccgacttcatcaaggtgagcgacgacgaggtcgcctt 735
Query: 757 cctcacgcgcggggacgccaacgacgagaagaacgtgctgtccctgtggtttgacgggct 816
|||||| | || |||||||||||||||||||||||||| || || ||||| ||||| ||
Sbjct: 736 cctcacccagggcgacgccaacgacgagaagaacgtgctctcgctctggttcgacggcct 795
Query: 817 caagctgctcgtcgtcaccgacggggacaagggatgcaggtacttcaccaaggacttcaa 876
|||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 796 caagctcctcatcgtcaccgacggcgagaagggatgcaggtacttcaccaaggacttcaa 855
Query: 877 gggcagcgtgcccggcttcaaggtcgacaccgtcgacaccaccggcgccggcgacgcctt 936
|||| ||| ||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 856 gggctccgtccccggcttctccgtcaacaccgtcgacaccaccggcgccggcgacgcctt 915
Query: 937 cgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccacaacgaggagaa 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 cgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccacaacgaggagaa 975
Query: 997 gctccgcgaggctctcaagttctccaacgcctgcggcgccatctgcaccaccaagaaggg 1056
||| | ||||| ||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 976 gctgagggaggcgctcaagttctcgaacgcgtgcggagccatctgcaccaccaagaaggg 1035
Query: 1057 cgccatcccggcgctgcccacggtcgccaccgcccaggacctcatc 1102
|||||||||||||||||||| |||||| ||| ||||| ||||||
Sbjct: 1036 tgccatcccggcgctgcccaccgtcgccgtcgcgcaggagctcatc 1081
>ref|XM_479756.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1314
Score = 1074 bits (542), Expect = 0.0
Identities = 845/946 (89%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 136 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 195
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 196 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 255
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 256 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 315
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcct 396
||||||||||||| ||||| ||||||||||| ||||| |||||| |||||||||||||
Sbjct: 316 gttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcggaggggtgcct 375
Query: 397 gttcgacaagcacgcgcggacggcgctggccttcgtgacgctcaagcacgacggggagcg 456
||||||| |||||||||| ||||||||||| |||||||| | || | |||| |||||
Sbjct: 376 gttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttgaaaagcaacggcgagcg 435
Query: 457 cgagttcatgttctacaggaacccgagcgcggacatgctgctgacggaggcggagctgga 516
|||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 436 cgagttcatgttctaccggaacccgagcgccgacatgctcctgacggaggcggagctcaa 495
Query: 517 cctgggcctggtgcggcgcgccagggtgttccactacggctccatctcgctcatctccga 576
||||| |||| | |||||||||| | | |||||||||||||||||||| |||||| ||||
Sbjct: 496 cctggacctgatccggcgcgccaagatcttccactacggctccatctccctcatcaccga 555
Query: 577 gccgtgccgctcggcgcacatggccgccatgcgcgcagccaaggccgcgggcgtgctctg 636
|||||||||||| || ||| | |||||||||||||| |||||| | || ||| | |||||
Sbjct: 556 gccgtgccgctccgcccacgtcgccgccatgcgcgccgccaagtcggccggcatcctctg 615
Query: 637 ctcctacgaccccaacgtgcgcctcccgctctggccgtcgcccgacgccgcacgcgaggg 696
|||||||||||||||||| |||||||||||||||||||| |||||||| |||| ||
Sbjct: 616 ctcctacgaccccaacgtccgcctcccgctctggccgtccgaggacgccgcccgcgccgg 675
Query: 697 catcctcagcatctggaaggaggccgacttcatcaaggtcagcgacgacgaggtggcctt 756
||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 676 catcctctccatctggaaggaggccgacttcatcaaggtgagcgacgacgaggtcgcctt 735
Query: 757 cctcacgcgcggggacgccaacgacgagaagaacgtgctgtccctgtggtttgacgggct 816
|||||| | || |||||||||||||||||||||||||| || || ||||| ||||| ||
Sbjct: 736 cctcacccagggcgacgccaacgacgagaagaacgtgctctcgctctggttcgacggcct 795
Query: 817 caagctgctcgtcgtcaccgacggggacaagggatgcaggtacttcaccaaggacttcaa 876
|||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 796 caagctcctcatcgtcaccgacggcgagaagggatgcaggtacttcaccaaggacttcaa 855
Query: 877 gggcagcgtgcccggcttcaaggtcgacaccgtcgacaccaccggcgccggcgacgcctt 936
|||| ||| ||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 856 gggctccgtccccggcttctccgtcaacaccgtcgacaccaccggcgccggcgacgcctt 915
Query: 937 cgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccacaacgaggagaa 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 cgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccacaacgaggagaa 975
Query: 997 gctccgcgaggctctcaagttctccaacgcctgcggcgccatctgcaccaccaagaaggg 1056
||| | ||||| ||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 976 gctgagggaggcgctcaagttctcgaacgcgtgcggagccatctgcaccaccaagaaggg 1035
Query: 1057 cgccatcccggcgctgcccacggtcgccaccgcccaggacctcatc 1102
|||||||||||||||||||| |||||| ||| ||||| ||||||
Sbjct: 1036 tgccatcccggcgctgcccaccgtcgccgtcgcgcaggagctcatc 1081
>ref|XM_507097.1| PREDICTED Oryza sativa (japonica cultivar-group), P0498H04.29 mRNA
Length = 1422
Score = 1074 bits (542), Expect = 0.0
Identities = 845/946 (89%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 136 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 195
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 196 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 255
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 256 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 315
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcct 396
||||||||||||| ||||| ||||||||||| ||||| |||||| |||||||||||||
Sbjct: 316 gttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcggaggggtgcct 375
Query: 397 gttcgacaagcacgcgcggacggcgctggccttcgtgacgctcaagcacgacggggagcg 456
||||||| |||||||||| ||||||||||| |||||||| | || | |||| |||||
Sbjct: 376 gttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttgaaaagcaacggcgagcg 435
Query: 457 cgagttcatgttctacaggaacccgagcgcggacatgctgctgacggaggcggagctgga 516
|||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 436 cgagttcatgttctaccggaacccgagcgccgacatgctcctgacggaggcggagctcaa 495
Query: 517 cctgggcctggtgcggcgcgccagggtgttccactacggctccatctcgctcatctccga 576
||||| |||| | |||||||||| | | |||||||||||||||||||| |||||| ||||
Sbjct: 496 cctggacctgatccggcgcgccaagatcttccactacggctccatctccctcatcaccga 555
Query: 577 gccgtgccgctcggcgcacatggccgccatgcgcgcagccaaggccgcgggcgtgctctg 636
|||||||||||| || ||| | |||||||||||||| |||||| | || ||| | |||||
Sbjct: 556 gccgtgccgctccgcccacgtcgccgccatgcgcgccgccaagtcggccggcatcctctg 615
Query: 637 ctcctacgaccccaacgtgcgcctcccgctctggccgtcgcccgacgccgcacgcgaggg 696
|||||||||||||||||| |||||||||||||||||||| |||||||| |||| ||
Sbjct: 616 ctcctacgaccccaacgtccgcctcccgctctggccgtccgaggacgccgcccgcgccgg 675
Query: 697 catcctcagcatctggaaggaggccgacttcatcaaggtcagcgacgacgaggtggcctt 756
||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 676 catcctctccatctggaaggaggccgacttcatcaaggtgagcgacgacgaggtcgcctt 735
Query: 757 cctcacgcgcggggacgccaacgacgagaagaacgtgctgtccctgtggtttgacgggct 816
|||||| | || |||||||||||||||||||||||||| || || ||||| ||||| ||
Sbjct: 736 cctcacccagggcgacgccaacgacgagaagaacgtgctctcgctctggttcgacggcct 795
Query: 817 caagctgctcgtcgtcaccgacggggacaagggatgcaggtacttcaccaaggacttcaa 876
|||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 796 caagctcctcatcgtcaccgacggcgagaagggatgcaggtacttcaccaaggacttcaa 855
Query: 877 gggcagcgtgcccggcttcaaggtcgacaccgtcgacaccaccggcgccggcgacgcctt 936
|||| ||| ||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 856 gggctccgtccccggcttctccgtcaacaccgtcgacaccaccggcgccggcgacgcctt 915
Query: 937 cgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccacaacgaggagaa 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 cgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccacaacgaggagaa 975
Query: 997 gctccgcgaggctctcaagttctccaacgcctgcggcgccatctgcaccaccaagaaggg 1056
||| | ||||| ||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 976 gctgagggaggcgctcaagttctcgaacgcgtgcggagccatctgcaccaccaagaaggg 1035
Query: 1057 cgccatcccggcgctgcccacggtcgccaccgcccaggacctcatc 1102
|||||||||||||||||||| |||||| ||| ||||| ||||||
Sbjct: 1036 tgccatcccggcgctgcccaccgtcgccgtcgcgcaggagctcatc 1081
>dbj|AK070120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041C07, full
insert sequence
Length = 1422
Score = 1067 bits (538), Expect = 0.0
Identities = 844/946 (89%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 136 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 195
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 196 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 255
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 256 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 315
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcct 396
||||||||||||| ||||| ||||||||||| ||||| |||||| |||||||||||||
Sbjct: 316 gttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcggaggggtgcct 375
Query: 397 gttcgacaagcacgcgcggacggcgctggccttcgtgacgctcaagcacgacggggagcg 456
||||||| |||||||||| ||||||||||| |||||||| | || | |||| |||||
Sbjct: 376 gttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttgaaaagcaacggcgagcg 435
Query: 457 cgagttcatgttctacaggaacccgagcgcggacatgctgctgacggaggcggagctgga 516
|||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 436 cgagttcatgttctaccggaacccgagcgccgacatgctcctgacggaggcggagctcaa 495
Query: 517 cctgggcctggtgcggcgcgccagggtgttccactacggctccatctcgctcatctccga 576
||||| |||| | |||||||||| | | |||||||||||||||||||| |||||| ||||
Sbjct: 496 cctggacctgatccggcgcgccaagatcttccactacggctccatctccctcatcaccga 555
Query: 577 gccgtgccgctcggcgcacatggccgccatgcgcgcagccaaggccgcgggcgtgctctg 636
|||||||||||| || ||| | |||||||||||||| |||||| | || ||| | |||||
Sbjct: 556 gccgtgccgctccgcccacgtcgccgccatgcgcgccgccaagtcggccggcatcctctg 615
Query: 637 ctcctacgaccccaacgtgcgcctcccgctctggccgtcgcccgacgccgcacgcgaggg 696
|||||||||||||||||| |||||||||||||||||||| |||||||| |||| ||
Sbjct: 616 ctcctacgaccccaacgtccgcctcccgctctggccgtccgaggacgccgcccgcgccgg 675
Query: 697 catcctcagcatctggaaggaggccgacttcatcaaggtcagcgacgacgaggtggcctt 756
||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 676 catcctctccatctggaaggaggccgacttcatcaaggtgagcgacgacgaggtcgcctt 735
Query: 757 cctcacgcgcggggacgccaacgacgagaagaacgtgctgtccctgtggtttgacgggct 816
|||||| | || |||||||||||||||||||||||||| || || ||||| ||||| ||
Sbjct: 736 cctcacccagggcgacgccaacgacgagaagaacgtgctctcgctctggttcgacggcct 795
Query: 817 caagctgctcgtcgtcaccgacggggacaagggatgcaggtacttcaccaaggacttcaa 876
|||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 796 caagctcctcatcgtcaccgacggcgagaagggatgcaggtacttcaccaaggacttcaa 855
Query: 877 gggcagcgtgcccggcttcaaggtcgacaccgtcgacaccaccggcgccggcgacgcctt 936
|||| ||| || |||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 856 gggctccgtcccgggcttctccgtcaacaccgtcgacaccaccggcgccggcgacgcctt 915
Query: 937 cgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccacaacgaggagaa 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 cgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccacaacgaggagaa 975
Query: 997 gctccgcgaggctctcaagttctccaacgcctgcggcgccatctgcaccaccaagaaggg 1056
||| | ||||| ||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 976 gctgagggaggcgctcaagttctcgaacgcgtgcggagccatctgcaccaccaagaaggg 1035
Query: 1057 cgccatcccggcgctgcccacggtcgccaccgcccaggacctcatc 1102
|||||||||||||||||||| |||||| ||| ||||| ||||||
Sbjct: 1036 tgccatcccggcgctgcccaccgtcgccgtcgcgcaggagctcatc 1081
>dbj|AB110164.1| Oryza sativa (japonica cultivar-group) mRNA for fructokinase,
complete cds, clone: 12FPB009
Length = 1239
Score = 1067 bits (538), Expect = 0.0
Identities = 844/946 (89%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 59 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 118
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 119 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 178
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 179 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 238
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcct 396
||||||||||||| ||||| ||||||||||| ||||| |||||| |||||||||||||
Sbjct: 239 gttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcggaggggtgcct 298
Query: 397 gttcgacaagcacgcgcggacggcgctggccttcgtgacgctcaagcacgacggggagcg 456
||||||| |||||||||| ||||||||||| |||||||| | || | |||| |||||
Sbjct: 299 gttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttgaaaagcaacggcgagcg 358
Query: 457 cgagttcatgttctacaggaacccgagcgcggacatgctgctgacggaggcggagctgga 516
|||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 359 cgagttcatgttctaccggaacccgagcgccgacatgctcctgacggaggcggagctcaa 418
Query: 517 cctgggcctggtgcggcgcgccagggtgttccactacggctccatctcgctcatctccga 576
||||| |||| | |||||||||| | | |||||||||||||||||||| |||||| ||||
Sbjct: 419 cctggacctgatccggcgcgccaagatcttccactacggctccatctccctcatcaccga 478
Query: 577 gccgtgccgctcggcgcacatggccgccatgcgcgcagccaaggccgcgggcgtgctctg 636
|||||||||||| || ||| | |||||||||||||| |||||| | || ||| | |||||
Sbjct: 479 gccgtgccgctccgcccacgtcgccgccatgcgcgccgccaagtcggccggcatcctctg 538
Query: 637 ctcctacgaccccaacgtgcgcctcccgctctggccgtcgcccgacgccgcacgcgaggg 696
|||||||||||||||||| |||||||||||||||||||| |||||||| |||| ||
Sbjct: 539 ctcctacgaccccaacgtccgcctcccgctctggccgtccgaggacgccgcccgcgccgg 598
Query: 697 catcctcagcatctggaaggaggccgacttcatcaaggtcagcgacgacgaggtggcctt 756
||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 599 catcctctccatctggaaggaggccgacttcatcaaggtgagcgacgacgaggtcgcctt 658
Query: 757 cctcacgcgcggggacgccaacgacgagaagaacgtgctgtccctgtggtttgacgggct 816
|||||| | || |||||||||||||||||||||||||| || || ||||| ||||| ||
Sbjct: 659 cctcacccagggcgacgccaacgacgagaagaacgtgctctcgctctggttcgacggcct 718
Query: 817 caagctgctcgtcgtcaccgacggggacaagggatgcaggtacttcaccaaggacttcaa 876
|||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 719 caagctcctcatcgtcaccgacggcgagaagggatgcaggtacttcaccaaggacttcaa 778
Query: 877 gggcagcgtgcccggcttcaaggtcgacaccgtcgacaccaccggcgccggcgacgcctt 936
|||| ||| || |||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 779 gggctccgtcccgggcttctccgtcaacaccgtcgacaccaccggcgccggcgacgcctt 838
Query: 937 cgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccacaacgaggagaa 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 cgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccacaacgaggagaa 898
Query: 997 gctccgcgaggctctcaagttctccaacgcctgcggcgccatctgcaccaccaagaaggg 1056
||| | ||||| ||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 899 gctgagggaggcgctcaagttctcgaacgcgtgcggagccatctgcaccaccaagaaggg 958
Query: 1057 cgccatcccggcgctgcccacggtcgccaccgcccaggacctcatc 1102
|||||||||||||||||||| |||||| ||| ||||| ||||||
Sbjct: 959 tgccatcccggcgctgcccaccgtcgccgtcgcgcaggagctcatc 1004
>dbj|AK061391.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-C10, full
insert sequence
Length = 1165
Score = 880 bits (444), Expect = 0.0
Identities = 720/812 (88%)
Strand = Plus / Plus
Query: 291 agctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgt 350
||||||| || ||||||||||||||||||||||| || || || |||||||||||||||
Sbjct: 1 agctcggtggctcctccgccttcgtcggcaagtttggtgatgatgagttcgggcacatgc 60
Query: 351 tggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacg 410
||||| ||||||||||| ||||| |||||| |||||||||||||||||||| ||||||
Sbjct: 61 tggtggacatcctgaagaagaacggggtgaacgcggaggggtgcctgttcgacgagcacg 120
Query: 411 cgcggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttct 470
|||| ||||||||||| |||||||| | || | |||| |||||||||||||||||||
Sbjct: 121 cgcgcacggcgctggcgttcgtgaccttgaaaagcaacggcgagcgcgagttcatgttct 180
Query: 471 acaggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgc 530
|| ||||||||||||| |||||||| ||||||||||||||||| |||||| |||| | |
Sbjct: 181 accggaacccgagcgccgacatgctcctgacggaggcggagctcaacctggacctgatcc 240
Query: 531 ggcgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcgg 590
||||||||| | | |||||||||||||||||||| |||||| |||||||||||||||| |
Sbjct: 241 ggcgcgccaagatcttccactacggctccatctccctcatcaccgagccgtgccgctccg 300
Query: 591 cgcacatggccgccatgcgcgcagccaaggccgcgggcgtgctctgctcctacgacccca 650
| ||| | |||||||||||||| |||||| | || ||| | |||||||||||||||||||
Sbjct: 301 cccacgtcgccgccatgcgcgccgccaagtcggccggcatcctctgctcctacgacccca 360
Query: 651 acgtgcgcctcccgctctggccgtcgcccgacgccgcacgcgagggcatcctcagcatct 710
|||| |||||||||||||||||||| |||||||| |||| ||||||||| |||||
Sbjct: 361 acgtccgcctcccgctctggccgtccgaggacgccgcccgcgccggcatcctctccatct 420
Query: 711 ggaaggaggccgacttcatcaaggtcagcgacgacgaggtggccttcctcacgcgcgggg 770
||||||||||||||||||||||||| |||||||||||||| ||||||||||| | || |
Sbjct: 421 ggaaggaggccgacttcatcaaggtgagcgacgacgaggtcgccttcctcacccagggcg 480
Query: 771 acgccaacgacgagaagaacgtgctgtccctgtggtttgacgggctcaagctgctcgtcg 830
||||||||||||||||||||||||| || || ||||| ||||| |||||||| ||| |||
Sbjct: 481 acgccaacgacgagaagaacgtgctctcgctctggttcgacggcctcaagctcctcatcg 540
Query: 831 tcaccgacggggacaagggatgcaggtacttcaccaaggacttcaagggcagcgtgcccg 890
|||||||||| || |||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 541 tcaccgacggcgagaagggatgcaggtacttcaccaaggacttcaagggctccgtccccg 600
Query: 891 gcttcaaggtcgacaccgtcgacaccaccggcgccggcgacgccttcgtcggctccctcc 950
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gcttctccgtcaacaccgtcgacaccaccggcgccggcgacgccttcgtcggctccctcc 660
Query: 951 tcgtcaacgtcgccaaggacgactccatcttccacaacgaggagaagctccgcgaggctc 1010
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |
Sbjct: 661 tcgtcaacgtcgccaaggacgactccatcttccacaacgaggagaagctgagggaggcgc 720
Query: 1011 tcaagttctccaacgcctgcggcgccatctgcaccaccaagaagggcgccatcccggcgc 1070
|||||||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 721 tcaagttctcgaacgcgtgcggagccatctgcaccaccaagaagggtgccatcccggcgc 780
Query: 1071 tgcccacggtcgccaccgcccaggacctcatc 1102
||||||| |||||| ||| ||||| ||||||
Sbjct: 781 tgcccaccgtcgccgtcgcgcaggagctcatc 812
>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0498H04
Length = 151046
Score = 712 bits (359), Expect = 0.0
Identities = 578/651 (88%)
Strand = Plus / Plus
Query: 335 gagttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgc 394
||||||||||||||| ||||| ||||||||||| ||||| |||||| |||||||||||
Sbjct: 123839 gagttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcggaggggtgc 123898
Query: 395 ctgttcgacaagcacgcgcggacggcgctggccttcgtgacgctcaagcacgacggggag 454
||||||||| |||||||||| ||||||||||| |||||||| | || | |||| |||
Sbjct: 123899 ctgttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttgaaaagcaacggcgag 123958
Query: 455 cgcgagttcatgttctacaggaacccgagcgcggacatgctgctgacggaggcggagctg 514
|||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||
Sbjct: 123959 cgcgagttcatgttctaccggaacccgagcgccgacatgctcctgacggaggcggagctc 124018
Query: 515 gacctgggcctggtgcggcgcgccagggtgttccactacggctccatctcgctcatctcc 574
|||||| |||| | |||||||||| | | |||||||||||||||||||| |||||| ||
Sbjct: 124019 aacctggacctgatccggcgcgccaagatcttccactacggctccatctccctcatcacc 124078
Query: 575 gagccgtgccgctcggcgcacatggccgccatgcgcgcagccaaggccgcgggcgtgctc 634
|||||||||||||| || ||| | |||||||||||||| |||||| | || ||| | |||
Sbjct: 124079 gagccgtgccgctccgcccacgtcgccgccatgcgcgccgccaagtcggccggcatcctc 124138
Query: 635 tgctcctacgaccccaacgtgcgcctcccgctctggccgtcgcccgacgccgcacgcgag 694
|||||||||||||||||||| |||||||||||||||||||| |||||||| ||||
Sbjct: 124139 tgctcctacgaccccaacgtccgcctcccgctctggccgtccgaggacgccgcccgcgcc 124198
Query: 695 ggcatcctcagcatctggaaggaggccgacttcatcaaggtcagcgacgacgaggtggcc 754
||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 124199 ggcatcctctccatctggaaggaggccgacttcatcaaggtgagcgacgacgaggtcgcc 124258
Query: 755 ttcctcacgcgcggggacgccaacgacgagaagaacgtgctgtccctgtggtttgacggg 814
|||||||| | || |||||||||||||||||||||||||| || || ||||| |||||
Sbjct: 124259 ttcctcacccagggcgacgccaacgacgagaagaacgtgctctcgctctggttcgacggc 124318
Query: 815 ctcaagctgctcgtcgtcaccgacggggacaagggatgcaggtacttcaccaaggacttc 874
|||||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 124319 ctcaagctcctcatcgtcaccgacggcgagaagggatgcaggtacttcaccaaggacttc 124378
Query: 875 aagggcagcgtgcccggcttcaaggtcgacaccgtcgacaccaccggcgccggcgacgcc 934
|||||| ||| ||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 124379 aagggctccgtccccggcttctccgtcaacaccgtcgacaccaccggcgccggcgacgcc 124438
Query: 935 ttcgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccac 985
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124439 ttcgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccac 124489
Score = 242 bits (122), Expect = 5e-061
Identities = 155/166 (93%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 122417 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 122476
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 122477 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 122536
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaag 322
|||||||||| |||||||||| || |||||||||||||||||||||
Sbjct: 122537 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaag 122582
Score = 129 bits (65), Expect = 5e-027
Identities = 104/117 (88%)
Strand = Plus / Plus
Query: 986 aacgaggagaagctccgcgaggctctcaagttctccaacgcctgcggcgccatctgcacc 1045
|||||||||||||| | ||||| ||||||||||| ||||| ||||| ||||||||||||
Sbjct: 124566 aacgaggagaagctgagggaggcgctcaagttctcgaacgcgtgcggagccatctgcacc 124625
Query: 1046 accaagaagggcgccatcccggcgctgcccacggtcgccaccgcccaggacctcatc 1102
||||||||||| |||||||||||||||||||| |||||| ||| ||||| ||||||
Sbjct: 124626 accaagaagggtgccatcccggcgctgcccaccgtcgccgtcgcgcaggagctcatc 124682
>gb|AACV01017126.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017126, whole
genome shotgun sequence
Length = 32319
Score = 712 bits (359), Expect = 0.0
Identities = 578/651 (88%)
Strand = Plus / Minus
Query: 335 gagttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgc 394
||||||||||||||| ||||| ||||||||||| ||||| |||||| |||||||||||
Sbjct: 21551 gagttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcggaggggtgc 21492
Query: 395 ctgttcgacaagcacgcgcggacggcgctggccttcgtgacgctcaagcacgacggggag 454
||||||||| |||||||||| ||||||||||| |||||||| | || | |||| |||
Sbjct: 21491 ctgttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttgaaaagcaacggcgag 21432
Query: 455 cgcgagttcatgttctacaggaacccgagcgcggacatgctgctgacggaggcggagctg 514
|||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||
Sbjct: 21431 cgcgagttcatgttctaccggaacccgagcgccgacatgctcctgacggaggcggagctc 21372
Query: 515 gacctgggcctggtgcggcgcgccagggtgttccactacggctccatctcgctcatctcc 574
|||||| |||| | |||||||||| | | |||||||||||||||||||| |||||| ||
Sbjct: 21371 aacctggacctgatccggcgcgccaagatcttccactacggctccatctccctcatcacc 21312
Query: 575 gagccgtgccgctcggcgcacatggccgccatgcgcgcagccaaggccgcgggcgtgctc 634
|||||||||||||| || ||| | |||||||||||||| |||||| | || ||| | |||
Sbjct: 21311 gagccgtgccgctccgcccacgtcgccgccatgcgcgccgccaagtcggccggcatcctc 21252
Query: 635 tgctcctacgaccccaacgtgcgcctcccgctctggccgtcgcccgacgccgcacgcgag 694
|||||||||||||||||||| |||||||||||||||||||| |||||||| ||||
Sbjct: 21251 tgctcctacgaccccaacgtccgcctcccgctctggccgtccgaggacgccgcccgcgcc 21192
Query: 695 ggcatcctcagcatctggaaggaggccgacttcatcaaggtcagcgacgacgaggtggcc 754
||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 21191 ggcatcctctccatctggaaggaggccgacttcatcaaggtgagcgacgacgaggtcgcc 21132
Query: 755 ttcctcacgcgcggggacgccaacgacgagaagaacgtgctgtccctgtggtttgacggg 814
|||||||| | || |||||||||||||||||||||||||| || || ||||| |||||
Sbjct: 21131 ttcctcacccagggcgacgccaacgacgagaagaacgtgctctcgctctggttcgacggc 21072
Query: 815 ctcaagctgctcgtcgtcaccgacggggacaagggatgcaggtacttcaccaaggacttc 874
|||||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 21071 ctcaagctcctcatcgtcaccgacggcgagaagggatgcaggtacttcaccaaggacttc 21012
Query: 875 aagggcagcgtgcccggcttcaaggtcgacaccgtcgacaccaccggcgccggcgacgcc 934
|||||| ||| ||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 21011 aagggctccgtccccggcttctccgtcaacaccgtcgacaccaccggcgccggcgacgcc 20952
Query: 935 ttcgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccac 985
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20951 ttcgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccac 20901
Score = 242 bits (122), Expect = 5e-061
Identities = 155/166 (93%)
Strand = Plus / Minus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 22973 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 22914
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 22913 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 22854
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaag 322
|||||||||| |||||||||| || |||||||||||||||||||||
Sbjct: 22853 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaag 22808
Score = 129 bits (65), Expect = 5e-027
Identities = 104/117 (88%)
Strand = Plus / Minus
Query: 986 aacgaggagaagctccgcgaggctctcaagttctccaacgcctgcggcgccatctgcacc 1045
|||||||||||||| | ||||| ||||||||||| ||||| ||||| ||||||||||||
Sbjct: 20824 aacgaggagaagctgagggaggcgctcaagttctcgaacgcgtgcggagccatctgcacc 20765
Query: 1046 accaagaagggcgccatcccggcgctgcccacggtcgccaccgcccaggacctcatc 1102
||||||||||| |||||||||||||||||||| |||||| ||| ||||| ||||||
Sbjct: 20764 accaagaagggtgccatcccggcgctgcccaccgtcgccgtcgcgcaggagctcatc 20708
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 712 bits (359), Expect = 0.0
Identities = 578/651 (88%)
Strand = Plus / Plus
Query: 335 gagttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgc 394
||||||||||||||| ||||| ||||||||||| ||||| |||||| |||||||||||
Sbjct: 462887 gagttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcggaggggtgc 462946
Query: 395 ctgttcgacaagcacgcgcggacggcgctggccttcgtgacgctcaagcacgacggggag 454
||||||||| |||||||||| ||||||||||| |||||||| | || | |||| |||
Sbjct: 462947 ctgttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttgaaaagcaacggcgag 463006
Query: 455 cgcgagttcatgttctacaggaacccgagcgcggacatgctgctgacggaggcggagctg 514
|||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||
Sbjct: 463007 cgcgagttcatgttctaccggaacccgagcgccgacatgctcctgacggaggcggagctc 463066
Query: 515 gacctgggcctggtgcggcgcgccagggtgttccactacggctccatctcgctcatctcc 574
|||||| |||| | |||||||||| | | |||||||||||||||||||| |||||| ||
Sbjct: 463067 aacctggacctgatccggcgcgccaagatcttccactacggctccatctccctcatcacc 463126
Query: 575 gagccgtgccgctcggcgcacatggccgccatgcgcgcagccaaggccgcgggcgtgctc 634
|||||||||||||| || ||| | |||||||||||||| |||||| | || ||| | |||
Sbjct: 463127 gagccgtgccgctccgcccacgtcgccgccatgcgcgccgccaagtcggccggcatcctc 463186
Query: 635 tgctcctacgaccccaacgtgcgcctcccgctctggccgtcgcccgacgccgcacgcgag 694
|||||||||||||||||||| |||||||||||||||||||| |||||||| ||||
Sbjct: 463187 tgctcctacgaccccaacgtccgcctcccgctctggccgtccgaggacgccgcccgcgcc 463246
Query: 695 ggcatcctcagcatctggaaggaggccgacttcatcaaggtcagcgacgacgaggtggcc 754
||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 463247 ggcatcctctccatctggaaggaggccgacttcatcaaggtgagcgacgacgaggtcgcc 463306
Query: 755 ttcctcacgcgcggggacgccaacgacgagaagaacgtgctgtccctgtggtttgacggg 814
|||||||| | || |||||||||||||||||||||||||| || || ||||| |||||
Sbjct: 463307 ttcctcacccagggcgacgccaacgacgagaagaacgtgctctcgctctggttcgacggc 463366
Query: 815 ctcaagctgctcgtcgtcaccgacggggacaagggatgcaggtacttcaccaaggacttc 874
|||||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 463367 ctcaagctcctcatcgtcaccgacggcgagaagggatgcaggtacttcaccaaggacttc 463426
Query: 875 aagggcagcgtgcccggcttcaaggtcgacaccgtcgacaccaccggcgccggcgacgcc 934
|||||| ||| ||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 463427 aagggctccgtccccggcttctccgtcaacaccgtcgacaccaccggcgccggcgacgcc 463486
Query: 935 ttcgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccac 985
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463487 ttcgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccac 463537
Score = 242 bits (122), Expect = 5e-061
Identities = 155/166 (93%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 461465 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 461524
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 461525 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 461584
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaag 322
|||||||||| |||||||||| || |||||||||||||||||||||
Sbjct: 461585 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaag 461630
Score = 129 bits (65), Expect = 5e-027
Identities = 104/117 (88%)
Strand = Plus / Plus
Query: 986 aacgaggagaagctccgcgaggctctcaagttctccaacgcctgcggcgccatctgcacc 1045
|||||||||||||| | ||||| ||||||||||| ||||| ||||| ||||||||||||
Sbjct: 463614 aacgaggagaagctgagggaggcgctcaagttctcgaacgcgtgcggagccatctgcacc 463673
Query: 1046 accaagaagggcgccatcccggcgctgcccacggtcgccaccgcccaggacctcatc 1102
||||||||||| |||||||||||||||||||| |||||| ||| ||||| ||||||
Sbjct: 463674 accaagaagggtgccatcccggcgctgcccaccgtcgccgtcgcgcaggagctcatc 463730
Score = 46.1 bits (23), Expect = 0.057
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 912 acaccaccggcgccggcgacgcc 934
|||||||||||||||||||||||
Sbjct: 25524823 acaccaccggcgccggcgacgcc 25524845
>gb|CH401228.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000065
genomic scaffold, whole genome shotgun sequence
Length = 5026603
Score = 712 bits (359), Expect = 0.0
Identities = 578/651 (88%)
Strand = Plus / Plus
Query: 335 gagttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgc 394
||||||||||||||| ||||| ||||||||||| ||||| |||||| |||||||||||
Sbjct: 697335 gagttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcggaggggtgc 697394
Query: 395 ctgttcgacaagcacgcgcggacggcgctggccttcgtgacgctcaagcacgacggggag 454
||||||||| |||||||||| ||||||||||| |||||||| | || | |||| |||
Sbjct: 697395 ctgttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttgaaaagcaacggcgag 697454
Query: 455 cgcgagttcatgttctacaggaacccgagcgcggacatgctgctgacggaggcggagctg 514
|||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||
Sbjct: 697455 cgcgagttcatgttctaccggaacccgagcgccgacatgctcctgacggaggcggagctc 697514
Query: 515 gacctgggcctggtgcggcgcgccagggtgttccactacggctccatctcgctcatctcc 574
|||||| |||| | |||||||||| | | |||||||||||||||||||| |||||| ||
Sbjct: 697515 aacctggacctgatccggcgcgccaagatcttccactacggctccatctccctcatcacc 697574
Query: 575 gagccgtgccgctcggcgcacatggccgccatgcgcgcagccaaggccgcgggcgtgctc 634
|||||||||||||| || ||| | |||||||||||||| |||||| | || ||| | |||
Sbjct: 697575 gagccgtgccgctccgcccacgtcgccgccatgcgcgccgccaagtcggccggcatcctc 697634
Query: 635 tgctcctacgaccccaacgtgcgcctcccgctctggccgtcgcccgacgccgcacgcgag 694
|||||||||||||||||||| |||||||||||||||||||| |||||||| ||||
Sbjct: 697635 tgctcctacgaccccaacgtccgcctcccgctctggccgtccgaggacgccgcccgcgcc 697694
Query: 695 ggcatcctcagcatctggaaggaggccgacttcatcaaggtcagcgacgacgaggtggcc 754
||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 697695 ggcatcctctccatctggaaggaggccgacttcatcaaggtgagcgacgacgaggtcgcc 697754
Query: 755 ttcctcacgcgcggggacgccaacgacgagaagaacgtgctgtccctgtggtttgacggg 814
|||||||| | || |||||||||||||||||||||||||| || || ||||| |||||
Sbjct: 697755 ttcctcacccagggcgacgccaacgacgagaagaacgtgctctcgctctggttcgacggc 697814
Query: 815 ctcaagctgctcgtcgtcaccgacggggacaagggatgcaggtacttcaccaaggacttc 874
|||||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 697815 ctcaagctcctcatcgtcaccgacggcgagaagggatgcaggtacttcaccaaggacttc 697874
Query: 875 aagggcagcgtgcccggcttcaaggtcgacaccgtcgacaccaccggcgccggcgacgcc 934
|||||| ||| ||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 697875 aagggctccgtccccggcttctccgtcaacaccgtcgacaccaccggcgccggcgacgcc 697934
Query: 935 ttcgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccac 985
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697935 ttcgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccac 697985
Score = 242 bits (122), Expect = 5e-061
Identities = 155/166 (93%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 695913 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 695972
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 695973 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 696032
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaag 322
|||||||||| |||||||||| || |||||||||||||||||||||
Sbjct: 696033 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaag 696078
Score = 129 bits (65), Expect = 5e-027
Identities = 104/117 (88%)
Strand = Plus / Plus
Query: 986 aacgaggagaagctccgcgaggctctcaagttctccaacgcctgcggcgccatctgcacc 1045
|||||||||||||| | ||||| ||||||||||| ||||| ||||| ||||||||||||
Sbjct: 698062 aacgaggagaagctgagggaggcgctcaagttctcgaacgcgtgcggagccatctgcacc 698121
Query: 1046 accaagaagggcgccatcccggcgctgcccacggtcgccaccgcccaggacctcatc 1102
||||||||||| |||||||||||||||||||| |||||| ||| ||||| ||||||
Sbjct: 698122 accaagaagggtgccatcccggcgctgcccaccgtcgccgtcgcgcaggagctcatc 698178
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 712 bits (359), Expect = 0.0
Identities = 578/651 (88%)
Strand = Plus / Plus
Query: 335 gagttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgc 394
||||||||||||||| ||||| ||||||||||| ||||| |||||| |||||||||||
Sbjct: 697335 gagttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcggaggggtgc 697394
Query: 395 ctgttcgacaagcacgcgcggacggcgctggccttcgtgacgctcaagcacgacggggag 454
||||||||| |||||||||| ||||||||||| |||||||| | || | |||| |||
Sbjct: 697395 ctgttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttgaaaagcaacggcgag 697454
Query: 455 cgcgagttcatgttctacaggaacccgagcgcggacatgctgctgacggaggcggagctg 514
|||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||
Sbjct: 697455 cgcgagttcatgttctaccggaacccgagcgccgacatgctcctgacggaggcggagctc 697514
Query: 515 gacctgggcctggtgcggcgcgccagggtgttccactacggctccatctcgctcatctcc 574
|||||| |||| | |||||||||| | | |||||||||||||||||||| |||||| ||
Sbjct: 697515 aacctggacctgatccggcgcgccaagatcttccactacggctccatctccctcatcacc 697574
Query: 575 gagccgtgccgctcggcgcacatggccgccatgcgcgcagccaaggccgcgggcgtgctc 634
|||||||||||||| || ||| | |||||||||||||| |||||| | || ||| | |||
Sbjct: 697575 gagccgtgccgctccgcccacgtcgccgccatgcgcgccgccaagtcggccggcatcctc 697634
Query: 635 tgctcctacgaccccaacgtgcgcctcccgctctggccgtcgcccgacgccgcacgcgag 694
|||||||||||||||||||| |||||||||||||||||||| |||||||| ||||
Sbjct: 697635 tgctcctacgaccccaacgtccgcctcccgctctggccgtccgaggacgccgcccgcgcc 697694
Query: 695 ggcatcctcagcatctggaaggaggccgacttcatcaaggtcagcgacgacgaggtggcc 754
||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 697695 ggcatcctctccatctggaaggaggccgacttcatcaaggtgagcgacgacgaggtcgcc 697754
Query: 755 ttcctcacgcgcggggacgccaacgacgagaagaacgtgctgtccctgtggtttgacggg 814
|||||||| | || |||||||||||||||||||||||||| || || ||||| |||||
Sbjct: 697755 ttcctcacccagggcgacgccaacgacgagaagaacgtgctctcgctctggttcgacggc 697814
Query: 815 ctcaagctgctcgtcgtcaccgacggggacaagggatgcaggtacttcaccaaggacttc 874
|||||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 697815 ctcaagctcctcatcgtcaccgacggcgagaagggatgcaggtacttcaccaaggacttc 697874
Query: 875 aagggcagcgtgcccggcttcaaggtcgacaccgtcgacaccaccggcgccggcgacgcc 934
|||||| ||| ||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 697875 aagggctccgtccccggcttctccgtcaacaccgtcgacaccaccggcgccggcgacgcc 697934
Query: 935 ttcgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccac 985
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697935 ttcgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccac 697985
Score = 242 bits (122), Expect = 5e-061
Identities = 155/166 (93%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 695913 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 695972
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 695973 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 696032
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaag 322
|||||||||| |||||||||| || |||||||||||||||||||||
Sbjct: 696033 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaag 696078
Score = 129 bits (65), Expect = 5e-027
Identities = 104/117 (88%)
Strand = Plus / Plus
Query: 986 aacgaggagaagctccgcgaggctctcaagttctccaacgcctgcggcgccatctgcacc 1045
|||||||||||||| | ||||| ||||||||||| ||||| ||||| ||||||||||||
Sbjct: 698062 aacgaggagaagctgagggaggcgctcaagttctcgaacgcgtgcggagccatctgcacc 698121
Query: 1046 accaagaagggcgccatcccggcgctgcccacggtcgccaccgcccaggacctcatc 1102
||||||||||| |||||||||||||||||||| |||||| ||| ||||| ||||||
Sbjct: 698122 accaagaagggtgccatcccggcgctgcccaccgtcgccgtcgcgcaggagctcatc 698178
Score = 46.1 bits (23), Expect = 0.057
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 912 acaccaccggcgccggcgacgcc 934
|||||||||||||||||||||||
Sbjct: 24597902 acaccaccggcgccggcgacgcc 24597924
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
complete sequence
Length = 28434780
Score = 712 bits (359), Expect = 0.0
Identities = 578/651 (88%)
Strand = Plus / Plus
Query: 335 gagttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgc 394
||||||||||||||| ||||| ||||||||||| ||||| |||||| |||||||||||
Sbjct: 696461 gagttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcggaggggtgc 696520
Query: 395 ctgttcgacaagcacgcgcggacggcgctggccttcgtgacgctcaagcacgacggggag 454
||||||||| |||||||||| ||||||||||| |||||||| | || | |||| |||
Sbjct: 696521 ctgttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttgaaaagcaacggcgag 696580
Query: 455 cgcgagttcatgttctacaggaacccgagcgcggacatgctgctgacggaggcggagctg 514
|||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||
Sbjct: 696581 cgcgagttcatgttctaccggaacccgagcgccgacatgctcctgacggaggcggagctc 696640
Query: 515 gacctgggcctggtgcggcgcgccagggtgttccactacggctccatctcgctcatctcc 574
|||||| |||| | |||||||||| | | |||||||||||||||||||| |||||| ||
Sbjct: 696641 aacctggacctgatccggcgcgccaagatcttccactacggctccatctccctcatcacc 696700
Query: 575 gagccgtgccgctcggcgcacatggccgccatgcgcgcagccaaggccgcgggcgtgctc 634
|||||||||||||| || ||| | |||||||||||||| |||||| | || ||| | |||
Sbjct: 696701 gagccgtgccgctccgcccacgtcgccgccatgcgcgccgccaagtcggccggcatcctc 696760
Query: 635 tgctcctacgaccccaacgtgcgcctcccgctctggccgtcgcccgacgccgcacgcgag 694
|||||||||||||||||||| |||||||||||||||||||| |||||||| ||||
Sbjct: 696761 tgctcctacgaccccaacgtccgcctcccgctctggccgtccgaggacgccgcccgcgcc 696820
Query: 695 ggcatcctcagcatctggaaggaggccgacttcatcaaggtcagcgacgacgaggtggcc 754
||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 696821 ggcatcctctccatctggaaggaggccgacttcatcaaggtgagcgacgacgaggtcgcc 696880
Query: 755 ttcctcacgcgcggggacgccaacgacgagaagaacgtgctgtccctgtggtttgacggg 814
|||||||| | || |||||||||||||||||||||||||| || || ||||| |||||
Sbjct: 696881 ttcctcacccagggcgacgccaacgacgagaagaacgtgctctcgctctggttcgacggc 696940
Query: 815 ctcaagctgctcgtcgtcaccgacggggacaagggatgcaggtacttcaccaaggacttc 874
|||||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 696941 ctcaagctcctcatcgtcaccgacggcgagaagggatgcaggtacttcaccaaggacttc 697000
Query: 875 aagggcagcgtgcccggcttcaaggtcgacaccgtcgacaccaccggcgccggcgacgcc 934
|||||| ||| ||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 697001 aagggctccgtccccggcttctccgtcaacaccgtcgacaccaccggcgccggcgacgcc 697060
Query: 935 ttcgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccac 985
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697061 ttcgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccac 697111
Score = 242 bits (122), Expect = 5e-061
Identities = 155/166 (93%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 695039 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 695098
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 695099 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 695158
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaag 322
|||||||||| |||||||||| || |||||||||||||||||||||
Sbjct: 695159 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaag 695204
Score = 129 bits (65), Expect = 5e-027
Identities = 104/117 (88%)
Strand = Plus / Plus
Query: 986 aacgaggagaagctccgcgaggctctcaagttctccaacgcctgcggcgccatctgcacc 1045
|||||||||||||| | ||||| ||||||||||| ||||| ||||| ||||||||||||
Sbjct: 697188 aacgaggagaagctgagggaggcgctcaagttctcgaacgcgtgcggagccatctgcacc 697247
Query: 1046 accaagaagggcgccatcccggcgctgcccacggtcgccaccgcccaggacctcatc 1102
||||||||||| |||||||||||||||||||| |||||| ||| ||||| ||||||
Sbjct: 697248 accaagaagggtgccatcccggcgctgcccaccgtcgccgtcgcgcaggagctcatc 697304
Score = 46.1 bits (23), Expect = 0.057
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 912 acaccaccggcgccggcgacgcc 934
|||||||||||||||||||||||
Sbjct: 25762910 acaccaccggcgccggcgacgcc 25762932
>gb|BP184577.1|BP184577 BP184577 pNS rice panicle cDNA, flowering stage Oryza sativa
(japonica cultivar-group) cDNA clone 13YPG042, mRNA
sequence
Length = 720
Score = 702 bits (354), Expect = 0.0
Identities = 585/662 (88%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 59 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 118
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 119 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 178
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 179 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 238
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcct 396
||||||||||||| ||||| ||||||||||| ||||| |||||| |||||||||||||
Sbjct: 239 gttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcggaggggtgcct 298
Query: 397 gttcgacaagcacgcgcggacggcgctggccttcgtgacgctcaagcacgacggggagcg 456
||||||| |||||||||| ||||||||||| |||||||| | || | |||| |||||
Sbjct: 299 gttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttgaaaagcaacggcgagcg 358
Query: 457 cgagttcatgttctacaggaacccgagcgcggacatgctgctgacggaggcggagctgga 516
|||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 359 cgagttcatgttctaccggaacccgagcgccgacatgctcctgacggaggcggagctcaa 418
Query: 517 cctgggcctggtgcggcgcgccagggtgttccactacggctccatctcgctcatctccga 576
||||| |||| | |||||||||| | | |||||||||||||||||||| |||||| ||||
Sbjct: 419 cctggacctgatccggcgcgccaagatcttccactacggctccatctccctcatcaccga 478
Query: 577 gccgtgccgctcggcgcacatggccgccatgcgcgcagccaaggccgcgggcgtgctctg 636
|||||||||||| || ||| | |||||||||||||| |||||| | || ||| | |||||
Sbjct: 479 gccgtgccgctccgcccacgtcgccgccatgcgcgccgccaagtcggccggcatcctctg 538
Query: 637 ctcctacgaccccaacgtgcgcctcccgctctggccgtcgcccgacgccgcacgcgaggg 696
|||||||||||||||||| |||||||||||||||||||| |||||||| |||| ||
Sbjct: 539 ctcctacgaccccaacgtccgcctcccgctctggccgtccgaggacgccgcccgcgccgg 598
Query: 697 catcctcagcatctggaaggaggccgacttcatcaaggtcagcgacgacgaggtggcctt 756
||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 599 catcctcttcatctggaaggaggccgacttcatcaaggtgagcgacgacgaggtcgcctt 658
Query: 757 cctcacgcgcggggacgccaacgacgagaagaacgtgctgtccctgtggtttgacgggct 816
|||||| | || |||||||||||||||||||||||||| || || ||||| ||||| ||
Sbjct: 659 cctcacccagggcgacgccaacgacgagaagaacgtgctctcgctctggttcgacggcct 718
Query: 817 ca 818
||
Sbjct: 719 ca 720
>gb|BP184860.1|BP184860 BP184860 pNS rice callus cDNA Oryza sativa (japonica
cultivar-group) cDNA clone 21C4AR003, mRNA sequence
Length = 687
Score = 676 bits (341), Expect = 0.0
Identities = 557/629 (88%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 59 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 118
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 119 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 178
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 179 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 238
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcct 396
||||||||||||| ||||| ||||||||||| ||||| |||||| |||||||||||||
Sbjct: 239 gttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcggaggggtgcct 298
Query: 397 gttcgacaagcacgcgcggacggcgctggccttcgtgacgctcaagcacgacggggagcg 456
||||||| |||||||||| ||||||||||| |||||||| | || | |||| |||||
Sbjct: 299 gttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttgaaaagcaacggcgagcg 358
Query: 457 cgagttcatgttctacaggaacccgagcgcggacatgctgctgacggaggcggagctgga 516
|||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 359 cgagttcatgttctaccggaacccgagcgccgacatgctcctgacggaggcggagctcaa 418
Query: 517 cctgggcctggtgcggcgcgccagggtgttccactacggctccatctcgctcatctccga 576
||||| |||| | |||||||||| | | |||||||||||||||||||| |||||| ||||
Sbjct: 419 cctggacctgatccggcgcgccaagatcttccactacggctccatctccctcatcaccga 478
Query: 577 gccgtgccgctcggcgcacatggccgccatgcgcgcagccaaggccgcgggcgtgctctg 636
|||||||||||| || ||| | |||||||||||||| |||||| | || ||| | |||||
Sbjct: 479 gccgtgccgctccgcccacgtcgccgccatgcgcgccgccaagtcggccggcatcctctg 538
Query: 637 ctcctacgaccccaacgtgcgcctcccgctctggccgtcgcccgacgccgcacgcgaggg 696
|||||||||||||||||| |||||||||||||||||||| |||||||| |||| ||
Sbjct: 539 ctcctacgaccccaacgtccgcctcccgctctggccgtccgaggacgccgcccgcgccgg 598
Query: 697 catcctcagcatctggaaggaggccgacttcatcaaggtcagcgacgacgaggtggcctt 756
||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 599 catcctctccatctggaaggaggccgacttcatcaaggtgagcgacgacgaggtcgcctt 658
Query: 757 cctcacgcgcggggacgccaacgacgaga 785
|||||| | || ||||||||||||||||
Sbjct: 659 cctcacccagggcgacgccaacgacgaga 687
>gb|BP184651.1|BP184651 BP184651 pNS rice panicle cDNA, germ cell generating stage Oryza
sativa (japonica cultivar-group) cDNA clone 14FPB104,
mRNA sequence
Length = 634
Score = 650 bits (328), Expect = 0.0
Identities = 553/627 (88%), Gaps = 1/627 (0%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 8 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 67
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 68 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 127
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 128 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 187
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcct 396
||||||||||||| ||||| ||||||||||| ||||| |||||| |||||||||||||
Sbjct: 188 gttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcggaggggtgcct 247
Query: 397 gttcgacaagcacgcgcggacggcgctggccttcgtgacgctcaagcacgacggggagcg 456
||||||| |||||||||| ||||||||||| |||||||| | || | |||| |||||
Sbjct: 248 gttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttgaaaagcaacggcgagcg 307
Query: 457 cgagttcatgttctacaggaacccgagcgcggacatgctgctgacggaggcggagctgga 516
|||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 308 cgagttcatgttctaccggaacccgagcgccgacatgctcctgacggaggcggagctcaa 367
Query: 517 cctgggcctggtgcggcgcgccagggtgttccactacggctccatctcgctcatctccga 576
||||| |||| | |||||||||| | | |||||||||||||||||||| |||||| ||||
Sbjct: 368 cctggacctgatccggcgcgccaagatcttccactacggctccatctccctcatcaccga 427
Query: 577 gccgtgccgctcggcgcacatggccgccatgcgcgcagccaaggccgcgggcgtgctctg 636
|||||||||||| | ||| | |||||||||||||| |||||| | || ||| | |||||
Sbjct: 428 gccgtgccgctccgnccacgtcgccgccatgcgcgccgccaagtcggccggcatcctctg 487
Query: 637 ctcctacgaccccaacgtgcgcctcccgctctggccgtcgcccgacgccgcacgcgaggg 696
|||||||||||||||||| |||||||||||||||||||| |||||||| |||| ||
Sbjct: 488 ctcctacgaccccaacgtccgcctcccgctctggccgtccgaggacgccgcccgcgccgg 547
Query: 697 catcctcagcatctggaaggaggccgacttcatcaaggtcag-cgacgacgaggtggcct 755
||||||| |||||||||||||||||||||||||||||| || |||||||||||| ||||
Sbjct: 548 catcctctccatctggaaggaggccgacttcatcaaggtgagccgacgacgaggtcgcct 607
Query: 756 tcctcacgcgcggggacgccaacgacg 782
||||||| | || |||||||||||||
Sbjct: 608 tcctcacccagggcgacgccaacgacg 634
>gb|BP184646.1|BP184646 BP184646 pNS rice panicle cDNA, germ cell generating stage Oryza
sativa (japonica cultivar-group) cDNA clone 14FPB089,
mRNA sequence
Length = 619
Score = 630 bits (318), Expect = e-178
Identities = 525/594 (88%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 23 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 82
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 83 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 142
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 143 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 202
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcct 396
||||||||||||| ||||| ||||||||||| ||||| |||||| |||||||||||||
Sbjct: 203 gttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcggaggggtgcct 262
Query: 397 gttcgacaagcacgcgcggacggcgctggccttcgtgacgctcaagcacgacggggagcg 456
||||||| |||||||||| ||||||||||| |||||||| | || | |||| |||||
Sbjct: 263 gttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttgaaaagcaacggcgagcg 322
Query: 457 cgagttcatgttctacaggaacccgagcgcggacatgctgctgacggaggcggagctgga 516
|||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 323 cgagttcatgttctaccggaacccgagcgccgacatgctcctgacggaggcggagctcaa 382
Query: 517 cctgggcctggtgcggcgcgccagggtgttccactacggctccatctcgctcatctccga 576
||||| |||| | |||||||||| | | |||||||||||||||||||| |||||| ||||
Sbjct: 383 cctggacctgatccggcgcgccaagatcttccactacggctccatctccctcatcaccga 442
Query: 577 gccgtgccgctcggcgcacatggccgccatgcgcgcagccaaggccgcgggcgtgctctg 636
|||||||||||| || ||| | |||||||||||||| | |||| | || ||| | |||||
Sbjct: 443 gccgtgccgctccgcccacgtcgccgccatgcgcgccgtcaagtcggccggcatcctctg 502
Query: 637 ctcctacgaccccaacgtgcgcctcccgctctggccgtcgcccgacgccgcacgcgaggg 696
|||||||||||||||||| ||||| |||||||||||||| |||||||| |||| ||
Sbjct: 503 ctcctacgaccccaacgtccgcctgccgctctggccgtccgaggacgccgcccgcgccgg 562
Query: 697 catcctcagcatctggaaggaggccgacttcatcaaggtcagcgacgacgaggt 750
||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 563 catcctctccatctggaaggaggccgacttcatcaaggtgagcgacgacgaggt 616
>emb|AX364142.1| Sequence 149 from Patent WO0208410
Length = 629
Score = 533 bits (269), Expect = e-149
Identities = 437/493 (88%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 137 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 196
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 197 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 256
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 257 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 316
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcct 396
||||||||||||| ||||| ||||||||||| ||||| |||||| |||||||||||||
Sbjct: 317 gttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcggaggggtgcct 376
Query: 397 gttcgacaagcacgcgcggacggcgctggccttcgtgacgctcaagcacgacggggagcg 456
||||||| |||||||||| ||||||||||| |||||||| | || | |||| |||||
Sbjct: 377 gttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttgaaaagcaacggcgagcg 436
Query: 457 cgagttcatgttctacaggaacccgagcgcggacatgctgctgacggaggcggagctgga 516
|||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 437 cgagttcatgttctaccggaacccgagcgccgacatgctcctgacggaggcggagctcaa 496
Query: 517 cctgggcctggtgcggcgcgccagggtgttccactacggctccatctcgctcatctccga 576
||||| |||| | |||||||||| | | |||||||||||||||||||| |||||| ||||
Sbjct: 497 cctggacctgatccggcgcgccaagatcttccactacggctccatctccctcatcaccga 556
Query: 577 gccgtgccgctcggcgcacatggccgccatgcgcgcagccaaggccgcgggcgtgctctg 636
|||||||||||| || ||| | |||||||||||||| |||||| | || ||| | |||||
Sbjct: 557 gccgtgccgctccgcccacgtcgccgccatgcgcgccgccaagtcggccggcatcctctg 616
Query: 637 ctcctacgacccc 649
|||||||||||||
Sbjct: 617 ctcctacgacccc 629
>emb|AX364158.1| Sequence 165 from Patent WO0208410
Length = 633
Score = 533 bits (269), Expect = e-149
Identities = 437/493 (88%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 141 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 200
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 201 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 260
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 261 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 320
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcct 396
||||||||||||| ||||| ||||||||||| ||||| |||||| |||||||||||||
Sbjct: 321 gttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcggaggggtgcct 380
Query: 397 gttcgacaagcacgcgcggacggcgctggccttcgtgacgctcaagcacgacggggagcg 456
||||||| |||||||||| ||||||||||| |||||||| | || | |||| |||||
Sbjct: 381 gttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttgaaaagcaacggcgagcg 440
Query: 457 cgagttcatgttctacaggaacccgagcgcggacatgctgctgacggaggcggagctgga 516
|||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 441 cgagttcatgttctaccggaacccgagcgccgacatgctcctgacggaggcggagctcaa 500
Query: 517 cctgggcctggtgcggcgcgccagggtgttccactacggctccatctcgctcatctccga 576
||||| |||| | |||||||||| | | |||||||||||||||||||| |||||| ||||
Sbjct: 501 cctggacctgatccggcgcgccaagatcttccactacggctccatctccctcatcaccga 560
Query: 577 gccgtgccgctcggcgcacatggccgccatgcgcgcagccaaggccgcgggcgtgctctg 636
|||||||||||| || ||| | |||||||||||||| |||||| | || ||| | |||||
Sbjct: 561 gccgtgccgctccgcccacgtcgccgccatgcgcgccgccaagtcggccggcatcctctg 620
Query: 637 ctcctacgacccc 649
|||||||||||||
Sbjct: 621 ctcctacgacccc 633
>emb|AX364129.1| Sequence 136 from Patent WO0208410
Length = 580
Score = 502 bits (253), Expect = e-139
Identities = 409/461 (88%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |
Sbjct: 120 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtctccggcgt 179
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 180 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 239
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 240 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 299
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcct 396
||||||||||||| ||||| ||||||||||| ||||| |||||| |||||||||||||
Sbjct: 300 gttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcggaggggtgcct 359
Query: 397 gttcgacaagcacgcgcggacggcgctggccttcgtgacgctcaagcacgacggggagcg 456
||||||| |||||||||| ||||||||||| |||||||| | || | |||| |||||
Sbjct: 360 gttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttgaaaagcaacggcgagcg 419
Query: 457 cgagttcatgttctacaggaacccgagcgcggacatgctgctgacggaggcggagctgga 516
|||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 420 cgagttcatgttctaccggaacccgagcgccgacatgctcctgacggaggcggagctcaa 479
Query: 517 cctgggcctggtgcggcgcgccagggtgttccactacggctccatctcgctcatctccga 576
||||| |||| | |||||||||| | | |||||||||||||||||||| |||||| ||||
Sbjct: 480 cctggacctgatccggcgcgccaagatcttccactacggctccatctccctcatcaccga 539
Query: 577 gccgtgccgctcggcgcacatggccgccatgcgcgcagcca 617
|||||||||||| || ||| | |||||||||||||| ||||
Sbjct: 540 gccgtgccgctccgcccacgtcgccgccatgcgcgccgcca 580
>gb|BP184510.1|BP184510 BP184510 pNS rice panicle cDNA, germ cell generating stage Oryza
sativa (japonica cultivar-group) cDNA clone 13FPR005,
mRNA sequence
Length = 576
Score = 416 bits (210), Expect = e-113
Identities = 330/370 (89%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 62 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 121
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 122 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 181
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 182 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 241
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcct 396
||||||||||||| ||||| ||||||||||| ||||| |||||| |||||||||||||
Sbjct: 242 gttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcggaggggtgcct 301
Query: 397 gttcgacaagcacgcgcggacggcgctggccttcgtgacgctcaagcacgacggggagcg 456
||||||| |||||||||| ||||||||||| |||||||| | || | |||| || ||
Sbjct: 302 gttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttgaaaagcaacggcgaacg 361
Query: 457 cgagttcatgttctacaggaacccgagcgcggacatgctgctgacggaggcggagctgga 516
|||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 362 cgagttcatgttctaccggaacccgagcgccgacatgctcctgacggaggcggagcttaa 421
Query: 517 cctgggcctg 526
||||| ||||
Sbjct: 422 cctggacctg 431
>gb|AU165750.1|AU165750 AU165750 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E4301, mRNA sequence
Length = 594
Score = 408 bits (206), Expect = e-111
Identities = 302/333 (90%), Gaps = 2/333 (0%)
Strand = Plus / Plus
Query: 770 gacgccaacgacgagaagaacgtgctgtccctgtggtttgacgggctcaagctgctcgtc 829
|||||||||||||||||||||||||| || || ||||| ||||| |||||||| ||| ||
Sbjct: 15 gacgccaacgacgagaagaacgtgctctcgctctggttcgacggcctcaagctcctcatc 74
Query: 830 gtcaccgacggggacaagggatgcaggtacttcaccaaggacttcaagggcagcgtgccc 889
||||||||||| || |||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 75 gtcaccgacggcgagaagggatgcaggtacttcaccaaggacttcaagggctccgtcccc 134
Query: 890 ggcttcaaggtcgacaccgtcgacaccaccggcgccggcgacgccttcgtcggctccctc 949
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 ggcttctccgtcaacaccgtcgacaccaccggcgccggcgacgccttcgtcggctccctc 194
Query: 950 ctcgtcaacgtcgccaaggacgactccatcttccacaacgaggagaagctccgcgaggct 1009
||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||
Sbjct: 195 ctcgtcaacgtcgccaaggacgactccatcttc--caacgaggagaagctgagggaggcg 252
Query: 1010 ctcaagttctccaacgcctgcggcgccatctgcaccaccaagaagggcgccatcccggcg 1069
||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 253 ctcaagttctcgaacgcgtgcggagccatctgcaccaccaagaagggtgccatcccggcg 312
Query: 1070 ctgcccacggtcgccaccgcccaggacctcatc 1102
|||||||| |||||| ||| ||||| ||||||
Sbjct: 313 ctgcccaccgtcgccgtcgcgcaggagctcatc 345
>gb|AU197852.1|AU197852 AU197852 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S10789, mRNA sequence
Length = 462
Score = 394 bits (199), Expect = e-107
Identities = 304/339 (89%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 123 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 182
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 183 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 242
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 243 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 302
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcct 396
||||||||||||| ||||| ||||||||||| ||||| |||||| |||||||||||||
Sbjct: 303 gttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcggaggggtgcct 362
Query: 397 gttcgacaagcacgcgcggacggcgctggccttcgtgacgctcaagcacgacggggagcg 456
||||||| |||||||||| ||||||||||| |||||||| | || | |||| |||||
Sbjct: 363 gttcgacgagcacgcgcgcacggcgctggcgttcgtgaccttgaaaagcaacggcgagcg 422
Query: 457 cgagttcatgttctacaggaacccgagcgcggacatgct 495
|||||||||||||||| ||||||||||||| ||||||||
Sbjct: 423 cgagttcatgttctaccggaacccgagcgccgacatgct 461
>gb|BP184346.1|BP184346 BP184346 pNS rice panicle cDNA, germ cell generating stage Oryza
sativa (japonica cultivar-group) cDNA clone 12FPB009,
mRNA sequence
Length = 426
Score = 394 bits (199), Expect = e-107
Identities = 321/359 (89%), Gaps = 2/359 (0%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 59 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 118
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 119 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 178
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 179 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 238
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcct 396
||||||||||||| ||||| ||||||||||| ||||| |||||| |||||||||||||
Sbjct: 239 gttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcggaggggtgcct 298
Query: 397 gttcgacaagcacgcgcggacggcgc-tggccttcgtgacgctcaagcacgacggggagc 455
||||||| |||||||||| ||||||| |||| |||||||| | || | |||| ||||
Sbjct: 299 gttcgacgagcacgcgcgcacggcgcttggcgttcgtgaccttgaaaagcaacggcgagc 358
Query: 456 g-cgagttcatgttctacaggaacccgagcgcggacatgctgctgacggaggcggagct 513
| |||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||
Sbjct: 359 gccgagttcatgttctaccggaacccgagcgccgacatgctcctgacggaggcggagct 417
>gb|AU184066.1|AU184066 AU184066 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0790, mRNA sequence
Length = 413
Score = 377 bits (190), Expect = e-101
Identities = 328/374 (87%)
Strand = Plus / Plus
Query: 302 tcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttggtgaacatc 361
||||||||||||||||||||||| || || || ||||||||||||||| ||||| |||||
Sbjct: 4 tcctccgccttcgtcggcaagtttggtgatgatgagttcgggcacatgctggtggacatc 63
Query: 362 ctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcgcggacggcg 421
|||||| ||||| |||||| |||||||||||||||||||| |||||||||| ||||||
Sbjct: 64 ctgaagaagaacggggtgaacgcggaggggtgcctgttcgacgagcacgcgcgcacggcg 123
Query: 422 ctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctacaggaacccg 481
||||| |||||||| | || | |||| ||||||||||||||||||||| ||||||||
Sbjct: 124 ctggcgttcgtgaccttgaaaagcaacggcgagcgcgagttcatgttctaccggaacccg 183
Query: 482 agcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcggcgcgccagg 541
||||| |||||||| ||||||||||||||||| |||||| |||| | |||||||||| |
Sbjct: 184 agcgccgacatgctcctgacggaggcggagctcaacctggacctgatccggcgcgccaag 243
Query: 542 gtgttccactacggctccatctcgctcatctccgagccgtgccgctcggcgcacatggcc 601
| |||||||||||||||||||| |||||| |||||||||||||||| || ||| | |||
Sbjct: 244 atcttccactacggctccatctccctcatcaccgagccgtgccgctccgcccacgtcgcc 303
Query: 602 gccatgcgcgcagccaaggccgcgggcgtgctctgctcctacgaccccaacgtgcgcctc 661
||||||||||| |||||| | || ||| | ||||||||||||||||||||||| ||||||
Sbjct: 304 gccatgcgcgccgccaagtcggccggcatcctctgctcctacgaccccaacgtccgcctc 363
Query: 662 ccgctctggccgtc 675
||||||||||||||
Sbjct: 364 ccgctctggccgtc 377
>gb|D41441.1|D41441 RICS3945A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 438
Score = 355 bits (179), Expect = 5e-095
Identities = 291/329 (88%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 110 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 169
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 170 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 229
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 230 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 289
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcct 396
||||||||||||| ||||| ||||||||||| ||||| |||||| |||||||||||||
Sbjct: 290 gttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcggaggggtgcct 349
Query: 397 gttcgacaagcacgcgcggacggcgctggccttcgtgacgctcaagcacgacggggagcg 456
||||||| |||||||||| |||||| |||| ||||| || | || | |||| |||||
Sbjct: 350 gttcgacgagcacgcgcgcacggcgttggcgttcgtnaccttgaaaagcaacggcgagcg 409
Query: 457 cgagttcatgttctacaggaacccgagcg 485
| ||||||||||||| ||||||||||||
Sbjct: 410 caagttcatgttctancggaacccgagcg 438
>gb|AU029608.1|AU029608 AU029608 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E31141_6Z, mRNA sequence
Length = 537
Score = 347 bits (175), Expect = 1e-092
Identities = 258/286 (90%)
Strand = Plus / Plus
Query: 817 caagctgctcgtcgtcaccgacggggacaagggatgcaggtacttcaccaaggacttcaa 876
|||||| ||| ||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 1 caagctcctcatcgtcaccgacggcgagaagggatgcaggtacttcaccaaggacttcaa 60
Query: 877 gggcagcgtgcccggcttcaaggtcgacaccgtcgacaccaccggcgccggcgacgcctt 936
|||| ||| ||||||||| ||| |||||||||||||||||||||||||||| |||
Sbjct: 61 gggctccgtccccggcttctccgtcaacaccgtcgacaccaccggcgccggcgaacgctt 120
Query: 937 cgtcggctccctcctcgtcaacgtcgccaaggacgactccatcttccacaacgaggagaa 996
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgtcggctccctcctcntcaacgtcgccaaggacgactccatcttccacaacgaggagaa 180
Query: 997 gctccgcgaggctctcaagttctccaacgcctgcggcgccatctgcaccaccaagaaggg 1056
||| | ||||| ||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 181 gctgagggaggcgctcaagttctcgaacgcgtgcggagccatctgcaccaccaagaaggg 240
Query: 1057 cgccatcccggcgctgcccacggtcgccaccgcccaggacctcatc 1102
|||||||||||||||||||| |||||| ||| ||||| ||||||
Sbjct: 241 tgccatcccggcgctgcccaccgtcgccgtcgcgcaggagctcatc 286
>gb|AU184057.1|AU184057 AU184057 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0693, mRNA sequence
Length = 367
Score = 337 bits (170), Expect = 1e-089
Identities = 307/353 (86%)
Strand = Plus / Plus
Query: 302 tcctccgccttcgtcggcaagttcggcgacgacgagttcgggcacatgttggtgaacatc 361
||||||||||||||||||||||| || || || ||||||||||||||| ||||| |||||
Sbjct: 4 tcctccgccttcgtcggcaagtttggtgatgatgagttcgggcacatgctggtggacatc 63
Query: 362 ctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacgcgcggacggcg 421
|||||| ||||| |||||| |||||||||||||||||||| |||||||||| ||||||
Sbjct: 64 ctgaagaagaacggggtgaacgcggaggggtgcctgttcgacgagcacgcgcgcacggcg 123
Query: 422 ctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttctacaggaacccg 481
||||| |||||||| | || | |||| ||||||||||||||||||||| ||||||||
Sbjct: 124 ctggcgttcgtgaccttgaaaagcaacggcgagcgcgagttcatgttctaccggaacccg 183
Query: 482 agcgcggacatgctgctgacggaggcggagctggacctgggcctggtgcggcgcgccagg 541
||||| |||||||| ||||||||||||||||| |||||| |||| | |||||||||| |
Sbjct: 184 agcgccgacatgctcctgacggaggcggagctcaacctggacctgatccggcgcgccaag 243
Query: 542 gtgttccactacggctccatctcgctcatctccgagccgtgccgctcggcgcacatggcc 601
| |||||||||||||||||||| |||||| |||||||||||||||| || ||| | |||
Sbjct: 244 atcttccactacggctccatctccctcatcaccgagccgtgccgctccgcccacgtcgcc 303
Query: 602 gccatgcgcgcagccaaggccgcgggcgtgctctgctcctacgaccccaacgt 654
||||||||||| |||||| | || ||| | || ||||||||||||||||||||
Sbjct: 304 gccatgcgcgccgccaagtcggccggcatcctntgctcctacgaccccaacgt 356
>gb|AU063943.1|AU063943 AU063943 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2248_1A, mRNA sequence
Length = 460
Score = 323 bits (163), Expect = 2e-085
Identities = 279/315 (88%), Gaps = 2/315 (0%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 111 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 170
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 171 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgc-cccgccaacgtcgc 229
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 230 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 289
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcct 396
||||||||||||| ||||| ||||||||||| ||||| |||||| |||| ||||||||
Sbjct: 290 gttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcggaagggtgcct 349
Query: 397 gttcgacaagcacgcgcggacggcgctggccttcgtgacgctcaagcacgacggggagcg 456
||||||| |||||||||| |||| |||||| ||||||| | || | |||| |||||
Sbjct: 350 gttcgacgagcacgcgcgcacgg-gctggcgttcgtgaacttgaaaagcaacggcgagcg 408
Query: 457 cgagttcatgttcta 471
|||||||||||||||
Sbjct: 409 cgagttcatgttcta 423
>gb|AU166103.1|AU166103 AU166103 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E31508, mRNA sequence
Length = 542
Score = 317 bits (160), Expect = 1e-083
Identities = 246/273 (90%), Gaps = 2/273 (0%)
Strand = Plus / Plus
Query: 831 tcaccgacggggacaagggatgcaggtacttcaccaaggacttcaagggcagcgtgcccg 890
|||||||||| || |||| ||||||||||||||||||||| ||||||||| ||| ||||
Sbjct: 14 tcaccgacggcgagaaggnatgcaggtacttcaccaagga-ttcaagggctccgtccccg 72
Query: 891 gcttcaaggtcgacaccgtcgacaccaccggcgcc-ggcgacgccttcgtcggctccctc 949
||||| ||| ||||| ||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 73 gcttctccgtcaacaccntcgacaccaccggcgcccggcgacgccttcgtcggntccctc 132
Query: 950 ctcgtcaacgtcgccaaggacgactccatcttccacaacgaggagaagctccgcgaggct 1009
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 133 ctcgtcaacgtcgccaaggacgactccatcttccacaacgaggagaagctgagggaggcg 192
Query: 1010 ctcaagttctccaacgcctgcggcgccatctgcaccaccaagaagggcgccatcccggcg 1069
||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 193 ctcaagttctcgaacgcgtgcggagccatctgcaccaccaagaagggtgccatcccggcg 252
Query: 1070 ctgcccacggtcgccaccgcccaggacctcatc 1102
|||||||| |||||| ||| ||||| ||||||
Sbjct: 253 ctgcccaccgtcgccgtcgcgcaggagctcatc 285
>gb|C91889.2|C91889 C91889 Rice cDNA from immature leaf including apical meristem Oryza
sativa (japonica cultivar-group) cDNA clone E61661_1A,
mRNA sequence
Length = 590
Score = 311 bits (157), Expect = 6e-082
Identities = 234/257 (91%), Gaps = 2/257 (0%)
Strand = Plus / Plus
Query: 846 agggatgcaggtacttcaccaaggacttcaagggcagcgtgcccggcttcaaggtcgaca 905
||||||||||||||| ||||||||||||||||| | ||| ||||||||| ||| |||
Sbjct: 30 agggatgcaggtact-caccaaggacttcaagg-ctccgtccccggcttctccgtcaaca 87
Query: 906 ccgtcgacaccaccggcgccggcgacgccttcgtcggctccctcctcgtcaacgtcgcca 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 ccgtcgacaccaccggcgccggcgacgccttcgtcggctccctcctcgtcaacgtcgcca 147
Query: 966 aggacgactccatcttccacaacgaggagaagctccgcgaggctctcaagttctccaacg 1025
|||||||||||||||||||||||||||||||||| | ||||| ||||||||||| ||||
Sbjct: 148 aggacgactccatcttccacaacgaggagaagctgagggaggcgctcaagttctcgaacg 207
Query: 1026 cctgcggcgccatctgcaccaccaagaagggcgccatcccggcgctgcccacggtcgcca 1085
| ||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 208 cgtgcggacccatctgcaccaccaagaagggtgccatcccggcgctgcccaccgtcgccg 267
Query: 1086 ccgcccaggacctcatc 1102
||| ||||| ||||||
Sbjct: 268 tcgcgcaggagctcatc 284
>gb|AU032758.1|AU032758 AU032758 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S14021_1A, mRNA sequence
Length = 377
Score = 301 bits (152), Expect = 6e-079
Identities = 230/258 (89%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 120 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtngccggcgt 179
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||| | |||||||||| ||||||||||||||
Sbjct: 180 ctcgctggccgagtccggcggcttcgtcaagnctnccggcggcgcccccgccaacgtcgc 239
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 240 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 299
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcct 396
|||||||||||| | ||| ||||||||||| ||||| |||||| |||||||||||||
Sbjct: 300 gttcgggcacatnctngtggacatcctgaagaagaacggggtgaacgcggaggggtgcct 359
Query: 397 gttcgacaagcacgcgcg 414
|| |||| ||||||||||
Sbjct: 360 gtncgacgagcacgcgcg 377
>gb|AU095053.1|AU095053 AU095053 Rice immature leaf including apical meristem (under long
day condition) Oryza sativa (japonica cultivar-group)
cDNA clone E51016, mRNA sequence
Length = 378
Score = 299 bits (151), Expect = 2e-078
Identities = 248/279 (88%), Gaps = 2/279 (0%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||| ||||||||||||||| |||||||||||||||||||| |||||||| ||||| |
Sbjct: 64 caaccnggtggtgtcgttcggggagatgctgatcgacttcgttcccgacgtcgccggcgt 123
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||| ||||
Sbjct: 124 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacntcgc 183
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 184 ctgcgccatcnccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 243
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcct 396
||||||||||||| ||||| ||||||||||| ||||| |||||| |||| |||||||
Sbjct: 244 gttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcgga-nggtgcct 302
Query: 397 gttcgacaagcacgcgcggacggcgctggccttcgtgac 435
||||||| |||||||||| |||| |||||| ||||||||
Sbjct: 303 gttcgacgagcacgcgcgcacgg-gctggcgttcgtgac 340
>gb|D46917.1|D46917 RICS11878A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 360
Score = 295 bits (149), Expect = 4e-077
Identities = 217/240 (90%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 121 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 180
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 181 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 240
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 241 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 300
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcct 396
||||||||||||| ||||| ||||||||||| ||||| || ||| |||||||||||||
Sbjct: 301 gttcgggcacatgctggtggacatcctgaagaagaacggggtnaacgcggaggggtgcct 360
>gb|AU166083.1|AU166083 AU166083 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E31141, mRNA sequence
Length = 465
Score = 289 bits (146), Expect = 2e-075
Identities = 234/264 (88%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 131 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 190
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 191 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 250
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 251 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 310
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcct 396
||||||||||||| ||||| ||||||||||| ||||| || ||| |||| ||||||||
Sbjct: 311 gttcgggcacatgctggtggacatcctgaagaagaacggggtnaacgcggaagggtgcct 370
Query: 397 gttcgacaagcacgcgcggacggc 420
||| || | || ||||| |||||
Sbjct: 371 tttccacgaacangcgcgcacggc 394
>gb|AU166211.1|AU166211 AU166211 Rice immature leaf including apical meristem (under long
day condition) Oryza sativa (japonica cultivar-group)
cDNA clone E50860, mRNA sequence
Length = 369
Score = 289 bits (146), Expect = 2e-075
Identities = 221/247 (89%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 121 caaccnggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 180
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||| ||||
Sbjct: 181 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacntcgc 240
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 241 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 300
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcct 396
|||||||||||| ||||| ||||||||||| ||||| |||||| |||| ||||||||
Sbjct: 301 gttcgggcacatnctggtggacatcctgaagaagaacggggtgaacgcggaagggtgcct 360
Query: 397 gttcgac 403
|||||||
Sbjct: 361 gttcgac 367
>gb|D24795.1|D24795 RICR2570A Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2570_1A, mRNA sequence
Length = 363
Score = 285 bits (144), Expect = 4e-074
Identities = 217/240 (90%), Gaps = 1/240 (0%)
Strand = Plus / Plus
Query: 158 aacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggctg 217
|||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 124 aacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgtc 183
Query: 218 tcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcc 277
|||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 184 tcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgcc 243
Query: 278 tgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacgag 337
||||||||| |||||||||| || ||||||||||||||||||||||| || || || |||
Sbjct: 244 tgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatgag 303
Query: 338 ttcgggcacatgttggt-gaacatcctgaagcagaacaacgtgaactcggaggggtgcct 396
|||||||||||| |||| | ||||||||||| ||||| |||||| |||||||||||||
Sbjct: 304 ttcgggcacatgctggtgggacatcctgaagaagaacggggtgaacgcggaggggtgcct 363
>gb|D46630.1|D46630 RICS11421A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 356
Score = 281 bits (142), Expect = 6e-073
Identities = 198/217 (91%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 121 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 180
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 181 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgnccccgccaacgtcgc 240
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 241 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 300
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaac 373
||||||||||||| ||||| ||||||||||| |||||
Sbjct: 301 gttcgggcacatgctggtggacatcctgaagaagaac 337
>gb|D46942.1|D46942 RICS11919A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 373
Score = 281 bits (142), Expect = 6e-073
Identities = 212/236 (89%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 121 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 180
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 181 ctcgctggccgagtccggcggcttcgtcaaggctnccggcggcgcccccgccaacgtcgc 240
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||| ||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 241 ctgcnccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 300
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggt 392
||||||||||||| ||||| ||||||||||| ||||| |||||| |||||||||
Sbjct: 301 gttcgggcacatgctggtggacatcctgaagaagaacggggtgaacgcggaggggt 356
>gb|D24809.1|D24809 RICR2590A Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2590_1A, mRNA sequence
Length = 328
Score = 281 bits (142), Expect = 6e-073
Identities = 198/217 (91%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 111 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 170
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 171 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 230
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 231 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 290
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaac 373
||||||||||||| ||||| |||| |||||| |||||
Sbjct: 291 gttcgggcacatgctggtggacatnctgaagaagaac 327
>gb|D41917.1|D41917 RICS4923A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 423
Score = 280 bits (141), Expect = 2e-072
Identities = 233/260 (89%), Gaps = 3/260 (1%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 121 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 180
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| |||||||||| |||| |||||||||
Sbjct: 181 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcg-gccccgcaacgtcgc 239
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 240 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 299
Query: 337 gttcgggcacatg-ttggtgaacatcctgaagcagaacaacgtgaa-ctcggaggggtgc 394
||||||||||||| |||||| ||||||||||| ||||| ||||| | |||||||||||
Sbjct: 300 gttcgggcacatgcttggtggacatcctgaagaagaacggggtgaaccgcggaggggtgc 359
Query: 395 ctgttcgacaagcacgcgcg 414
||||||||| |||||| |||
Sbjct: 360 ctgttcgacgagcacgngcg 379
>gb|D47081.1|D47081 RICS12195A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 355
Score = 274 bits (138), Expect = 1e-070
Identities = 197/217 (90%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 123 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 182
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 183 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 242
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || ||
Sbjct: 243 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatga 302
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaac 373
|||||||||||| ||||| ||||||| ||| |||||
Sbjct: 303 gttcgggcacatactggtggacatcctnaagaagaac 339
>gb|AU032285.1|AU032285 AU032285 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3844_1A, mRNA sequence
Length = 333
Score = 274 bits (138), Expect = 1e-070
Identities = 277/324 (85%), Gaps = 1/324 (0%)
Strand = Plus / Plus
Query: 351 tggtgaacatcctgaagcagaacaacgtgaactcggaggggtgcctgttcgacaagcacg 410
||||| ||||||||||| ||||| |||||| ||||||||||||||| |||| ||||||
Sbjct: 3 tggtggacatcctgaagaagaacggggtgaacgcggaggggtgcctgtacgacgagcacg 62
Query: 411 cgcggacggcgctggccttcgtgacgctcaagcacgacggggagcgcgagttcatgttct 470
|||| |||||||||| |||||||| | || | |||| |||||||||||||||||||
Sbjct: 63 cgcgcncggcgctggcgttcgtgaccntgaaaagcaacggcgagcgcgagttcatgttct 122
Query: 471 acaggaacccgagcgcggacatgctgctgacggaggcggagctggacctgggcctggtgc 530
|| ||||||||||||| |||||||| |||||||||||||| | |||||| |||| | |
Sbjct: 123 accggaacccgagcgccgacatgctcctgacggaggcggan-tcaacctggacctgatcc 181
Query: 531 ggcgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcgg 590
||||||||| | | |||||||||||||||||||| |||||| |||||||||||||||| |
Sbjct: 182 ggcgcgccaagatcttccactacggctccatctccctcatcaccgagccgtgccgctccg 241
Query: 591 cgcacatggccgccatgcgcgcagccaaggccgcgggcgtgctctgctcctacgacccca 650
| ||| | |||||||||||||| |||||| | || ||| | |||||||||||||||||||
Sbjct: 242 cccacgtngccgccatgcgcgcngccaagtcggccggcatcctctgctcctacgacccca 301
Query: 651 acgtgcgcctcccgctctggccgt 674
|||| ||| | |||||||||||||
Sbjct: 302 acgtccgcnttccgctctggccgt 325
>gb|AU097429.1|AU097429 AU097429 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S4923, mRNA sequence
Length = 552
Score = 266 bits (134), Expect = 3e-068
Identities = 234/266 (87%), Gaps = 1/266 (0%)
Strand = Plus / Plus
Query: 530 cggcgcgccagggtgttccactacggctccatctcgctcatctccgagccgtgccgctcg 589
|||||||||| | | |||||||||||||||||||| |||||| ||||||||||||| ||
Sbjct: 12 cggcgcgccaagatcttccactacggctccatctccctcatcaccgagccgtgccg-tcc 70
Query: 590 gcgcacatggccgccatgcgcgcagccaaggccgcgggcgtgctctgctcctacgacccc 649
|| ||| | |||||||||||||| |||||| | || ||| | ||||||||||||||||||
Sbjct: 71 gcccacgtcgccgccatgcgcgccgccaagtcggccggcatcctctgctcctacgacccc 130
Query: 650 aacgtgcgcctcccgctctggccgtcgcccgacgccgcacgcgagggcatcctcagcatc 709
||||| |||||||||||||||||||| |||||||| |||| ||||||||| ||||
Sbjct: 131 aacgtccgcctcccgctctggccgtccgaggacgccgcccgcgccggcatcctctccatc 190
Query: 710 tggaaggaggccgacttcatcaaggtcagcgacgacgaggtggccttcctcacgcgcggg 769
|||||||||||||||||||||||||| |||||||||||||| ||||||||||| | ||
Sbjct: 191 tggaaggaggccgacttcatcaaggtgagcgacgacgaggtcgccttcctcacccagggc 250
Query: 770 gacgccaacgacgagaagaacgtgct 795
||||||||||||||||||||||||||
Sbjct: 251 gacgccaacgacgagaagaacgtgct 276
>gb|D41921.1|D41921 RICS4929A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 394
Score = 254 bits (128), Expect = 1e-064
Identities = 194/217 (89%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 134 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgttgccggcgt 193
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||| ||||||| ||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 194 ctcgctgnccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtagc 253
Query: 277 ctgcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacga 336
|||||||||| |||||||||| || ||||||||||||||||||||||| || || || |
Sbjct: 254 ctgcgccatctccaagctcggtggctcctccgccttcgtcggcaagtttggtgatgatna 313
Query: 337 gttcgggcacatgttggtgaacatcctgaagcagaac 373
|||||||||||| ||||| |||| |||||| |||||
Sbjct: 314 gttcgggcacatactggtggacatnctgaagaagaac 350
>gb|C73520.1|C73520 C73520 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E4301_1A, mRNA sequence
Length = 340
Score = 242 bits (122), Expect = 5e-061
Identities = 258/296 (87%), Gaps = 8/296 (2%)
Strand = Plus / Plus
Query: 775 caacgacgagaagaacgtgctgtccctgtggtttgacgggctcaagctgctcgtcgtcac 834
|||||||||||| |||||||| || | ||||| ||||| |||||||| ||| |||||||
Sbjct: 21 caacgacgagaaaaacgtgctctcg-tctggttcgacgg-ctcaagctcctcatcgtcac 78
Query: 835 cgacggggacaagggatgcaggtacttcaccaaggacttcaagggcagcgtgcccggctt 894
|||||| || |||||||||||||||||||||||||||||||| ||| ||| ||||||||
Sbjct: 79 cgacggcgagaagggatgcaggtacttcaccaaggacttcaanggctccgtccccggctt 138
Query: 895 caaggtcgacaccgtcgacaccaccggcgccggcgacgccttcgtcggctccctcctcgt 954
| ||| ||| ||||||||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 139 ctccgtcaacancgtcgacaccancggcgccggcgacg-cttcgtcggctcccncctcgt 197
Query: 955 caacgtcgccaaggacgactccatcttccacaacgaggagaagctccgcgaggctctcaa 1014
|||||||||||||||||||||||||||| ||||||||||||||| | ||||| ||||
Sbjct: 198 caacgtcgccaaggacgactccatcttc--caacgaggagaagctgagggaggc-gtcaa 254
Query: 1015 gttctccaacgcctgcggcgccatc-tgcaccaccaagaagggcgccatcccggcg 1069
|||||| ||||| ||||| | |||| |||||||||||||| || |||||| |||||
Sbjct: 255 gttctcgaacgcgtgcggag-catcttgcaccaccaagaaaggtgccatcncggcg 309
>gb|D24237.1|D24237 RICR1565A Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R1565_1A, mRNA sequence
Length = 360
Score = 230 bits (116), Expect = 2e-057
Identities = 204/235 (86%), Gaps = 1/235 (0%)
Strand = Plus / Plus
Query: 159 acctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggctgt 218
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | |
Sbjct: 127 acctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgtct 186
Query: 219 cgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgcct 278
|| |||||||||| ||||| |||||||||| |||||||||| |||| |||||||| ||
Sbjct: 187 cgntggccgagtccggcggnttcgtcaaggntcccggcggcgnccccg-caacgtcgnct 245
Query: 279 gcgccatcgccaagctcggcggatcctccgccttcgtcggcaagttcggcgacgacgagt 338
||||||| ||||| |||| || ||||||| ||||||||||||||| || || || ||||
Sbjct: 246 gcgccatntccaagntcggtggntcctccgtcttcgtcggcaagtttggtgatgatgagt 305
Query: 339 tcgggcacatgttggtgaacatcctgaagcagaacaacgtgaactcggaggggtg 393
|||||||||| |||||| ||||||||||| ||||| |||||| ||||||||||
Sbjct: 306 tcgggcacatnttggtggacatcctgaagaagaacggggtgaacgcggaggggtg 360
>gb|AU070143.1|AU070143 AU070143 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E51172_1A, mRNA sequence
Length = 314
Score = 194 bits (98), Expect = 1e-046
Identities = 138/152 (90%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 124 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 183
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| |||| ||||||||
Sbjct: 184 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgncaacgtcga 243
Query: 277 ctgcgccatcgccaagctcggcggatcctccg 308
|| ||||||| |||||||||| || |||||||
Sbjct: 244 ctncgccatctccaagctcggtggctcctccg 275
>gb|AU064481.2|AU064481 AU064481 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E31508_1A, mRNA sequence
Length = 236
Score = 165 bits (83), Expect = 9e-038
Identities = 113/124 (91%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||| ||| |||||||||| ||||| |||||||||||| ||||| |
Sbjct: 113 caacctggtggtgtcgtncggggagatgctgancgactncgtccccgacgtcgccggcgt 172
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccgccaacgtcgc 276
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 173 ctcgctggccgagtccggcggcttcgtcaaggctcccggcggcgcccccgccaacgtcgc 232
Query: 277 ctgc 280
||||
Sbjct: 233 ctgc 236
>gb|C25146.2|C25146 C25146 Rice shoot Oryza sativa (japonica cultivar-group) cDNA clone
S5425_2A, mRNA sequence
Length = 272
Score = 133 bits (67), Expect = 3e-028
Identities = 105/117 (89%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 966 aggacgactccatcttccacaacgaggagaagctccgcgaggctctcaagttctccaacg 1025
||||||||||||||||||||||| |||||||||| | ||||| ||||||||||| ||||
Sbjct: 1 aggacgactccatcttccacaacnaggagaagctgagggaggcgctcaagttctcgaacg 60
Query: 1026 cctgcggcgccatctgcaccaccaagaagggcgccatcccggcgctgcccacggtcg 1082
| ||||| | ||||||||||||||||||||| ||||||||||||||| |||| ||||
Sbjct: 61 cgtgcggag-catctgcaccaccaagaagggtgccatcccggcgctgnccaccgtcg 116
>gb|D41344.1|D41344 RICS3811A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 217
Score = 131 bits (66), Expect = 1e-027
Identities = 98/110 (89%)
Strand = Plus / Plus
Query: 157 caacctggtggtgtcgttcggcgagatgctgatcgacttcgtccccgacgtggccgggct 216
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
Sbjct: 108 caacctggtggtgtcgttcggggagatgctgatcgacttcgtccccgacgtcgccggcgt 167
Query: 217 gtcgctggccgagtcgggcggcttcgtcaaggcccccggcggcgcgcccg 266
|||||||||||||| |||| |||||| ||| ||||||||||| ||||
Sbjct: 168 ctcgctggccgagtccggcgncttcgtnaagnntcccggcggcgcccccg 217
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,540,572
Number of Sequences: 438736
Number of extensions: 2540572
Number of successful extensions: 26969
Number of sequences better than 0.5: 89
Number of HSP's better than 0.5 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 25762
Number of HSP's gapped (non-prelim): 1168
length of query: 1549
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1528
effective length of database: 2,791,206,460
effective search space: 4264963470880
effective search space used: 4264963470880
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)