BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAO3g02.yg.2.1
(344 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB672286.1|CB672286 OSJNEe06D23.r OSJNEe Oryza sativa (j... 131 3e-028
gb|CB643754.1|CB643754 OSJNEb04J24.r OSJNEb Oryza sativa (j... 123 6e-026
gb|CB650079.1|CB650079 OSJNEb14F12.r OSJNEb Oryza sativa (j... 123 6e-026
gb|CB657181.1|CB657181 OSJNEc12F03.r OSJNEc Oryza sativa (j... 123 6e-026
gb|CB657223.1|CB657223 OSJNEc12G05.r OSJNEc Oryza sativa (j... 123 6e-026
gb|CB657871.1|CB657871 OSJNEc13I06.r OSJNEc Oryza sativa (j... 123 6e-026
gb|CB660299.1|CB660299 OSJNEd01O12.r OSJNEd Oryza sativa (j... 123 6e-026
gb|CB660390.1|CB660390 OSJNEd02B07.r OSJNEd Oryza sativa (j... 123 6e-026
gb|CB660781.1|CB660781 OSJNEd02N17.r OSJNEd Oryza sativa (j... 123 6e-026
gb|CB662978.1|CB662978 OSJNEd07H14.f OSJNEd Oryza sativa (j... 123 6e-026
gb|CB662979.1|CB662979 OSJNEd07H14.r OSJNEd Oryza sativa (j... 123 6e-026
gb|CB663092.1|CB663092 OSJNEd07L03.f OSJNEd Oryza sativa (j... 123 6e-026
gb|CB663093.1|CB663093 OSJNEd07L03.r OSJNEd Oryza sativa (j... 123 6e-026
gb|CB665389.1|CB665389 OSJNEd11M06.f OSJNEd Oryza sativa (j... 123 6e-026
gb|CB665390.1|CB665390 OSJNEd11M06.r OSJNEd Oryza sativa (j... 123 6e-026
gb|CB665634.1|CB665634 OSJNEd12C17.r OSJNEd Oryza sativa (j... 123 6e-026
gb|CB668340.1|CB668340 OSJNEd16C12.r OSJNEd Oryza sativa (j... 123 6e-026
gb|CB669054.1|CB669054 OSJNEe01E06.r OSJNEe Oryza sativa (j... 123 6e-026
gb|CB672596.1|CB672596 OSJNEe06L08.r OSJNEe Oryza sativa (j... 123 6e-026
gb|CB672730.1|CB672730 OSJNEe06O16.r OSJNEe Oryza sativa (j... 123 6e-026
gb|CB673345.1|CB673345 OSJNEe07N04.r OSJNEe Oryza sativa (j... 123 6e-026
gb|CB673658.1|CB673658 OSJNEe08E17.r OSJNEe Oryza sativa (j... 123 6e-026
gb|CB675652.1|CB675652 OSJNEe11I08.r OSJNEe Oryza sativa (j... 123 6e-026
gb|CF321633.1|CF321633 HD--12-P07.b1 OsHDAC1-overexpressing... 123 6e-026
gb|CF322768.1|CF322768 HDN--02-A06.g1 OsHDAC1-overexpressin... 123 6e-026
dbj|AK062155.1| Oryza sativa (japonica cultivar-group) cDNA... 123 6e-026
dbj|AK068005.1| Oryza sativa (japonica cultivar-group) cDNA... 123 6e-026
gb|CF310830.1|CF310830 ABF--05-L11.b1 ABF3-overexpressing t... 121 3e-025
gb|CF311216.1|CF311216 ABF--06-F17.b1 ABF3-overexpressing t... 121 3e-025
gb|CB667560.1|CB667560 OSJNEd14P03.r OSJNEd Oryza sativa (j... 119 1e-024
gb|CB674460.1|CB674460 OSJNEe09I08.r OSJNEe Oryza sativa (j... 119 1e-024
gb|CB677077.1|CB677077 OSJNEe13L03.r OSJNEe Oryza sativa (j... 119 1e-024
gb|AY574990.1| Oryza sativa (japonica cultivar-group) zinc ... 119 1e-024
ref|NM_191787.1| Oryza sativa (japonica cultivar-group), p... 117 4e-024
gb|CB644338.1|CB644338 OSJNEb05I01.r OSJNEb Oryza sativa (j... 115 2e-023
gb|CB677076.1|CB677076 OSJNEe13L03.f OSJNEe Oryza sativa (j... 115 2e-023
gb|CF322854.1|CF322854 HDN--02-E04.g1 OsHDAC1-overexpressin... 115 2e-023
gb|AACV01002243.1| Oryza sativa (japonica cultivar-group) c... 109 1e-021
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 109 1e-021
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 109 1e-021
dbj|AP003453.3| Oryza sativa (japonica cultivar-group) geno... 109 1e-021
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 109 1e-021
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 109 1e-021
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 109 1e-021
gb|C72284.1|C72284 C72284 Rice panicle at flowering stage O... 92 2e-016
gb|C96813.1|C96813 C96813 Rice callus Oryza sativa (japonic... 92 2e-016
gb|CB652280.1|CB652280 OSJNEc02A02.r OSJNEc Oryza sativa (j... 92 2e-016
gb|CB660780.1|CB660780 OSJNEd02N17.f OSJNEd Oryza sativa (j... 92 2e-016
gb|CF324145.1|CF324145 HDN--05-L24.g1 OsHDAC1-overexpressin... 92 2e-016
gb|AU077443.1|AU077443 AU077443 Rice callus Oryza sativa (j... 86 1e-014
gb|CB636432.1|CB636432 OSJNEa01O24.r OSJNEa Oryza sativa (j... 80 9e-013
gb|CB662001.1|CB662001 OSJNEd05J09.r OSJNEd Oryza sativa (j... 76 1e-011
gb|CB663056.1|CB663056 OSJNEd07J17.f OSJNEd Oryza sativa (j... 74 5e-011
gb|CB663057.1|CB663057 OSJNEd07J17.r OSJNEd Oryza sativa (j... 74 5e-011
gb|AU097088.1|AU097088 AU097088 Rice shoot Oryza sativa (ja... 66 1e-008
gb|CB674459.1|CB674459 OSJNEe09I08.f OSJNEe Oryza sativa (j... 54 5e-005
>gb|CB672286.1|CB672286 OSJNEe06D23.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe06D23 3', mRNA sequence
Length = 830
Score = 131 bits (66), Expect = 3e-028
Identities = 114/132 (86%)
Strand = Plus / Minus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 793 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 734
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 733 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 674
Query: 310 nagatttgaagt 321
|||||||||||
Sbjct: 673 cagatttgaagt 662
>gb|CB643754.1|CB643754 OSJNEb04J24.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb04J24 3', mRNA sequence
Length = 855
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 752 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 693
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 692 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 633
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 632 cagatctgaagt 621
Score = 44.1 bits (22), Expect = 0.048
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 87 agaaatggaagagcactgccagtttgcatgccccctttgctc 128
||||||||| ||||||||||| ||||| |||| ||||||||
Sbjct: 855 agaaatggaggagcactgccaatttgctggcccgctttgctc 814
>gb|CB650079.1|CB650079 OSJNEb14F12.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb14F12 3', mRNA sequence
Length = 876
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 675 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 616
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 615 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 556
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 555 cagatctgaagt 544
Score = 91.7 bits (46), Expect = 2e-016
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 831 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 772
Query: 94 gaagagcactgccagtttgcatgccccctttgctc 128
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 771 gaggagcactgccaatttgcttgcccgctttgctc 737
>gb|CB657181.1|CB657181 OSJNEc12F03.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc12F03 3', mRNA sequence
Length = 801
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 714 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 655
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 654 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 595
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 594 cagatctgaagt 583
>gb|CB657223.1|CB657223 OSJNEc12G05.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc12G05 3', mRNA sequence
Length = 812
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 764 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 705
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 704 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 645
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 644 cagatctgaagt 633
>gb|CB657871.1|CB657871 OSJNEc13I06.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc13I06 3', mRNA sequence
Length = 794
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 675 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 616
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 615 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 556
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 555 cagatctgaagt 544
Score = 52.0 bits (26), Expect = 2e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 87 agaaatggaagagcactgccagtttgcatgccccctttgctc 128
||||||||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 778 agaaatggaggagcactgccaatttgcttgcccgctttgctc 737
>gb|CB660299.1|CB660299 OSJNEd01O12.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd01O12 3', mRNA sequence
Length = 824
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 737 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 678
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 677 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 618
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 617 cagatctgaagt 606
>gb|CB660390.1|CB660390 OSJNEd02B07.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd02B07 3', mRNA sequence
Length = 796
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 675 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 616
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 615 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 556
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 555 cagatctgaagt 544
Score = 56.0 bits (28), Expect = 1e-005
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 69 tcatgtaaagtgcctgaaagaaatggaagagcactgccagtttgcatgccccctttgctc 128
|||||| |||||| || ||||||||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 796 tcatgtcaagtgcttgcgagaaatggaggagcactgccaatttgcttgcccgctttgctc 737
>gb|CB660781.1|CB660781 OSJNEd02N17.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd02N17 3', mRNA sequence
Length = 844
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 713 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 654
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 653 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 594
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 593 cagatctgaagt 582
Score = 75.8 bits (38), Expect = 1e-011
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 59 gtcataccattcatgtaaagtgcctgaaagaaatggaagagcactgccagtttgcatgcc 118
|||||||||||||||| |||||| || ||||||||| ||||||||||| ||||| ||||
Sbjct: 844 gtcataccattcatgtcaagtgcttgcgagaaatggaggagcactgccaatttgcttgcc 785
Query: 119 ccctttgctc 128
| ||||||||
Sbjct: 784 cgctttgctc 775
>gb|CB662978.1|CB662978 OSJNEd07H14.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd07H14 5', mRNA sequence
Length = 808
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Plus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 523 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 582
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 583 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 642
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 643 cagatctgaagt 654
Score = 91.7 bits (46), Expect = 2e-016
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 367 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 426
Query: 94 gaagagcactgccagtttgcatgccccctttgctc 128
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 427 gaggagcactgccaatttgcttgcccgctttgctc 461
>gb|CB662979.1|CB662979 OSJNEd07H14.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd07H14 3', mRNA sequence
Length = 828
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 741 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 682
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 681 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 622
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 621 cagatctgaagt 610
>gb|CB663092.1|CB663092 OSJNEd07L03.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd07L03 5', mRNA sequence
Length = 834
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Plus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 310 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 369
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 370 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 429
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 430 cagatctgaagt 441
Score = 91.7 bits (46), Expect = 2e-016
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 154 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 213
Query: 94 gaagagcactgccagtttgcatgccccctttgctc 128
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 214 gaggagcactgccaatttgcttgcccgctttgctc 248
>gb|CB663093.1|CB663093 OSJNEd07L03.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd07L03 3', mRNA sequence
Length = 787
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 715 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 656
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 655 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 596
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 595 cagatctgaagt 584
>gb|CB665389.1|CB665389 OSJNEd11M06.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd11M06 5', mRNA sequence
Length = 815
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Plus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 466 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 525
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 526 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 585
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 586 cagatctgaagt 597
Score = 91.7 bits (46), Expect = 2e-016
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 310 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 369
Query: 94 gaagagcactgccagtttgcatgccccctttgctc 128
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 370 gaggagcactgccaatttgcttgcccgctttgctc 404
>gb|CB665390.1|CB665390 OSJNEd11M06.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd11M06 3', mRNA sequence
Length = 890
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 665 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 606
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 605 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 546
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 545 cagatctgaagt 534
Score = 91.7 bits (46), Expect = 2e-016
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 821 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 762
Query: 94 gaagagcactgccagtttgcatgccccctttgctc 128
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 761 gaggagcactgccaatttgcttgcccgctttgctc 727
>gb|CB665634.1|CB665634 OSJNEd12C17.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd12C17 3', mRNA sequence
Length = 877
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 756 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 697
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 696 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 637
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 636 cagatctgaagt 625
Score = 56.0 bits (28), Expect = 1e-005
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 69 tcatgtaaagtgcctgaaagaaatggaagagcactgccagtttgcatgccccctttgctc 128
|||||| |||||| || ||||||||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 877 tcatgtcaagtgcttgcgagaaatggaggagcactgccaatttgcttgcccgctttgctc 818
>gb|CB668340.1|CB668340 OSJNEd16C12.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd16C12 3', mRNA sequence
Length = 853
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 766 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 707
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 706 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 647
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 646 cagatctgaagt 635
>gb|CB669054.1|CB669054 OSJNEe01E06.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe01E06 3', mRNA sequence
Length = 833
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 757 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 698
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 697 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 638
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 637 cagatctgaagt 626
>gb|CB672596.1|CB672596 OSJNEe06L08.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe06L08 3', mRNA sequence
Length = 816
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 699 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 640
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 639 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 580
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 579 cagatctgaagt 568
Score = 52.0 bits (26), Expect = 2e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 87 agaaatggaagagcactgccagtttgcatgccccctttgctc 128
||||||||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 802 agaaatggaggagcactgccaatttgcttgcccgctttgctc 761
>gb|CB672730.1|CB672730 OSJNEe06O16.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe06O16 3', mRNA sequence
Length = 852
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 766 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 707
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 706 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 647
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 646 cagatctgaagt 635
>gb|CB673345.1|CB673345 OSJNEe07N04.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe07N04 3', mRNA sequence
Length = 753
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 714 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 655
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 654 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 595
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 594 cagatctgaagt 583
>gb|CB673658.1|CB673658 OSJNEe08E17.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe08E17 3', mRNA sequence
Length = 778
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 743 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 684
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 683 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 624
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 623 cagatctgaagt 612
>gb|CB675652.1|CB675652 OSJNEe11I08.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe11I08 3', mRNA sequence
Length = 815
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 545 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 486
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 485 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 426
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 425 cagatctgaagt 414
Score = 91.7 bits (46), Expect = 2e-016
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 701 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 642
Query: 94 gaagagcactgccagtttgcatgccccctttgctc 128
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 641 gaggagcactgccaatttgcttgcccgctttgctc 607
>gb|CF321633.1|CF321633 HD--12-P07.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--12-P07, mRNA sequence
Length = 612
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Plus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 281 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 340
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 341 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 400
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 401 cagatctgaagt 412
Score = 91.7 bits (46), Expect = 2e-016
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 125 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 184
Query: 94 gaagagcactgccagtttgcatgccccctttgctc 128
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 185 gaggagcactgccaatttgcttgcccgctttgctc 219
>gb|CF322768.1|CF322768 HDN--02-A06.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--02-A06, mRNA sequence
Length = 539
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Plus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 299 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 358
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 359 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 418
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 419 cagatctgaagt 430
Score = 91.7 bits (46), Expect = 2e-016
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 143 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 202
Query: 94 gaagagcactgccagtttgcatgccccctttgctc 128
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 203 gaggagcactgccaatttgcttgcccgctttgctc 237
>dbj|AK062155.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-H12, full
insert sequence
Length = 1692
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Plus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 1018 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 1077
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 1078 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 1137
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 1138 cagatctgaagt 1149
Score = 91.7 bits (46), Expect = 2e-016
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 862 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 921
Query: 94 gaagagcactgccagtttgcatgccccctttgctc 128
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 922 gaggagcactgccaatttgcttgcccgctttgctc 956
>dbj|AK068005.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130E06, full
insert sequence
Length = 1843
Score = 123 bits (62), Expect = 6e-026
Identities = 113/132 (85%)
Strand = Plus / Plus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 1135 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 1194
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 1195 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 1254
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 1255 cagatctgaagt 1266
Score = 91.7 bits (46), Expect = 2e-016
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 979 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 1038
Query: 94 gaagagcactgccagtttgcatgccccctttgctc 128
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 1039 gaggagcactgccaatttgcttgcccgctttgctc 1073
>gb|CF310830.1|CF310830 ABF--05-L11.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--05-L11, mRNA sequence
Length = 698
Score = 121 bits (61), Expect = 3e-025
Identities = 112/131 (85%)
Strand = Plus / Plus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 347 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 406
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 407 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 466
Query: 310 nagatttgaag 320
|||| |||||
Sbjct: 467 cagatctgaag 477
Score = 91.7 bits (46), Expect = 2e-016
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 191 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 250
Query: 94 gaagagcactgccagtttgcatgccccctttgctc 128
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 251 gaggagcactgccaatttgcttgcccgctttgctc 285
>gb|CF311216.1|CF311216 ABF--06-F17.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--06-F17, mRNA sequence
Length = 606
Score = 121 bits (61), Expect = 3e-025
Identities = 112/131 (85%)
Strand = Plus / Plus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 254 tctgacgcctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 313
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 314 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 373
Query: 310 nagatttgaag 320
|||| |||||
Sbjct: 374 cagatctgaag 384
Score = 91.7 bits (46), Expect = 2e-016
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 98 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 157
Query: 94 gaagagcactgccagtttgcatgccccctttgctc 128
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 158 gaggagcactgccaatttgcttgcccgctttgctc 192
>gb|CB667560.1|CB667560 OSJNEd14P03.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd14P03 3', mRNA sequence
Length = 671
Score = 119 bits (60), Expect = 1e-024
Identities = 99/114 (86%)
Strand = Plus / Minus
Query: 208 aaaatggtccgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttg 267
|||||||| |||||||| |||||||| || ||||||| |||||| |||||||||||||||
Sbjct: 482 aaaatggtgcgcatattgtgcaacgattgtggggcaacatcagaggtgcagttccatttg 423
Query: 268 attgcgcacaagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
|||||||||||||||||||| | || |||||| ||||| |||||||||||
Sbjct: 422 attgcgcacaagtgccagaagtgcaagtcctacaacccccgccagatttgaagt 369
Score = 83.8 bits (42), Expect = 6e-014
Identities = 81/95 (85%)
Strand = Plus / Minus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | ||||| |||||||||| |||||| || |||||||
Sbjct: 656 aatgatgtttccgtcttgccctgtggtcatcccattcatgtcaagtgcttgcgagaaatg 597
Query: 94 gaagagcactgccagtttgcatgccccctttgctc 128
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 596 gaggagcactgccaatttgcttgcccgctttgctc 562
>gb|CB674460.1|CB674460 OSJNEe09I08.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe09I08 3', mRNA sequence
Length = 762
Score = 119 bits (60), Expect = 1e-024
Identities = 111/130 (85%)
Strand = Plus / Minus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 533 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 474
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 473 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 414
Query: 310 nagatttgaa 319
|||| ||||
Sbjct: 413 cagatctgaa 404
Score = 91.7 bits (46), Expect = 2e-016
Identities = 82/95 (86%)
Strand = Plus / Minus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 689 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 630
Query: 94 gaagagcactgccagtttgcatgccccctttgctc 128
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 629 gaggagcactgccaatttgcttgcccgctttgctc 595
>gb|CB677077.1|CB677077 OSJNEe13L03.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe13L03 3', mRNA sequence
Length = 821
Score = 119 bits (60), Expect = 1e-024
Identities = 99/114 (86%)
Strand = Plus / Minus
Query: 208 aaaatggtccgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttg 267
|||||||| |||||||| |||||||| || ||||||| |||||| |||||||||||||||
Sbjct: 770 aaaatggtgcgcatattgtgcaacgattgtggggcaacatcagaggtgcagttccatttg 711
Query: 268 attgcgcacaagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
|||||||||||||||||||| | || |||||||||||| |||| ||||||
Sbjct: 710 attgcgcacaagtgccagaagtgcaagtcctacaacacccgccagatctgaagt 657
>gb|AY574990.1| Oryza sativa (japonica cultivar-group) zinc finger protein (Tranpr)
mRNA, complete cds
Length = 1393
Score = 119 bits (60), Expect = 1e-024
Identities = 99/114 (86%)
Strand = Plus / Plus
Query: 208 aaaatggtccgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttg 267
|||||||| |||||||| |||||||| || ||||||| |||||| |||||||||||||||
Sbjct: 846 aaaatggtgcgcatattgtgcaacgattgtggggcaacatcagaggtgcagttccatttg 905
Query: 268 attgcgcacaagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
|||||||||||||||||||| | || |||||||||||| |||| ||||||
Sbjct: 906 attgcgcacaagtgccagaagtgcaagtcctacaacacccgccagatctgaagt 959
Score = 91.7 bits (46), Expect = 2e-016
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 672 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 731
Query: 94 gaagagcactgccagtttgcatgccccctttgctc 128
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 732 gaggagcactgccaatttgcttgcccgctttgctc 766
>ref|NM_191787.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 900
Score = 117 bits (59), Expect = 4e-024
Identities = 107/125 (85%)
Strand = Plus / Plus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 772 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 831
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 832 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 891
Query: 310 nagat 314
||||
Sbjct: 892 cagat 896
Score = 91.7 bits (46), Expect = 2e-016
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 616 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 675
Query: 94 gaagagcactgccagtttgcatgccccctttgctc 128
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 676 gaggagcactgccaatttgcttgcccgctttgctc 710
>gb|CB644338.1|CB644338 OSJNEb05I01.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb05I01 3', mRNA sequence
Length = 739
Score = 115 bits (58), Expect = 2e-023
Identities = 112/132 (84%)
Strand = Plus / Minus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | ||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 704 tctgacacctgtgacaataaaatggggcgcatattgtgcaacgattgtggggcaacatca 645
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccgc 309
|| ||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 644 gaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccgc 585
Query: 310 nagatttgaagt 321
|||| ||||||
Sbjct: 584 cagatctgaagt 573
>gb|CB677076.1|CB677076 OSJNEe13L03.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe13L03 5', mRNA sequence
Length = 806
Score = 115 bits (58), Expect = 2e-023
Identities = 88/98 (89%)
Strand = Plus / Plus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 697 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 756
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaa 287
|| |||||||||||||||||||||||||||||||||||
Sbjct: 757 gaggtgcagttccatttgattgcgcacaagtgccagaa 794
Score = 91.7 bits (46), Expect = 2e-016
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 541 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 600
Query: 94 gaagagcactgccagtttgcatgccccctttgctc 128
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 601 gaggagcactgccaatttgcttgcccgctttgctc 635
>gb|CF322854.1|CF322854 HDN--02-E04.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--02-E04, mRNA sequence
Length = 646
Score = 115 bits (58), Expect = 2e-023
Identities = 88/98 (89%)
Strand = Plus / Plus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||||||| || ||||||| ||||
Sbjct: 526 tctgacacctgtgacaataaaatggtgcgcatattgtgcaacgattgtggggcaacatca 585
Query: 250 gatgtgcagttccatttgattgcgcacaagtgccagaa 287
|| |||||||||||||||||||||||||||||||||||
Sbjct: 586 gaggtgcagttccatttgattgcgcacaagtgccagaa 623
Score = 91.7 bits (46), Expect = 2e-016
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 370 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 429
Query: 94 gaagagcactgccagtttgcatgccccctttgctc 128
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 430 gaggagcactgccaatttgcttgcccgctttgctc 464
>gb|AACV01002243.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002243, whole
genome shotgun sequence
Length = 46304
Score = 109 bits (55), Expect = 1e-021
Identities = 91/105 (86%)
Strand = Plus / Minus
Query: 217 cgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttgattgcgcac 276
|||||||| |||||||| || ||||||| |||||| ||||||||||||||||||||||||
Sbjct: 39918 cgcatattgtgcaacgattgtggggcaacatcagaggtgcagttccatttgattgcgcac 39859
Query: 277 aagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
||||||||||| | || |||||||||||| |||| ||||||
Sbjct: 39858 aagtgccagaagtgcaagtcctacaacacccgccagatctgaagt 39814
Score = 77.8 bits (39), Expect = 3e-012
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 40443 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 40384
Query: 94 gaagagcactgccagt 109
|| |||||||||||||
Sbjct: 40383 gaggagcactgccagt 40368
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 109 bits (55), Expect = 1e-021
Identities = 91/105 (86%)
Strand = Plus / Minus
Query: 217 cgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttgattgcgcac 276
|||||||| |||||||| || ||||||| |||||| ||||||||||||||||||||||||
Sbjct: 30039920 cgcatattgtgcaacgattgtggggcaacatcagaggtgcagttccatttgattgcgcac 30039861
Query: 277 aagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
||||||||||| | || |||||||||||| |||| ||||||
Sbjct: 30039860 aagtgccagaagtgcaagtcctacaacacccgccagatctgaagt 30039816
Score = 77.8 bits (39), Expect = 3e-012
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 30040445 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 30040386
Query: 94 gaagagcactgccagt 109
|| |||||||||||||
Sbjct: 30040385 gaggagcactgccagt 30040370
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 109 bits (55), Expect = 1e-021
Identities = 91/105 (86%)
Strand = Plus / Minus
Query: 217 cgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttgattgcgcac 276
|||||||| |||||||| || ||||||| |||||| ||||||||||||||||||||||||
Sbjct: 4487303 cgcatattgtgcaacgattgtggggcaacatcagaggtgcagttccatttgattgcgcac 4487244
Query: 277 aagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
||||||||||| | || |||||||||||| |||| ||||||
Sbjct: 4487243 aagtgccagaagtgcaagtcctacaacacccgccagatctgaagt 4487199
Score = 77.8 bits (39), Expect = 3e-012
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 4487828 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 4487769
Query: 94 gaagagcactgccagt 109
|| |||||||||||||
Sbjct: 4487768 gaggagcactgccagt 4487753
>dbj|AP003453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0480C01
Length = 151100
Score = 109 bits (55), Expect = 1e-021
Identities = 91/105 (86%)
Strand = Plus / Minus
Query: 217 cgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttgattgcgcac 276
|||||||| |||||||| || ||||||| |||||| ||||||||||||||||||||||||
Sbjct: 103808 cgcatattgtgcaacgattgtggggcaacatcagaggtgcagttccatttgattgcgcac 103749
Query: 277 aagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
||||||||||| | || |||||||||||| |||| ||||||
Sbjct: 103748 aagtgccagaagtgcaagtcctacaacacccgccagatctgaagt 103704
Score = 77.8 bits (39), Expect = 3e-012
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 104333 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 104274
Query: 94 gaagagcactgccagt 109
|| |||||||||||||
Sbjct: 104273 gaggagcactgccagt 104258
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 109 bits (55), Expect = 1e-021
Identities = 91/105 (86%)
Strand = Plus / Minus
Query: 217 cgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttgattgcgcac 276
|||||||| |||||||| || ||||||| |||||| ||||||||||||||||||||||||
Sbjct: 4421490 cgcatattgtgcaacgattgtggggcaacatcagaggtgcagttccatttgattgcgcac 4421431
Query: 277 aagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
||||||||||| | || |||||||||||| |||| ||||||
Sbjct: 4421430 aagtgccagaagtgcaagtcctacaacacccgccagatctgaagt 4421386
Score = 77.8 bits (39), Expect = 3e-012
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 4422015 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 4421956
Query: 94 gaagagcactgccagt 109
|| |||||||||||||
Sbjct: 4421955 gaggagcactgccagt 4421940
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 109 bits (55), Expect = 1e-021
Identities = 91/105 (86%)
Strand = Plus / Minus
Query: 217 cgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttgattgcgcac 276
|||||||| |||||||| || ||||||| |||||| ||||||||||||||||||||||||
Sbjct: 29623211 cgcatattgtgcaacgattgtggggcaacatcagaggtgcagttccatttgattgcgcac 29623152
Query: 277 aagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
||||||||||| | || |||||||||||| |||| ||||||
Sbjct: 29623151 aagtgccagaagtgcaagtcctacaacacccgccagatctgaagt 29623107
Score = 77.8 bits (39), Expect = 3e-012
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 29623736 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 29623677
Query: 94 gaagagcactgccagt 109
|| |||||||||||||
Sbjct: 29623676 gaggagcactgccagt 29623661
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 109 bits (55), Expect = 1e-021
Identities = 91/105 (86%)
Strand = Plus / Minus
Query: 217 cgcatattatgcaacgactgcggggcaatatcagatgtgcagttccatttgattgcgcac 276
|||||||| |||||||| || ||||||| |||||| ||||||||||||||||||||||||
Sbjct: 29959250 cgcatattgtgcaacgattgtggggcaacatcagaggtgcagttccatttgattgcgcac 29959191
Query: 277 aagtgccagaatnnnnantcatacaacacccgcnagatttgaagt 321
||||||||||| | || |||||||||||| |||| ||||||
Sbjct: 29959190 aagtgccagaagtgcaagtcctacaacacccgccagatctgaagt 29959146
Score = 77.8 bits (39), Expect = 3e-012
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 29959775 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 29959716
Query: 94 gaagagcactgccagt 109
|| |||||||||||||
Sbjct: 29959715 gaggagcactgccagt 29959700
>gb|C72284.1|C72284 C72284 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1361_1A, mRNA sequence
Length = 461
Score = 91.7 bits (46), Expect = 2e-016
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 138 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 197
Query: 94 gaagagcactgccagtttgcatgccccctttgctc 128
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 198 gaggagcactgccaatttgcttgcccgctttgctc 232
Score = 87.7 bits (44), Expect = 4e-015
Identities = 106/126 (84%), Gaps = 2/126 (1%)
Strand = Plus / Plus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcgggg-caatatc 248
|||||| ||||||| | |||||||| |||||||| |||| ||| || |||| ||| |||
Sbjct: 294 tctgacacctgtgacaataaaatggtgcgcatattgtgca-cgattgtgggggcaacatc 352
Query: 249 agatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantcatacaacacccg 308
||| ||||||||||||||||||||||||||||||||||| | || |||||||||||
Sbjct: 353 agaggtgcagttccatttgattgcgcacaagtgccagaagtgcaagtcctacaacacccg 412
Query: 309 cnagat 314
| ||||
Sbjct: 413 ccagat 418
>gb|C96813.1|C96813 C96813 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C11207_2A, mRNA sequence
Length = 433
Score = 91.7 bits (46), Expect = 2e-016
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 188 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 247
Query: 94 gaagagcactgccagtttgcatgccccctttgctc 128
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 248 gaggagcactgccaatttgcttgcccgctttgctc 282
Score = 69.9 bits (35), Expect = 8e-010
Identities = 79/91 (86%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 190 tctgactcctgtgatcacaaaatggtccgcatattatgcaacgactgcggggcaatatca 249
|||||| ||||||| | |||||||| |||||||| |||| ||| || ||||||| ||||
Sbjct: 344 tctgacacctgtgacaataaaatggtgcgcatattgtgca-cgattgtggggcaacatca 402
Query: 250 gatgtgcagttcca-tttgattgcgcacaag 279
|| ||||||||||| ||||||||||||||||
Sbjct: 403 gaggtgcagttccattttgattgcgcacaag 433
>gb|CB652280.1|CB652280 OSJNEc02A02.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc02A02 3', mRNA sequence
Length = 599
Score = 91.7 bits (46), Expect = 2e-016
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 226 tgcaacgactgcggggcaatatcagatgtgcagttccatttgattgcgcacaagtgccag 285
|||||||| || ||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 596 tgcaacgattgtggggcaacatcagaggtgcagttccatttgattgcgcacaagtgccag 537
Query: 286 aa 287
||
Sbjct: 536 aa 535
>gb|CB660780.1|CB660780 OSJNEd02N17.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd02N17 5', mRNA sequence
Length = 840
Score = 91.7 bits (46), Expect = 2e-016
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 714 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 773
Query: 94 gaagagcactgccagtttgcatgccccctttgctc 128
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 774 gaggagcactgccaatttgcttgcccgctttgctc 808
>gb|CF324145.1|CF324145 HDN--05-L24.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--05-L24, mRNA sequence
Length = 609
Score = 91.7 bits (46), Expect = 2e-016
Identities = 82/95 (86%)
Strand = Plus / Plus
Query: 34 aatgatgtttccgtcctgccttnnngtcataccattcatgtaaagtgcctgaaagaaatg 93
||||||||||||||| |||| | |||||||||||||||| |||||| || |||||||
Sbjct: 503 aatgatgtttccgtcttgccctgtggtcataccattcatgtcaagtgcttgcgagaaatg 562
Query: 94 gaagagcactgccagtttgcatgccccctttgctc 128
|| ||||||||||| ||||| ||||| ||||||||
Sbjct: 563 gaggagcactgccaatttgcttgcccgctttgctc 597
>gb|AU077443.1|AU077443 AU077443 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C12946_8Z, mRNA sequence
Length = 713
Score = 85.7 bits (43), Expect = 1e-014
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 238 ggggcaatatcagatgtgcagttccatttgattgcgcacaagtgccagaatnnnnantca 297
||||||| |||||| |||||||||||||||||||||||||||||||||| | ||
Sbjct: 24 ggggcaacatcagagntgcagttccatttgattgcgcacaagtgccagaagtgcaagtcc 83
Query: 298 tacaacacccgcnagatttgaagt 321
|||||||||||| |||| ||||||
Sbjct: 84 tacaacacccgccagatctgaagt 107
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 246,091
Number of Sequences: 438736
Number of extensions: 246091
Number of successful extensions: 4468
Number of sequences better than 0.5: 56
Number of HSP's better than 0.5 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4306
Number of HSP's gapped (non-prelim): 112
length of query: 344
length of database: 2,800,419,916
effective HSP length: 20
effective length of query: 324
effective length of database: 2,791,645,196
effective search space: 904493043504
effective search space used: 904493043504
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)